Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009795

Physical Location & Seq

Genomic Coordinates Reverse (-)

10054183 .. 10058288

Gene Structure 4106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00169400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGTTGGGAGGTTCAATGGCAATGTGTGGCCAAGAGCTGGAGCAAATGTCCAGTGTCGATCAGGGAAGTCAGTATAGCCTCTCCGATGGCATTTTGCCTTCTCTTGGTGCTGCCTCTCGTAACCACCGCAGACCGAAACTACGTCGTGTTGGCAGTCGTTTCTCATATTGTTGGTGTTCTACACGGCATGGGTGTGTCCCCTTTGAATTTGGGTTCCTGGACAGTCCAAAAGGGCCTCTGGCTATTACTGATAATGTTGTCAATGCCTTTTTTGGCATTGATATTAGCTTGACGTTCTTTGTGGCTTTCCTTGATAAAACTTCTTATTTGCTCATTGATGCCCCAAAGTTAATTGCTCTGAGATATGCCAAGACCTGGTTGGCCTTTGACATCATCTCCATTATCCCTTCAGAATTTGCTCAAGCGGTTTTGCCTCATCCTCTTGCGAATTATGGATACTTCAATATTCTTCGGCTATGGCGTCTCCGAAGAGTCAGTGCAATGTTTGCCAGATTGGAAAAAGATCGGAATTATAGCTACTTCTGGGTTCGATGCTGCAAGCTTATCTTTGTTACTCTGTTTACAGTTCATTGTGGGGGCTGCATCTTCTACTTCCTTGCTGCGAATTATCGTGATCCTAAAAGGACATGGCTTGGGCTTATCTCAGATAACTTTAACGATATAAGTTTGTGGAACCGGTATGTGACATCAATGTACTGGTCCATAATCACGCTCACGACCACCGGCTATGGTGATTTGCATCCTGTAAATACTCAAGAAATGATTTTCGATATCTTCTATATGCTCTTTAATGTTGGGCTGCAAGCTTACCTGATTGGAAATATGACCAACTTAATCGTCCATGGGACTGCTCGAACTAGACAATTTGTCGCGGAGATGAAGGCCGAGTATTTTCCTCCGAAAGAAGATGTCATCTTGCAGAATGAAGCGCCCACTGACATGTATATAGTGGTTACTGGTTCTGTGGTATTTAGTGAAGCAAAGACAGGAGATGTTTTTGGTGCCATAGGTGTGCTGTGTTACAGGCCACAACTGTTCACAGTTCGGACGAAGGGACTCTGTCAACTGCTGCGTTTGAATAGGACAGCTTTCTTGAATATTGTTCAGGCAAATGTTGGAGATGGGACAATTATCATGAGCAATTTTCTTCAGCATTTGAGAGAAAAGAAGGATCCCATAATGGAAGGAATTCTAACAGATGTAGAACATATGCTGGCTAGGGGAAAGATGGACATGCCTCTTAGTTTAGGGTTTGCTGCAAAGAGGAGTGATGATTTGTTGCTACATCAATTGCTAAGACGGGGTGCAGATCCAAATGAGACAGATCATACAGGCCGGACAGCTATGCACATTGCAGCATCAAATGGAAGTCAGCATTGTGCGACTTTACTTCTAGAGTATGGAGGTGATCCTAACATCAAAGATTGTGAAGAAAATGTTCCTCTATGGGAAGCAATAATGGGCAAACATGAATCTTTGATTAAACTTCTCTTAGAAAATGGAGCTGAGATTAGTTCTGGCAATGTGGGCCATTATGCTTGTGCTGCTGTTGAGCAAAACAACTTAGAGCTGCTCAAAGACATTGTCCGATATGGTGGTGATGTTACATTGCCCAAGACCGATGGGACTACAGCACTCCATACAGCAGTGAGTGAAGGAAATTCTGAGATAGTTAAGTTCCTCTTAGAACAAGGAGCTGATGCTGACAATAGGGATAGCTATGGATGGAGTCCGAGGGCTTTGGCAGAGCATCAGGGACATGAAGAAATAATGGAGCTATTTCAGCACAAATCTGGAGTTAAGAAACCAACTACCGCTCCTCCGCCAAACGATCCTCAGCTACCACGCCTTGTGAAGTTCCAGAGTGAGCCCATTATACCACCCTATGTCCGGGATGGCAGGCCAAACTCAGAAACACGGTGGTTGGATGATACTCGGATAAGAAGGTTCAACAACTTTCCCAATTCGCTTTTTGGGATCATGTCAGCTGCCAATACCGGTGAGAGAGACAAAGACCTCATCAAACCTGCAGCCAATTTTGTCCTTGGTGGCCGTAGTAAGAACAAATATCCAGCCAGAGTTACTCTTAGTTGCCCAGAAAAAAGTGGAACTGCTGCAAAGCTTGTGGTTGTGCCAGAGTCCCTTCAACAATTACTTGACATCGGTGCCAAAAAATTTCAGTTTTGTCCCACTAAAGTTTTAACCACAGAAGGAGCTGAAGTTGAAGATATAGAGCTTGTTAGGGATGGTGATCATCTTGTTCTTGTTGGTGATGGTGAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 Ion_trans KHA cNMP_binding

Protein Analysis

768

Amino Acids

85.86

Weight (kDa)

6.37

Isoelectric Point (pI)

41.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	58 - 293	1.4e-38	Ion transport protein
Ion_trans_2	PF07885	195 - 286	6.2e-12	Ion channel
cNMP_binding	PF00027	304 - 378	1.7e-08	Cyclic nucleotide-binding domain
Ank_2	PF12796	424 - 513	6.1e-16	Ankyrin repeats (3 copies)
Ank_4	PF13637	426 - 472	1.8e-06	Ankyrin repeats (many copies)
Ank	PF00023	452 - 482	1.5e-06	Ankyrin repeat
Ank_4	PF13637	521 - 569	9.1e-06	Ankyrin repeats (many copies)
Ank_2	PF12796	522 - 604	6.9e-14	Ankyrin repeats (3 copies)
Ank_5	PF13857	541 - 589	5.6e-09	Ankyrin repeats (many copies)
Ank	PF00023	548 - 579	1.1e-07	Ankyrin repeat
KHA	PF11834	700 - 762	2.8e-21	KHA, dimerisation domain of potassium ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25600 AT4G32500
fragaria_vesca	FvH4_2g29700 FvH4_2g29700 FvH4_2g29700
malus_domestica	MD08G1142800.v1.1 MD15G1119300.v1.1
prunus_persica	Prupe.1G472600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0298701
rosa_laevigata	RLG00000011492
rosa_multiflora	Rmu_co8298943.1_g000001 Rmu_sc0008099.1_g000002 Rmu_sc0008142.1_g000002 Rmu_sc0032030.1_g000001
rosa_roxburghii	Rroxscaffold_7G00169400
rosa_rugosa	Rorug06G0282700
rosa_samantha	Rh6AG393800 Rh6BG401600 Rh6CG407500 Rh6DG394100
rosa_wichuraiana	Rw6G034430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2056
AccB1I	GGYRCC	2 cut(s)	1022, 2186
AccB7I	CCANNNNNTGG	2 cut(s)	37, 375
AccBSI	CCGCTC	1 cut(s)	1838
AccII	CGCG	1 cut(s)	893
AciI	CCGC	5 cut(s)	127, 425, 893, 1836, 1844
AclWI	GGATC	7 cut(s)	629, 1187, 1200, 1325, 1424, 1847, 2006
AcoI	YGGCCR	2 cut(s)	28, 2071
