RLG00000019588

Chaperone protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
53956862 .. 53963972
7111 bp
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UTR
Exon/CDS
Intron
RLM00000019588

Sequence Viewer

Length: 1365 bp
ATGCAATTAAGGTCGACTGCGACGGCAATTGATCCAGCACACCACCGATCGAAGATTGAGGGTAGAGGGACGACGGAGAAAGATAAAGAAGCAGAAGTAATCAGACTTGGAGGTCGCAGAGGACTGCCAGTAGTGCAGTATAGGAGCCACGAAATCTCATCCATACCAAGAGCGCTTCCCTCACTTGGAGCCCTCCTTCACTTCCGCGCCATCCACAGCTGCCCCTTCACCACTCCTCAGCTCATCTCACCTACCACCGACCTCTCTCTCTCTCCTCACTGGTTCTTGAGCATCAGGTTTCCCCTATTGGCATCGAATATCAGCTTATTGCTCACAGAAAAGTTCACTAAATGGCAATTATACCTTGTGGAATGTTGTGTTTCCAGCCAAATAGGCTCTTTGGGGGCACCAACTTCAAGCATCTTCTCCCGGGATTCCTTGAATGCTCTATTCTGTGCAGGCTCTCATACTTCAAATCGCAGTAGGGGAGCAAGATTCATAGTTAGAGCAGACTCTGACTATTATTCTGTTCTTGGAGTGTCAAGAAATGCGACTAAAGCAGAAATCAAAAGCGCTTACCGGAAGCTTGCAAGAAGTTATCATCCAGATGTGAACAAAGAAGCAGGGGCAGACACAAAATTCAAGGAAATTAGTAATGCATACGAGGTCTTGTCTGATGATGAAAAACGATCACTATATGACAAATATGGAGAGGCTGGAGTTAAAGGTGCTGGTATGGGTCCAGGGGATTTCAGCAATCCATTTGACCTGTTTGAGTCACTGTTTGAGGGCATGGGAGGTATGGGGTCCAGAGGTGGTGGTGGTTCTAGGAATAGAGCGGTTGATGGCCAGGACGAGTATTATAGTCTTGTGTTGAATTTCAAAGAAGCAGTTTTTGGGGTTGAAAAAGAGATTGAAATAAGTCGATTGGAGACCTGTGGAACTTGCAACGGTTCAGGCAGCCGTTTAAGAGTTCGAAATGAAGGCAATGCTGGAAAGCGAGGCGGGTCGCCAGGTGACCTATTTGTTATTATAGAAGTTATCCCAGACCCTGTCCTCAAACGTGATGATACCAACATTATGTACTCCTGCAAGGTCTCCTATATTGATGCAATTTTGGGGACTACAATTAAGGTTCCAACAGTTGATGGCATGGTTGATTTGAAGATTCCAGCAGGGACTCAACCAAACACGACCCTTGTGATGGCAAAGAAAGGTGTTCCCCTCTTAAACAAAAGCAACATGAGAGGTGATCAGCTGGTGCGAGTGCAGGTTGAAATCCCAAAGAGATTAAGCAGTGATGAAAAGAAGCTCATCGAGGAACTTGCGAATCTGAGCAAGGGAAAGGCTGCAAGCAGGAGATAG

Protein Analysis

455

Amino Acids

49.59

Weight (kDa)

9.19

Isoelectric Point (pI)

