MD17G1202800.v1.1

Chaperone protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
24515871 .. 24522600
6730 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1202800.v1.1.491

Sequence Viewer

Length: 1341 bp
ATGGCGATTATTCATTGTGGAAGTACATGGGTTACTCAATGGGGCATTCGTCCTCAGACTATGCTAAGGCCCTGTGCCATAAACAAGGTCCTCACATCCCAATGTTGTGTTTCAAGCAAAATAGGATATTTGGGGGCACCAAGTTCAAGCTTGTTCTCTCGGGATTCCTTGAATGCTCTATTCTGTGCAGGCCCATCTCAAACTTCACATCGTAGCAGGGGAGCACGATTTATAGTTAGAGCAGATGCTGACTTTTATTCTGTTCTTGGGGTGTCAAGAAATGCGAGTAAATCAGAAATTAAAAGCGCTTATCGGAAGCTTGCAAGAAGTTATCATCCAGATGTAAACAAAGAACCCGGGGCAGAAACAAAATTCAAGGAAATCAGTAATGCATACGAGGTCTTGTCTGATGATGAAAAACGATCACTATATGACAAGTATGGAGAGGCTGGAATTAAAGGTGCTGGTATGGGTACGGGGGATTTCAGCAATCCATTTGATCTGTTCGAGTCCCTATTTGAGGGCATGGGCGGTATGGGTGGGATGGGTGGTATGGGCGGAATGGGGGGGCGAGGTTCTAGGAGTCGAGCGGTTGATGGCCAGGATGAATATTATAATCTTGTGTTGAACTTCAAGGAAGCAGTTTTTGGGGTTGAAAAGGAGATTGAAATTAGCCGGTTGGAGAGCTGCGGGACTTGCAATGGTTCTGGTGCTAAACCAGGCACCAAGGCATCCACATGCAGCACATGTGGTGGGCAAGGTCAGGTGGTTCAATCAGCAAGGACTCCGTTAGGTGTATTCCAACAGGTTATGACATGCTCATCATGCGGTGGGACTGGGGAAACATCAACCCCTTGTAACACTTGCTCTGGGGATGGTCGGGTGAGGAGGACAAAGCGGATCAGTCTGAAGGTTCCTGCTGGTGTGGACTCTGGGAGCCGTTTAAGAGTCCGAAATGAAGGTAATGCTGGAAGGCGGGGCGGGTCTCCTGGTGACCTATTTGTTATTATAGATGTCATCTCAGACCCTGTCCTCAAACGTGATGATACCAACATATTGTACACCTGCAAGGTATCCTATATAGATGCAATATTGGGGACTACGATTAAGGTTCCATCAGTCGATGGGATGGTTGATTTGAAGATTCCAGCTGGTACCCAACCGAACACAACCCTTGTGATGGCAAAGAAAGGTGTTCCCCTCTTAAACAAAAGCAACATGAGAGGTGATCAGCTTGTCCGCGTGCAGGTTGAAATCCCAAAGAGATTGAGCACTGATGAGAAGAAGCTCATCGAAGAACTTGCGAGTCTAAGCAAGGGCAAGGCTGCAAGCACGAGATAG

Protein Analysis

447

Amino Acids

47.59

Weight (kDa)

9.19

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 84 - 145 5.8e-28 DnaJ domain
DnaJ_C PF01556 205 - 420 6.2e-44 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 230 - 293 2.3e-14 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 615
AarI CACCTGC 1 cut(s) 1073
Acc36I ACCTGC 2 cut(s) 1073, 1237
Acc65I GGTACC 1 cut(s) 1154
AccB1I GGYRCC 3 cut(s) 136, 722, 1154
AccBSI CCGCTC 1 cut(s) 590
AccII CGCG 1 cut(s) 1242
