Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010369

Physical Location & Seq

Genomic Coordinates Reverse (-)

11447169 .. 11448949

Gene Structure 1781 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G26840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 822 bp

ATGGCAACGACAGTGTACGGCCAAGCGTCGCTGCCACAGATGCATAGTCTTTTCTCAAAGGTCAGGCCTTTTCTCTCTCACTCGCCGTCTTTCACAGCTCCGTTCACTCGTCGGCGGAGTTTCCCGTTTAGTGCTCTTCCTACGACGAAAGCCATAGACGCGGCGTTAATGAAGGAGAAATGGTTGGATTCTCTCTCTCTCACCTCACAAGACGAAGATACGACTCCGGAGAATGCTGAGTCAAGCTGTATCATTGGGATTGACCCTGATTTGTCTGGTGCGTTGGCTCTTTTGAAATTTGACCACTTGGGTTCTTCTTCTTTTGCTCAGGTTTATGATACACCTCACATTCCAGTTTTAGTTGGGAAAAGAGTAAGAAAACGTTTGGATGCAAAGTCAATTGTACAATTGATTCAGAGCTTAGATGTTCCCTCAGGAAGCAGAGTGTATATAGAACAATCGAATCCGTTTCCCAAAGATGGAAAACAGGGTTGGTATAGTGGAGGATTTGGATATGGATTATGGATAGGAACACTTGTTGCTTCAGGCTTTTGTGTTATTCCGGTTTCCGCATCTTTATGGAAGAGGCATTTTCAACTTGCTAGTGGAAGTTGCACAAAGGACGATAGCAGACGAGTTGCAGCGGAGTTGTTTCCATCGCTTAGTTCGCAACTTAAGAGGAAAAAGGATCATGGTCGAGCTGAAGCACTGCTCATTGCGGCGTATGGTGAAGCCCTTAAAACAGAGAAATTGTTGATCCAGCCAAAGGAATTACTCTCTCAAGTTAACTACTTAGAAAACCAGTTAGTGGAGGTTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

273

Amino Acids

30.05

Weight (kDa)

9.15

Isoelectric Point (pI)

