Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001921

Physical Location & Seq

Genomic Coordinates Reverse (-)

11921350 .. 11924748

Gene Structure 3399 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G27990.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGATATGATAAAACCAGATTTTCAACAAATCCGAAGAGATAAGTTTAGAGTTGAGCAAATGAATGATTTTCCCAACACTTGGACTCAGCAGCAGCATCAGAACATCAGAATTCCCAACAACCTTGATTTGATTGGTATCTTACAGAACCAGATTTCCGTACCGGTTCAAACCGATTTGTATCAAGATTCTGCCGCAACCTTTATGAACATGCCTCAGTCGATACATAGAGACCCACAAGGCCCTAGTAATTGGAGAATCAGTGATTTGTCACAACCTAGTACCGTGAATCACGGATATGATCAGGCTGGTATTAGGCCAAACAACGTTGCAGATTTGTTGTCCGATCATTTCAGTTCTCGAAACCAAATATTGGACCGTCCTCTTTATGTCGGCCGGGACTCTATTCCTCAGTCTAGCATGATTAGGAGAAGTGAAGTTTCTTGTCTAGACGATAATCAAAAGGGTTGTGTAACGGTGGCTTGTTCGGGTACTGGTAATGAGATTTTAAGGAGCAGTTATGATCAAGGTTCTTCTTCTGGAAGTTACCGAGGAGAATTTTCGTTTCTCCCAAGTTTGGAGAATCAATCAGTTGCGCACAATGCAAGCAACTGGAACCACGGACCAGTGAATGTTACTGCCACTTCTCATACTAATAGTAAGAAAGGCTTTCCACTCTCACTTTTGTCTGATATCCCTCCATCTAGAGACGTTGGAAATGCAGCTGTTTTGTCAACAATGAATATTCACGGCCCACTCGGGCCTTTCACGGGATATGCATCGATACTGAAGAGTTCGAGGTTCTTGGAGCCGGCTCAGAAAATGTTAGAAGAGTTTTGTATCTCTTATGCTTCAAAGATTATTAGTAGAAGTGAATCTACTTCCATGGAGGATGATGATGATGATGATGATAACTTGTCAGGGTTTAGTAGTTCTTCTGAGCCATTAGAACCCAAGAATAGACTAAAGAAAGCAAAACTTCTCTTTCTGCAAGAAGAGGTTTGCAAGTGGTACAAACTATATAATCATCAGTTGCAAACAGTTATGTCTTCCTTCAATACAGTGGCTGGTCTAAACACCGCAACACCGTATATCTCGTTGGCTCTCAAACGGACTTCACGAAGTTTCAAGGCCCTTAGAACCGCAATAGCTGAACATGTGAAGCAAATCTCAAGTCACTCATCAAACGGTAACAACAACAACCGATTCCAAAAGAGGCAAAGATCTTTGATTGGTAACAATGTCGGGTTTGAATCTCAACAACAACATATCTGGAGGCCTCAAAGGGGATTGCCCGAACGTGCAGTGGCTGTTCTTAGAGCATGGCTCTTTGACCATTTTCTTCATCCGTACCCCACTGATTCTGATAAGCAGATGCTAGCCACTCAAACTGGTCTCTCTCGTAACCAGGTATCAAATTGGTTCATAAACGCCCGTGTGCGATTATGGAAACCTATGGTGGAAGAAATACACACACTTGAGACCAAAGCAATTAAAAATGCAGATACTAGTCACAACATTGAGCCATCAAATAGACCGAATACTGTTAGCAGTCCGAGCCATGAACAAACGCTAACGGGCCTCTCCGGGACAAAACGGTCGAGGTTAGAGTACATGGACATGGTGGGGTTCAATAGAGGGAACGTGTCACTCACGTTAGAGCTTAGGCGTGGTGTGGACAATGTTATCCAAACGCAGACTCAGGATCATCAGTTTGGAACTGGAAGCCAAATGTTTCATGACTTTGTGGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0010016 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010223 GO:0010228 GO:0010229 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048367 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080006 GO:0080090 GO:0090567 GO:0098727 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