AciI CCGC 9 cut(s) 531, 558, 590, 690, 828, 898, 976, 981, 1240
AclWI GGATC 1 cut(s) 908
AcoI YGGCCR 1 cut(s) 598
AcsI RAATTY 1 cut(s) 371
AcuI CTGAAG 1 cut(s) 929
AfaI GTAC 4 cut(s) 25, 475, 1061, 1156
AfeI AGCGCT 1 cut(s) 307
AfiI CCNNNNNNNGG 3 cut(s) 520, 1180, 1246
AflIII ACRYGT 1 cut(s) 746
AjnI CCWGG 3 cut(s) 600, 718, 988
AjuI GAANNNNNNNTTGG 2 cut(s) 630, 662
AluBI AGCT 6 cut(s) 150, 319, 687, 1151, 1234, 1288
AluI AGCT 6 cut(s) 150, 319, 687, 1151, 1234, 1288
Alw21I GWGCWC 2 cut(s) 226, 1274
Alw26I GTCTC 1 cut(s) 990
AlwI GGATC 1 cut(s) 908
AlwNI CAGNNNCTG 2 cut(s) 248, 1028
Ama87I CYCGRG 2 cut(s) 159, 356
Aor51HI AGCGCT 1 cut(s) 307
AoxI GGCC 3 cut(s) 68, 190, 598
ApeKI GCWGC 3 cut(s) 687, 741, 1325
ApoI RAATTY 1 cut(s) 371
Asp718I GGTACC 1 cut(s) 1154
AspLEI GCGC 1 cut(s) 308
AspS9I GGNCC 3 cut(s) 69, 88, 191
AsuC2I CCSGG 2 cut(s) 357, 358
AsuHPI GGTGA 3 cut(s) 895, 1004, 1238
AvaI CYCGRG 2 cut(s) 159, 356
AvaII GGWCC 1 cut(s) 88
BaeGI GKGCMC 1 cut(s) 139
BalI TGGCCA 1 cut(s) 600
BanI GGYRCC 3 cut(s) 136, 722, 1154
BauI CACGAG 1 cut(s) 1333
Bbv12I GWGCWC 2 cut(s) 226, 1274
BbvI GCAGC 3 cut(s) 674, 753, 1312
BccI CCATC 8 cut(s) 202, 538, 590, 869, 1118, 1123, 1123, 1174
BceAI ACGGC 1 cut(s) 924
BcgI CGANNNNNNTGC 2 cut(s) 1283, 1317
BciT130I CCWGG 3 cut(s) 602, 720, 990
BciVI GTATCC 1 cut(s) 1084
BclI TGATCA 1 cut(s) 1228
BcnI CCSGG 2 cut(s) 357, 358
BcoDI GTCTC 1 cut(s) 990
BfaI CTAG 1 cut(s) 579
BfoI RGCGCY 1 cut(s) 309
BfuAI ACCTGC 2 cut(s) 1073, 1237
BfuI GTATCC 1 cut(s) 1084
BisI GCNGC 3 cut(s) 688, 742, 1326
BlsI GCNGC 3 cut(s) 689, 743, 1327
Bme1390I CCNGG 5 cut(s) 357, 358, 602, 720, 990
Bme18I GGWCC 1 cut(s) 88
BmeT110I CYCGRG 2 cut(s) 159, 356
BmgT120I GGNCC 3 cut(s) 69, 88, 191
BmiI GGNNCC 6 cut(s) 138, 724, 915, 938, 1113, 1156
BmrFI CCNGG 5 cut(s) 357, 358, 602, 720, 990
BmrI ACTGGG 1 cut(s) 846
BmsI GCATC 3 cut(s) 235, 740, 1075
BmuI ACTGGG 1 cut(s) 846
Bpu10I CCTNAGC 1 cut(s) 65
BpuMI CCSGG 2 cut(s) 357, 358
BsaI GGTCTC 1 cut(s) 990
BsaJI CCNNGG 3 cut(s) 356, 357, 726
Bsc4I CCNNNNNNNGG 3 cut(s) 520, 1180, 1246
