Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009795

Physical Location & Seq

Genomic Coordinates Forward (+)

10894253 .. 10898672

Gene Structure 4420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G25600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2667 bp

ATGGAGAAGAAGAAGGTATGGTTTTGGGGTGTGAAAGACGACGGCGAAGGAGGCGGAGGCAGAGGAGGAGGAAGAACCAAAGATGCGGAGGATGATGTTGCTGACCATTTATCTCGCGACGGGACGATGAGTCAGTATAGCCTTAGCAAAGGCCTTCTTCCTTCTCTTGGAGCCAACAATCGTTCCTCTCGTGACGTCATTCTCCCTCGCTTCATCGTCTCTCCTTTTGATCCTCGTTACAGAGCGTGGGAGACGTTTTTGGTGTTTTTGGTGCTCTACACAGCTTGGGCATCACCTTTTGAATTTGGGTTTCTGCAAAAGCCAAGACCACCTCTCAGTATTCTCGATAACATTGTCAACGGGTTTTTCGCTGTTGATATAGTCTTGACATTCTTTGTTGCCTTCTTGGACAAGGTAACTTATCTTCTTGTCGATGATCCAAAGAGAATAGCTTGGAGATATGCGTCGACTTGGCTGATTTTCGACGTGGTTTCCACATTTCCTTACGAAATTTTTGGGAGCTTGCTTCATGAGAGTATTCAGGGATATGGTATTTTCAGTATGCTACGTTTATGGCGTCTTCGTAGGGTCAGTAATTGTTTTGCCAGGTTAGAGAAAGACAGGAAATACAGTTACTTTTGGGTTCGCTGCTCGAAGCTTCTCCTTGTTACTCTTTTTGTGATTCATTGTGGTGCTTGTTTCCTCTATTCCATTGCTGCACATTATCCAGATCCATCCAAGACGTTTATGGCATTAACCGATGAAAATTGGAAAGAGTCTCCTATTGCAGTGCGGTATAACACGGCAATGTATTGGTCCATAACTACTTTCTCCACAACTGGTTATGGTGATATACATGGTGTTAACTCAAGAGAGATGACTTTCATTCTTTTCTACATGGTTTTTAATCTTGGACTGTCAGCATATATAATTGGTAATATGACCAACTTGGTGGTTCATGTGACCGGCCGCACCAGAAAATTTAGAGATACCATCCAAGCCGCATCAGGGTTTGGTCAGAGGAACAATCTGCCAGTGCGGTTACAAGATCAGATGGTTGCTCATTTGTGTTTGAGGTACAGAACTGATTCAGAAGGCTTACAGCAGCAAGAAATAATCGATTCTCTTCCCAAAGCTATTCGGTCCAGCATATCACATTATCTGTTCTATGAAGTTGTTGACAAAATTTACTTGTTCCATGGAATATCCAATGATCTTCTTTTCCAGTTGGTCACGGAAATGAAAGCAGAGTATTTTCCTCCCAAAGAAGATGTGATTTTGCAAAATGAAGCCCCAACAGATTTCTACATATTGGTGACCGGAGCTGTTGACATAATTGCACGTGTAAATGGAGTGGAGCAGGTAGTTAGTGAAGCACAGAGAGGACATGTTTTTGGTGAAGTTGGGGTACTATGTTACAGACCGCAGCTGTTTACTGTTCGTACCAAGCGATTGAGTCAGTTGCTTCGTCTGAACCGTACAGTACTCTTAAATCTTGTTCAGGCAAATGTAGGAGATGGAGCAATAATCATGAATAATCTTCTTCAGCATTTAAAAGACTCAGAAGATCCAGTGATGAAAGGCGTTTTGGCTGATACAGAACACATGTTGGCTCAAGGGAAAATGGATTTACCTCTCAGCTTGTGCTTTGCTGCAGCCAGAGGAGATGATTTATTGCTGCATCAGTTACTAAGACGAGGCTCAAGCCCTAATGAAATGGATAAGGACGGGCGAACTGCGCTGCATATAGCAGCATCAAAGGGAAGCCATTATTGCGTCGTTTTACTTCTCGAACATGGAGCAGATCCTAACATTAGAGATTCCGAAGGCAATGTACCCTTGTGGGAAGCAATCATAGGAAGACATAGAGAAATTGCTAAACTCCTTGCAGAGAATGGAGCAAAGCTAAGCTTAGACTCAGTGAGCTATTTCTCTGGCTTAGCCGTGGAGAAAAACTGCTTAGACGCACTCAAAGACATCATCAAATATGGCGGCGACGTCACACTCCCTGATGGAAACGGAACCACAGCTTTACACAGAGCAGTGTCAGAAGGACACTTGGAGATTGTGAAGTTCTTACTAGACCAAGGTGCTGACTTGGACTGGCCGGATTCTTACGGATGGACTCCTCGTGGTCTTGCCGATCATCAAGGGAATGAAGAAATCAAAACCTTGTTTCATAATCACAGGCCTGTGGAGAAAAAACCGAAACCTATCCCTGGAATACCTCAGAGTCCTGTGACAGGGAAGCCATTAATGAAGTATAGCAGTGAGCCTACAATGCATTCAGGAGAACTCGTCTTAGACGGGGGTCAGGTTGTTGTTTCTCAGAAACGGAAACTCAATAACTTCAGAAACTCGCTCTTCGGAATCATTTCAGCTGCAAATAGCGCTGATGATGGAGGAGAAGTTCCAAGAAGTCCAGCGGTTCCTGGAGGAGGAGGTAGTATGATTTATCCGGAGAGAGTGACGATAAGTTCGCCGGAAAACGGTGAAACTGGTGGAAAAGTTGTTTTGTTACCAAATTCTATGGAAGAGCTATTGAAAATTGGTGAAAATAAGATGGGATTCGTCCCAACTAAAGTACTTACGAGAGAAGGAGCTGAAATTGACGACATCACTCTTATCAGAGATGGCGATTTTCTCCTTCTATCAAGGGATCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005216 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008324 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010035 GO:0010053 GO:0010054 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016049 GO:0021700 GO:0022622 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0034220 GO:0040007 GO:0042221 GO:0042391 GO:0042802 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060560 GO:0065007 GO:0065008 GO:0071695 GO:0071804 GO:0071805 GO:0071944 GO:0080147 GO:0090333 GO:0090558 GO:0090627 GO:0098655 GO:0098660 GO:0098662 GO:0099094 GO:0099402 GO:1901700 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 Ion_trans KHA cNMP_binding

Protein Analysis

888

Amino Acids

99.21

Weight (kDa)

6.31

Isoelectric Point (pI)

37.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	80 - 325	1.2e-39	Ion transport protein
Ion_trans_2	PF07885	263 - 318	5.1e-09	Ion channel
cNMP_binding	PF00027	418 - 503	1e-13	Cyclic nucleotide-binding domain
Ank_2	PF12796	548 - 637	1e-17	Ankyrin repeats (3 copies)
Ank_4	PF13637	548 - 589	8.1e-06	Ankyrin repeats (many copies)
Ank_5	PF13857	563 - 614	8.2e-08	Ankyrin repeats (many copies)
Ank	PF00023	576 - 607	1.3e-09	Ankyrin repeat
Ank_4	PF13637	584 - 629	5.3e-06	Ankyrin repeats (many copies)
Ank_2	PF12796	647 - 726	3.7e-12	Ankyrin repeats (3 copies)
Ank_4	PF13637	648 - 694	8.5e-10	Ankyrin repeats (many copies)
Ank_5	PF13857	663 - 711	1.1e-08	Ankyrin repeats (many copies)
Ank	PF00023	673 - 704	2.4e-08	Ankyrin repeat
KHA	PF11834	822 - 884	4.6e-23	KHA, dimerisation domain of potassium ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0009795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25600 AT4G32500
fragaria_vesca	FvH4_2g29700 FvH4_2g29700 FvH4_2g29700