584

Amino Acids

65.77

Weight (kDa)

8.18

Isoelectric Point (pI)

53.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POX	PF07526	262 - 384	4.4e-28	Associated with HOX

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001921)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27990 AT2G27990
fragaria_vesca	FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640
malus_domestica	MD03G1122400.v1.1 MD11G1140600.v1.1
prunus_persica	Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1
pyrus_communis	pycom11g11630
rosa_chinensis	RchiOBHm_Chr5g0058351
rosa_laevigata	RLG00000035214
rosa_roxburghii	Rroxscaffold_1G00022230
rosa_rugosa	Rorug05G0313100 Rorug05G0313200 Rorug05G0313300
rosa_samantha	Rh5AG380800 Rh5BG392300 Rh5CG416300 Rh5DG407200
rosa_wichuraiana	Rw5G035880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1597
Acc16I	TGCGCA	1 cut(s)	597
AccB7I	CCANNNNNTGG	2 cut(s)	81, 373
AciI	CCGC	3 cut(s)	195, 1080, 1143
AclI	AACGTT	1 cut(s)	327
AclWI	GGATC	1 cut(s)	1713
AcoI	YGGCCR	1 cut(s)	394
AcsI	RAATTY	2 cut(s)	111, 557
AcuI	CTGAAG	1 cut(s)	809
AfaI	GTAC	6 cut(s)	162, 283, 493, 1013, 1352, 1613
AfiI	CCNNNNNNNGG	5 cut(s)	81, 373, 577, 770, 1286
AflIII	ACRYGT	2 cut(s)	1156, 1644
AgeI	ACCGGT	1 cut(s)	163
AgsI	TTSAA	7 cut(s)	26, 170, 855, 1057, 1129, 1253, 1633
AhlI	ACTAGT	1 cut(s)	1508
AjnI	CCWGG	1 cut(s)	1407
AloI	GAACNNNNNNTCC	2 cut(s)	140, 172
AluBI	AGCT	3 cut(s)	725, 1151, 1663
AluI	AGCT	3 cut(s)	725, 1151, 1663
Alw26I	GTCTC	4 cut(s)	225, 702, 1400, 1475
AlwI	GGATC	1 cut(s)	1713
AlwNI	CAGNNNCTG	2 cut(s)	1067, 1310
Ama87I	CYCGRG	1 cut(s)	758
AoxI	GGCC	8 cut(s)	241, 317, 394, 751, 761, 1131, 1277, 1579
ApeKI	GCWGC	3 cut(s)	91, 94, 722
ApoI	RAATTY	2 cut(s)	111, 557
ArsI	GACNNNNNNTTYG	2 cut(s)	1159, 1191
AsiGI	ACCGGT	1 cut(s)	163
AspLEI	GCGC	1 cut(s)	598
AspS9I	GGNCC	7 cut(s)	242, 376, 623, 752, 761, 1132, 1579
AsuC2I	CCSGG	2 cut(s)	398, 1588
AsuNHI	GCTAGC	1 cut(s)	1378
