Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001921

Physical Location & Seq

Genomic Coordinates Reverse (-)

7440410 .. 7448105

Gene Structure 7696 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G105100.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGGAGATGAGTGGCTTTAGGCCGGAATTACATGTAGCACAGCAAAGCAGGCGAGATAAGTTGAGAGTTCATCAAACTTCGAGCCCACCTCACCATTTAGATTCTGAAAAATTACCAATCCACCCGGGACTAAACCCAGATATTGTTCACGTTCGGAATGTGAGAAATGCCAATTTGCTCTATGATCCGACTGTGTTTTCCTCCGAGATGCTCAATTTTTCGATAAACACGAATGCGTTGTCGGGTCAAGGTTCTGGTGAGTCTGAGAATTTTGGTAACTGGAGGAGTCTTAATCCACCTCAAAGCTTAGATTGGGTGACAAATTACACAAGTGGTTCAGTGGGTAGTGGAAGTAATAATCAGAACCACATGTTTGGTAGTAGGGAATCAAACAATAACATGTCTCCATCCACACCACATTTATTAAAGCCTAGTAGTTTCCATGGGTATCAAGATGTGCAGTCTAGTTTGGCTAACCAGTCTGCTGAGATTTCTAGCCATCATGTTAGCCAAAAGCACTTGGGAACGATGCATTTTTCTTCTCCTCCACTAAATTACCTTAATACCCTCCAGGATGTTGTCACTTCAGCTTCTACAGGTGCCCAGGATCAGCTAGAAATGGCTTCACTTGTGCAGCAAAGAATCATGGAAAATGAACTTGTTCTTCTTCCAAGCTATGTGAATCAGTCGAACACATTACGCTTTGATAATGCTAGTAGTAATTCTTGGATGAATCGGCAGCCTGTTGAGAATCGCCATCACTGGAGTAGTGGTGGTGGTGGTGGAATGGGTTTTAGTACTGCTAAAAATGTTGATGAAGACATGAGGAATGGGATGAATAATGATTCCAATCAGCAAGGGCTTTCTCTCTCACTGTCATCAAATCCACCATCTAATAATAAACTGCCTGCGGCTCAATTTGGGTCTCAAGATTTACATGCAAGCTCTCATGATGATCATGCTTTTAAGGATGTTCAAAGTCCGAAAACCGGGAAATCTTCTGCGGATTACTTATGTTCCATTGCAAAGCCATCTATAATTAGCAAAGCTTGTGGAAAGTCTCTTCAAGACATTGTGGGGACTTCTACTAGCGCTTGTCGAAGCACCGGTCCTCTTGGTCCTTTCACTGGTTATGCAACTATTTTGAAGAGCTCCAAGTTCTTGAAACCAGCCCAACAGCTATTGGATGAATTCTGTAGAAATAGTGATTCAAAGCTAACCAAAACACGTGAGGCATCTGAGAGGATGTCTGGAGATGTCAGTGCTTCTGCTTCAGTTTCGGTTTCTACTGATGCTGCTAATGCAGTTGAAACTGAAGCAGTGACTAAGGGTAACAATTCTGGTGCTTCTTCTTCTACATTTTACGGTTCAAATGAAATTACCAGTGATGGTGGAGCTGCAAGCATATCTTCTGGGTCCTTTGGGCCTGAGTACCAACAAAAGAAAGCAAAGCTTCTTTATATGCAAGAGGAGGTTTGCAGAAGGTACAAGCAATATCATCAACAAATGCAAATGGTGGTCTCTTCCTTCGAGTCGGTTGCCGGTCTAAGTTCTGCCACACCTTACATATCCATGGCTCTCAATACAGTGTCAAGACACTTCAGGTGTCTCACGAATGCCATCAAAGACCAGCTCAAGCACATAAGGAAAGCTTTGGGAGAGGAATATTTGTCATCAGCTATAACTACTGGTACTACTGGGTGTAGTAGTAGTAAAGGGGATAAAAACTTAGCCAAGCTAAAGTTCATGGGCCTCGGCTTCCAAAAGCATAATAAATCTGGTGGTGGGGCCCATCTGGGTTTCTCTGAACCCCAACAACACGTCTGGAGGCCCCAGAGAGGCCTACCTGAACGTTCAGTGGCCATTCTTAGAGCTTGGCTCTTTGAGCATTTTCTTCATCCGTATCCCACGGACACAGATAAGCACATGTTAGCCACTCAAACGGGTCTATCTAGAAACCAGGTGTCCAACTGGTTCATAAACGCCAGAGTGCGTGTTTGGAAGCCCATGGTGGAAGAAATACACATGCTTGAGACTAGAGGAGGCTCTGTCGAAGCGAGCCAAGATCCCACGAAGAAGGATGGAAATTCTTTAACTGAAGGTACCAGCAGCAGACCAGACACCGAGCACCAGCTTGGCATAAATAATATGATGCATGATAGACAATTGGAATGCTCAGGAGATGAAGAACAGCAATATCAGGAGATCAAGAGGTCCAGAATTGAGTGTCAAGTTCCATCAAGCATGGACGGTGGACTGATGGGGTTTGTCCCGTACCAGCGAAGCGGGCTTGAGGTTGGGGGACTCGGCGCCGTGTCCCTTACATTGGGTCTAAGACATGGGGTGGAAAGTGCCCAACAACAGCAGCAACAACAATTGCAGCAACAGGAGGATCAGCTTCGGCGGCAACTTGGAAGTCAAATGATTCGTGATTTTGTGGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0010016 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010223 GO:0010228 GO:0010229 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048367 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080006 GO:0080090 GO:0090567 GO:0098727 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

815

Amino Acids

89.24

Weight (kDa)

7.03

Isoelectric Point (pI)

53.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001921)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27990 AT2G27990
fragaria_vesca	FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640 FvH4_3g31640
malus_domestica	MD03G1122400.v1.1 MD11G1140600.v1.1
prunus_persica	Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1 Prupe.6G105100_v2.0.a1
pyrus_communis	pycom11g11630
rosa_chinensis	RchiOBHm_Chr5g0058351
rosa_laevigata	RLG00000035214
rosa_roxburghii	Rroxscaffold_1G00022230
rosa_rugosa	Rorug05G0313100 Rorug05G0313200 Rorug05G0313300
rosa_samantha	Rh5AG380800 Rh5BG392300 Rh5CG416300 Rh5DG407200
rosa_wichuraiana	Rw5G035880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2102
AccB1I	GGYRCC	3 cut(s)	599, 2102, 2309
AciI	CCGC	4 cut(s)	911, 1004, 2286, 2404
AclI	AACGTT	1 cut(s)	1852
AclWI	GGATC	4 cut(s)	179, 615, 2060, 2400
AcoI	YGGCCR	1 cut(s)	1860
AcsI	RAATTY	3 cut(s)	268, 1190, 2086
AcuI	CTGAAG	5 cut(s)	570, 1257, 1335, 1585, 2118
AcvI	CACGTG	1 cut(s)	1229
AcyI	GRCGYC	1 cut(s)	2310
AfaI	GTAC	6 cut(s)	799, 1433, 1487, 1693, 2104, 2276
AfeI	AGCGCT	1 cut(s)	1093
AfiI	CCNNNNNNNGG	4 cut(s)	989, 1127, 1838, 2326
AflIII	ACRYGT	6 cut(s)	31, 369, 399, 1226, 1819, 1926
AgeI	ACCGGT	1 cut(s)	1106
AgsI	TTSAA	7 cut(s)	977, 1067, 1147, 1165, 1212, 1310, 1371
AjiI	CACGTC	1 cut(s)	1822
AjnI	CCWGG	3 cut(s)	570, 603, 1959
AjuI	GAANNNNNNNTTGG	2 cut(s)	1727, 1759
Alw21I	GWGCWC	2 cut(s)	1154, 2130
Alw26I	GTCTC	6 cut(s)	408, 930, 1065, 1525, 1613, 2027
AlwI	GGATC	4 cut(s)	179, 615, 2060, 2400