43.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 173 - 234 4.3e-27 DnaJ domain
DnaJ_C PF01556 288 - 428 3.4e-35 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 111
Acc36I ACCTGC 1 cut(s) 1261
AccB1I GGYRCC 1 cut(s) 406
AccBSI CCGCTC 1 cut(s) 839
AccI GTMKAC 1 cut(s) 14
AccII CGCG 1 cut(s) 207
AciI CCGC 3 cut(s) 205, 839, 1005
AclWI GGATC 1 cut(s) 26
AcoI YGGCCR 1 cut(s) 847
AcsI RAATTY 2 cut(s) 638, 877
AfaI GTAC 1 cut(s) 1085
AfeI AGCGCT 2 cut(s) 174, 574
AfiI CCNNNNNNNGG 2 cut(s) 185, 1204
AjnI CCWGG 3 cut(s) 742, 849, 1012
AjuI GAANNNNNNNTTGG 2 cut(s) 879, 911
AluBI AGCT 6 cut(s) 219, 241, 324, 586, 1258, 1312
AluI AGCT 6 cut(s) 219, 241, 324, 586, 1258, 1312
Alw26I GTCTC 2 cut(s) 926, 1102
AlwI GGATC 1 cut(s) 26
AlwNI CAGNNNCTG 2 cut(s) 515, 1052
Ama87I CYCGRG 1 cut(s) 429
Aor51HI AGCGCT 2 cut(s) 174, 574
AoxI GGCC 1 cut(s) 847
ApeKI GCWGC 3 cut(s) 219, 960, 1349
ApoI RAATTY 2 cut(s) 638, 877
AspLEI GCGC 3 cut(s) 175, 209, 575
AspS9I GGNCC 2 cut(s) 740, 807
AsuC2I CCSGG 2 cut(s) 430, 431
AsuHPI GGTGA 4 cut(s) 220, 240, 1028, 1262
AsuII TTCGAA 1 cut(s) 976
AvaI CYCGRG 1 cut(s) 429
AvaII GGWCC 2 cut(s) 740, 807
BaeGI GKGCMC 1 cut(s) 409
BalI TGGCCA 1 cut(s) 849
BanI GGYRCC 1 cut(s) 406
BanII GRGCYC 1 cut(s) 193
BbvCI CCTCAGC 1 cut(s) 237
BbvI GCAGC 3 cut(s) 206, 972, 1336
BccI CCATC 4 cut(s) 218, 839, 1142, 1198
BceAI ACGGC 2 cut(s) 39, 948
BcgI CGANNNNNNTGC 2 cut(s) 1307, 1341
BciT130I CCWGG 3 cut(s) 744, 851, 1014
BclI TGATCA 1 cut(s) 1252
BcnI CCSGG 2 cut(s) 430, 431
BcoDI GTCTC 2 cut(s) 926, 1102
BfaI CTAG 1 cut(s) 828
BfoI RGCGCY 2 cut(s) 176, 576
BfuAI ACCTGC 1 cut(s) 1261
BglI GCCNNNNNGGC 1 cut(s) 393
BisI GCNGC 3 cut(s) 220, 961, 1350
BlsI GCNGC 3 cut(s) 221, 962, 1351
Bme1390I CCNGG 5 cut(s) 430, 431, 744, 851, 1014
Bme18I GGWCC 2 cut(s) 740, 807
BmeT110I CYCGRG 1 cut(s) 429
BmgT120I GGNCC 2 cut(s) 740, 807
BmiI GGNNCC 6 cut(s) 146, 190, 408, 741, 808, 1137
BmrFI CCNGG 5 cut(s) 430, 431, 744, 851, 1014
BmsI GCATC 4 cut(s) 300, 320, 429, 1099
BpmI CTGGAG 1 cut(s) 738
Bpu10I CCTNAGC 1 cut(s) 237
Bpu14I TTCGAA 1 cut(s) 976
BpuEI CTTGAG 1 cut(s) 307
BpuMI CCSGG 2 cut(s) 430, 431
BsaI GGTCTC 2 cut(s) 926, 1102
BsaJI CCNNGG 2 cut(s) 429, 743
BsaWI WCCGGW 1 cut(s) 579
Bsc4I CCNNNNNNNGG 2 cut(s) 185, 1204
Bse1I ACTGG 2 cut(s) 128, 284
Bse3DI GCAATG 1 cut(s) 994
BseBI CCWGG 3 cut(s) 744, 851, 1014
BseDI CCNNGG 2 cut(s) 429, 743
BseGI GGATG 3 cut(s) 158, 210, 601
BseLI CCNNNNNNNGG 2 cut(s) 185, 1204
BseMI GCAATG 1 cut(s) 994
BseMII CTCAG 2 cut(s) 251, 1325
