AT4G32500

Potassium channel

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
15681017 .. 15685339
4323 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G32500.1

Sequence Viewer

Length: 2643 bp
ATGGGTATTGAGAAGAGGAAGAAGATGGTGTGGTTTTGGCCGGAGAAGCACGAGGGTGGAGTGATTAAGGAGGCGGAGGATGTGGCGGCGGAACATATATCGAGAGAAGGTACAATGAGTCATTACAGTTTTAGCAAAGGTCTTCTTCCGCCGCTTGGAGTCGGAGCCACCGCTCGCTCTAGCCGTCACATTAAGCTCCGCTGCTTCATCGTCTCTCCTTTCGATCCTCGCTACAGAGCTTGGGATTGGTTTCTAGTGATTTTGGTGCTATACACAGCGTGGGCATCTCCTTTTGAGTTCGGGTTCCTACAAACACCAAGAGCACCTCTCAGTATTCTTGATAACGTGGTGAATGGATTTTTCGCTGTCGACATTGTTCTGACATTCTTTGTTGCCTTCTTGGACAAGGCAACTTATCTCCTAGTCGATGATCCCAAGAGAATAGCTTGGAGATATACTTCGACTTGGCTGATTTTTGATGTGGTATCTACAGTTCCTTATGAACTTTTTGGCAGCTTATTGCATAACACTATTCAAGGATATGGAATTTTCAGTATGTTGCGTTTATGGCGTCTGCACAGGGTCAGTAAATGTTTTGCCAGATTGGAGAAAGATCGAAAATACAACTACTTCTGGATTCGATGCACGAAGCTTCTCCTCGTTTCTCTCTTTGTGGTTCATTGTGGCGCCTGCTTCTGCTATTCTATTGCTGCACATTATCCAGACCCTTCAATGACATTTATGGCACTTGCGGAGGCAAACTGGAAACAGAAATCTTTGCTTATCCGGTATGTTACAGCAATGTATTGGTCCATAACAACCTTCTCCACAACGGGTTATGGTGATATACATGGTAATAATGCAGAAGAGAGGGCCTTCATTCTCTTCTACATGATCTTTAATCTTGGATTGCTAGCTTATATAATTGGTAACATGACAAACTTGGTGGTTCACGTGACCAGTCGCACCAGAAACTTTAGAGATACCATTCAAGCTGCCTCAGCGTTTGCTCAGAGGAACAATCTTCCACTGGGCTTGCAAGAACAGATGGTAGCTCATTTGTCTTTGAGGTACAGAACCGATTCAGAAGGCCTGCAGCAGCAAGAAATTATTGATTCCCTCCCCAAGGCTATTCGTTCCAGCATATCGCATTATCTGTTCTACGAAGTTGTTGACAAAACCTACTTATTCCATGGAATATCCAATGATCTTCTTTTCCAGTTGGTCTCTGAGATGAAGGCAGAGTATTTTCCTCCTAAAGAAGATGTGATTTTGCGGAATGAAGCACCGTCAGACTTTTACATAATGGTCACAGGAGCTGTTGACATCATTGCGCGTGTGAATGGAGTGGATCAGGTAGTTGGTGAAGCACAGACCGGCCATGTTTTTGGTGAAGTTGGGGTTCTATGTTACAGGCCACAGTTGTTCACAGTTCGAACCAAACGATTGAGTCAATTGCTTCGTCTGAACCGTACAGCATTCTTAAATCTTGTTCAGGCAAACGTTGGTGATGGGGCAATAATCATGAATAATCTTCTTCAGCATCTGAAAGACTCAACAGATCCAGTGATGAAAGGCATTTTGGCTGAGACAGAACTCATGTTGGCTCAGGGGAAAATGGATTTACCTCTCAGCTTATGTTTTGCAGCAGCCAGAGGAGACGATTTACTGCTGCATCAGTTGCTGAAACGAGGCTCAAACCCTAACGAAACCGATAAGAACGGTCGAACCGCGTTGCATATAGCAGCATCAAAAGGAAGCCAATATTGTGTTGTATTACTTCTCGAGCATGGAGCAGATCCTAACATTAGAGATTCAGAAGGTAGTGTACCATTATGGGAAGCAATCATTGGGAGACATGAAGAAAATGCTAAACTCTTATCAGAAAATGGCGCAACGCTAAGCTTCGACACAGTAGGCTATTTCTCGTGCTTAGCCGTTGGACAAAACAACTTAAATGCGCTCAAAGACATTGTAAAATACGGAGGAGATATCTCACTCTCAGATGTCAACGGAACCACAGCTCTGCACAGAGCAGTCTCAGAAGGAAACTTGGAGATTGTACAATTCTTGTTAGAGAAAGGAGCTGATATGGACAAGCCAGATGTTTATGGTTGGACGGCTCGTGCTCTTGCTGAGCATCAAGGACATGAGGATATCAAGGCTTTGTTTTATAATCAGAGACCAGTGGAGAGGAAAACGATACTTGTTTCTGGCACACCAGAGATTAAACCATTGATGAAACATTCCAGTGAGCCTGTAATGACTCACCATCATTCAAGGGAAGCAATGCCGCCTCTGGCCAGAGCCGTTTCTCAGAGACGGAAGCTCAGTAATTTCAAGAACTCGCTGTTTGGTATCATGTCAGCTGCTAAAACTGGTGATGAAGGAGGAGCATCTACCAGGACTGGAATAAGTGAAGGAGTTGGTGGGGTTTATCCGGCGAGAGTGACAATCAGTGGTGAGGCTTCCTCCTCCGGTAAAGTAGTAAAGTTACCGGATTCTCTTGAAGAATTAATTGAAATTGGTGAGAAGAAGCTGGGATTCGTAGCCACAAAGATTCTGAGCAGAGAAGGAGCTGAAATCGACGACATCAGGATTATAAGAGATGGCGATTTTCTCCTTCTTCTTAAGGTTTCTTGA

Protein Analysis

880

Amino Acids

98.5

Weight (kDa)

7.37

Isoelectric Point (pI)

33.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 78 - 323 7.8e-43 Ion transport protein
Ion_trans_2 PF07885 260 - 316 1.1e-11 Ion channel
cNMP_binding PF00027 416 - 501 8.1e-13 Cyclic nucleotide-binding domain
Ank_2 PF12796 546 - 633 4.1e-16 Ankyrin repeats (3 copies)
Ank_4 PF13637 546 - 586 1.8e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 561 - 612 5.2e-09 Ankyrin repeats (many copies)
Ank PF00023 574 - 605 1.8e-09 Ankyrin repeat
Ank_2 PF12796 645 - 724 1.7e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 646 - 692 1.3e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 660 - 712 1.1e-06 Ankyrin repeats (many copies)
Ank PF00023 671 - 702 6.3e-08 Ankyrin repeat
KHA PF11834 816 - 876 1.1e-20 KHA, dimerisation domain of potassium ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2175, 2603
AccB1I GGYRCC 1 cut(s) 686
AccBSI CCGCTC 1 cut(s) 173
AccI GTMKAC 1 cut(s) 369
AccII CGCG 2 cut(s) 1336, 1733
AclI AACGTT 1 cut(s) 1503
AclWI GGATC 5 cut(s) 218, 425, 1359, 1556, 1793
AcoI YGGCCR 3 cut(s) 38, 1378, 2301
AcsI RAATTY 1 cut(s) 546
AcuI CTGAAG 1 cut(s) 1523
AcvI CACGTG 1 cut(s) 955
AcyI GRCGYC 2 cut(s) 571, 687
AdeI CACNNNGTG 1 cut(s) 279