Ama87I	CYCGRG	1 cut(s)	124
Aor51HI	AGCGCT	1 cut(s)	1093
AoxI	GGCC	7 cut(s)	20, 1424, 1750, 1788, 1829, 1840, 1860
ApaI	GGGCCC	1 cut(s)	1792
ApeKI	GCWGC	7 cut(s)	634, 739, 1295, 1397, 2109, 2365, 2380
ApoI	RAATTY	3 cut(s)	268, 1190, 2086
ArsI	GACNNNNNNTTYG	4 cut(s)	224, 256, 1093, 1125
AsiGI	ACCGGT	1 cut(s)	1106
Asp700I	GAANNNNTTC	1 cut(s)	660
Asp718I	GGTACC	1 cut(s)	2102
AspLEI	GCGC	2 cut(s)	1094, 2312
AspS9I	GGNCC	9 cut(s)	1109, 1118, 1416, 1424, 1750, 1788, 1789, 1830, 2214
AsuC2I	CCSGG	3 cut(s)	125, 126, 991
AsuHPI	GGTGA	3 cut(s)	83, 269, 328
AvaI	CYCGRG	1 cut(s)	124
AvaII	GGWCC	4 cut(s)	1109, 1118, 1416, 2214
BaeGI	GKGCMC	3 cut(s)	604, 1792, 2356
BalI	TGGCCA	1 cut(s)	1862
BanI	GGYRCC	3 cut(s)	599, 2102, 2309
BanII	GRGCYC	3 cut(s)	86, 1154, 1792
BbrPI	CACGTG	1 cut(s)	1229
BbsI	GAAGAC	1 cut(s)	825
Bbv12I	GWGCWC	2 cut(s)	1154, 2130
BbvI	GCAGC	7 cut(s)	646, 751, 1282, 1384, 2121, 2377, 2392
BceAI	ACGGC	1 cut(s)	2297
BcgI	CGANNNNNNTGC	2 cut(s)	1520, 1554
BciT130I	CCWGG	3 cut(s)	572, 605, 1961
BciVI	GTATCC	1 cut(s)	1914
BclI	TGATCA	1 cut(s)	955
BcnI	CCSGG	3 cut(s)	125, 126, 991
BcoDI	GTCTC	6 cut(s)	408, 930, 1065, 1525, 1613, 2027
BfaI	CTAG	8 cut(s)	432, 465, 495, 614, 714, 1089, 1953, 2037
BfmI	CTRYAG	2 cut(s)	594, 1195
BfoI	RGCGCY	2 cut(s)	1095, 2313
BfuI	GTATCC	1 cut(s)	1914
BisI	GCNGC	9 cut(s)	635, 740, 912, 1296, 1398, 2110, 2366, 2381, 2405
BlsI	GCNGC	9 cut(s)	636, 741, 913, 1297, 1399, 2111, 2367, 2382, 2406
BmcAI	AGTACT	1 cut(s)	799
Bme1390I	CCNGG	6 cut(s)	125, 126, 572, 605, 991, 1961
Bme18I	GGWCC	4 cut(s)	1109, 1118, 1416, 2214
BmeT110I	CYCGRG	1 cut(s)	124
BmgBI	CACGTC	1 cut(s)	1822
BmgT120I	GGNCC	9 cut(s)	1109, 1118, 1416, 1424, 1750, 1788, 1789, 1830, 2214
BmiI	GGNNCC	7 cut(s)	601, 1417, 1789, 1790, 1832, 2104, 2311
BmrFI	CCNGG	6 cut(s)	125, 126, 572, 605, 991, 1961
BmrI	ACTGGG	1 cut(s)	1707
BmsI	GCATC	5 cut(s)	198, 519, 1244, 1282, 2142
BmuI	ACTGGG	1 cut(s)	1707
BpiI	GAAGAC	1 cut(s)	825
BplI	GAGNNNNNCTC	4 cut(s)	73, 105, 1863, 1895
BpmI	CTGGAG	5 cut(s)	301, 554, 784, 1272, 1846
Bpu10I	CCTNAGC	1 cut(s)	2176
BpuEI	CTTGAG	4 cut(s)	912, 1619, 2051, 2312
BpuMI	CCSGG	3 cut(s)	125, 126, 991
BsaAI	YACGTR	1 cut(s)	1229
BsaBI	GATNNNNATC	1 cut(s)	849
BsaHI	GRCGYC	1 cut(s)	2310
BsaI	GGTCTC	2 cut(s)	930, 1525
BsaJI	CCNNGG	7 cut(s)	124, 442, 603, 1572, 1753, 1908, 2007
