Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000316

Physical Location & Seq

Genomic Coordinates Forward (+)

37006941 .. 37009724

Gene Structure 2784 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0313300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1107 bp

ATGGTGATTTCTGATGGATCTGGAGGCCTTGGCTGTGACCAAAATAGTGATGGTAATGATGCTAAACCTCAACCACCACCATCTCAGCACGAAAATGGGGAATCATCAAAACAGAATTCGATATTCTCGCTTACTCTTGATGAAATTCAAAGCAAGAGTGGGAAGAGTTTTGGGTCCATGAACATGGATGAGTTCCTTGCCAACATATGGAGTGTTGATGAAAATCAAGTTTGTGAAGAACAACCTAACCAAGGTGATCATGAGGACCCTTTAAATGATGGGAAAGACACAACTTCAAAGACGGGATCTCTTTCTCGTCAGGGATCATTCTCCATTCCTACCCCACTTTGCAAGAAAACTGTGGATGAGGTATGGTCAGAGATCGACAAAACTCAACCACCACCCCCTCCTAACAACATGAGTATTAATCCTGGACCTCCCCAGCGCCAACCAACAATCGGAGAAATAACTCTGGAAGATTTCCTGGTAAAAGCTGGAATAGTTCAAGAAAGACCTCAGAACGGAATGGAAAGTACTACAATTCAACCACACGGTGGTAACACTAACAATTGTAACGTGGCAACTAGCAGCAGCACATATGGGGATACAAGTTTTGGAATGGGAAATAATTTGATTGGTTCAGGGTTTTTTAATCCTCAAGGTTTTGTGCCAAATAATTTGTCCGGGAATGGATATGCAACTGCTCCATATCCAATGTTTGGAGAGAGAAAAATGGGGCTGGGAGAATCATCTTGTGGAGGTACTAGTACTGCAATTGAGAAATGTCATAGTTTGCCAGAATCTAGTGGGACAAACAACAAGAAGAGGATAATCGATGGTCCACCAGAGGTACTAGTGGAGCGGAGGCAACGCAGGATGATCAAGAATCGAGAGTCAGCAGCTCGGTCTCGTGCAAGGAAACAGGCATATACTGTGGAGCTAGAAGCTGAGCTGAATCAACTTCAAGATGAGAATATAAAGCTAAAGCAATGCTTGGCCGAAATCGAACAGAGGCGAAAACAAGAGGTCATGAGAAGGAAACGGCCGACAAAAGCACAAAAGCTGGCAGCAAAGTTGAAGACAATAAGGAGGTCTGTAAGCGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0010016 GO:0010073 GO:0010074 GO:0010076 GO:0010077 GO:0010223 GO:0010228 GO:0010229 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048367 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080006 GO:0080090 GO:0090567 GO:0098727 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox_KN POX

Protein Analysis

368

Amino Acids

40.21

Weight (kDa)

6.49

Isoelectric Point (pI)