AcsI	RAATTY	5 cut(s)	206, 413, 1209, 1681, 2195
AcuI	CTGAAG	3 cut(s)	393, 1154, 2259
AcyI	GRCGYC	1 cut(s)	481
AfaI	GTAC	1 cut(s)	716
AfiI	CCNNNNNNNGG	4 cut(s)	37, 104, 375, 1911
AflIII	ACRYGT	1 cut(s)	960
AgeI	ACCGGT	2 cut(s)	696, 2018
AgsI	TTSAA	8 cut(s)	15, 206, 463, 1099, 1117, 1972, 2168, 2246
AhdI	GACNNNNNGTC	1 cut(s)	887
AjnI	CCWGG	2 cut(s)	216, 374
Alw26I	GTCTC	3 cut(s)	488, 1334, 2022
AlwI	GGATC	7 cut(s)	629, 1187, 1200, 1325, 1424, 1847, 2006
AoxI	GGCC	9 cut(s)	28, 233, 381, 903, 1046, 1354, 1549, 1922, 2071
ApoI	RAATTY	5 cut(s)	206, 413, 1209, 1681, 2195
ArsI	GACNNNNNNTTYG	2 cut(s)	1590, 1622
AsiGI	ACCGGT	2 cut(s)	696, 2018
Asp700I	GAANNNNTTC	2 cut(s)	1209, 1458
AspLEI	GCGC	1 cut(s)	952
AspS9I	GGNCC	3 cut(s)	233, 720, 1549
AsuC2I	CCSGG	1 cut(s)	1913
AsuHPI	GGTGA	6 cut(s)	764, 1439, 1631, 2033, 2282, 2303
AvaII	GGWCC	1 cut(s)	720
BalI	TGGCCA	1 cut(s)	30
BamHI	GGATCC	1 cut(s)	1192
BanI	GGYRCC	2 cut(s)	1022, 2186
BanII	GRGCYC	1 cut(s)	1893
BbvCI	CCTCAGC	1 cut(s)	1857
BccI	CCATC	8 cut(s)	80, 1136, 1243, 1637, 1740, 1910, 2261, 2288
BceAI	ACGGC	2 cut(s)	200, 2058
BciT130I	CCWGG	2 cut(s)	218, 376
BciVI	GTATCC	1 cut(s)	449
BclI	TGATCA	1 cut(s)	2272
BcnI	CCSGG	1 cut(s)	1913
BcoDI	GTCTC	3 cut(s)	488, 1334, 2022
BfaI	CTAG	3 cut(s)	879, 1239, 1415
BfmI	CTRYAG	2 cut(s)	1650, 2049
BfoI	RGCGCY	1 cut(s)	953
BfuAI	ACCTGC	1 cut(s)	2056
BfuI	GTATCC	1 cut(s)	449
Bme1390I	CCNGG	3 cut(s)	218, 376, 1913
Bme18I	GGWCC	1 cut(s)	720
BmeRI	GACNNNNNGTC	1 cut(s)	887
BmgT120I	GGNCC	3 cut(s)	233, 720, 1549
BmiI	GGNNCC	5 cut(s)	215, 695, 1024, 1194, 2188
BmrFI	CCNGG	3 cut(s)	218, 376, 1913
BmsI	GCATC	7 cut(s)	328, 542, 612, 769, 1388, 1711, 1780
BpmI	CTGGAG	2 cut(s)	59, 1836
Bpu10I	CCTNAGC	1 cut(s)	1857
BpuEI	CTTGAG	2 cut(s)	405, 759
BpuMI	CCSGG	1 cut(s)	1913
BsaBI	GATNNNNATC	2 cut(s)	759, 2271
BsaHI	GRCGYC	1 cut(s)	481
BsaJI	CCNNGG	3 cut(s)	862, 1754, 2065
BsaWI	WCCGGW	2 cut(s)	696, 2018
Bsc4I	CCNNNNNNNGG	4 cut(s)	37, 104, 375, 1911
Bse118I	RCCGGY	3 cut(s)	696, 743, 2018
Bse1I	ACTGG	3 cut(s)	51, 722, 982
Bse3DI	GCAATG	5 cut(s)	27, 507, 1371, 1549, 1628
Bse8I	GATNNNNATC	2 cut(s)	759, 2271
BseBI	CCWGG	2 cut(s)	218, 376
BseDI	CCNNGG	3 cut(s)	862, 1754, 2065