AvaI	CYCGRG	1 cut(s)	758
AvaII	GGWCC	2 cut(s)	376, 623
BarI	GAAGNNNNNNTAC	2 cut(s)	862, 894
BbsI	GAAGAC	1 cut(s)	1041
BbvI	GCAGC	3 cut(s)	103, 106, 734
BccI	CCATC	2 cut(s)	709, 1534
BceAI	ACGGC	1 cut(s)	766
BciT130I	CCWGG	1 cut(s)	1409
BclI	TGATCA	2 cut(s)	301, 523
BcnI	CCSGG	2 cut(s)	398, 1588
BcoDI	GTCTC	4 cut(s)	225, 702, 1400, 1475
BcuI	ACTAGT	1 cut(s)	1508
BfaI	CTAG	7 cut(s)	246, 279, 417, 449, 705, 1379, 1509
BglII	AGATCT	1 cut(s)	1223
BisI	GCNGC	4 cut(s)	92, 95, 195, 723
BlsI	GCNGC	4 cut(s)	93, 96, 196, 724
Bme1390I	CCNGG	3 cut(s)	398, 1409, 1588
Bme18I	GGWCC	2 cut(s)	376, 623
BmeT110I	CYCGRG	1 cut(s)	758
BmgT120I	GGNCC	7 cut(s)	242, 376, 623, 752, 761, 1132, 1579
BmiI	GGNNCC	2 cut(s)	617, 810
BmrFI	CCNGG	3 cut(s)	398, 1409, 1588
BmsI	GCATC	3 cut(s)	106, 788, 1365
BmtI	GCTAGC	1 cut(s)	1382
BpiI	GAAGAC	1 cut(s)	1041
BplI	GAGNNNNNCTC	2 cut(s)	1311, 1343
BpmI	CTGGAG	1 cut(s)	1294
Bpu10I	CCTNAGC	1 cut(s)	1664
BpuEI	CTTGAG	2 cut(s)	1156, 1499
BpuMI	CCSGG	2 cut(s)	398, 1588
Bsa29I	ATCGAT	1 cut(s)	782
BsaBI	GATNNNNATC	3 cut(s)	137, 180, 778
BsaI	GGTCTC	3 cut(s)	225, 1400, 1475
BsaJI	CCNNGG	3 cut(s)	550, 619, 885
BsaWI	WCCGGW	1 cut(s)	163
BsaXI	ACNNNNNCTCC	2 cut(s)	247, 277
Bsc4I	CCNNNNNNNGG	5 cut(s)	81, 373, 577, 770, 1286
Bse118I	RCCGGY	2 cut(s)	163, 811
Bse1I	ACTGG	5 cut(s)	499, 617, 626, 1396, 1726
Bse8I	GATNNNNATC	3 cut(s)	137, 180, 778
BseBI	CCWGG	1 cut(s)	1409
BseCI	ATCGAT	1 cut(s)	782
BseDI	CCNNGG	3 cut(s)	550, 619, 885
BseGI	GGATG	2 cut(s)	898, 1345
BseJI	GATNNNNATC	3 cut(s)	137, 180, 778
BseLI	CCNNNNNNNGG	5 cut(s)	81, 373, 577, 770, 1286
BseMII	CTCAG	6 cut(s)	101, 230, 425, 830, 930, 1715
BseNI	ACTGG	5 cut(s)	499, 617, 626, 1396, 1726
BseRI	GAGGAG	1 cut(s)	567
BseX3I	CGGCCG	1 cut(s)	394
BseXI	GCAGC	3 cut(s)	103, 106, 734
BsgI	GTGCAG	1 cut(s)	1323
Bsh1285I	CGRYCG	2 cut(s)	397, 1601
BshFI	GGCC	8 cut(s)	243, 319, 396, 753, 763, 1133, 1279, 1581
BshTI	ACCGGT	1 cut(s)	163
BshVI	ATCGAT	1 cut(s)	782
BsiEI	CGRYCG	2 cut(s)	397, 1601
BsiHKCI	CYCGRG	1 cut(s)	758
BsiSI	CCGG	4 cut(s)	164, 397, 812, 1587
BslFI	GGGAC	2 cut(s)	413, 1603
BslI	CCNNNNNNNGG	5 cut(s)	81, 373, 577, 770, 1286