BsaWI	WCCGGW	1 cut(s)	1106
BsaXI	ACNNNNNCTCC	4 cut(s)	757, 787, 2034, 2064
Bsc4I	CCNNNNNNNGG	4 cut(s)	989, 1127, 1838, 2326
Bse118I	RCCGGY	2 cut(s)	1106, 1541
Bse1I	ACTGG	8 cut(s)	284, 478, 767, 1132, 1383, 1693, 1702, 1976
Bse3DI	GCAATG	1 cut(s)	1020
Bse8I	GATNNNNATC	1 cut(s)	849
BseBI	CCWGG	3 cut(s)	572, 605, 1961
BseDI	CCNNGG	7 cut(s)	124, 442, 603, 1572, 1753, 1908, 2007
BseGI	GGATG	9 cut(s)	407, 580, 735, 840, 976, 1192, 1251, 1897, 2086
BseJI	GATNNNNATC	1 cut(s)	849
BseLI	CCNNNNNNNGG	4 cut(s)	989, 1127, 1838, 2326
BseMI	GCAATG	1 cut(s)	1020
BseMII	CTCAG	5 cut(s)	255, 477, 1230, 1419, 2190
BseNI	ACTGG	8 cut(s)	284, 478, 767, 1132, 1383, 1693, 1702, 1976
BseRI	GAGGAG	4 cut(s)	298, 534, 1484, 2055
BseSI	GKGCMC	3 cut(s)	604, 1792, 2356
BseXI	GCAGC	7 cut(s)	646, 751, 1282, 1384, 2121, 2377, 2392
BsgI	GTGCAG	2 cut(s)	479, 653
BshFI	GGCC	7 cut(s)	22, 1426, 1752, 1790, 1831, 1842, 1862
BshNI	GGYRCC	3 cut(s)	599, 2102, 2309
BshTI	ACCGGT	1 cut(s)	1106
BsiHKAI	GWGCWC	2 cut(s)	1154, 2130
BsiHKCI	CYCGRG	1 cut(s)	124
BsiSI	CCGG	5 cut(s)	23, 125, 990, 1107, 1542
BslFI	GGGAC	5 cut(s)	141, 1093, 2255, 2302, 2316
BslI	CCNNNNNNNGG	4 cut(s)	989, 1127, 1838, 2326
BsmAI	GTCTC	6 cut(s)	408, 930, 1065, 1525, 1613, 2027
BsmFI	GGGAC	5 cut(s)	141, 1093, 2255, 2302, 2316
BsmI	GAATGC	3 cut(s)	238, 1621, 2177
BsnI	GGCC	7 cut(s)	22, 1426, 1752, 1790, 1831, 1842, 1862
Bso31I	GGTCTC	2 cut(s)	930, 1525
BsoBI	CYCGRG	1 cut(s)	124
Bsp120I	GGGCCC	1 cut(s)	1788
Bsp1286I	GDGCHC	6 cut(s)	86, 604, 1154, 1792, 2130, 2356
Bsp143I	GATC	6 cut(s)	184, 607, 955, 2065, 2205, 2392
Bsp19I	CCATGG	3 cut(s)	442, 1572, 2007
BspACI	CCGC	4 cut(s)	911, 1004, 2286, 2404
BspANI	GGCC	7 cut(s)	22, 1426, 1752, 1790, 1831, 1842, 1862
BspCNI	CTCAG	5 cut(s)	256, 478, 1231, 1420, 2189
BspHI	TCATGA	1 cut(s)	949
BspLI	GGNNCC	7 cut(s)	601, 1417, 1789, 1790, 1832, 2104, 2311
BspPI	GGATC	4 cut(s)	179, 615, 2060, 2400
BspQI	GCTCTTC	1 cut(s)	1142
BspT107I	GGYRCC	3 cut(s)	599, 2102, 2309
BspTNI	GGTCTC	2 cut(s)	930, 1525
BsrDI	GCAATG	1 cut(s)	1020
BsrFI	RCCGGY	2 cut(s)	1106, 1541
BsrI	ACTGG	8 cut(s)	284, 478, 767, 1132, 1383, 1693, 1702, 1976
BssAI	RCCGGY	2 cut(s)	1106, 1541
BssECI	CCNNGG	7 cut(s)	124, 442, 603, 1572, 1753, 1908, 2007
BssMI	GATC	6 cut(s)	184, 607, 955, 2065, 2205, 2392
BssNI	GRCGYC	1 cut(s)	2310
BssT1I	CCWWGG	3 cut(s)	442, 1572, 2007