BseGI	GGATG	6 cut(s)	436, 760, 1751, 1921, 1954, 2272
BseJI	GATNNNNATC	2 cut(s)	759, 2271
BseLI	CCNNNNNNNGG	4 cut(s)	37, 104, 375, 1911
BseMI	GCAATG	5 cut(s)	27, 507, 1371, 1549, 1628
BseMII	CTCAG	6 cut(s)	350, 678, 1518, 1677, 1871, 1944
BseNI	ACTGG	3 cut(s)	51, 722, 982
BseRI	GAGGAG	2 cut(s)	1300, 1830
BsgI	GTGCAG	1 cut(s)	1347
Bsh1236I	CGCG	1 cut(s)	893
BshFI	GGCC	9 cut(s)	30, 235, 383, 905, 1048, 1356, 1551, 1924, 2073
BshNI	GGYRCC	2 cut(s)	1022, 2186
BshTI	ACCGGT	2 cut(s)	696, 2018
BsiSI	CCGG	5 cut(s)	697, 744, 1357, 1912, 2019
BslFI	GGGAC	8 cut(s)	182, 880, 1089, 1159, 1660, 1791, 2146, 2193
BslI	CCNNNNNNNGG	4 cut(s)	37, 104, 375, 1911
BsmAI	GTCTC	3 cut(s)	488, 1334, 2022
BsmBI	CGTCTC	1 cut(s)	488
BsmFI	GGGAC	8 cut(s)	182, 880, 1089, 1159, 1660, 1791, 2146, 2193
BsnI	GGCC	9 cut(s)	30, 235, 383, 905, 1048, 1356, 1551, 1924, 2073
Bsp1286I	GDGCHC	1 cut(s)	1893
Bsp19I	CCATGG	1 cut(s)	862
BspACI	CCGC	5 cut(s)	127, 425, 893, 1836, 1844
BspANI	GGCC	9 cut(s)	30, 235, 383, 905, 1048, 1356, 1551, 1924, 2073
BspCNI	CTCAG	6 cut(s)	351, 677, 1519, 1678, 1870, 1943
BspFNI	CGCG	1 cut(s)	893
BspHI	TCATGA	1 cut(s)	1155
BspLI	GGNNCC	5 cut(s)	215, 695, 1024, 1194, 2188
BspMAI	CTGCAG	1 cut(s)	2053
BspMI	ACCTGC	1 cut(s)	2056
BspPI	GGATC	7 cut(s)	629, 1187, 1200, 1325, 1424, 1847, 2006
BspT107I	GGYRCC	2 cut(s)	1022, 2186
BsrBI	CCGCTC	1 cut(s)	1838
BsrDI	GCAATG	5 cut(s)	27, 507, 1371, 1549, 1628
BsrFI	RCCGGY	3 cut(s)	696, 743, 2018
BsrI	ACTGG	3 cut(s)	51, 722, 982
BssAI	RCCGGY	3 cut(s)	696, 743, 2018
BssECI	CCNNGG	3 cut(s)	862, 1754, 2065
BssNI	GRCGYC	1 cut(s)	481
BssT1I	CCWWGG	2 cut(s)	862, 2065
Bst2UI	CCWGG	2 cut(s)	218, 376
Bst4CI	ACNGT	5 cut(s)	224, 586, 1056, 1063, 1941
Bst6I	CTCTTC	1 cut(s)	484
BstACI	GRCGYC	1 cut(s)	481
BstAPI	GCANNNNNTGC	1 cut(s)	506
BstC8I	GCNNGC	4 cut(s)	560, 825, 1236, 1922
BstDSI	CCRYGG	1 cut(s)	862
BstF5I	GGATG	6 cut(s)	436, 760, 1751, 1921, 1954, 2272
BstFNI	CGCG	1 cut(s)	893
BstH2I	RGCGCY	1 cut(s)	953
BstHHI	GCGC	1 cut(s)	952
BstMAI	GTCTC	3 cut(s)	488, 1334, 2022
BstMWI	GCNNNNNNNGC	4 cut(s)	506, 1548, 1565, 1804
BstNI	CCWGG	2 cut(s)	218, 376
BstNSI	RCATGY	2 cut(s)	964, 1258