Bse118I RCCGGY 1 cut(s) 675
Bse1I ACTGG 1 cut(s) 841
Bse3DI GCAATG 1 cut(s) 706
BseBI CCWGG 3 cut(s) 602, 720, 990
BseDI CCNNGG 3 cut(s) 356, 357, 726
BseGI GGATG 7 cut(s) 95, 334, 549, 610, 731, 880, 1134
BseLI CCNNNNNNNGG 3 cut(s) 520, 1180, 1246
BseMI GCAATG 1 cut(s) 706
BseMII CTCAG 2 cut(s) 68, 1035
BseNI ACTGG 1 cut(s) 841
BseRI GAGGAG 1 cut(s) 901
BseSI GKGCMC 1 cut(s) 139
BseXI GCAGC 3 cut(s) 674, 753, 1312
BsgI GTGCAG 2 cut(s) 207, 1265
Bsh1236I CGCG 1 cut(s) 1242
BshFI GGCC 3 cut(s) 70, 192, 600
BshNI GGYRCC 3 cut(s) 136, 722, 1154
BsiHKAI GWGCWC 2 cut(s) 226, 1274
BsiHKCI CYCGRG 2 cut(s) 159, 356
BsiSI CCGG 2 cut(s) 357, 676
BslFI GGGAC 4 cut(s) 496, 706, 847, 1111
BslI CCNNNNNNNGG 3 cut(s) 520, 1180, 1246
BsmAI GTCTC 1 cut(s) 990
BsmFI GGGAC 4 cut(s) 496, 706, 847, 1111
BsmI GAATGC 2 cut(s) 45, 178
BsnI GGCC 3 cut(s) 70, 192, 600
Bso31I GGTCTC 1 cut(s) 990
BsoBI CYCGRG 2 cut(s) 159, 356
Bsp1286I GDGCHC 3 cut(s) 139, 226, 1274
Bsp1407I TGTACA 1 cut(s) 1059
Bsp143I GATC 4 cut(s) 422, 499, 900, 1228
BspACI CCGC 9 cut(s) 531, 558, 590, 690, 828, 898, 976, 981, 1240
BspANI GGCC 3 cut(s) 70, 192, 600
BspCNI CTCAG 2 cut(s) 67, 1034
BspFNI CGCG 1 cut(s) 1242
BspLI GGNNCC 6 cut(s) 138, 724, 915, 938, 1113, 1156
BspMI ACCTGC 2 cut(s) 1073, 1237
BspPI GGATC 1 cut(s) 908
BspT107I GGYRCC 3 cut(s) 136, 722, 1154
BspTNI GGTCTC 1 cut(s) 990
BsrBI CCGCTC 1 cut(s) 590
BsrDI GCAATG 1 cut(s) 706
BsrFI RCCGGY 1 cut(s) 675
BsrGI TGTACA 1 cut(s) 1059
BsrI ACTGG 1 cut(s) 841
BssAI RCCGGY 1 cut(s) 675
BssECI CCNNGG 3 cut(s) 356, 357, 726
BssMI GATC 4 cut(s) 422, 499, 900, 1228
BssSI CACGAG 1 cut(s) 1333
BssT1I CCWWGG 1 cut(s) 726
Bst2BI CACGAG 1 cut(s) 1333
Bst2UI CCWGG 3 cut(s) 602, 720, 990
BstAUI TGTACA 1 cut(s) 1059
BstC8I GCNNGC 4 cut(s) 190, 321, 1244, 1330
BstDEI CTNAG 4 cut(s) 54, 65, 1021, 1310
BstEII GGTNACC 1 cut(s) 992
BstENI CCTNNNNNAGG 1 cut(s) 518
BstF5I GGATG 7 cut(s) 95, 334, 549, 610, 731, 880, 1134
BstFNI CGCG 1 cut(s) 1242
BstH2I RGCGCY 1 cut(s) 309
BstHHI GCGC 1 cut(s) 308
BstKTI GATC 4 cut(s) 425, 502, 903, 1231