Bst2UI	CCWGG	3 cut(s)	572, 605, 1961
Bst4CI	ACNGT	5 cut(s)	193, 876, 1367, 1588, 2252
Bst6I	CTCTTC	3 cut(s)	1068, 1142, 1528
BstACI	GRCGYC	1 cut(s)	2310
BstBAI	YACGTR	1 cut(s)	1229
BstC8I	GCNNGC	6 cut(s)	50, 909, 943, 1402, 2059, 2288
BstDSI	CCRYGG	4 cut(s)	442, 1572, 1908, 2007
BstF5I	GGATG	9 cut(s)	407, 580, 735, 840, 976, 1192, 1251, 1897, 2086
BstH2I	RGCGCY	2 cut(s)	1095, 2313
BstHHI	GCGC	2 cut(s)	1094, 2312
BstKTI	GATC	6 cut(s)	187, 610, 958, 2068, 2208, 2395
BstMAI	GTCTC	6 cut(s)	408, 930, 1065, 1525, 1613, 2027
BstMBI	GATC	6 cut(s)	184, 607, 955, 2065, 2205, 2392
BstMWI	GCNNNNNNNGC	5 cut(s)	49, 1301, 1885, 2287, 2404
BstNI	CCWGG	3 cut(s)	572, 605, 1961
BstNSI	RCATGY	6 cut(s)	35, 373, 403, 941, 1930, 2029
BstSCI	CCNGG	6 cut(s)	123, 124, 570, 603, 989, 1959
BstSFI	CTRYAG	2 cut(s)	594, 1195
BstSLI	GKGCMC	3 cut(s)	604, 1792, 2356
BstV1I	GCAGC	7 cut(s)	646, 751, 1282, 1384, 2121, 2377, 2392
BstV2I	GAAGAC	1 cut(s)	825
BstX2I	RGATCY	1 cut(s)	2065
BstXI	CCANNNNNNTGG	1 cut(s)	374
BstYI	RGATCY	1 cut(s)	2065
BsuI	GTATCC	1 cut(s)	1914
BsuRI	GGCC	7 cut(s)	22, 1426, 1752, 1790, 1831, 1842, 1862
BtgI	CCRYGG	4 cut(s)	442, 1572, 1908, 2007
BtrI	CACGTC	1 cut(s)	1822
BtsCI	GGATG	9 cut(s)	407, 580, 735, 840, 976, 1192, 1251, 1897, 2086
BtsI	GCAGTG	1 cut(s)	1326
BtsIMutI	CAGTG	9 cut(s)	345, 760, 872, 1125, 1267, 1326, 1390, 1593, 1863
Cac8I	GCNNGC	6 cut(s)	50, 909, 943, 1402, 2059, 2288
CciI	TCATGA	1 cut(s)	949
CfoI	GCGC	2 cut(s)	1094, 2312
Cfr10I	RCCGGY	2 cut(s)	1106, 1541
Cfr13I	GGNCC	9 cut(s)	1109, 1118, 1416, 1424, 1750, 1788, 1789, 1830, 2214
Cfr9I	CCCGGG	1 cut(s)	124
CsiI	ACCWGGT	1 cut(s)	1959
Csp6I	GTAC	6 cut(s)	798, 1432, 1486, 1692, 2103, 2275
CspAI	ACCGGT	1 cut(s)	1106
CspCI	CAANNNNNGTGG	2 cut(s)	1033, 1068
CviQI	GTAC	6 cut(s)	798, 1432, 1486, 1692, 2103, 2275
DinI	GGCGCC	1 cut(s)	2311
DpnI	GATC	6 cut(s)	186, 609, 957, 2067, 2207, 2394
DpnII	GATC	6 cut(s)	184, 607, 955, 2065, 2205, 2392
EaeI	YGGCCR	1 cut(s)	1860
Eam1104I	CTCTTC	3 cut(s)	1068, 1142, 1528
EarI	CTCTTC	3 cut(s)	1068, 1142, 1528
Ecl136II	GAGCTC	1 cut(s)	1152
Eco130I	CCWWGG	3 cut(s)	442, 1572, 2007
Eco147I	AGGCCT	1 cut(s)	1842
Eco24I	GRGCYC	3 cut(s)	86, 1154, 1792
Eco31I	GGTCTC	2 cut(s)	930, 1525
Eco47I	GGWCC	4 cut(s)	1109, 1118, 1416, 2214
Eco47III	AGCGCT	1 cut(s)	1093
Eco53kI	GAGCTC	1 cut(s)	1152