AfaI GTAC 5 cut(s) 112, 1073, 1474, 1830, 2064
AfiI CCNNNNNNNGG 2 cut(s) 155, 1126
AflII CTTAAG 1 cut(s) 2630
AgsI TTSAA 7 cut(s) 536, 732, 992, 2280, 2341, 2510, 2522
AjnI CCWGG 1 cut(s) 2402
AjuI GAANNNNNNNTTGG 4 cut(s) 1565, 1597, 1833, 1865
AleI CACNNNNGTG 1 cut(s) 54
Alw21I GWGCWC 2 cut(s) 325, 2131
Alw26I GTCTC 8 cut(s) 217, 1231, 1583, 1653, 1849, 2044, 2176, 2314
AlwI GGATC 5 cut(s) 218, 425, 1359, 1556, 1793
AlwNI CAGNNNCTG 3 cut(s) 1319, 1546, 1684
Ama87I CYCGRG 1 cut(s) 1784
AoxI GGCC 6 cut(s) 38, 873, 1090, 1378, 1415, 2301
ApoI RAATTY 1 cut(s) 546
AseI ATTAAT 1 cut(s) 2516
Asp700I GAANNNNTTC 1 cut(s) 1081
AspLEI GCGC 4 cut(s) 689, 1336, 1895, 1963
AspS9I GGNCC 2 cut(s) 810, 873
AsuHPI GGTGA 9 cut(s) 361, 854, 1376, 1403, 1520, 2261, 2393, 2474, 2540
AsuII TTCGAA 1 cut(s) 1435
AsuNHI GCTAGC 1 cut(s) 913
AvaI CYCGRG 1 cut(s) 1784
AvaII GGWCC 1 cut(s) 810
BalI TGGCCA 1 cut(s) 2303
BanI GGYRCC 1 cut(s) 686
BarI GAAGNNNNNNTAC 2 cut(s) 1812, 1844
BauI CACGAG 3 cut(s) 50, 1927, 2124
BbrPI CACGTG 1 cut(s) 955
BbsI GAAGAC 1 cut(s) 134
Bbv12I GWGCWC 2 cut(s) 325, 2131
BbvCI CCTCAGC 1 cut(s) 1000
BccI CCATC 5 cut(s) 19, 1042, 1505, 2280, 2603
BceAI ACGGC 4 cut(s) 168, 1922, 2136, 2294
BciT130I CCWGG 1 cut(s) 2404
BcoDI GTCTC 8 cut(s) 217, 1231, 1583, 1653, 1849, 2044, 2176, 2314
BfaI CTAG 4 cut(s) 180, 254, 422, 914
BfmI CTRYAG 3 cut(s) 232, 489, 1094
BfoI RGCGCY 1 cut(s) 690
BfrI CTTAAG 1 cut(s) 2630
BlpI GCTNAGC 3 cut(s) 1901, 1933, 2136
Bme1390I CCNGG 1 cut(s) 2404
Bme18I GGWCC 1 cut(s) 810
BmeT110I CYCGRG 1 cut(s) 1784
BmgT120I GGNCC 2 cut(s) 810, 873
BmiI GGNNCC 4 cut(s) 166, 305, 688, 2017
BmrFI CCNGG 1 cut(s) 2404
BmrI ACTGGG 1 cut(s) 1040
BmsI GCATC 7 cut(s) 293, 632, 1552, 1684, 1757, 2149, 2405
BmtI GCTAGC 1 cut(s) 917
BmuI ACTGGG 1 cut(s) 1040
BpiI GAAGAC 1 cut(s) 134
BplI GAGNNNNNCTC 4 cut(s) 312, 344, 2456, 2488
Bpu10I CCTNAGC 2 cut(s) 1000, 1608
Bpu1102I GCTNAGC 3 cut(s) 1901, 1933, 2136
Bpu14I TTCGAA 1 cut(s) 1435
BsaAI YACGTR 1 cut(s) 955
BsaHI GRCGYC 2 cut(s) 571, 687
BsaI GGTCTC 2 cut(s) 1231, 2176