BstMAI GTCTC 1 cut(s) 990
BstMBI GATC 4 cut(s) 422, 499, 900, 1228
BstMWI GCNNNNNNNGC 2 cut(s) 696, 825
BstNI CCWGG 3 cut(s) 602, 720, 990
BstNSI RCATGY 3 cut(s) 741, 750, 819
BstPI GGTNACC 1 cut(s) 992
BstSCI CCNGG 5 cut(s) 355, 356, 600, 718, 988
BstSLI GKGCMC 1 cut(s) 139
BstUI CGCG 1 cut(s) 1242
BstV1I GCAGC 3 cut(s) 674, 753, 1312
BsuI GTATCC 1 cut(s) 1084
BsuRI GGCC 3 cut(s) 70, 192, 600
BtsCI GGATG 7 cut(s) 95, 334, 549, 610, 731, 880, 1134
BtsIMutI CAGTG 1 cut(s) 1272
BveI ACCTGC 2 cut(s) 1073, 1237
Cac8I GCNNGC 4 cut(s) 190, 321, 1244, 1330
CaiI CAGNNNCTG 2 cut(s) 248, 1028
CfoI GCGC 1 cut(s) 308
Cfr10I RCCGGY 1 cut(s) 675
Cfr13I GGNCC 3 cut(s) 69, 88, 191
Cfr9I CCCGGG 1 cut(s) 356
Csp6I GTAC 4 cut(s) 24, 474, 1060, 1155
CviAII CATG 7 cut(s) 27, 526, 738, 747, 816, 825, 1219
CviQI GTAC 4 cut(s) 24, 474, 1060, 1155
DdeI CTNAG 4 cut(s) 54, 65, 1021, 1310
DpnI GATC 4 cut(s) 424, 501, 902, 1230
DpnII GATC 4 cut(s) 422, 499, 900, 1228
EaeI YGGCCR 1 cut(s) 598
EciI GGCGGA 1 cut(s) 573
Eco130I CCWWGG 1 cut(s) 726
Eco31I GGTCTC 1 cut(s) 990
Eco47I GGWCC 1 cut(s) 88
Eco47III AGCGCT 1 cut(s) 307
Eco57I CTGAAG 1 cut(s) 929
Eco88I CYCGRG 2 cut(s) 159, 356
Eco91I GGTNACC 1 cut(s) 992
EcoNI CCTNNNNNAGG 1 cut(s) 518
EcoO109I RGGNCCY 2 cut(s) 69, 88
EcoO65I GGTNACC 1 cut(s) 992
EcoRII CCWGG 3 cut(s) 600, 718, 988
EcoT14I CCWWGG 1 cut(s) 726
EcoT22I ATGCAT 1 cut(s) 394
ErhI CCWWGG 1 cut(s) 726
FaeI CATG 7 cut(s) 30, 529, 741, 750, 819, 828, 1222
FaqI GGGAC 4 cut(s) 496, 706, 847, 1111
FatI CATG 7 cut(s) 26, 525, 737, 746, 815, 824, 1218
FauI CCCGC 3 cut(s) 683, 969, 974
FbaI TGATCA 1 cut(s) 1228
Fnu4HI GCNGC 3 cut(s) 688, 742, 1326
FokI GGATG 7 cut(s) 82, 321, 556, 617, 718, 887, 1141
Fsp4HI GCNGC 3 cut(s) 688, 742, 1326
FspBI CTAG 1 cut(s) 579
GlaI GCGC 1 cut(s) 307
GluI GCNGC 3 cut(s) 688, 742, 1326
HaeII RGCGCY 1 cut(s) 309
HaeIII GGCC 3 cut(s) 70, 192, 600
HapII CCGG 2 cut(s) 357, 676
HhaI GCGC 1 cut(s) 308
Hin1II CATG 7 cut(s) 30, 529, 741, 750, 819, 828, 1222
Hin6I GCGC 1 cut(s) 306
HinP1I GCGC 1 cut(s) 306
HindIII AAGCTT 2 cut(s) 148, 317