54.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	287 - 337	8.9e-09	Basic region leucine zipper
bZIP_1	PF00170	288 - 340	6.2e-11	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000316)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G33300
fragaria_vesca	FvH4_3g26472 FvH4_5g30650 FvH4_5g30650 FvH4_5g30650 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250
malus_domestica	MD08G1198100.v1.1 MD08G1222000.v1.1 MD15G1385400.v1.1 MD15G1440800.v1.1
prunus_persica	Prupe.1G532100_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1
pyrus_communis	pycom08g17030 pycom08g17040 pycom08g19270 pycom08g19280 pycom15g34550 pycom15g36860 pycom15g38860
rosa_chinensis	RchiOBHm_Chr6g0258571 RchiOBHm_Chr6g0258581 RchiOBHm_Chr6g0258621 RchiOBHm_Chr7g0225511 RchiOBHm_Chr7g0230561 RchiOBHm_Chr7g0230571 RchiOBHm_Chr7g0236371 RchiOBHm_Chr7g0236391
rosa_laevigata	RLG00000001080 RLG00000001810 RLG00000014605
rosa_multiflora	Rmu_co8399019.1_g000001 Rmu_sc0002222.1_g000016 Rmu_sc0002449.1_g000032 Rmu_sc0003720.1_g000005 Rmu_sc0005578.1_g000003 Rmu_sc0011035.1_g000002 Rmu_sc0012681.1_g000001 Rmu_sc0023362.1_g000001 Rmu_sc0023858.1_g000001 Rmu_sc0029314.1_g000001
rosa_roxburghii	Rroxscaffold_178G00437500 Rroxscaffold_178G00437540 Rroxscaffold_3G00225100 Rroxscaffold_3G00225110 Rroxscaffold_3G00225140 Rroxscaffold_3G00225170 Rroxscaffold_3G00225190 Rroxscaffold_3G00229880 Rroxscaffold_3G00233730 Rroxscaffold_7G00205760 Rroxscaffold_7G00205780 Rroxscaffold_7G00205820 Rroxscaffold_7G00205860
rosa_rugosa	Rorug03G0221800 Rorug03G0270500 Rorug05G0313300 Rorug05G0582400 Rorug05G0582500 Rorug07G0230200.1 Rorug07G0230300 Rorug07G0230400 Rorug07G0295100 Rorug07G0296900
rosa_samantha	Rh6AG098800 Rh6AG098900 Rh6AG184000 Rh6BG090700 Rh6BG090900 Rh6CG087500 Rh6CG087600 Rh6DG081800 Rh6DG082000 Rh7AG373100 Rh7AG412900 Rh7AG413000 Rh7AG451100 Rh7AG451200 Rh7BG364900 Rh7BG422800 Rh7BG422900 Rh7CG391400 Rh7CG431300 Rh7CG431400 Rh7CG469300 Rh7CG470800 Rh7CG471300 Rh7CG471400 Rh7DG367900 Rh7DG368000 Rh7DG375800 Rh7DG408800 Rh7DG440500 Rh7DG440600
rosa_wichuraiana	Rw0G007810 Rw6G008570 Rw6G008580 Rw7G031720 Rw7G034090 Rw7G037500 Rw7G037510 Rw7G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	207, 554, 719
AccBSI	CCGCTC	1 cut(s)	862
AciI	CCGC	1 cut(s)	862