malus_domestica	MD08G1142800.v1.1 MD15G1119300.v1.1
prunus_persica	Prupe.1G472600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0298701
rosa_laevigata	RLG00000011492
rosa_multiflora	Rmu_co8298943.1_g000001 Rmu_sc0008099.1_g000002 Rmu_sc0008142.1_g000002 Rmu_sc0032030.1_g000001
rosa_roxburghii	Rroxscaffold_7G00169400
rosa_rugosa	Rorug06G0282700
rosa_samantha	Rh6AG393800 Rh6BG401600 Rh6CG407500 Rh6DG394100
rosa_wichuraiana	Rw6G034430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	198, 2001
Acc36I	ACCTGC	1 cut(s)	1351
AccI	GTMKAC	1 cut(s)	467
AccII	CGCG	1 cut(s)	117
AccIII	TCCGGA	1 cut(s)	2458
AciI	CCGC	9 cut(s)	54, 86, 793, 970, 1002, 1039, 1424, 1992, 2426
AclWI	GGATC	6 cut(s)	224, 431, 725, 1562, 1799, 2654
AcoI	YGGCCR	2 cut(s)	967, 2105
AcsI	RAATTY	5 cut(s)	302, 510, 980, 1185, 2524
AcuI	CTGAAG	2 cut(s)	1529, 2335
AcvI	CACGTG	1 cut(s)	1343
AcyI	GRCGYC	3 cut(s)	195, 577, 1998
AfaI	GTAC	7 cut(s)	1079, 1410, 1444, 1480, 1485, 1836, 2586
AfeI	AGCGCT	1 cut(s)	2392
AfiI	CCNNNNNNNGG	6 cut(s)	167, 1008, 2219, 2243, 2438, 2489
AflIII	ACRYGT	3 cut(s)	1342, 1387, 1605
AgsI	TTSAA	2 cut(s)	302, 2545
AhdI	GACNNNNNGTC	1 cut(s)	129
AjiI	CACGTC	1 cut(s)	487
AjnI	CCWGG	3 cut(s)	605, 2218, 2431
AjuI	GAANNNNNNNTTGG	2 cut(s)	1571, 1603
AloI	GAACNNNNNNTCC	2 cut(s)	2394, 2426
Alw21I	GWGCWC	1 cut(s)	276
Alw26I	GTCTC	3 cut(s)	223, 245, 783
AlwI	GGATC	6 cut(s)	224, 431, 725, 1562, 1799, 2654
Aor13HI	TCCGGA	1 cut(s)	2458
Aor51HI	AGCGCT	1 cut(s)	2392
AoxI	GGCC	4 cut(s)	151, 967, 2105, 2189
ApoI	RAATTY	5 cut(s)	302, 510, 980, 1185, 2524
ArsI	GACNNNNNNTTYG	2 cut(s)	2461, 2493
AseI	ATTAAT	1 cut(s)	2255
Asp700I	GAANNNNTTC	2 cut(s)	1087, 2374
AspLEI	GCGC	2 cut(s)	1741, 2393
AspS9I	GGNCC	2 cut(s)	816, 1143
AsuHPI	GGTGA	6 cut(s)	285, 860, 1327, 1409, 2504, 2564
AvaII	GGWCC	2 cut(s)	816, 1143
BamHI	GGATCC	1 cut(s)	2659
BarI	GAAGNNNNNNTAC	6 cut(s)	408, 440, 1392, 1424, 1818, 1850
BauI	CACGAG	2 cut(s)	189, 2130
BbrPI	CACGTG	1 cut(s)	1343
BbsI	GAAGAC	2 cut(s)	572, 1867
Bbv12I	GWGCWC	1 cut(s)	276
BccI	CCATC	9 cut(s)	742, 1001, 1048, 1511, 2006, 2115, 2393, 2557, 2627
BceAI	ACGGC	3 cut(s)	58, 819, 1928
BciT130I	CCWGG	3 cut(s)	607, 2220, 2433
BcoDI	GTCTC	3 cut(s)	223, 245, 783
BfaI	CTAG	1 cut(s)	2081
BfmI	CTRYAG	1 cut(s)	1653
BfoI	RGCGCY	1 cut(s)	2394
BfuAI	ACCTGC	1 cut(s)	1351
BlpI	GCTNAGC	2 cut(s)	1907, 1939