HinfI GANTC 8 cut(s) 164, 509, 583, 784, 929, 948, 1144, 1306
HpaII CCGG 2 cut(s) 357, 676
HphI GGTGA 3 cut(s) 895, 1004, 1238
Hpy166II GTNNAC 3 cut(s) 346, 928, 1062
Hpy188I TCNGA 7 cut(s) 57, 295, 315, 409, 909, 953, 1024
Hpy188III TCNNGA 3 cut(s) 161, 276, 338
Hpy8I GTNNAC 3 cut(s) 346, 928, 1062
HpyAV CCTTC 3 cut(s) 904, 953, 966
HpyCH4IV ACGT 1 cut(s) 1039
HpyCH4V TGCA 9 cut(s) 188, 323, 392, 699, 741, 1068, 1088, 1246, 1328
HpyF10VI GCNNNNNNNGC 2 cut(s) 696, 825
HpyF3I CTNAG 4 cut(s) 54, 65, 1021, 1310
HpySE526I ACGT 1 cut(s) 1039
Hsp92II CATG 7 cut(s) 30, 529, 741, 750, 819, 828, 1222
HspAI GCGC 1 cut(s) 306
KpnI GGTACC 1 cut(s) 1158
Ksp22I TGATCA 1 cut(s) 1228
Kzo9I GATC 4 cut(s) 422, 499, 900, 1228
LmnI GCTCC 2 cut(s) 221, 936
Lsp1109I GCAGC 3 cut(s) 674, 753, 1312
LweI GCATC 3 cut(s) 235, 740, 1075
MaeI CTAG 1 cut(s) 579
MaeII ACGT 1 cut(s) 1039
MaeIII GTNAC 3 cut(s) 31, 857, 992
MalI GATC 4 cut(s) 424, 501, 902, 1230
MbiI CCGCTC 1 cut(s) 590
MboI GATC 4 cut(s) 422, 499, 900, 1228
MboII GAAGA 3 cut(s) 1153, 1294, 1307
MhlI GDGCHC 3 cut(s) 139, 226, 1274
MlsI TGGCCA 1 cut(s) 600
MluCI AATT 4 cut(s) 297, 371, 453, 669
MluNI TGGCCA 1 cut(s) 600
MlyI GAGTC 6 cut(s) 518, 592, 778, 923, 957, 1315
MmeI TCCRAC 2 cut(s) 660, 826
Mox20I TGGCCA 1 cut(s) 600
Mph1103I ATGCAT 1 cut(s) 394
MscI TGGCCA 1 cut(s) 600
MseI TTAA 5 cut(s) 300, 456, 944, 1107, 1205
MslI CAYNNNNRTG 3 cut(s) 100, 339, 736
Msp20I TGGCCA 1 cut(s) 600
MspA1I CMGCKG 1 cut(s) 1151
MspI CCGG 2 cut(s) 357, 676
MspR9I CCNGG 5 cut(s) 357, 358, 602, 720, 990
Mva1269I GAATGC 2 cut(s) 45, 178
MvaI CCWGG 3 cut(s) 602, 720, 990
MvnI CGCG 1 cut(s) 1242
MwoI GCNNNNNNNGC 2 cut(s) 696, 825
NciI CCSGG 2 cut(s) 357, 358
NdeII GATC 4 cut(s) 422, 499, 900, 1228
NlaIII CATG 7 cut(s) 30, 529, 741, 750, 819, 828, 1222
NlaIV GGNNCC 6 cut(s) 138, 724, 915, 938, 1113, 1156
NmuCI GTSAC 1 cut(s) 992
NsiI ATGCAT 1 cut(s) 394
NspI RCATGY 3 cut(s) 741, 750, 819
PaqCI CACCTGC 1 cut(s) 1073
PciI ACATGT 1 cut(s) 746
PctI GAATGC 2 cut(s) 45, 178
PfeI GAWTC 2 cut(s) 164, 1144