BsmAI	GTCTC	4 cut(s)	225, 702, 1400, 1475
BsmBI	CGTCTC	1 cut(s)	702
BsmFI	GGGAC	2 cut(s)	413, 1603
BsnI	GGCC	8 cut(s)	243, 319, 396, 753, 763, 1133, 1279, 1581
Bso31I	GGTCTC	3 cut(s)	225, 1400, 1475
BsoBI	CYCGRG	1 cut(s)	758
Bsp143I	GATC	5 cut(s)	301, 346, 523, 1223, 1705
Bsp19I	CCATGG	1 cut(s)	885
BspACI	CCGC	3 cut(s)	195, 1080, 1143
BspANI	GGCC	8 cut(s)	243, 319, 396, 753, 763, 1133, 1279, 1581
BspCNI	CTCAG	6 cut(s)	100, 229, 424, 829, 931, 1714
BspDI	ATCGAT	1 cut(s)	782
BspHI	TCATGA	1 cut(s)	1738
BspLI	GGNNCC	2 cut(s)	617, 810
BspOI	GCTAGC	1 cut(s)	1382
BspPI	GGATC	1 cut(s)	1713
BspTNI	GGTCTC	3 cut(s)	225, 1400, 1475
BsrFI	RCCGGY	2 cut(s)	163, 811
BsrI	ACTGG	5 cut(s)	499, 617, 626, 1396, 1726
BssAI	RCCGGY	2 cut(s)	163, 811
BssECI	CCNNGG	3 cut(s)	550, 619, 885
BssMI	GATC	5 cut(s)	301, 346, 523, 1223, 1705
BssT1I	CCWWGG	1 cut(s)	885
Bst2UI	CCWGG	1 cut(s)	1409
Bst4CI	ACNGT	9 cut(s)	286, 380, 478, 1042, 1063, 1089, 1190, 1546, 1599
Bst6I	CTCTTC	4 cut(s)	31, 785, 825, 990
BstC8I	GCNNGC	3 cut(s)	607, 813, 1380
BstDEI	CTNAG	9 cut(s)	87, 216, 411, 816, 939, 1136, 1316, 1664, 1701
BstDSI	CCRYGG	2 cut(s)	619, 885
BstF5I	GGATG	2 cut(s)	898, 1345
BstHHI	GCGC	1 cut(s)	598
BstKTI	GATC	5 cut(s)	304, 349, 526, 1226, 1708
BstMAI	GTCTC	4 cut(s)	225, 702, 1400, 1475
BstMBI	GATC	5 cut(s)	301, 346, 523, 1223, 1705
BstMCI	CGRYCG	2 cut(s)	397, 1601
BstMWI	GCNNNNNNNGC	2 cut(s)	602, 1557
BstNI	CCWGG	1 cut(s)	1409
BstNSI	RCATGY	2 cut(s)	214, 1160
BstSCI	CCNGG	3 cut(s)	396, 1407, 1586
BstV1I	GCAGC	3 cut(s)	103, 106, 734
BstV2I	GAAGAC	1 cut(s)	1041
BstX2I	RGATCY	1 cut(s)	1223
BstYI	RGATCY	1 cut(s)	1223
BstZI	CGGCCG	1 cut(s)	394
Bsu15I	ATCGAT	1 cut(s)	782
BsuRI	GGCC	8 cut(s)	243, 319, 396, 753, 763, 1133, 1279, 1581
BsuTUI	ATCGAT	1 cut(s)	782
BtgI	CCRYGG	2 cut(s)	619, 885
BtsCI	GGATG	2 cut(s)	898, 1345
BtsI	GCAGTG	1 cut(s)	1311
BtsIMutI	CAGTG	5 cut(s)	268, 633, 1068, 1311, 1356
Cac8I	GCNNGC	3 cut(s)	607, 813, 1380
CaiI	CAGNNNCTG	2 cut(s)	1067, 1310
CciI	TCATGA	1 cut(s)	1738
CfoI	GCGC	1 cut(s)	598
Cfr10I	RCCGGY	2 cut(s)	163, 811
Cfr13I	GGNCC	7 cut(s)	242, 376, 623, 752, 761, 1132, 1579
ClaI	ATCGAT	1 cut(s)	782
CsiI	ACCWGGT	1 cut(s)	1407