BsaJI CCNNGG 2 cut(s) 1125, 1192
BsaWI WCCGGW 3 cut(s) 786, 2477, 2497
Bsc4I CCNNNNNNNGG 2 cut(s) 155, 1126
Bse118I RCCGGY 1 cut(s) 1376
Bse1I ACTGG 9 cut(s) 767, 960, 1035, 1219, 1565, 2186, 2250, 2383, 2413
Bse3DI GCAATG 3 cut(s) 807, 1329, 2295
BseBI CCWGG 1 cut(s) 2404
BseDI CCNNGG 2 cut(s) 1125, 1192
BseGI GGATG 1 cut(s) 85
BseLI CCNNNNNNNGG 2 cut(s) 155, 1126
BseMI GCAATG 3 cut(s) 807, 1329, 2295
BseNI ACTGG 9 cut(s) 767, 960, 1035, 1219, 1565, 2186, 2250, 2383, 2413
BseRI GAGGAG 5 cut(s) 647, 1671, 2001, 2406, 2464
BseYI CCCAGC 1 cut(s) 2539
BsgI GTGCAG 3 cut(s) 560, 696, 2012
Bsh1236I CGCG 2 cut(s) 1336, 1733
Bsh1285I CGRYCG 1 cut(s) 1726
BshFI GGCC 6 cut(s) 40, 875, 1092, 1380, 1417, 2303
BshNI GGYRCC 1 cut(s) 686
BsiEI CGRYCG 1 cut(s) 1726
BsiHKAI GWGCWC 2 cut(s) 325, 2131
BsiHKCI CYCGRG 1 cut(s) 1784
BsiSI CCGG 6 cut(s) 41, 787, 1377, 2441, 2478, 2498
BslI CCNNNNNNNGG 2 cut(s) 155, 1126
BsmAI GTCTC 8 cut(s) 217, 1231, 1583, 1653, 1849, 2044, 2176, 2314
BsmBI CGTCTC 3 cut(s) 217, 1653, 2314
BsmI GAATGC 1 cut(s) 1478
BsnI GGCC 6 cut(s) 40, 875, 1092, 1380, 1417, 2303
Bso31I GGTCTC 2 cut(s) 1231, 2176
BsoBI CYCGRG 1 cut(s) 1784
Bsp119I TTCGAA 1 cut(s) 1435
Bsp1286I GDGCHC 2 cut(s) 325, 2131
Bsp1407I TGTACA 1 cut(s) 2062
Bsp143I GATC 8 cut(s) 223, 430, 613, 894, 1207, 1351, 1561, 1798
Bsp1720I GCTNAGC 3 cut(s) 1901, 1933, 2136
Bsp19I CCATGG 1 cut(s) 1192
BspANI GGCC 6 cut(s) 40, 875, 1092, 1380, 1417, 2303
BspFNI CGCG 2 cut(s) 1336, 1733
BspHI TCATGA 1 cut(s) 1524
BspLI GGNNCC 4 cut(s) 166, 305, 688, 2017
BspMAI CTGCAG 1 cut(s) 1098
BspOI GCTAGC 1 cut(s) 917
BspPI GGATC 5 cut(s) 218, 425, 1359, 1556, 1793
BspT104I TTCGAA 1 cut(s) 1435
BspT107I GGYRCC 1 cut(s) 686
BspTI CTTAAG 1 cut(s) 2630
BspTNI GGTCTC 2 cut(s) 1231, 2176
BsrBI CCGCTC 1 cut(s) 173
BsrDI GCAATG 3 cut(s) 807, 1329, 2295
BsrFI RCCGGY 1 cut(s) 1376
BsrGI TGTACA 1 cut(s) 2062
BsrI ACTGG 9 cut(s) 767, 960, 1035, 1219, 1565, 2186, 2250, 2383, 2413
BssAI RCCGGY 1 cut(s) 1376
BssECI CCNNGG 2 cut(s) 1125, 1192
BssMI GATC 8 cut(s) 223, 430, 613, 894, 1207, 1351, 1561, 1798