BstSCI	CCNGG	3 cut(s)	216, 374, 1911
BstSFI	CTRYAG	2 cut(s)	1650, 2049
BstUI	CGCG	1 cut(s)	893
BstX2I	RGATCY	2 cut(s)	1192, 1330
BstYI	RGATCY	2 cut(s)	1192, 1330
BsuI	GTATCC	1 cut(s)	449
BsuRI	GGCC	9 cut(s)	30, 235, 383, 905, 1048, 1356, 1551, 1924, 2073
BtgI	CCRYGG	1 cut(s)	862
BtsCI	GGATG	6 cut(s)	436, 760, 1751, 1921, 1954, 2272
BtsI	GCAGTG	1 cut(s)	1674
BtsIMutI	CAGTG	4 cut(s)	58, 502, 954, 1674
BveI	ACCTGC	1 cut(s)	2056
Cac8I	GCNNGC	4 cut(s)	560, 825, 1236, 1922
CciI	TCATGA	1 cut(s)	1155
CfoI	GCGC	1 cut(s)	952
Cfr10I	RCCGGY	3 cut(s)	696, 743, 2018
Cfr13I	GGNCC	3 cut(s)	233, 720, 1549
CseI	GACGC	1 cut(s)	470
CsiI	ACCWGGT	1 cut(s)	374
Csp6I	GTAC	1 cut(s)	715
CspAI	ACCGGT	2 cut(s)	696, 2018
CspCI	CAANNNNNGTGG	2 cut(s)	2127, 2162
CviAII	CATG	9 cut(s)	188, 648, 863, 961, 1156, 1255, 1490, 1781, 2002
CviQI	GTAC	1 cut(s)	715
DriI	GACNNNNNGTC	1 cut(s)	887
EaeI	YGGCCR	2 cut(s)	28, 2071
Eam1104I	CTCTTC	1 cut(s)	484
Eam1105I	GACNNNNNGTC	1 cut(s)	887
EarI	CTCTTC	1 cut(s)	484
EciI	GGCGGA	1 cut(s)	1833
Eco130I	CCWWGG	2 cut(s)	862, 2065
Eco24I	GRGCYC	1 cut(s)	1893
Eco32I	GATATC	1 cut(s)	793
Eco47I	GGWCC	1 cut(s)	720
Eco57I	CTGAAG	3 cut(s)	393, 1154, 2259
EcoO109I	RGGNCCY	1 cut(s)	233
EcoRI	GAATTC	1 cut(s)	1209
EcoRII	CCWGG	2 cut(s)	216, 374
EcoRV	GATATC	1 cut(s)	793
EcoT14I	CCWWGG	2 cut(s)	862, 2065
EcoT38I	GRGCYC	1 cut(s)	1893
ErhI	CCWWGG	2 cut(s)	862, 2065
Esp3I	CGTCTC	1 cut(s)	488
FaeI	CATG	9 cut(s)	191, 651, 866, 964, 1159, 1258, 1493, 1784, 2005
FalI	AAGNNNNNCTT	4 cut(s)	551, 583, 1688, 1720
FaqI	GGGAC	8 cut(s)	182, 880, 1089, 1159, 1660, 1791, 2146, 2193
FatI	CATG	9 cut(s)	187, 647, 862, 960, 1155, 1254, 1489, 1780, 2001
FauNDI	CATATG	1 cut(s)	1230
FbaI	TGATCA	1 cut(s)	2272
FokI	GGATG	6 cut(s)	423, 747, 1758, 1928, 1961, 2279
FriOI	GRGCYC	1 cut(s)	1893
FspBI	CTAG	3 cut(s)	879, 1239, 1415
GlaI	GCGC	1 cut(s)	951
GsuI	CTGGAG	2 cut(s)	59, 1836
HaeII	RGCGCY	1 cut(s)	953
HaeIII	GGCC	9 cut(s)	30, 235, 383, 905, 1048, 1356, 1551, 1924, 2073
HapII	CCGG	5 cut(s)	697, 744, 1357, 1912, 2019
HgaI	GACGC	1 cut(s)	470
HhaI	GCGC	1 cut(s)	952
Hin1I	GRCGYC	1 cut(s)	481
Hin1II	CATG	9 cut(s)	191, 651, 866, 964, 1159, 1258, 1493, 1784, 2005