Eco57I	CTGAAG	5 cut(s)	570, 1257, 1335, 1585, 2118
Eco72I	CACGTG	1 cut(s)	1229
Eco88I	CYCGRG	1 cut(s)	124
EcoICRI	GAGCTC	1 cut(s)	1152
EcoO109I	RGGNCCY	3 cut(s)	1416, 1788, 1830
EcoRI	GAATTC	1 cut(s)	1190
EcoRII	CCWGG	3 cut(s)	570, 603, 1959
EcoT14I	CCWWGG	3 cut(s)	442, 1572, 2007
EcoT22I	ATGCAT	2 cut(s)	534, 2157
EcoT38I	GRGCYC	3 cut(s)	86, 1154, 1792
EgeI	GGCGCC	1 cut(s)	2311
EheI	GGCGCC	1 cut(s)	2311
ErhI	CCWWGG	3 cut(s)	442, 1572, 2007
FalI	AAGNNNNNCTT	6 cut(s)	1393, 1425, 1437, 1469, 1636, 1668
FaqI	GGGAC	5 cut(s)	141, 1093, 2255, 2302, 2316
FauI	CCCGC	1 cut(s)	2279
FbaI	TGATCA	1 cut(s)	955
Fnu4HI	GCNGC	9 cut(s)	635, 740, 912, 1296, 1398, 2110, 2366, 2381, 2405
FokI	GGATG	9 cut(s)	394, 587, 742, 847, 983, 1199, 1258, 1884, 2093
FriOI	GRGCYC	3 cut(s)	86, 1154, 1792
Fsp4HI	GCNGC	9 cut(s)	635, 740, 912, 1296, 1398, 2110, 2366, 2381, 2405
FspBI	CTAG	8 cut(s)	432, 465, 495, 614, 714, 1089, 1953, 2037
GlaI	GCGC	2 cut(s)	1093, 2311
GluI	GCNGC	9 cut(s)	635, 740, 912, 1296, 1398, 2110, 2366, 2381, 2405
GsuI	CTGGAG	5 cut(s)	301, 554, 784, 1272, 1846
HaeII	RGCGCY	2 cut(s)	1095, 2313
HaeIII	GGCC	7 cut(s)	22, 1426, 1752, 1790, 1831, 1842, 1862
HapII	CCGG	5 cut(s)	23, 125, 990, 1107, 1542
HhaI	GCGC	2 cut(s)	1094, 2312
Hin1I	GRCGYC	1 cut(s)	2310
Hin6I	GCGC	2 cut(s)	1092, 2310
HinP1I	GCGC	2 cut(s)	1092, 2310
HindIII	AAGCTT	4 cut(s)	304, 1047, 1451, 1650
HpaII	CCGG	5 cut(s)	23, 125, 990, 1107, 1542
HphI	GGTGA	3 cut(s)	83, 269, 328
Hpy166II	GTNNAC	2 cut(s)	148, 2255
Hpy188I	TCNGA	9 cut(s)	106, 156, 189, 205, 265, 363, 984, 1240, 1807
Hpy8I	GTNNAC	2 cut(s)	148, 2255
HpyAV	CCTTC	4 cut(s)	1476, 1537, 2071, 2093
HpyCH4III	ACNGT	5 cut(s)	193, 876, 1367, 1588, 2252
HpyCH4IV	ACGT	4 cut(s)	150, 1228, 1821, 1852
HpyF10VI	GCNNNNNNNGC	5 cut(s)	49, 1301, 1885, 2287, 2404
HpySE526I	ACGT	4 cut(s)	150, 1228, 1821, 1852
Hsp92I	GRCGYC	1 cut(s)	2310
HspAI	GCGC	2 cut(s)	1092, 2310
KasI	GGCGCC	1 cut(s)	2309
KpnI	GGTACC	1 cut(s)	2106
Ksp22I	TGATCA	1 cut(s)	955
Kzo9I	GATC	6 cut(s)	184, 607, 955, 2065, 2205, 2392
LguI	GCTCTTC	1 cut(s)	1142
LmnI	GCTCC	2 cut(s)	1157, 1394
Lsp1109I	GCAGC	7 cut(s)	646, 751, 1282, 1384, 2121, 2377, 2392
LweI	GCATC	5 cut(s)	198, 519, 1244, 1282, 2142
MabI	ACCWGGT	1 cut(s)	1959
MaeI	CTAG	8 cut(s)	432, 465, 495, 614, 714, 1089, 1953, 2037
MaeII	ACGT	4 cut(s)	150, 1228, 1821, 1852
MaeIII	GTNAC	5 cut(s)	275, 316, 580, 1321, 1331