BssNI GRCGYC 2 cut(s) 571, 687
BssSI CACGAG 3 cut(s) 50, 1927, 2124
BssT1I CCWWGG 2 cut(s) 1125, 1192
Bst2BI CACGAG 3 cut(s) 50, 1927, 2124
Bst2UI CCWGG 1 cut(s) 2404
Bst4CI ACNGT 8 cut(s) 128, 493, 1290, 1422, 1432, 1472, 1724, 1915
Bst6I CTCTTC 3 cut(s) 8, 861, 890
BstACI GRCGYC 2 cut(s) 571, 687
BstAFI CTTAAG 1 cut(s) 2630
BstAPI GCANNNNNTGC 1 cut(s) 1681
BstAUI TGTACA 1 cut(s) 2062
BstBAI YACGTR 1 cut(s) 955
BstBI TTCGAA 1 cut(s) 1435
BstC8I GCNNGC 5 cut(s) 175, 691, 915, 1037, 1094
BstDSI CCRYGG 1 cut(s) 1192
BstENI CCTNNNNNAGG 1 cut(s) 1124
BstF5I GGATG 1 cut(s) 85
BstFNI CGCG 2 cut(s) 1336, 1733
BstH2I RGCGCY 1 cut(s) 690
BstHHI GCGC 4 cut(s) 689, 1336, 1895, 1963
BstKTI GATC 8 cut(s) 226, 433, 616, 897, 1210, 1354, 1564, 1801
BstMAI GTCTC 8 cut(s) 217, 1231, 1583, 1653, 1849, 2044, 2176, 2314
BstMBI GATC 8 cut(s) 223, 430, 613, 894, 1207, 1351, 1561, 1798
BstMCI CGRYCG 1 cut(s) 1726
BstMWI GCNNNNNNNGC 4 cut(s) 46, 568, 1001, 1681
BstNI CCWGG 1 cut(s) 2404
BstSCI CCNGG 1 cut(s) 2402
BstSFI CTRYAG 3 cut(s) 232, 489, 1094
BstUI CGCG 2 cut(s) 1336, 1733
BstV2I GAAGAC 1 cut(s) 134
BstX2I RGATCY 2 cut(s) 1561, 1798
BstXI CCANNNNNNTGG 1 cut(s) 1388
BstYI RGATCY 2 cut(s) 1561, 1798
BsuRI GGCC 6 cut(s) 40, 875, 1092, 1380, 1417, 2303
BtgI CCRYGG 1 cut(s) 1192
BtsCI GGATG 1 cut(s) 85
BtsIMutI CAGTG 5 cut(s) 1028, 1572, 2193, 2257, 2464
Cac8I GCNNGC 5 cut(s) 175, 691, 915, 1037, 1094
CaiI CAGNNNCTG 3 cut(s) 1319, 1546, 1684
CciI TCATGA 1 cut(s) 1524
CfoI GCGC 4 cut(s) 689, 1336, 1895, 1963
Cfr10I RCCGGY 1 cut(s) 1376
Cfr13I GGNCC 2 cut(s) 810, 873
CseI GACGC 1 cut(s) 560
Csp6I GTAC 5 cut(s) 111, 1072, 1473, 1829, 2063
CspCI CAANNNNNGTGG 4 cut(s) 927, 962, 1017, 1052
CviQI GTAC 5 cut(s) 111, 1072, 1473, 1829, 2063
DinI GGCGCC 1 cut(s) 688
DpnI GATC 8 cut(s) 225, 432, 615, 896, 1209, 1353, 1563, 1800
DpnII GATC 8 cut(s) 223, 430, 613, 894, 1207, 1351, 1561, 1798
DraIII CACNNNGTG 1 cut(s) 279
EaeI YGGCCR 3 cut(s) 38, 1378, 2301
Eam1104I CTCTTC 3 cut(s) 8, 861, 890
EarI CTCTTC 3 cut(s) 8, 861, 890