Csp6I	GTAC	6 cut(s)	161, 282, 492, 1012, 1351, 1612
CspAI	ACCGGT	1 cut(s)	163
CviAII	CATG	9 cut(s)	211, 421, 886, 1157, 1323, 1562, 1615, 1621, 1739
CviQI	GTAC	6 cut(s)	161, 282, 492, 1012, 1351, 1612
DdeI	CTNAG	9 cut(s)	87, 216, 411, 816, 939, 1136, 1316, 1664, 1701
DpnI	GATC	5 cut(s)	303, 348, 525, 1225, 1707
DpnII	GATC	5 cut(s)	301, 346, 523, 1223, 1705
DrdI	GACNNNNNNGTC	1 cut(s)	1597
DseDI	GACNNNNNNGTC	1 cut(s)	1597
EaeI	YGGCCR	1 cut(s)	394
EagI	CGGCCG	1 cut(s)	394
Eam1104I	CTCTTC	4 cut(s)	31, 785, 825, 990
EarI	CTCTTC	4 cut(s)	31, 785, 825, 990
EclXI	CGGCCG	1 cut(s)	394
Eco130I	CCWWGG	1 cut(s)	885
Eco147I	AGGCCT	1 cut(s)	1279
Eco31I	GGTCTC	3 cut(s)	225, 1400, 1475
Eco32I	GATATC	1 cut(s)	694
Eco47I	GGWCC	2 cut(s)	376, 623
Eco52I	CGGCCG	1 cut(s)	394
Eco57I	CTGAAG	1 cut(s)	809
Eco88I	CYCGRG	1 cut(s)	758
EcoO109I	RGGNCCY	2 cut(s)	242, 1132
EcoRI	GAATTC	1 cut(s)	111
EcoRII	CCWGG	1 cut(s)	1407
EcoRV	GATATC	1 cut(s)	694
EcoT14I	CCWWGG	1 cut(s)	885
EcoT22I	ATGCAT	1 cut(s)	781
ErhI	CCWWGG	1 cut(s)	885
Esp3I	CGTCTC	1 cut(s)	702
FaeI	CATG	9 cut(s)	214, 424, 889, 1160, 1326, 1565, 1618, 1624, 1742
FalI	AAGNNNNNCTT	4 cut(s)	653, 685, 963, 995
FaqI	GGGAC	2 cut(s)	413, 1603
FatI	CATG	9 cut(s)	210, 420, 885, 1156, 1322, 1561, 1614, 1620, 1738
FbaI	TGATCA	2 cut(s)	301, 523
Fnu4HI	GCNGC	4 cut(s)	92, 95, 195, 723
FokI	GGATG	2 cut(s)	905, 1332
Fsp4HI	GCNGC	4 cut(s)	92, 95, 195, 723
FspBI	CTAG	7 cut(s)	246, 279, 417, 449, 705, 1379, 1509
FspI	TGCGCA	1 cut(s)	597
GlaI	GCGC	1 cut(s)	597
GluI	GCNGC	4 cut(s)	92, 95, 195, 723
GsuI	CTGGAG	1 cut(s)	1294
HaeIII	GGCC	8 cut(s)	243, 319, 396, 753, 763, 1133, 1279, 1581
HapII	CCGG	4 cut(s)	164, 397, 812, 1587
HhaI	GCGC	1 cut(s)	598
Hin1II	CATG	9 cut(s)	214, 424, 889, 1160, 1326, 1565, 1618, 1624, 1742
Hin6I	GCGC	1 cut(s)	596
HinP1I	GCGC	1 cut(s)	596
HincII	GTYRAC	1 cut(s)	735
HindII	GTYRAC	1 cut(s)	735
HpaII	CCGG	4 cut(s)	164, 397, 812, 1587
Hpy166II	GTNNAC	2 cut(s)	735, 1678
Hpy188I	TCNGA	9 cut(s)	35, 102, 110, 346, 691, 819, 940, 1366, 1557
Hpy188III	TCNNGA	9 cut(s)	185, 360, 449, 540, 705, 1119, 1273, 1703, 1739
Hpy8I	GTNNAC	2 cut(s)	735, 1678
HpyAV	CCTTC	1 cut(s)	1063