AclWI	GGATC	3 cut(s)	25, 313, 331
AcoI	YGGCCR	2 cut(s)	996, 1043
AcsI	RAATTY	2 cut(s)	115, 144
AdeI	CACNNNGTG	1 cut(s)	554
AfaI	GTAC	4 cut(s)	535, 763, 769, 852
AfeI	AGCGCT	1 cut(s)	1102
AfiI	CCNNNNNNNGG	6 cut(s)	207, 251, 458, 521, 554, 719
AgsI	TTSAA	6 cut(s)	149, 297, 506, 545, 965, 1078
AhlI	ACTAGT	2 cut(s)	764, 853
AjnI	CCWGG	2 cut(s)	430, 483
AluBI	AGCT	7 cut(s)	494, 902, 940, 947, 952, 982, 1063
AluI	AGCT	7 cut(s)	494, 902, 940, 947, 952, 982, 1063
Alw26I	GTCTC	1 cut(s)	912
AlwI	GGATC	3 cut(s)	25, 313, 331
Aor51HI	AGCGCT	1 cut(s)	1102
AoxI	GGCC	3 cut(s)	25, 996, 1043
ApeKI	GCWGC	4 cut(s)	588, 591, 899, 1067
ApoI	RAATTY	2 cut(s)	115, 144
ArsI	GACNNNNNNTTYG	2 cut(s)	665, 697
AseI	ATTAAT	1 cut(s)	426
AspLEI	GCGC	2 cut(s)	447, 1103
AspS9I	GGNCC	4 cut(s)	174, 265, 434, 839
AsuC2I	CCSGG	1 cut(s)	685
AsuHPI	GGTGA	2 cut(s)	16, 266
AvaII	GGWCC	4 cut(s)	174, 265, 434, 839
BauI	CACGAG	1 cut(s)	909
BbsI	GAAGAC	1 cut(s)	1085
BbvI	GCAGC	4 cut(s)	600, 603, 911, 1079
BccI	CCATC	5 cut(s)	8, 44, 88, 272, 830
BceAI	ACGGC	1 cut(s)	1058
BciT130I	CCWGG	2 cut(s)	432, 485
BciVI	GTATCC	1 cut(s)	598
BclI	TGATCA	2 cut(s)	256, 879
BcnI	CCSGG	1 cut(s)	685
BcoDI	GTCTC	1 cut(s)	912
BcuI	ACTAGT	2 cut(s)	764, 853
BfaI	CTAG	5 cut(s)	585, 765, 804, 854, 941
BfoI	RGCGCY	2 cut(s)	448, 1104
BfuI	GTATCC	1 cut(s)	598
BisI	GCNGC	4 cut(s)	589, 592, 900, 1068
BlpI	GCTNAGC	1 cut(s)	948
BlsI	GCNGC	4 cut(s)	590, 593, 901, 1069
BmcAI	AGTACT	2 cut(s)	535, 769
Bme1390I	CCNGG	3 cut(s)	432, 485, 685
Bme18I	GGWCC	4 cut(s)	174, 265, 434, 839
BmgT120I	GGNCC	4 cut(s)	174, 265, 434, 839
BmiI	GGNNCC	2 cut(s)	175, 267
BmrFI	CCNGG	3 cut(s)	432, 485, 685
BmsI	GCATC	1 cut(s)	49
BpiI	GAAGAC	1 cut(s)	1085
BpmI	CTGGAG	1 cut(s)	42
Bpu1102I	GCTNAGC	1 cut(s)	948
BpuEI	CTTGAG	1 cut(s)	642
BpuMI	CCSGG	1 cut(s)	685
Bsa29I	ATCGAT	1 cut(s)	834
BsaBI	GATNNNNATC	1 cut(s)	222
BsaI	GGTCTC	1 cut(s)	912
BsaJI	CCNNGG	2 cut(s)	28, 250
Bsc4I	CCNNNNNNNGG	6 cut(s)	207, 251, 458, 521, 554, 719
Bse3DI	GCAATG	1 cut(s)	995
Bse8I	GATNNNNATC	1 cut(s)	222
BseBI	CCWGG	2 cut(s)	432, 485
BseCI	ATCGAT	1 cut(s)	834
BseDI	CCNNGG	2 cut(s)	28, 250
BseGI	GGATG	3 cut(s)	193, 370, 882
BseJI	GATNNNNATC	1 cut(s)	222
BseLI	CCNNNNNNNGG	6 cut(s)	207, 251, 458, 521, 554, 719
BseMI	GCAATG	1 cut(s)	995
BseMII	CTCAG	3 cut(s)	98, 530, 939