EciI GGCGGA 3 cut(s) 89, 104, 138
Eco130I CCWWGG 2 cut(s) 1125, 1192
Eco147I AGGCCT 1 cut(s) 1092
Eco31I GGTCTC 2 cut(s) 1231, 2176
Eco32I GATATC 2 cut(s) 1993, 2158
Eco47I GGWCC 1 cut(s) 810
Eco57I CTGAAG 1 cut(s) 1523
Eco72I CACGTG 1 cut(s) 955
Eco88I CYCGRG 1 cut(s) 1784
EcoNI CCTNNNNNAGG 1 cut(s) 1124
EcoO109I RGGNCCY 1 cut(s) 873
EcoRII CCWGG 1 cut(s) 2402
EcoRV GATATC 2 cut(s) 1993, 2158
EcoT14I CCWWGG 2 cut(s) 1125, 1192
EgeI GGCGCC 1 cut(s) 688
EheI GGCGCC 1 cut(s) 688
ErhI CCWWGG 2 cut(s) 1125, 1192
Esp3I CGTCTC 3 cut(s) 217, 1653, 2314
FalI AAGNNNNNCTT 2 cut(s) 129, 161
FblI GTMKAC 1 cut(s) 369
FokI GGATG 1 cut(s) 92
FspBI CTAG 4 cut(s) 180, 254, 422, 914
GlaI GCGC 4 cut(s) 688, 1335, 1894, 1962
GsaI CCCAGC 1 cut(s) 2543
HaeII RGCGCY 1 cut(s) 690
HaeIII GGCC 6 cut(s) 40, 875, 1092, 1380, 1417, 2303
HapII CCGG 6 cut(s) 41, 787, 1377, 2441, 2478, 2498
HgaI GACGC 1 cut(s) 560
HhaI GCGC 4 cut(s) 689, 1336, 1895, 1963
Hin1I GRCGYC 2 cut(s) 571, 687
Hin6I GCGC 4 cut(s) 687, 1334, 1893, 1961
HinP1I GCGC 4 cut(s) 687, 1334, 1893, 1961
HincII GTYRAC 4 cut(s) 370, 1174, 1324, 2011
HindII GTYRAC 4 cut(s) 370, 1174, 1324, 2011
HindIII AAGCTT 2 cut(s) 650, 1903
HpaII CCGG 6 cut(s) 41, 787, 1377, 2441, 2478, 2498
HphI GGTGA 9 cut(s) 361, 854, 1376, 1403, 1520, 2261, 2393, 2474, 2540
Hpy166II GTNNAC 7 cut(s) 370, 952, 1174, 1324, 1428, 1829, 2011
Hpy8I GTNNAC 7 cut(s) 370, 952, 1174, 1324, 1428, 1829, 2011
Hpy99I CGWCG 1 cut(s) 2591
HpyCH4III ACNGT 8 cut(s) 128, 493, 1290, 1422, 1432, 1472, 1724, 1915
HpyCH4IV ACGT 3 cut(s) 345, 954, 1503
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 568, 1001, 1681
HpySE526I ACGT 3 cut(s) 345, 954, 1503
Hsp92I GRCGYC 2 cut(s) 571, 687
HspAI GCGC 4 cut(s) 687, 1334, 1893, 1961
KasI GGCGCC 1 cut(s) 686
Kzo9I GATC 8 cut(s) 223, 430, 613, 894, 1207, 1351, 1561, 1798
LmnI GCTCC 7 cut(s) 164, 201, 1316, 1793, 2084, 2393, 2576
LweI GCATC 7 cut(s) 293, 632, 1552, 1684, 1757, 2149, 2405
MaeI CTAG 4 cut(s) 180, 254, 422, 914
MaeII ACGT 3 cut(s) 345, 954, 1503
MaeIII GTNAC 8 cut(s) 185, 793, 929, 955, 1309, 1409, 2449, 2493