BmcAI	AGTACT	2 cut(s)	1485, 2586
Bme1390I	CCNGG	3 cut(s)	607, 2220, 2433
Bme18I	GGWCC	2 cut(s)	816, 1143
BmeRI	GACNNNNNGTC	1 cut(s)	129
BmgBI	CACGTC	1 cut(s)	487
BmgT120I	GGNCC	2 cut(s)	816, 1143
BmiI	GGNNCC	4 cut(s)	172, 2023, 2430, 2661
BmrFI	CCNGG	3 cut(s)	607, 2220, 2433
BmsI	GCATC	5 cut(s)	73, 299, 1013, 1690, 1763
BoxI	GACNNNNGTC	1 cut(s)	2310
BpiI	GAAGAC	2 cut(s)	572, 1867
BpmI	CTGGAG	1 cut(s)	2454
Bpu10I	CCTNAGC	1 cut(s)	143
Bpu1102I	GCTNAGC	2 cut(s)	1907, 1939
BpuEI	CTTGAG	3 cut(s)	853, 1599, 1687
Bsa29I	ATCGAT	1 cut(s)	1119
BsaAI	YACGTR	1 cut(s)	1343
BsaHI	GRCGYC	3 cut(s)	195, 577, 1998
BsaJI	CCNNGG	4 cut(s)	1198, 1944, 2086, 2218
BsaWI	WCCGGW	2 cut(s)	1319, 2458
BsaXI	ACNNNNNCTCC	4 cut(s)	2283, 2313, 2394, 2424
Bsc4I	CCNNNNNNNGG	6 cut(s)	167, 1008, 2219, 2243, 2438, 2489
Bse118I	RCCGGY	1 cut(s)	965
Bse1I	ACTGG	6 cut(s)	844, 1034, 1225, 1571, 2108, 2503
Bse3DI	GCAATG	3 cut(s)	711, 813, 1837
BseAI	TCCGGA	1 cut(s)	2458
BseBI	CCWGG	3 cut(s)	607, 2220, 2433
BseCI	ATCGAT	1 cut(s)	1119
BseDI	CCNNGG	4 cut(s)	1198, 1944, 2086, 2218
BseGI	GGATG	4 cut(s)	97, 734, 993, 2126
BseLI	CCNNNNNNNGG	6 cut(s)	167, 1008, 2219, 2243, 2438, 2489
BseMI	GCAATG	3 cut(s)	711, 813, 1837
BseMII	CTCAG	6 cut(s)	349, 1575, 1651, 1932, 2243, 2342
BseNI	ACTGG	6 cut(s)	844, 1034, 1225, 1571, 2108, 2503
BseRI	GAGGAG	7 cut(s)	78, 81, 1677, 2118, 2418, 2451, 2454
BseX3I	CGGCCG	1 cut(s)	967
BsgI	GTGCAG	1 cut(s)	702
Bsh1236I	CGCG	1 cut(s)	117
Bsh1285I	CGRYCG	1 cut(s)	970
BshFI	GGCC	4 cut(s)	153, 969, 2107, 2191
BshVI	ATCGAT	1 cut(s)	1119
BsiEI	CGRYCG	1 cut(s)	970
BsiHKAI	GWGCWC	1 cut(s)	276
BsiSI	CCGG	5 cut(s)	966, 1320, 2108, 2459, 2483
BslFI	GGGAC	2 cut(s)	136, 2558
BslI	CCNNNNNNNGG	6 cut(s)	167, 1008, 2219, 2243, 2438, 2489
BsmAI	GTCTC	3 cut(s)	223, 245, 783
BsmBI	CGTCTC	2 cut(s)	223, 245
BsmFI	GGGAC	2 cut(s)	136, 2558
BsmI	GAATGC	1 cut(s)	2284
BsnI	GGCC	4 cut(s)	153, 969, 2107, 2191
Bsp1286I	GDGCHC	1 cut(s)	276
Bsp13I	TCCGGA	1 cut(s)	2458
Bsp143I	GATC	9 cut(s)	229, 436, 730, 1048, 1213, 1567, 1804, 2143, 2659
Bsp1720I	GCTNAGC	2 cut(s)	1907, 1939
Bsp19I	CCATGG	1 cut(s)	1198
Bsp68I	TCGCGA	1 cut(s)	117
BspACI	CCGC	9 cut(s)	54, 86, 793, 970, 1002, 1039, 1424, 1992, 2426
BspANI	GGCC	4 cut(s)	153, 969, 2107, 2191
BspCNI	CTCAG	6 cut(s)	348, 1574, 1650, 1931, 2242, 2341
BspDI	ATCGAT	1 cut(s)	1119
BspEI	TCCGGA	1 cut(s)	2458