BseX3I	CGGCCG	1 cut(s)	1043
BseXI	GCAGC	4 cut(s)	600, 603, 911, 1079
BseYI	CCCAGC	2 cut(s)	441, 739
Bsh1285I	CGRYCG	1 cut(s)	1046
BshFI	GGCC	3 cut(s)	27, 998, 1045
BshVI	ATCGAT	1 cut(s)	834
BsiEI	CGRYCG	1 cut(s)	1046
BsiSI	CCGG	1 cut(s)	684
BslFI	GGGAC	1 cut(s)	823
BslI	CCNNNNNNNGG	6 cut(s)	207, 251, 458, 521, 554, 719
BsmAI	GTCTC	1 cut(s)	912
BsmFI	GGGAC	1 cut(s)	823
BsnI	GGCC	3 cut(s)	27, 998, 1045
Bso31I	GGTCTC	1 cut(s)	912
Bsp143I	GATC	6 cut(s)	17, 256, 305, 323, 381, 879
Bsp1720I	GCTNAGC	1 cut(s)	948
BspACI	CCGC	1 cut(s)	862
BspANI	GGCC	3 cut(s)	27, 998, 1045
BspCNI	CTCAG	3 cut(s)	97, 529, 940
BspDI	ATCGAT	1 cut(s)	834
BspHI	TCATGA	2 cut(s)	259, 1029
BspLI	GGNNCC	2 cut(s)	175, 267
BspPI	GGATC	3 cut(s)	25, 313, 331
BspTNI	GGTCTC	1 cut(s)	912
BsrBI	CCGCTC	1 cut(s)	862
BsrDI	GCAATG	1 cut(s)	995
BssECI	CCNNGG	2 cut(s)	28, 250
BssMI	GATC	6 cut(s)	17, 256, 305, 323, 381, 879
BssSI	CACGAG	1 cut(s)	909
BssT1I	CCWWGG	2 cut(s)	28, 250
Bst2BI	CACGAG	1 cut(s)	909
Bst2UI	CCWGG	2 cut(s)	432, 485
Bst4CI	ACNGT	3 cut(s)	361, 554, 934
Bst6I	CTCTTC	2 cut(s)	158, 818
BstC8I	GCNNGC	1 cut(s)	1065
BstDEI	CTNAG	3 cut(s)	84, 516, 948
BstENI	CCTNNNNNAGG	1 cut(s)	249
BstF5I	GGATG	3 cut(s)	193, 370, 882
BstH2I	RGCGCY	2 cut(s)	448, 1104
BstHHI	GCGC	2 cut(s)	447, 1103
BstKTI	GATC	6 cut(s)	20, 259, 308, 326, 384, 882
BstMAI	GTCTC	1 cut(s)	912
BstMBI	GATC	6 cut(s)	17, 256, 305, 323, 381, 879
BstMCI	CGRYCG	1 cut(s)	1046
BstNI	CCWGG	2 cut(s)	432, 485
BstSCI	CCNGG	3 cut(s)	430, 483, 683
BstV1I	GCAGC	4 cut(s)	600, 603, 911, 1079
BstV2I	GAAGAC	1 cut(s)	1085
BstX2I	RGATCY	2 cut(s)	17, 305
BstXI	CCANNNNNNTGG	1 cut(s)	184
BstYI	RGATCY	2 cut(s)	17, 305
BstZI	CGGCCG	1 cut(s)	1043
Bsu15I	ATCGAT	1 cut(s)	834
BsuI	GTATCC	1 cut(s)	598
BsuRI	GGCC	3 cut(s)	27, 998, 1045
BsuTUI	ATCGAT	1 cut(s)	834
BtsCI	GGATG	3 cut(s)	193, 370, 882
Cac8I	GCNNGC	1 cut(s)	1065
CciI	TCATGA	2 cut(s)	259, 1029
CfoI	GCGC	2 cut(s)	447, 1103
Cfr13I	GGNCC	4 cut(s)	174, 265, 434, 839
ClaI	ATCGAT	1 cut(s)	834
Csp6I	GTAC	4 cut(s)	534, 762, 768, 851
CviAII	CATG	5 cut(s)	178, 184, 260, 418, 1030
CviQI	GTAC	4 cut(s)	534, 762, 768, 851
DdeI	CTNAG	3 cut(s)	84, 516, 948
DpnI	GATC	6 cut(s)	19, 258, 307, 325, 383, 881
DpnII	GATC	6 cut(s)	17, 256, 305, 323, 381, 879
DraI	TTTAAA	1 cut(s)	273