MalI GATC 8 cut(s) 225, 432, 615, 896, 1209, 1353, 1563, 1800
MbiI CCGCTC 1 cut(s) 173
MboI GATC 8 cut(s) 223, 430, 613, 894, 1207, 1351, 1561, 1798
MfeI CAATTG 1 cut(s) 1454
MflI RGATCY 2 cut(s) 1561, 1798
MhlI GDGCHC 2 cut(s) 325, 2131
MlsI TGGCCA 1 cut(s) 2303
MluCI AATT 9 cut(s) 546, 924, 1107, 1454, 2066, 2335, 2513, 2517, 2523
MluNI TGGCCA 1 cut(s) 2303
Mly113I GGCGCC 1 cut(s) 687
MlyI GAGTC 5 cut(s) 127, 168, 1459, 1547, 2260
MmeI TCCRAC 3 cut(s) 142, 1921, 2096
Mox20I TGGCCA 1 cut(s) 2303
MroXI GAANNNNTTC 1 cut(s) 1081
MscI TGGCCA 1 cut(s) 2303
MseI TTAA 8 cut(s) 66, 192, 900, 1484, 1955, 2229, 2516, 2631
MslI CAYNNNNRTG 2 cut(s) 54, 2250
Msp20I TGGCCA 1 cut(s) 2303
MspA1I CMGCKG 2 cut(s) 201, 2369
MspCI CTTAAG 1 cut(s) 2630
MspI CCGG 6 cut(s) 41, 787, 1377, 2441, 2478, 2498
MspR9I CCNGG 1 cut(s) 2404
MunI CAATTG 1 cut(s) 1454
Mva1269I GAATGC 1 cut(s) 1478
MvaI CCWGG 1 cut(s) 2404
MvnI CGCG 2 cut(s) 1336, 1733
MwoI GCNNNNNNNGC 4 cut(s) 46, 568, 1001, 1681
NarI GGCGCC 1 cut(s) 687
NcoI CCATGG 1 cut(s) 1192
NdeII GATC 8 cut(s) 223, 430, 613, 894, 1207, 1351, 1561, 1798
NheI GCTAGC 1 cut(s) 913
NlaIV GGNNCC 4 cut(s) 166, 305, 688, 2017
NmuCI GTSAC 4 cut(s) 185, 955, 1309, 2449
NspV TTCGAA 1 cut(s) 1435
OliI CACNNNNGTG 1 cut(s) 54
PaeR7I CTCGAG 1 cut(s) 1784
PagI TCATGA 1 cut(s) 1524
PceI AGGCCT 1 cut(s) 1092
PcsI WCGNNNNNNNCGW 3 cut(s) 181, 1441, 1468
PctI GAATGC 1 cut(s) 1478
PdmI GAANNNNTTC 1 cut(s) 1081
PfeI GAWTC 7 cut(s) 637, 1082, 1115, 1814, 2501, 2544, 2560
PleI GAGTC 5 cut(s) 126, 167, 1458, 1547, 2260
PluTI GGCGCC 1 cut(s) 690
PmaCI CACGTG 1 cut(s) 955
PmlI CACGTG 1 cut(s) 955
PpsI GAGTC 5 cut(s) 126, 167, 1458, 1547, 2260
Ppu21I YACGTR 1 cut(s) 955
PshBI ATTAAT 1 cut(s) 2516
PsiI TTATAA 2 cut(s) 2175, 2603
Psp1406I AACGTT 1 cut(s) 1503
Psp6I CCWGG 1 cut(s) 2402
PspCI CACGTG 1 cut(s) 955
PspFI CCCAGC 1 cut(s) 2539
PspGI CCWGG 1 cut(s) 2402
PspN4I GGNNCC 4 cut(s) 166, 305, 688, 2017
PspPI GGNCC 2 cut(s) 810, 873
PsrI GAACNNNNNNTAC 2 cut(s) 477, 509
PstI CTGCAG 1 cut(s) 1098