BseNI ACTGG 2 cut(s) 128, 284
BseRI GAGGAG 2 cut(s) 225, 264
BseSI GKGCMC 1 cut(s) 409
BseXI GCAGC 3 cut(s) 206, 972, 1336
BsgI GTGCAG 3 cut(s) 155, 477, 1289
Bsh1236I CGCG 1 cut(s) 207
Bsh1285I CGRYCG 1 cut(s) 50
BshFI GGCC 1 cut(s) 849
BshNI GGYRCC 1 cut(s) 406
BsiEI CGRYCG 1 cut(s) 50
BsiHKCI CYCGRG 1 cut(s) 429
BsiSI CCGG 2 cut(s) 430, 580
BslFI GGGAC 3 cut(s) 82, 1135, 1192
BslI CCNNNNNNNGG 2 cut(s) 185, 1204
BsmAI GTCTC 2 cut(s) 926, 1102
BsmFI GGGAC 3 cut(s) 82, 1135, 1192
BsmI GAATGC 1 cut(s) 448
BsnI GGCC 1 cut(s) 849
Bso31I GGTCTC 2 cut(s) 926, 1102
BsoBI CYCGRG 1 cut(s) 429
Bsp119I TTCGAA 1 cut(s) 976
Bsp1286I GDGCHC 2 cut(s) 193, 409
Bsp143I GATC 4 cut(s) 31, 47, 689, 1252
BspACI CCGC 3 cut(s) 205, 839, 1005
BspANI GGCC 1 cut(s) 849
BspCNI CTCAG 2 cut(s) 250, 1326
BspFNI CGCG 1 cut(s) 207
BspLI GGNNCC 6 cut(s) 146, 190, 408, 741, 808, 1137
BspMI ACCTGC 1 cut(s) 1261
BspPI GGATC 1 cut(s) 26
BspT104I TTCGAA 1 cut(s) 976
BspT107I GGYRCC 1 cut(s) 406
BspTNI GGTCTC 2 cut(s) 926, 1102
BsrBI CCGCTC 1 cut(s) 839
BsrDI GCAATG 1 cut(s) 994
BsrI ACTGG 2 cut(s) 128, 284
BssECI CCNNGG 2 cut(s) 429, 743
BssMI GATC 4 cut(s) 31, 47, 689, 1252
Bst2UI CCWGG 3 cut(s) 744, 851, 1014
Bst4CI ACNGT 3 cut(s) 783, 953, 1144
BstBI TTCGAA 1 cut(s) 976
BstC8I GCNNGC 3 cut(s) 460, 588, 1354
BstDEI CTNAG 2 cut(s) 237, 1334
BstEII GGTNACC 1 cut(s) 1016
BstF5I GGATG 3 cut(s) 158, 210, 601
BstFNI CGCG 1 cut(s) 207
BstH2I RGCGCY 2 cut(s) 176, 576
BstHHI GCGC 3 cut(s) 175, 209, 575
BstKTI GATC 4 cut(s) 34, 50, 692, 1255
BstMAI GTCTC 2 cut(s) 926, 1102
BstMBI GATC 4 cut(s) 31, 47, 689, 1252
BstMCI CGRYCG 1 cut(s) 50
BstMWI GCNNNNNNNGC 3 cut(s) 133, 393, 557
BstNI CCWGG 3 cut(s) 744, 851, 1014
BstPI GGTNACC 1 cut(s) 1016
BstSCI CCNGG 5 cut(s) 428, 429, 742, 849, 1012
BstSLI GKGCMC 1 cut(s) 409
BstUI CGCG 1 cut(s) 207
BstV1I GCAGC 3 cut(s) 206, 972, 1336
BsuRI GGCC 1 cut(s) 849
BtsCI GGATG 3 cut(s) 158, 210, 601
BtsI GCAGTG 1 cut(s) 1303
BtsIMutI CAGTG 3 cut(s) 277, 779, 1303
BveI ACCTGC 1 cut(s) 1261
Cac8I GCNNGC 3 cut(s) 460, 588, 1354
CaiI CAGNNNCTG 2 cut(s) 515, 1052
CfoI GCGC 3 cut(s) 175, 209, 575
Cfr13I GGNCC 2 cut(s) 740, 807
Cfr9I CCCGGG 1 cut(s) 429
Csp6I GTAC 1 cut(s) 1084
CviAII CATG 3 cut(s) 793, 1153, 1243
CviQI GTAC 1 cut(s) 1084
DdeI CTNAG 2 cut(s) 237, 1334
DpnI GATC 4 cut(s) 33, 49, 691, 1254
DpnII GATC 4 cut(s) 31, 47, 689, 1252
DrdI GACNNNNNNGTC 1 cut(s) 111
DseDI GACNNNNNNGTC 1 cut(s) 111
EaeI YGGCCR 1 cut(s) 847
Eco24I GRGCYC 1 cut(s) 193