Hin6I	GCGC	1 cut(s)	950
HinP1I	GCGC	1 cut(s)	950
HincII	GTYRAC	1 cut(s)	1085
HindII	GTYRAC	1 cut(s)	1085
HindIII	AAGCTT	3 cut(s)	560, 825, 2141
HinfI	GANTC	5 cut(s)	492, 1077, 1493, 1750, 2159
HpaII	CCGG	5 cut(s)	697, 744, 1357, 1912, 2019
HphI	GGTGA	6 cut(s)	764, 1439, 1631, 2033, 2282, 2303
Hpy166II	GTNNAC	3 cut(s)	582, 1059, 1085
Hpy188III	TCNNGA	8 cut(s)	632, 736, 776, 1114, 1156, 1415, 1815, 1882
Hpy8I	GTNNAC	3 cut(s)	582, 1059, 1085
Hpy99I	CGWCG	1 cut(s)	147
HpyCH4III	ACNGT	5 cut(s)	224, 586, 1056, 1063, 1941
HpyCH4IV	ACGT	2 cut(s)	142, 293
HpyF10VI	GCNNNNNNNGC	4 cut(s)	506, 1548, 1565, 1804
HpySE526I	ACGT	2 cut(s)	142, 293
Hsp92I	GRCGYC	1 cut(s)	481
Hsp92II	CATG	9 cut(s)	191, 651, 866, 964, 1159, 1258, 1493, 1784, 2005
HspAI	GCGC	1 cut(s)	950
Ksp22I	TGATCA	1 cut(s)	2272
LmnI	GCTCC	6 cut(s)	40, 1523, 1715, 1795, 1843, 2234
LweI	GCATC	7 cut(s)	328, 542, 612, 769, 1388, 1711, 1780
MabI	ACCWGGT	1 cut(s)	374
MaeI	CTAG	3 cut(s)	879, 1239, 1415
MaeII	ACGT	2 cut(s)	142, 293
MaeIII	GTNAC	7 cut(s)	119, 571, 703, 973, 1040, 1624, 2101
MbiI	CCGCTC	1 cut(s)	1838
MboII	GAAGA	9 cut(s)	461, 501, 598, 787, 938, 1160, 1463, 1796, 2258
MfeI	CAATTG	1 cut(s)	1310
MflI	RGATCY	2 cut(s)	1192, 1330
MhlI	GDGCHC	1 cut(s)	1893
MlsI	TGGCCA	1 cut(s)	30
MluNI	TGGCCA	1 cut(s)	30
MlyI	GAGTC	4 cut(s)	501, 1071, 1759, 2168
MmeI	TCCRAC	2 cut(s)	1117, 1926
Mox20I	TGGCCA	1 cut(s)	30
MroXI	GAANNNNTTC	2 cut(s)	1209, 1458
MscI	TGGCCA	1 cut(s)	30
MseI	TTAA	8 cut(s)	350, 675, 810, 854, 1503, 1695, 1821, 2222
MslI	CAYNNNNRTG	3 cut(s)	192, 959, 1031
Msp20I	TGGCCA	1 cut(s)	30
MspA1I	CMGCKG	1 cut(s)	2009
MspI	CCGG	5 cut(s)	697, 744, 1357, 1912, 2019
MspR9I	CCNGG	3 cut(s)	218, 376, 1913
MunI	CAATTG	1 cut(s)	1310
MvaI	CCWGG	2 cut(s)	218, 376
MvnI	CGCG	1 cut(s)	893
MwoI	GCNNNNNNNGC	4 cut(s)	506, 1548, 1565, 1804
NciI	CCSGG	1 cut(s)	1913
NcoI	CCATGG	1 cut(s)	862
NdeI	CATATG	1 cut(s)	1230
NlaIII	CATG	9 cut(s)	191, 651, 866, 964, 1159, 1258, 1493, 1784, 2005
NlaIV	GGNNCC	5 cut(s)	215, 695, 1024, 1194, 2188
NmeAIII	GCCGAG	1 cut(s)	931
NmuCI	GTSAC	1 cut(s)	703
NspI	RCATGY	2 cut(s)	964, 1258
PagI	TCATGA	1 cut(s)	1155
PciI	ACATGT	1 cut(s)	960
PcsI	WCGNNNNNNNCGW	1 cut(s)	478