MalI	GATC	6 cut(s)	186, 609, 957, 2067, 2207, 2394
MboI	GATC	6 cut(s)	184, 607, 955, 2065, 2205, 2392
MfeI	CAATTG	2 cut(s)	2165, 2375
MflI	RGATCY	1 cut(s)	2065
MhlI	GDGCHC	6 cut(s)	86, 604, 1154, 1792, 2130, 2356
MlsI	TGGCCA	1 cut(s)	1862
MluNI	TGGCCA	1 cut(s)	1862
Mly113I	GGCGCC	1 cut(s)	2310
MlyI	GAGTC	4 cut(s)	269, 295, 1541, 2298
MmeI	TCCRAC	2 cut(s)	212, 1992
Mox20I	TGGCCA	1 cut(s)	1862
Mph1103I	ATGCAT	2 cut(s)	534, 2157
MroXI	GAANNNNTTC	1 cut(s)	660
MscI	TGGCCA	1 cut(s)	1862
MseI	TTAA	6 cut(s)	291, 425, 561, 966, 2093, 2443
MslI	CAYNNNNRTG	1 cut(s)	1571
Msp20I	TGGCCA	1 cut(s)	1862
MspI	CCGG	5 cut(s)	23, 125, 990, 1107, 1542
MspR9I	CCNGG	6 cut(s)	125, 126, 572, 605, 991, 1961
MunI	CAATTG	2 cut(s)	2165, 2375
Mva1269I	GAATGC	3 cut(s)	238, 1621, 2177
MvaI	CCWGG	3 cut(s)	572, 605, 1961
MwoI	GCNNNNNNNGC	5 cut(s)	49, 1301, 1885, 2287, 2404
NarI	GGCGCC	1 cut(s)	2310
NciI	CCSGG	3 cut(s)	125, 126, 991
NcoI	CCATGG	3 cut(s)	442, 1572, 2007
NdeII	GATC	6 cut(s)	184, 607, 955, 2065, 2205, 2392
NlaIV	GGNNCC	7 cut(s)	601, 1417, 1789, 1790, 1832, 2104, 2311
NmeAIII	GCCGAG	2 cut(s)	1734, 2286
NmuCI	GTSAC	3 cut(s)	316, 580, 1321
NsiI	ATGCAT	2 cut(s)	534, 2157
NspI	RCATGY	6 cut(s)	35, 373, 403, 941, 1930, 2029
PagI	TCATGA	1 cut(s)	949
PceI	AGGCCT	1 cut(s)	1842
PciI	ACATGT	4 cut(s)	31, 369, 399, 1926
PciSI	GCTCTTC	1 cut(s)	1142
PcsI	WCGNNNNNNNCGW	1 cut(s)	227
PctI	GAATGC	3 cut(s)	238, 1621, 2177
PdmI	GAANNNNTTC	1 cut(s)	660
PfeI	GAWTC	9 cut(s)	101, 386, 642, 682, 733, 751, 845, 1208, 2425
PfoI	TCCNGGA	1 cut(s)	570
PinAI	ACCGGT	1 cut(s)	1106
PkrI	GCNGC	9 cut(s)	636, 741, 913, 1297, 1399, 2111, 2367, 2382, 2406
PleI	GAGTC	4 cut(s)	268, 294, 1540, 2298
PluTI	GGCGCC	1 cut(s)	2313
PmaCI	CACGTG	1 cut(s)	1229
PmlI	CACGTG	1 cut(s)	1229
PpsI	GAGTC	4 cut(s)	268, 294, 1540, 2298
Ppu21I	YACGTR	1 cut(s)	1229
PpuMI	RGGWCCY	1 cut(s)	1416
PscI	ACATGT	4 cut(s)	31, 369, 399, 1926
Psp124BI	GAGCTC	1 cut(s)	1154
Psp1406I	AACGTT	1 cut(s)	1852
Psp5II	RGGWCCY	1 cut(s)	1416
Psp6I	CCWGG	3 cut(s)	570, 603, 1959
PspCI	CACGTG	1 cut(s)	1229
PspGI	CCWGG	3 cut(s)	570, 603, 1959
PspN4I	GGNNCC	7 cut(s)	601, 1417, 1789, 1790, 1832, 2104, 2311
PspOMI	GGGCCC	1 cut(s)	1788
PspPI	GGNCC	9 cut(s)	1109, 1118, 1416, 1424, 1750, 1788, 1789, 1830, 2214
PspPPI	RGGWCCY	1 cut(s)	1416
PsuI	RGATCY	1 cut(s)	2065