BspFNI	CGCG	1 cut(s)	117
BspHI	TCATGA	2 cut(s)	529, 1530
BspLI	GGNNCC	4 cut(s)	172, 2023, 2430, 2661
BspMAI	CTGCAG	1 cut(s)	1657
BspMI	ACCTGC	1 cut(s)	1351
BspPI	GGATC	6 cut(s)	224, 431, 725, 1562, 1799, 2654
BspQI	GCTCTTC	2 cut(s)	2369, 2529
BsrDI	GCAATG	3 cut(s)	711, 813, 1837
BsrFI	RCCGGY	1 cut(s)	965
BsrI	ACTGG	6 cut(s)	844, 1034, 1225, 1571, 2108, 2503
BssAI	RCCGGY	1 cut(s)	965
BssECI	CCNNGG	4 cut(s)	1198, 1944, 2086, 2218
BssMI	GATC	9 cut(s)	229, 436, 730, 1048, 1213, 1567, 1804, 2143, 2659
BssNI	GRCGYC	3 cut(s)	195, 577, 1998
BssSI	CACGAG	2 cut(s)	189, 2130
BssT1I	CCWWGG	2 cut(s)	1198, 2086
Bst2BI	CACGAG	2 cut(s)	189, 2130
Bst2UI	CCWGG	3 cut(s)	607, 2220, 2433
Bst4CI	ACNGT	6 cut(s)	632, 918, 1438, 1478, 1483, 2492
Bst6I	CTCTTC	3 cut(s)	1131, 2369, 2529
BstACI	GRCGYC	3 cut(s)	195, 577, 1998
BstBAI	YACGTR	1 cut(s)	1343
BstC8I	GCNNGC	1 cut(s)	524
BstDSI	CCRYGG	2 cut(s)	1198, 1944
BstEII	GGTNACC	1 cut(s)	1315
BstENI	CCTNNNNNAGG	2 cut(s)	2241, 2436
BstF5I	GGATG	4 cut(s)	97, 734, 993, 2126
BstFNI	CGCG	1 cut(s)	117
BstH2I	RGCGCY	1 cut(s)	2394
BstHHI	GCGC	2 cut(s)	1741, 2393
BstKTI	GATC	9 cut(s)	232, 439, 733, 1051, 1216, 1570, 1807, 2146, 2662
BstMAI	GTCTC	3 cut(s)	223, 245, 783
BstMBI	GATC	9 cut(s)	229, 436, 730, 1048, 1213, 1567, 1804, 2143, 2659
BstMCI	CGRYCG	1 cut(s)	970
BstMWI	GCNNNNNNNGC	5 cut(s)	51, 1738, 1773, 2281, 2390
BstNI	CCWGG	3 cut(s)	607, 2220, 2433
BstNSI	RCATGY	2 cut(s)	1391, 1609
BstPAI	GACNNNNGTC	1 cut(s)	2310
BstPI	GGTNACC	1 cut(s)	1315
BstSCI	CCNGG	3 cut(s)	605, 2218, 2431
BstSFI	CTRYAG	1 cut(s)	1653
BstUI	CGCG	1 cut(s)	117
BstV2I	GAAGAC	2 cut(s)	572, 1867
BstX2I	RGATCY	4 cut(s)	730, 1567, 1804, 2659
BstXI	CCANNNNNNTGG	1 cut(s)	952
BstYI	RGATCY	4 cut(s)	730, 1567, 1804, 2659
BstZI	CGGCCG	1 cut(s)	967
Bsu15I	ATCGAT	1 cut(s)	1119
BsuRI	GGCC	4 cut(s)	153, 969, 2107, 2191
BsuTUI	ATCGAT	1 cut(s)	1119
BtgI	CCRYGG	2 cut(s)	1198, 1944
BtrI	CACGTC	1 cut(s)	487
BtsCI	GGATG	4 cut(s)	97, 734, 993, 2126
BtsI	GCAGTG	3 cut(s)	795, 2049, 2275
BtsIMutI	CAGTG	6 cut(s)	795, 1041, 1578, 1926, 2049, 2275
BtuMI	TCGCGA	1 cut(s)	117
BveI	ACCTGC	1 cut(s)	1351
Cac8I	GCNNGC	1 cut(s)	524
CciI	TCATGA	2 cut(s)	529, 1530
CfoI	GCGC	2 cut(s)	1741, 2393
Cfr10I	RCCGGY	1 cut(s)	965
Cfr13I	GGNCC	2 cut(s)	816, 1143
ClaI	ATCGAT	1 cut(s)	1119
CseI	GACGC	4 cut(s)	453, 566, 1765, 1973
Csp6I	GTAC	7 cut(s)	1078, 1409, 1443, 1479, 1484, 1835, 2585