Eco31I GGTCTC 2 cut(s) 926, 1102
Eco47I GGWCC 2 cut(s) 740, 807
Eco47III AGCGCT 2 cut(s) 174, 574
Eco88I CYCGRG 1 cut(s) 429
Eco91I GGTNACC 1 cut(s) 1016
EcoO65I GGTNACC 1 cut(s) 1016
EcoRII CCWGG 3 cut(s) 742, 849, 1012
EcoT22I ATGCAT 1 cut(s) 661
EcoT38I GRGCYC 1 cut(s) 193
FaeI CATG 3 cut(s) 796, 1156, 1246
FaqI GGGAC 3 cut(s) 82, 1135, 1192
FatI CATG 3 cut(s) 792, 1152, 1242
FauI CCCGC 1 cut(s) 998
FbaI TGATCA 1 cut(s) 1252
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 3 cut(s) 220, 961, 1350
FokI GGATG 3 cut(s) 145, 197, 588
FriOI GRGCYC 1 cut(s) 193
Fsp4HI GCNGC 3 cut(s) 220, 961, 1350
FspBI CTAG 1 cut(s) 828
GlaI GCGC 3 cut(s) 174, 208, 574
GluI GCNGC 3 cut(s) 220, 961, 1350
GsuI CTGGAG 1 cut(s) 738
HaeII RGCGCY 2 cut(s) 176, 576
HaeIII GGCC 1 cut(s) 849
HapII CCGG 2 cut(s) 430, 580
HhaI GCGC 3 cut(s) 175, 209, 575
Hin1II CATG 3 cut(s) 796, 1156, 1246
Hin6I GCGC 3 cut(s) 173, 207, 573
HinP1I GCGC 3 cut(s) 173, 207, 573
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HindIII AAGCTT 1 cut(s) 584
HinfI GANTC 7 cut(s) 434, 495, 512, 776, 1168, 1180, 1330
HpaII CCGG 2 cut(s) 430, 580
HphI GGTGA 4 cut(s) 220, 240, 1028, 1262
Hpy166II GTNNAC 3 cut(s) 15, 345, 613
Hpy188I TCNGA 4 cut(s) 104, 517, 676, 1335
Hpy188III TCNNGA 4 cut(s) 286, 543, 605, 810
Hpy8I GTNNAC 3 cut(s) 15, 345, 613
Hpy99I CGWCG 2 cut(s) 25, 76
HpyAV CCTTC 3 cut(s) 206, 235, 977
HpyCH4III ACNGT 3 cut(s) 783, 953, 1144
HpyCH4IV ACGT 1 cut(s) 1063
HpyF10VI GCNNNNNNNGC 3 cut(s) 133, 393, 557
HpyF3I CTNAG 2 cut(s) 237, 1334
HpySE526I ACGT 1 cut(s) 1063
Hsp92II CATG 3 cut(s) 796, 1156, 1246
HspAI GCGC 3 cut(s) 173, 207, 573
Ksp22I TGATCA 1 cut(s) 1252
Kzo9I GATC 4 cut(s) 31, 47, 689, 1252
LmnI GCTCC 3 cut(s) 144, 188, 488
Lsp1109I GCAGC 3 cut(s) 206, 972, 1336
LweI GCATC 4 cut(s) 300, 320, 429, 1099
MaeI CTAG 1 cut(s) 828
MaeII ACGT 1 cut(s) 1063
MaeIII GTNAC 2 cut(s) 777, 1016
MalI GATC 4 cut(s) 33, 49, 691, 1254
MbiI CCGCTC 1 cut(s) 839
MboI GATC 4 cut(s) 31, 47, 689, 1252
MboII GAAGA 3 cut(s) 64, 415, 1177
MfeI CAATTG 1 cut(s) 27
MhlI GDGCHC 2 cut(s) 193, 409
MlsI TGGCCA 1 cut(s) 849
MluCI AATT 8 cut(s) 5, 27, 356, 638, 648, 877, 1113, 1128
MluNI TGGCCA 1 cut(s) 849
MlyI GAGTC 3 cut(s) 506, 785, 1174
MmeI TCCRAC 1 cut(s) 1163
Mox20I TGGCCA 1 cut(s) 849
Mph1103I ATGCAT 1 cut(s) 661
MscI TGGCCA 1 cut(s) 849
MseI TTAA 6 cut(s) 8, 723, 968, 1131, 1229, 1292
MslI CAYNNNNRTG 1 cut(s) 606
Msp20I TGGCCA 1 cut(s) 849
MspA1I CMGCKG 2 cut(s) 219, 1258
MspI CCGG 2 cut(s) 430, 580