PflFI GACNNNGTC 1 cut(s) 1028
PkrI GCNGC 3 cut(s) 689, 743, 1327
PleI GAGTC 6 cut(s) 517, 591, 778, 923, 956, 1314
PpsI GAGTC 6 cut(s) 517, 591, 778, 923, 956, 1314
PpuMI RGGWCCY 1 cut(s) 88
PscI ACATGT 1 cut(s) 746
PsiI TTATAA 1 cut(s) 615
Psp5II RGGWCCY 1 cut(s) 88
Psp6I CCWGG 3 cut(s) 600, 718, 988
PspEI GGTNACC 1 cut(s) 992
PspGI CCWGG 3 cut(s) 600, 718, 988
PspN4I GGNNCC 6 cut(s) 138, 724, 915, 938, 1113, 1156
PspPI GGNCC 3 cut(s) 69, 88, 191
PspPPI RGGWCCY 1 cut(s) 88
PstNI CAGNNNCTG 2 cut(s) 248, 1028
PsyI GACNNNGTC 1 cut(s) 1028
PvuII CAGCTG 1 cut(s) 1151
RsaI GTAC 4 cut(s) 25, 475, 1061, 1156
RsaNI GTAC 4 cut(s) 24, 474, 1060, 1155
RseI CAYNNNNRTG 3 cut(s) 100, 339, 736
SaqAI TTAA 5 cut(s) 300, 456, 944, 1107, 1205
SatI GCNGC 3 cut(s) 688, 742, 1326
Sau3AI GATC 4 cut(s) 422, 499, 900, 1228
Sau96I GGNCC 3 cut(s) 69, 88, 191
SchI GAGTC 6 cut(s) 518, 592, 778, 923, 957, 1315
ScrFI CCNGG 5 cut(s) 357, 358, 602, 720, 990
SduI GDGCHC 3 cut(s) 139, 226, 1274
SfaNI GCATC 3 cut(s) 235, 740, 1075
SinI GGWCC 1 cut(s) 88
SmaI CCCGGG 1 cut(s) 358
SmiMI CAYNNNNRTG 3 cut(s) 100, 339, 736
Sse9I AATT 4 cut(s) 297, 371, 453, 669
SsiI CCGC 9 cut(s) 531, 558, 590, 690, 828, 898, 976, 981, 1240
SspI AATATT 2 cut(s) 611, 1092
SspMI CTAG 1 cut(s) 579
StyD4I CCNGG 5 cut(s) 355, 356, 600, 718, 988
StyI CCWWGG 1 cut(s) 726
TaiI ACGT 1 cut(s) 1042
TaqI TCGA 4 cut(s) 507, 586, 1122, 1293
TasI AATT 4 cut(s) 297, 371, 453, 669
TatI WGTACW 2 cut(s) 23, 1059
TfiI GAWTC 2 cut(s) 164, 1144
Tru1I TTAA 5 cut(s) 300, 456, 944, 1107, 1205
Tru9I TTAA 5 cut(s) 300, 456, 944, 1107, 1205
TscAI CASTG 1 cut(s) 1279
TseFI GTSAC 1 cut(s) 992
TseI GCWGC 3 cut(s) 687, 741, 1325
Tsp45I GTSAC 1 cut(s) 992
TspDTI ATGAA 3 cut(s) 429, 621, 972
TspGWI ACGGA 1 cut(s) 777
TspMI CCCGGG 1 cut(s) 356
TspRI CASTG 1 cut(s) 1279
Tth111I GACNNNGTC 1 cut(s) 1028
VpaK11BI GGWCC 1 cut(s) 88
XagI CCTNNNNNAGG 1 cut(s) 518
XapI RAATTY 1 cut(s) 371
XceI RCATGY 3 cut(s) 741, 750, 819
XmaI CCCGGG 1 cut(s) 356
XspI CTAG 1 cut(s) 579
Zsp2I ATGCAT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.