58.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26840 AT2G26840
fragaria_vesca	FvH4_2g35650
malus_domestica	MD00G1134800.v1.1 MD00G1148000.v1.1
prunus_persica	Prupe.4G260500_v2.0.a1 Prupe.4G260500_v2.0.a1 Prupe.4G260500_v2.0.a1 Prupe.4G260500_v2.0.a1
pyrus_communis	pycom12561g00250 pycom5153684g00050
rosa_chinensis	RchiOBHm_Chr5g0050271
rosa_laevigata	RLG00000034692
rosa_multiflora	Rmu_sc0000889.1_g000003
rosa_roxburghii	Rroxscaffold_1G00030760
rosa_rugosa	Rorug05G0259800
rosa_samantha	Rh5AG331300 Rh5BG341900 Rh5CG369000 Rh5DG354800
rosa_wichuraiana	Rw5G031310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	808
AccII	CGCG	1 cut(s)	161
AccIII	TCCGGA	1 cut(s)	226
AciI	CCGC	5 cut(s)	115, 161, 570, 644, 719
AclI	AACGTT	1 cut(s)	382
AclWI	GGATC	2 cut(s)	696, 751
AcoI	YGGCCR	1 cut(s)	19
AcsI	RAATTY	1 cut(s)	296
AcuI	CTGAAG	2 cut(s)	528, 723
AfaI	GTAC	2 cut(s)	17, 405
AfiI	CCNNNNNNNGG	3 cut(s)	479, 766, 808
AflII	CTTAAG	1 cut(s)	674
AgsI	TTSAA	2 cut(s)	295, 596
AjuI	GAANNNNNNNTTGG	2 cut(s)	475, 507
AluBI	AGCT	4 cut(s)	98, 246, 420, 701
AluI	AGCT	4 cut(s)	98, 246, 420, 701
Alw21I	GWGCWC	1 cut(s)	136
AlwI	GGATC	2 cut(s)	696, 751
Aor13HI	TCCGGA	1 cut(s)	226
AoxI	GGCC	2 cut(s)	19, 65
ApeKI	GCWGC	2 cut(s)	31, 641
ApoI	RAATTY	1 cut(s)	296
AsuHPI	GGTGA	2 cut(s)	193, 740
AxyI	CCTNAGG	1 cut(s)	433
Bbv12I	GWGCWC	1 cut(s)	136
BbvI	GCAGC	2 cut(s)	18, 653
BccI	CCATC	2 cut(s)	473, 664
BceAI	ACGGC	2 cut(s)	34, 70
BfaI	CTAG	1 cut(s)	603
BfrI	CTTAAG	1 cut(s)	674
BisI	GCNGC	4 cut(s)	32, 162, 642, 720
BlsI	GCNGC	4 cut(s)	33, 163, 643, 721
BmsI	GCATC	3 cut(s)	30, 379, 581
Bpu10I	CCTNAGC	1 cut(s)	327
BpuEI	CTTGAG	1 cut(s)	765
BsaWI	WCCGGW	2 cut(s)	226, 562
BsaXI	ACNNNNNCTCC	2 cut(s)	167, 197
Bsc4I	CCNNNNNNNGG	3 cut(s)	479, 766, 808
Bse1I	ACTGG	2 cut(s)	353, 802
Bse21I	CCTNAGG	1 cut(s)	433
Bse3DI	GCAATG	1 cut(s)	714
BseAI	TCCGGA	1 cut(s)	226
BseGI	GGATG	1 cut(s)	394
BseLI	CCNNNNNNNGG	3 cut(s)	479, 766, 808
BseMI	GCAATG	1 cut(s)	714
BseMII	CTCAG	3 cut(s)	228, 341, 447
BseNI	ACTGG	2 cut(s)	353, 802
BseXI	GCAGC	2 cut(s)	18, 653
Bsh1236I	CGCG	1 cut(s)	161
BshFI	GGCC	2 cut(s)	21, 67
BsiHKAI	GWGCWC	1 cut(s)	136
BsiSI	CCGG	2 cut(s)	227, 563
BslI	CCNNNNNNNGG	3 cut(s)	479, 766, 808
BsmI	GAATGC	1 cut(s)	238
BsnI	GGCC	2 cut(s)	21, 67
Bsp1286I	GDGCHC	1 cut(s)	136
Bsp13I	TCCGGA	1 cut(s)	226
Bsp1407I	TGTACA	1 cut(s)	403
Bsp143I	GATC	2 cut(s)	688, 756