CviAII	CATG	9 cut(s)	530, 857, 898, 959, 1199, 1388, 1531, 1606, 1796
CviQI	GTAC	7 cut(s)	1078, 1409, 1443, 1479, 1484, 1835, 2585
DpnI	GATC	9 cut(s)	231, 438, 732, 1050, 1215, 1569, 1806, 2145, 2661
DpnII	GATC	9 cut(s)	229, 436, 730, 1048, 1213, 1567, 1804, 2143, 2659
DraI	TTTAAA	1 cut(s)	1554
DriI	GACNNNNNGTC	1 cut(s)	129
EaeI	YGGCCR	2 cut(s)	967, 2105
EagI	CGGCCG	1 cut(s)	967
Eam1104I	CTCTTC	3 cut(s)	1131, 2369, 2529
Eam1105I	GACNNNNNGTC	1 cut(s)	129
EarI	CTCTTC	3 cut(s)	1131, 2369, 2529
EciI	GGCGGA	1 cut(s)	69
EclXI	CGGCCG	1 cut(s)	967
Eco130I	CCWWGG	2 cut(s)	1198, 2086
Eco147I	AGGCCT	2 cut(s)	153, 2191
Eco47I	GGWCC	2 cut(s)	816, 1143
Eco47III	AGCGCT	1 cut(s)	2392
Eco52I	CGGCCG	1 cut(s)	967
Eco57I	CTGAAG	2 cut(s)	1529, 2335
Eco72I	CACGTG	1 cut(s)	1343
Eco91I	GGTNACC	1 cut(s)	1315
EcoNI	CCTNNNNNAGG	2 cut(s)	2241, 2436
EcoO65I	GGTNACC	1 cut(s)	1315
EcoRII	CCWGG	3 cut(s)	605, 2218, 2431
EcoT14I	CCWWGG	2 cut(s)	1198, 2086
EcoT22I	ATGCAT	1 cut(s)	2286
ErhI	CCWWGG	2 cut(s)	1198, 2086
Esp3I	CGTCTC	2 cut(s)	223, 245
FaeI	CATG	9 cut(s)	533, 860, 901, 962, 1202, 1391, 1534, 1609, 1799
FalI	AAGNNNNNCTT	5 cut(s)	141, 173, 1895, 1927, 2647
FaqI	GGGAC	2 cut(s)	136, 2558
FatI	CATG	9 cut(s)	529, 856, 897, 958, 1198, 1387, 1530, 1605, 1795
FblI	GTMKAC	1 cut(s)	467
FokI	GGATG	4 cut(s)	104, 721, 980, 2133
FspBI	CTAG	1 cut(s)	2081
GlaI	GCGC	2 cut(s)	1740, 2392
GsuI	CTGGAG	1 cut(s)	2454
HaeII	RGCGCY	1 cut(s)	2394
HaeIII	GGCC	4 cut(s)	153, 969, 2107, 2191
HapII	CCGG	5 cut(s)	966, 1320, 2108, 2459, 2483
HgaI	GACGC	4 cut(s)	453, 566, 1765, 1973
HhaI	GCGC	2 cut(s)	1741, 2393
Hin1I	GRCGYC	3 cut(s)	195, 577, 1998
Hin1II	CATG	9 cut(s)	533, 860, 901, 962, 1202, 1391, 1534, 1609, 1799
Hin6I	GCGC	2 cut(s)	1739, 2391
HinP1I	GCGC	2 cut(s)	1739, 2391
HincII	GTYRAC	5 cut(s)	358, 468, 865, 1180, 1330
HindII	GTYRAC	5 cut(s)	358, 468, 865, 1180, 1330
HindIII	AAGCTT	2 cut(s)	656, 1909
HpaI	GTTAAC	1 cut(s)	865
HpaII	CCGG	5 cut(s)	966, 1320, 2108, 2459, 2483
HphI	GGTGA	6 cut(s)	285, 860, 1327, 1409, 2504, 2564
Hpy166II	GTNNAC	6 cut(s)	358, 468, 865, 1180, 1330, 1434
Hpy8I	GTNNAC	6 cut(s)	358, 468, 865, 1180, 1330, 1434
Hpy99I	CGWCG	6 cut(s)	44, 122, 469, 488, 1781, 2000
HpyCH4III	ACNGT	6 cut(s)	632, 918, 1438, 1478, 1483, 2492
HpyCH4IV	ACGT	7 cut(s)	195, 254, 486, 568, 743, 1342, 1998
HpyF10VI	GCNNNNNNNGC	5 cut(s)	51, 1738, 1773, 2281, 2390