PdmI	GAANNNNTTC	2 cut(s)	1209, 1458
PfeI	GAWTC	1 cut(s)	1493
PflFI	GACNNNGTC	2 cut(s)	1080, 1604
PflMI	CCANNNNNTGG	2 cut(s)	37, 375
PfoI	TCCNGGA	2 cut(s)	216, 1911
PinAI	ACCGGT	2 cut(s)	696, 2018
PleI	GAGTC	4 cut(s)	500, 1071, 1758, 2167
PpsI	GAGTC	4 cut(s)	500, 1071, 1758, 2167
PscI	ACATGT	1 cut(s)	960
Psp6I	CCWGG	2 cut(s)	216, 374
PspGI	CCWGG	2 cut(s)	216, 374
PspN4I	GGNNCC	5 cut(s)	215, 695, 1024, 1194, 2188
PspPI	GGNCC	3 cut(s)	233, 720, 1549
PstI	CTGCAG	1 cut(s)	2053
PsuI	RGATCY	2 cut(s)	1192, 1330
PsyI	GACNNNGTC	2 cut(s)	1080, 1604
PvuII	CAGCTG	1 cut(s)	2009
RsaI	GTAC	1 cut(s)	716
RsaNI	GTAC	1 cut(s)	715
RseI	CAYNNNNRTG	3 cut(s)	192, 959, 1031
SaqAI	TTAA	8 cut(s)	350, 675, 810, 854, 1503, 1695, 1821, 2222
Sau96I	GGNCC	3 cut(s)	233, 720, 1549
SchI	GAGTC	4 cut(s)	501, 1071, 1759, 2168
ScrFI	CCNGG	3 cut(s)	218, 376, 1913
SduI	GDGCHC	1 cut(s)	1893
SexAI	ACCWGGT	1 cut(s)	374
SfaNI	GCATC	7 cut(s)	328, 542, 612, 769, 1388, 1711, 1780
SfcI	CTRYAG	2 cut(s)	1650, 2049
SinI	GGWCC	1 cut(s)	720
SmiMI	CAYNNNNRTG	3 cut(s)	192, 959, 1031
SmlI	CTYRAG	2 cut(s)	420, 774
SmoI	CTYRAG	2 cut(s)	420, 774
SsiI	CCGC	5 cut(s)	127, 425, 893, 1836, 1844
SspI	AATATT	2 cut(s)	466, 1120
SspMI	CTAG	3 cut(s)	879, 1239, 1415
StyD4I	CCNGG	3 cut(s)	216, 374, 1911
StyI	CCWWGG	2 cut(s)	862, 2065
TaaI	ACNGT	5 cut(s)	224, 586, 1056, 1063, 1941
TaiI	ACGT	2 cut(s)	145, 296
TaqI	TCGA	4 cut(s)	57, 550, 789, 874
TaqII	GACCGA	2 cut(s)	148, 1655
TatI	WGTACW	1 cut(s)	714
TfiI	GAWTC	1 cut(s)	1493
Tru1I	TTAA	8 cut(s)	350, 675, 810, 854, 1503, 1695, 1821, 2222
Tru9I	TTAA	8 cut(s)	350, 675, 810, 854, 1503, 1695, 1821, 2222
TscAI	CASTG	4 cut(s)	58, 502, 961, 1674
TseFI	GTSAC	1 cut(s)	703
Tsp45I	GTSAC	1 cut(s)	703
TspDTI	ATGAA	5 cut(s)	578, 914, 960, 1506, 1797
TspRI	CASTG	4 cut(s)	58, 502, 961, 1674
Tth111I	GACNNNGTC	2 cut(s)	1080, 1604
Van91I	CCANNNNNTGG	2 cut(s)	37, 375
VpaK11BI	GGWCC	1 cut(s)	720
XapI	RAATTY	5 cut(s)	206, 413, 1209, 1681, 2195
XbaI	TCTAGA	1 cut(s)	1414
XceI	RCATGY	2 cut(s)	964, 1258
XcmI	CCANNNNNNNNNTGG	1 cut(s)	376
XmnI	GAANNNNTTC	2 cut(s)	1209, 1458
XspI	CTAG	3 cut(s)	879, 1239, 1415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.