BspACI	CCGC	5 cut(s)	115, 161, 570, 644, 719
BspANI	GGCC	2 cut(s)	21, 67
BspCNI	CTCAG	3 cut(s)	229, 340, 446
BspEI	TCCGGA	1 cut(s)	226
BspFNI	CGCG	1 cut(s)	161
BspPI	GGATC	2 cut(s)	696, 751
BspQI	GCTCTTC	1 cut(s)	141
BspTI	CTTAAG	1 cut(s)	674
BsrDI	GCAATG	1 cut(s)	714
BsrGI	TGTACA	1 cut(s)	403
BsrI	ACTGG	2 cut(s)	353, 802
BssMI	GATC	2 cut(s)	688, 756
Bst4CI	ACNGT	1 cut(s)	13
Bst6I	CTCTTC	2 cut(s)	141, 578
BstAFI	CTTAAG	1 cut(s)	674
BstAUI	TGTACA	1 cut(s)	403
BstDEI	CTNAG	6 cut(s)	237, 327, 421, 433, 662, 793
BstF5I	GGATG	1 cut(s)	394
BstFNI	CGCG	1 cut(s)	161
BstKTI	GATC	2 cut(s)	691, 759
BstMBI	GATC	2 cut(s)	688, 756
BstMWI	GCNNNNNNNGC	3 cut(s)	40, 158, 667
BstUI	CGCG	1 cut(s)	161
BstV1I	GCAGC	2 cut(s)	18, 653
Bsu36I	CCTNAGG	1 cut(s)	433
BsuRI	GGCC	2 cut(s)	21, 67
BtgZI	GCGATG	1 cut(s)	642
BtsCI	GGATG	1 cut(s)	394
BtsI	GCAGTG	1 cut(s)	707
BtsIMutI	CAGTG	2 cut(s)	18, 707
CseI	GACGC	2 cut(s)	15, 167
Csp6I	GTAC	2 cut(s)	16, 404
CviAII	CATG	1 cut(s)	692
CviQI	GTAC	2 cut(s)	16, 404
DdeI	CTNAG	6 cut(s)	237, 327, 421, 433, 662, 793
DpnI	GATC	2 cut(s)	690, 758
DpnII	GATC	2 cut(s)	688, 756
EaeI	YGGCCR	1 cut(s)	19
Eam1104I	CTCTTC	2 cut(s)	141, 578
EarI	CTCTTC	2 cut(s)	141, 578
EciI	GGCGGA	1 cut(s)	130
Eco147I	AGGCCT	1 cut(s)	67
Eco57I	CTGAAG	2 cut(s)	528, 723
Eco81I	CCTNAGG	1 cut(s)	433
EcoT22I	ATGCAT	1 cut(s)	45
FaeI	CATG	1 cut(s)	695
FatI	CATG	1 cut(s)	691
Fnu4HI	GCNGC	4 cut(s)	32, 162, 642, 720
FokI	GGATG	1 cut(s)	401
Fsp4HI	GCNGC	4 cut(s)	32, 162, 642, 720
FspBI	CTAG	1 cut(s)	603
GluI	GCNGC	4 cut(s)	32, 162, 642, 720
HaeIII	GGCC	2 cut(s)	21, 67
HapII	CCGG	2 cut(s)	227, 563
HgaI	GACGC	2 cut(s)	15, 167
Hin1II	CATG	1 cut(s)	695
HincII	GTYRAC	1 cut(s)	787
HindII	GTYRAC	1 cut(s)	787
HinfI	GANTC	5 cut(s)	188, 223, 239, 412, 463
HpaI	GTTAAC	1 cut(s)	787
HpaII	CCGG	2 cut(s)	227, 563
HphI	GGTGA	2 cut(s)	193, 740
Hpy166II	GTNNAC	3 cut(s)	16, 105, 787
Hpy188I	TCNGA	1 cut(s)	417
Hpy188III	TCNNGA	2 cut(s)	227, 435
Hpy8I	GTNNAC	3 cut(s)	16, 105, 787
Hpy99I	CGWCG	3 cut(s)	31, 114, 148
HpyAV	CCTTC	1 cut(s)	166
HpyCH4III	ACNGT	1 cut(s)	13
HpyCH4IV	ACGT	1 cut(s)	382
HpyCH4V	TGCA	4 cut(s)	43, 392, 615, 641
HpyF10VI	GCNNNNNNNGC	3 cut(s)	40, 158, 667
HpyF3I	CTNAG	6 cut(s)	237, 327, 421, 433, 662, 793
HpySE526I	ACGT	1 cut(s)	382
Hsp92II	CATG	1 cut(s)	695
Kpn2I	TCCGGA	1 cut(s)	226
KspAI	GTTAAC	1 cut(s)	787
Kzo9I	GATC	2 cut(s)	688, 756