HpyCH4III	ACNGT	9 cut(s)	286, 380, 478, 1042, 1063, 1089, 1190, 1546, 1599
HpyCH4IV	ACGT	5 cut(s)	327, 711, 1300, 1644, 1655
HpyCH4V	TGCA	9 cut(s)	332, 605, 722, 779, 991, 1005, 1036, 1304, 1502
HpyF10VI	GCNNNNNNNGC	2 cut(s)	602, 1557
HpyF3I	CTNAG	9 cut(s)	87, 216, 411, 816, 939, 1136, 1316, 1664, 1701
HpySE526I	ACGT	5 cut(s)	327, 711, 1300, 1644, 1655
Hsp92II	CATG	9 cut(s)	214, 424, 889, 1160, 1326, 1565, 1618, 1624, 1742
HspAI	GCGC	1 cut(s)	596
KroI	GCCGGC	1 cut(s)	811
KroNI	GCCGGC	1 cut(s)	813
Ksp22I	TGATCA	2 cut(s)	301, 523
Kzo9I	GATC	5 cut(s)	301, 346, 523, 1223, 1705
LmnI	GCTCC	2 cut(s)	513, 808
Lsp1109I	GCAGC	3 cut(s)	103, 106, 734
LweI	GCATC	3 cut(s)	106, 788, 1365
MabI	ACCWGGT	1 cut(s)	1407
MaeI	CTAG	7 cut(s)	246, 279, 417, 449, 705, 1379, 1509
MaeII	ACGT	5 cut(s)	327, 711, 1300, 1644, 1655
MalI	GATC	5 cut(s)	303, 348, 525, 1225, 1707
MboI	GATC	5 cut(s)	301, 346, 523, 1223, 1705
MflI	RGATCY	1 cut(s)	1223
MluCI	AATT	5 cut(s)	111, 250, 557, 1417, 1491
MlyI	GAGTC	3 cut(s)	79, 395, 1693
MmeI	TCCRAC	1 cut(s)	694
Mph1103I	ATGCAT	1 cut(s)	781
MroNI	GCCGGC	1 cut(s)	811
MseI	TTAA	2 cut(s)	509, 1494
MslI	CAYNNNNRTG	2 cut(s)	297, 1619
MspA1I	CMGCKG	1 cut(s)	725
MspI	CCGG	4 cut(s)	164, 397, 812, 1587
MspR9I	CCNGG	3 cut(s)	398, 1409, 1588
MvaI	CCWGG	1 cut(s)	1409
MwoI	GCNNNNNNNGC	2 cut(s)	602, 1557
NaeI	GCCGGC	1 cut(s)	813
NciI	CCSGG	2 cut(s)	398, 1588
NcoI	CCATGG	1 cut(s)	885
NdeII	GATC	5 cut(s)	301, 346, 523, 1223, 1705
NgoMIV	GCCGGC	1 cut(s)	811
NheI	GCTAGC	1 cut(s)	1378
NlaIII	CATG	9 cut(s)	214, 424, 889, 1160, 1326, 1565, 1618, 1624, 1742
NlaIV	GGNNCC	2 cut(s)	617, 810
NmuCI	GTSAC	4 cut(s)	270, 1175, 1511, 1647
NsbI	TGCGCA	1 cut(s)	597
NsiI	ATGCAT	1 cut(s)	781
NspI	RCATGY	2 cut(s)	214, 1160
PagI	TCATGA	1 cut(s)	1738
PceI	AGGCCT	1 cut(s)	1279
PciI	ACATGT	1 cut(s)	1156
PcsI	WCGNNNNNNNCGW	1 cut(s)	1117
PdiI	GCCGGC	1 cut(s)	813
PfeI	GAWTC	8 cut(s)	188, 258, 289, 583, 875, 1206, 1253, 1361
PflMI	CCANNNNNTGG	2 cut(s)	81, 373
PfoI	TCCNGGA	1 cut(s)	1586
PinAI	ACCGGT	1 cut(s)	163
PkrI	GCNGC	4 cut(s)	93, 96, 196, 724
PleI	GAGTC	3 cut(s)	79, 395, 1693
PpsI	GAGTC	3 cut(s)	79, 395, 1693
PscI	ACATGT	1 cut(s)	1156
Psp1406I	AACGTT	1 cut(s)	327