RsaI	GTAC	6 cut(s)	799, 1433, 1487, 1693, 2104, 2276
RsaNI	GTAC	6 cut(s)	798, 1432, 1486, 1692, 2103, 2275
RseI	CAYNNNNRTG	1 cut(s)	1571
SacI	GAGCTC	1 cut(s)	1154
SapI	GCTCTTC	1 cut(s)	1142
SaqAI	TTAA	6 cut(s)	291, 425, 561, 966, 2093, 2443
SatI	GCNGC	9 cut(s)	635, 740, 912, 1296, 1398, 2110, 2366, 2381, 2405
Sau3AI	GATC	6 cut(s)	184, 607, 955, 2065, 2205, 2392
Sau96I	GGNCC	9 cut(s)	1109, 1118, 1416, 1424, 1750, 1788, 1789, 1830, 2214
ScaI	AGTACT	1 cut(s)	799
SchI	GAGTC	4 cut(s)	269, 295, 1541, 2298
ScrFI	CCNGG	6 cut(s)	125, 126, 572, 605, 991, 1961
SduI	GDGCHC	6 cut(s)	86, 604, 1154, 1792, 2130, 2356
SexAI	ACCWGGT	1 cut(s)	1959
SfaNI	GCATC	5 cut(s)	198, 519, 1244, 1282, 2142
SfcI	CTRYAG	2 cut(s)	594, 1195
SfoI	GGCGCC	1 cut(s)	2311
SinI	GGWCC	4 cut(s)	1109, 1118, 1416, 2214
SmaI	CCCGGG	1 cut(s)	126
SmiMI	CAYNNNNRTG	1 cut(s)	1571
SmlI	CTYRAG	4 cut(s)	927, 1634, 2030, 2291
SmoI	CTYRAG	4 cut(s)	927, 1634, 2030, 2291
SseBI	AGGCCT	1 cut(s)	1842
SsiI	CCGC	4 cut(s)	911, 1004, 2286, 2404
SspDI	GGCGCC	1 cut(s)	2309
SspI	AATATT	1 cut(s)	1667
SspMI	CTAG	8 cut(s)	432, 465, 495, 614, 714, 1089, 1953, 2037
SstI	GAGCTC	1 cut(s)	1154
StuI	AGGCCT	1 cut(s)	1842
StyD4I	CCNGG	6 cut(s)	123, 124, 570, 603, 989, 1959
StyI	CCWWGG	3 cut(s)	442, 1572, 2007
TaaI	ACNGT	5 cut(s)	193, 876, 1367, 1588, 2252
TaiI	ACGT	4 cut(s)	153, 1231, 1824, 1855
TaqI	TCGA	6 cut(s)	80, 221, 689, 1099, 1530, 2052
TatI	WGTACW	1 cut(s)	797
TauI	GCSGC	2 cut(s)	914, 2407
TfiI	GAWTC	9 cut(s)	101, 386, 642, 682, 733, 751, 845, 1208, 2425
Tru1I	TTAA	6 cut(s)	291, 425, 561, 966, 2093, 2443
Tru9I	TTAA	6 cut(s)	291, 425, 561, 966, 2093, 2443
TscAI	CASTG	9 cut(s)	345, 767, 879, 1132, 1267, 1326, 1390, 1593, 1863
TseFI	GTSAC	3 cut(s)	316, 580, 1321
TseI	GCWGC	7 cut(s)	634, 739, 1295, 1397, 2109, 2365, 2380
Tsp45I	GTSAC	3 cut(s)	316, 580, 1321
TspGWI	ACGGA	2 cut(s)	1890, 1925
TspMI	CCCGGG	1 cut(s)	124
TspRI	CASTG	9 cut(s)	345, 767, 879, 1132, 1267, 1326, 1390, 1593, 1863
VpaK11BI	GGWCC	4 cut(s)	1109, 1118, 1416, 2214
XapI	RAATTY	3 cut(s)	268, 1190, 2086
XbaI	TCTAGA	1 cut(s)	1952
XceI	RCATGY	6 cut(s)	35, 373, 403, 941, 1930, 2029
XmaI	CCCGGG	1 cut(s)	124
XmnI	GAANNNNTTC	1 cut(s)	660
XspI	CTAG	8 cut(s)	432, 465, 495, 614, 714, 1089, 1953, 2037
ZrmI	AGTACT	1 cut(s)	799
Zsp2I	ATGCAT	2 cut(s)	534, 2157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.