LguI	GCTCTTC	1 cut(s)	141
LmnI	GCTCC	1 cut(s)	103
Lsp1109I	GCAGC	2 cut(s)	18, 653
LweI	GCATC	3 cut(s)	30, 379, 581
MaeI	CTAG	1 cut(s)	603
MaeII	ACGT	1 cut(s)	382
MalI	GATC	2 cut(s)	690, 758
MboI	GATC	2 cut(s)	688, 756
MboII	GAAGA	5 cut(s)	128, 227, 306, 309, 595
MfeI	CAATTG	2 cut(s)	399, 407
MhlI	GDGCHC	1 cut(s)	136
MluCI	AATT	5 cut(s)	296, 399, 407, 749, 770
MlyI	GAGTC	2 cut(s)	217, 248
MmeI	TCCRAC	1 cut(s)	165
MnlI	CCTC	7 cut(s)	214, 354, 442, 497, 579, 672, 805
Mph1103I	ATGCAT	1 cut(s)	45
MroI	TCCGGA	1 cut(s)	226
MseI	TTAA	5 cut(s)	167, 675, 738, 786, 816
MslI	CAYNNNNRTG	1 cut(s)	577
MspA1I	CMGCKG	1 cut(s)	644
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	2 cut(s)	227, 563
MunI	CAATTG	2 cut(s)	399, 407
Mva1269I	GAATGC	1 cut(s)	238
MvnI	CGCG	1 cut(s)	161
MwoI	GCNNNNNNNGC	3 cut(s)	40, 158, 667
NdeII	GATC	2 cut(s)	688, 756
NlaIII	CATG	1 cut(s)	695
NsiI	ATGCAT	1 cut(s)	45
PceI	AGGCCT	1 cut(s)	67
PciSI	GCTCTTC	1 cut(s)	141
PctI	GAATGC	1 cut(s)	238
PfeI	GAWTC	3 cut(s)	188, 412, 463
PflMI	CCANNNNNTGG	1 cut(s)	808
PkrI	GCNGC	4 cut(s)	33, 163, 643, 721
PleI	GAGTC	2 cut(s)	217, 247
PpsI	GAGTC	2 cut(s)	217, 247
Psp1406I	AACGTT	1 cut(s)	382
RsaI	GTAC	2 cut(s)	17, 405
RsaNI	GTAC	2 cut(s)	16, 404
RseI	CAYNNNNRTG	1 cut(s)	577
SapI	GCTCTTC	1 cut(s)	141
SaqAI	TTAA	5 cut(s)	167, 675, 738, 786, 816
SatI	GCNGC	4 cut(s)	32, 162, 642, 720
Sau3AI	GATC	2 cut(s)	688, 756
SchI	GAGTC	2 cut(s)	217, 248
SduI	GDGCHC	1 cut(s)	136
SfaNI	GCATC	3 cut(s)	30, 379, 581
SmiMI	CAYNNNNRTG	1 cut(s)	577
SmlI	CTYRAG	2 cut(s)	674, 780
SmoI	CTYRAG	2 cut(s)	674, 780
Sse9I	AATT	5 cut(s)	296, 399, 407, 749, 770
SseBI	AGGCCT	1 cut(s)	67
SsiI	CCGC	5 cut(s)	115, 161, 570, 644, 719
SspMI	CTAG	1 cut(s)	603
StuI	AGGCCT	1 cut(s)	67
TaaI	ACNGT	1 cut(s)	13
TaiI	ACGT	1 cut(s)	385
TaqI	TCGA	2 cut(s)	461, 697
TasI	AATT	5 cut(s)	296, 399, 407, 749, 770
TatI	WGTACW	1 cut(s)	403
TauI	GCSGC	2 cut(s)	164, 722
TfiI	GAWTC	3 cut(s)	188, 412, 463
Tru1I	TTAA	5 cut(s)	167, 675, 738, 786, 816
Tru9I	TTAA	5 cut(s)	167, 675, 738, 786, 816
TscAI	CASTG	2 cut(s)	18, 714
TseI	GCWGC	2 cut(s)	31, 641
TspDTI	ATGAA	1 cut(s)	185
TspGWI	ACGGA	2 cut(s)	90, 456
TspRI	CASTG	2 cut(s)	18, 714
Van91I	CCANNNNNTGG	1 cut(s)	808
Vha464I	CTTAAG	1 cut(s)	674
XapI	RAATTY	1 cut(s)	296
XspI	CTAG	1 cut(s)	603
Zsp2I	ATGCAT	1 cut(s)	45

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.