Psp6I	CCWGG	1 cut(s)	1407
PspGI	CCWGG	1 cut(s)	1407
PspN4I	GGNNCC	2 cut(s)	617, 810
PspPI	GGNCC	7 cut(s)	242, 376, 623, 752, 761, 1132, 1579
PstNI	CAGNNNCTG	2 cut(s)	1067, 1310
PsuI	RGATCY	1 cut(s)	1223
PvuII	CAGCTG	1 cut(s)	725
RsaI	GTAC	6 cut(s)	162, 283, 493, 1013, 1352, 1613
RsaNI	GTAC	6 cut(s)	161, 282, 492, 1012, 1351, 1612
RseI	CAYNNNNRTG	2 cut(s)	297, 1619
SaqAI	TTAA	2 cut(s)	509, 1494
SatI	GCNGC	4 cut(s)	92, 95, 195, 723
Sau3AI	GATC	5 cut(s)	301, 346, 523, 1223, 1705
Sau96I	GGNCC	7 cut(s)	242, 376, 623, 752, 761, 1132, 1579
SchI	GAGTC	3 cut(s)	79, 395, 1693
ScrFI	CCNGG	3 cut(s)	398, 1409, 1588
SexAI	ACCWGGT	1 cut(s)	1407
SfaNI	GCATC	3 cut(s)	106, 788, 1365
SinI	GGWCC	2 cut(s)	376, 623
SmiMI	CAYNNNNRTG	2 cut(s)	297, 1619
SmlI	CTYRAG	2 cut(s)	1171, 1478
SmoI	CTYRAG	2 cut(s)	1171, 1478
SpeI	ACTAGT	1 cut(s)	1508
Sse9I	AATT	5 cut(s)	111, 250, 557, 1417, 1491
SseBI	AGGCCT	1 cut(s)	1279
SsiI	CCGC	3 cut(s)	195, 1080, 1143
SspI	AATATT	2 cut(s)	372, 745
SspMI	CTAG	7 cut(s)	246, 279, 417, 449, 705, 1379, 1509
StuI	AGGCCT	1 cut(s)	1279
StyD4I	CCNGG	3 cut(s)	396, 1407, 1586
StyI	CCWWGG	1 cut(s)	885
TaaI	ACNGT	9 cut(s)	286, 380, 478, 1042, 1063, 1089, 1190, 1546, 1599
TaiI	ACGT	5 cut(s)	330, 714, 1303, 1647, 1658
TaqI	TCGA	5 cut(s)	221, 361, 782, 797, 1601
TaqII	GACCGA	1 cut(s)	1552
TasI	AATT	5 cut(s)	111, 250, 557, 1417, 1491
TatI	WGTACW	1 cut(s)	1611
TauI	GCSGC	1 cut(s)	197
TfiI	GAWTC	8 cut(s)	188, 258, 289, 583, 875, 1206, 1253, 1361
Tru1I	TTAA	2 cut(s)	509, 1494
Tru9I	TTAA	2 cut(s)	509, 1494
TscAI	CASTG	5 cut(s)	268, 633, 1068, 1311, 1363
TseFI	GTSAC	4 cut(s)	270, 1175, 1511, 1647
TseI	GCWGC	3 cut(s)	91, 94, 722
Tsp45I	GTSAC	4 cut(s)	270, 1175, 1511, 1647
TspDTI	ATGAA	7 cut(s)	77, 221, 755, 1334, 1414, 1578, 1727
TspGWI	ACGGA	5 cut(s)	148, 309, 636, 1126, 1338
TspRI	CASTG	5 cut(s)	268, 633, 1068, 1311, 1363
Van91I	CCANNNNNTGG	2 cut(s)	81, 373
VpaK11BI	GGWCC	2 cut(s)	376, 623
XapI	RAATTY	2 cut(s)	111, 557
XbaI	TCTAGA	2 cut(s)	448, 704
XceI	RCATGY	2 cut(s)	214, 1160
XspI	CTAG	7 cut(s)	246, 279, 417, 449, 705, 1379, 1509
Zsp2I	ATGCAT	1 cut(s)	781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.