HpySE526I	ACGT	7 cut(s)	195, 254, 486, 568, 743, 1342, 1998
Hsp92I	GRCGYC	3 cut(s)	195, 577, 1998
Hsp92II	CATG	9 cut(s)	533, 860, 901, 962, 1202, 1391, 1534, 1609, 1799
HspAI	GCGC	2 cut(s)	1739, 2391
Kpn2I	TCCGGA	1 cut(s)	2458
KspAI	GTTAAC	1 cut(s)	865
Kzo9I	GATC	9 cut(s)	229, 436, 730, 1048, 1213, 1567, 1804, 2143, 2659
LguI	GCTCTTC	2 cut(s)	2369, 2529
LmnI	GCTCC	8 cut(s)	170, 519, 1322, 1357, 1520, 1799, 1898, 2600
LweI	GCATC	5 cut(s)	73, 299, 1013, 1690, 1763
MaeI	CTAG	1 cut(s)	2081
MaeII	ACGT	7 cut(s)	195, 254, 486, 568, 743, 1342, 1998
MalI	GATC	9 cut(s)	231, 438, 732, 1050, 1215, 1569, 1806, 2145, 2661
MboI	GATC	9 cut(s)	229, 436, 730, 1048, 1213, 1567, 1804, 2143, 2659
MflI	RGATCY	4 cut(s)	730, 1567, 1804, 2659
MhlI	GDGCHC	1 cut(s)	276
MlyI	GAGTC	7 cut(s)	139, 785, 1465, 1553, 1910, 2119, 2242
Mph1103I	ATGCAT	1 cut(s)	2286
MroI	TCCGGA	1 cut(s)	2458
MroXI	GAANNNNTTC	2 cut(s)	1087, 2374
MseI	TTAA	6 cut(s)	755, 864, 906, 1490, 1553, 2255
MslI	CAYNNNNRTG	4 cut(s)	690, 806, 1238, 1313
MspA1I	CMGCKG	3 cut(s)	1429, 2381, 2426
MspI	CCGG	5 cut(s)	966, 1320, 2108, 2459, 2483
MspR9I	CCNGG	3 cut(s)	607, 2220, 2433
Mva1269I	GAATGC	1 cut(s)	2284
MvaI	CCWGG	3 cut(s)	607, 2220, 2433
MvnI	CGCG	1 cut(s)	117
MwoI	GCNNNNNNNGC	5 cut(s)	51, 1738, 1773, 2281, 2390
NcoI	CCATGG	1 cut(s)	1198
NdeII	GATC	9 cut(s)	229, 436, 730, 1048, 1213, 1567, 1804, 2143, 2659
NlaIII	CATG	9 cut(s)	533, 860, 901, 962, 1202, 1391, 1534, 1609, 1799
NlaIV	GGNNCC	4 cut(s)	172, 2023, 2430, 2661
NmuCI	GTSAC	7 cut(s)	191, 961, 1231, 1315, 1999, 2239, 2467
NruI	TCGCGA	1 cut(s)	117
NsiI	ATGCAT	1 cut(s)	2286
NspI	RCATGY	2 cut(s)	1391, 1609
PagI	TCATGA	2 cut(s)	529, 1530
PceI	AGGCCT	2 cut(s)	153, 2191
PciI	ACATGT	2 cut(s)	1387, 1605
PciSI	GCTCTTC	2 cut(s)	2369, 2529
PcsI	WCGNNNNNNNCGW	4 cut(s)	187, 574, 1447, 1474
PctI	GAATGC	1 cut(s)	2284
PdmI	GAANNNNTTC	2 cut(s)	1087, 2374
PfeI	GAWTC	7 cut(s)	682, 1088, 1121, 1820, 2111, 2370, 2568
PfoI	TCCNGGA	1 cut(s)	2431
PleI	GAGTC	7 cut(s)	138, 784, 1464, 1553, 1910, 2119, 2241
PmaCI	CACGTG	1 cut(s)	1343
PmlI	CACGTG	1 cut(s)	1343
PpsI	GAGTC	7 cut(s)	138, 784, 1464, 1553, 1910, 2119, 2241
Ppu21I	YACGTR	1 cut(s)	1343
PscI	ACATGT	2 cut(s)	1387, 1605
PshAI	GACNNNNGTC	1 cut(s)	2310
PshBI	ATTAAT	1 cut(s)	2255
Psp6I	CCWGG	3 cut(s)	605, 2218, 2431
PspCI	CACGTG	1 cut(s)	1343
PspEI	GGTNACC	1 cut(s)	1315