MspR9I CCNGG 5 cut(s) 430, 431, 744, 851, 1014
MunI CAATTG 1 cut(s) 27
Mva1269I GAATGC 1 cut(s) 448
MvaI CCWGG 3 cut(s) 744, 851, 1014
MvnI CGCG 1 cut(s) 207
MwoI GCNNNNNNNGC 3 cut(s) 133, 393, 557
NciI CCSGG 2 cut(s) 430, 431
NdeII GATC 4 cut(s) 31, 47, 689, 1252
NlaIII CATG 3 cut(s) 796, 1156, 1246
NlaIV GGNNCC 6 cut(s) 146, 190, 408, 741, 808, 1137
NmuCI GTSAC 2 cut(s) 777, 1016
NsiI ATGCAT 1 cut(s) 661
NspV TTCGAA 1 cut(s) 976
PctI GAATGC 1 cut(s) 448
PfeI GAWTC 4 cut(s) 434, 495, 1168, 1330
PflFI GACNNNGTC 1 cut(s) 1052
PkrI GCNGC 3 cut(s) 221, 962, 1351
Ple19I CGATCG 1 cut(s) 50
PleI GAGTC 3 cut(s) 506, 784, 1174
PpsI GAGTC 3 cut(s) 506, 784, 1174
Psp6I CCWGG 3 cut(s) 742, 849, 1012
PspEI GGTNACC 1 cut(s) 1016
PspGI CCWGG 3 cut(s) 742, 849, 1012
PspN4I GGNNCC 6 cut(s) 146, 190, 408, 741, 808, 1137
PspPI GGNCC 2 cut(s) 740, 807
PstNI CAGNNNCTG 2 cut(s) 515, 1052
PsyI GACNNNGTC 1 cut(s) 1052
PvuI CGATCG 1 cut(s) 50
PvuII CAGCTG 2 cut(s) 219, 1258
RsaI GTAC 1 cut(s) 1085
RsaNI GTAC 1 cut(s) 1084
RseI CAYNNNNRTG 1 cut(s) 606
SalI GTCGAC 1 cut(s) 13
SaqAI TTAA 6 cut(s) 8, 723, 968, 1131, 1229, 1292
SatI GCNGC 3 cut(s) 220, 961, 1350
Sau3AI GATC 4 cut(s) 31, 47, 689, 1252
Sau96I GGNCC 2 cut(s) 740, 807
SchI GAGTC 3 cut(s) 506, 785, 1174
ScrFI CCNGG 5 cut(s) 430, 431, 744, 851, 1014
SduI GDGCHC 2 cut(s) 193, 409
SfaNI GCATC 4 cut(s) 300, 320, 429, 1099
SfuI TTCGAA 1 cut(s) 976
SinI GGWCC 2 cut(s) 740, 807
SmaI CCCGGG 1 cut(s) 431
SmiMI CAYNNNNRTG 1 cut(s) 606
SmlI CTYRAG 1 cut(s) 286
SmoI CTYRAG 1 cut(s) 286
Sse9I AATT 8 cut(s) 5, 27, 356, 638, 648, 877, 1113, 1128
SsiI CCGC 3 cut(s) 205, 839, 1005
SspMI CTAG 1 cut(s) 828
StyD4I CCNGG 5 cut(s) 428, 429, 742, 849, 1012
TaaI ACNGT 3 cut(s) 783, 953, 1144
TaiI ACGT 1 cut(s) 1066
TaqI TCGA 6 cut(s) 14, 50, 314, 925, 976, 1317
TasI AATT 8 cut(s) 5, 27, 356, 638, 648, 877, 1113, 1128
TatI WGTACW 1 cut(s) 1083
TfiI GAWTC 4 cut(s) 434, 495, 1168, 1330
Tru1I TTAA 6 cut(s) 8, 723, 968, 1131, 1229, 1292
Tru9I TTAA 6 cut(s) 8, 723, 968, 1131, 1229, 1292
TscAI CASTG 3 cut(s) 284, 786, 1303
TseFI GTSAC 2 cut(s) 777, 1016
TseI GCWGC 3 cut(s) 219, 960, 1349
Tsp45I GTSAC 2 cut(s) 777, 1016
TspDTI ATGAA 4 cut(s) 487, 696, 996, 1317
TspGWI ACGGA 1 cut(s) 89
TspMI CCCGGG 1 cut(s) 429
TspRI CASTG 3 cut(s) 284, 786, 1303
Tth111I GACNNNGTC 1 cut(s) 1052
VpaK11BI GGWCC 2 cut(s) 740, 807
XapI RAATTY 2 cut(s) 638, 877
XmaI CCCGGG 1 cut(s) 429
XmiI GTMKAC 1 cut(s) 14
XspI CTAG 1 cut(s) 828
Zsp2I ATGCAT 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.