PstNI CAGNNNCTG 3 cut(s) 1319, 1546, 1684
PsuI RGATCY 2 cut(s) 1561, 1798
PvuII CAGCTG 1 cut(s) 2369
RsaI GTAC 5 cut(s) 112, 1073, 1474, 1830, 2064
RsaNI GTAC 5 cut(s) 111, 1072, 1473, 1829, 2063
RseI CAYNNNNRTG 2 cut(s) 54, 2250
SalI GTCGAC 1 cut(s) 368
SaqAI TTAA 8 cut(s) 66, 192, 900, 1484, 1955, 2229, 2516, 2631
Sau3AI GATC 8 cut(s) 223, 430, 613, 894, 1207, 1351, 1561, 1798
Sau96I GGNCC 2 cut(s) 810, 873
SchI GAGTC 5 cut(s) 127, 168, 1459, 1547, 2260
ScrFI CCNGG 1 cut(s) 2404
SduI GDGCHC 2 cut(s) 325, 2131
SfaNI GCATC 7 cut(s) 293, 632, 1552, 1684, 1757, 2149, 2405
SfcI CTRYAG 3 cut(s) 232, 489, 1094
SfoI GGCGCC 1 cut(s) 688
Sfr274I CTCGAG 1 cut(s) 1784
SfuI TTCGAA 1 cut(s) 1435
SinI GGWCC 1 cut(s) 810
SlaI CTCGAG 1 cut(s) 1784
SmiMI CAYNNNNRTG 2 cut(s) 54, 2250
SmlI CTYRAG 2 cut(s) 1784, 2630
SmoI CTYRAG 2 cut(s) 1784, 2630
Sse9I AATT 9 cut(s) 546, 924, 1107, 1454, 2066, 2335, 2513, 2517, 2523
SseBI AGGCCT 1 cut(s) 1092
SspDI GGCGCC 1 cut(s) 686
SspI AATATT 1 cut(s) 1766
SspMI CTAG 4 cut(s) 180, 254, 422, 914
StuI AGGCCT 1 cut(s) 1092
StyD4I CCNGG 1 cut(s) 2402
StyI CCWWGG 2 cut(s) 1125, 1192
TaaI ACNGT 8 cut(s) 128, 493, 1290, 1422, 1432, 1472, 1724, 1915
TaiI ACGT 3 cut(s) 348, 957, 1506
TasI AATT 9 cut(s) 546, 924, 1107, 1454, 2066, 2335, 2513, 2517, 2523
TatI WGTACW 1 cut(s) 2062
TauI GCSGC 3 cut(s) 89, 154, 2296
TfiI GAWTC 7 cut(s) 637, 1082, 1115, 1814, 2501, 2544, 2560
Tru1I TTAA 8 cut(s) 66, 192, 900, 1484, 1955, 2229, 2516, 2631
Tru9I TTAA 8 cut(s) 66, 192, 900, 1484, 1955, 2229, 2516, 2631
TscAI CASTG 5 cut(s) 1035, 1572, 2193, 2257, 2464
TseFI GTSAC 4 cut(s) 185, 955, 1309, 2449
Tsp45I GTSAC 4 cut(s) 185, 955, 1309, 2449
TspGWI ACGGA 3 cut(s) 1998, 2028, 2338
TspRI CASTG 5 cut(s) 1035, 1572, 2193, 2257, 2464
Vha464I CTTAAG 1 cut(s) 2630
VpaK11BI GGWCC 1 cut(s) 810
VspI ATTAAT 1 cut(s) 2516
XagI CCTNNNNNAGG 1 cut(s) 1124
XapI RAATTY 1 cut(s) 546
XhoI CTCGAG 1 cut(s) 1784
XmiI GTMKAC 1 cut(s) 369
XmnI GAANNNNTTC 1 cut(s) 1081
XspI CTAG 4 cut(s) 180, 254, 422, 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.