PspGI	CCWGG	3 cut(s)	605, 2218, 2431
PspN4I	GGNNCC	4 cut(s)	172, 2023, 2430, 2661
PspPI	GGNCC	2 cut(s)	816, 1143
PstI	CTGCAG	1 cut(s)	1657
PsuI	RGATCY	4 cut(s)	730, 1567, 1804, 2659
PvuII	CAGCTG	2 cut(s)	1429, 2381
RruI	TCGCGA	1 cut(s)	117
RsaI	GTAC	7 cut(s)	1079, 1410, 1444, 1480, 1485, 1836, 2586
RsaNI	GTAC	7 cut(s)	1078, 1409, 1443, 1479, 1484, 1835, 2585
RseI	CAYNNNNRTG	4 cut(s)	690, 806, 1238, 1313
SalI	GTCGAC	1 cut(s)	466
SapI	GCTCTTC	2 cut(s)	2369, 2529
SaqAI	TTAA	6 cut(s)	755, 864, 906, 1490, 1553, 2255
Sau3AI	GATC	9 cut(s)	229, 436, 730, 1048, 1213, 1567, 1804, 2143, 2659
Sau96I	GGNCC	2 cut(s)	816, 1143
ScaI	AGTACT	2 cut(s)	1485, 2586
SchI	GAGTC	7 cut(s)	139, 785, 1465, 1553, 1910, 2119, 2242
ScrFI	CCNGG	3 cut(s)	607, 2220, 2433
SduI	GDGCHC	1 cut(s)	276
SfaNI	GCATC	5 cut(s)	73, 299, 1013, 1690, 1763
SfcI	CTRYAG	1 cut(s)	1653
SinI	GGWCC	2 cut(s)	816, 1143
SmiMI	CAYNNNNRTG	4 cut(s)	690, 806, 1238, 1313
SmlI	CTYRAG	3 cut(s)	868, 1614, 1702
SmoI	CTYRAG	3 cut(s)	868, 1614, 1702
SseBI	AGGCCT	2 cut(s)	153, 2191
SsiI	CCGC	9 cut(s)	54, 86, 793, 970, 1002, 1039, 1424, 1992, 2426
SspMI	CTAG	1 cut(s)	2081
StuI	AGGCCT	2 cut(s)	153, 2191
StyD4I	CCNGG	3 cut(s)	605, 2218, 2431
StyI	CCWWGG	2 cut(s)	1198, 2086
TaaI	ACNGT	6 cut(s)	632, 918, 1438, 1478, 1483, 2492
TaiI	ACGT	7 cut(s)	198, 257, 489, 571, 746, 1345, 2001
TaqI	TCGA	7 cut(s)	345, 432, 467, 483, 653, 1119, 1791
TaqII	GACCGA	1 cut(s)	1131
TatI	WGTACW	2 cut(s)	1483, 2584
TauI	GCSGC	3 cut(s)	972, 1004, 1995
TfiI	GAWTC	7 cut(s)	682, 1088, 1121, 1820, 2111, 2370, 2568
Tru1I	TTAA	6 cut(s)	755, 864, 906, 1490, 1553, 2255
Tru9I	TTAA	6 cut(s)	755, 864, 906, 1490, 1553, 2255
TscAI	CASTG	6 cut(s)	795, 1041, 1578, 1926, 2049, 2275
TseFI	GTSAC	7 cut(s)	191, 961, 1231, 1315, 1999, 2239, 2467
Tsp45I	GTSAC	7 cut(s)	191, 961, 1231, 1315, 1999, 2239, 2467
TspGWI	ACGGA	4 cut(s)	1250, 2034, 2133, 2350
TspRI	CASTG	6 cut(s)	795, 1041, 1578, 1926, 2049, 2275
VpaK11BI	GGWCC	2 cut(s)	816, 1143
VspI	ATTAAT	1 cut(s)	2255
XagI	CCTNNNNNAGG	2 cut(s)	2241, 2436
XapI	RAATTY	5 cut(s)	302, 510, 980, 1185, 2524
XceI	RCATGY	2 cut(s)	1391, 1609
XcmI	CCANNNNNNNNNTGG	1 cut(s)	745
XmiI	GTMKAC	1 cut(s)	467
XmnI	GAANNNNTTC	2 cut(s)	1087, 2374
XspI	CTAG	1 cut(s)	2081
ZraI	GACGTC	2 cut(s)	196, 1999
ZrmI	AGTACT	2 cut(s)	1485, 2586
Zsp2I	ATGCAT	1 cut(s)	2286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.