DraIII	CACNNNGTG	1 cut(s)	554
EaeI	YGGCCR	2 cut(s)	996, 1043
EagI	CGGCCG	1 cut(s)	1043
Eam1104I	CTCTTC	2 cut(s)	158, 818
EarI	CTCTTC	2 cut(s)	158, 818
EclXI	CGGCCG	1 cut(s)	1043
Eco130I	CCWWGG	2 cut(s)	28, 250
Eco147I	AGGCCT	1 cut(s)	27
Eco31I	GGTCTC	1 cut(s)	912
Eco47I	GGWCC	4 cut(s)	174, 265, 434, 839
Eco47III	AGCGCT	1 cut(s)	1102
Eco52I	CGGCCG	1 cut(s)	1043
EcoNI	CCTNNNNNAGG	1 cut(s)	249
EcoO109I	RGGNCCY	1 cut(s)	265
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	2 cut(s)	430, 483
EcoT14I	CCWWGG	2 cut(s)	28, 250
ErhI	CCWWGG	2 cut(s)	28, 250
FaeI	CATG	5 cut(s)	181, 187, 263, 421, 1033
FalI	AAGNNNNNCTT	2 cut(s)	977, 1009
FaqI	GGGAC	1 cut(s)	823
FatI	CATG	5 cut(s)	177, 183, 259, 417, 1029
FauNDI	CATATG	2 cut(s)	206, 598
FbaI	TGATCA	2 cut(s)	256, 879
Fnu4HI	GCNGC	4 cut(s)	589, 592, 900, 1068
FokI	GGATG	3 cut(s)	200, 377, 889
Fsp4HI	GCNGC	4 cut(s)	589, 592, 900, 1068
FspBI	CTAG	5 cut(s)	585, 765, 804, 854, 941
GlaI	GCGC	2 cut(s)	446, 1102
GluI	GCNGC	4 cut(s)	589, 592, 900, 1068
GsaI	CCCAGC	2 cut(s)	445, 743
GsuI	CTGGAG	1 cut(s)	42
HaeII	RGCGCY	2 cut(s)	448, 1104
HaeIII	GGCC	3 cut(s)	27, 998, 1045
HapII	CCGG	1 cut(s)	684
HhaI	GCGC	2 cut(s)	447, 1103
Hin1II	CATG	5 cut(s)	181, 187, 263, 421, 1033
Hin6I	GCGC	2 cut(s)	445, 1101
HinP1I	GCGC	2 cut(s)	445, 1101
HinfI	GANTC	6 cut(s)	101, 746, 800, 886, 893, 955
HpaII	CCGG	1 cut(s)	684
HphI	GGTGA	2 cut(s)	16, 266
Hpy166II	GTNNAC	1 cut(s)	842
Hpy188I	TCNGA	4 cut(s)	13, 379, 461, 519
Hpy188III	TCNNGA	9 cut(s)	21, 137, 260, 473, 506, 883, 890, 965, 1030
Hpy8I	GTNNAC	1 cut(s)	842
HpyAV	CCTTC	1 cut(s)	1029
HpyCH4III	ACNGT	3 cut(s)	361, 554, 934
HpyCH4IV	ACGT	1 cut(s)	576
HpyCH4V	TGCA	4 cut(s)	351, 698, 773, 914
HpyF3I	CTNAG	3 cut(s)	84, 516, 948
HpySE526I	ACGT	1 cut(s)	576
Hsp92II	CATG	5 cut(s)	181, 187, 263, 421, 1033
HspAI	GCGC	2 cut(s)	445, 1101
Ksp22I	TGATCA	2 cut(s)	256, 879
Kzo9I	GATC	6 cut(s)	17, 256, 305, 323, 381, 879
LmnI	GCTCC	3 cut(s)	709, 859, 937
Lsp1109I	GCAGC	4 cut(s)	600, 603, 911, 1079
LweI	GCATC	1 cut(s)	49
MaeI	CTAG	5 cut(s)	585, 765, 804, 854, 941
MaeII	ACGT	1 cut(s)	576
MaeIII	GTNAC	3 cut(s)	35, 557, 572
MalI	GATC	6 cut(s)	19, 258, 307, 325, 383, 881
MbiI	CCGCTC	1 cut(s)	862
MboI	GATC	6 cut(s)	17, 256, 305, 323, 381, 879
MboII	GAAGA	5 cut(s)	175, 248, 488, 835, 1090
MfeI	CAATTG	2 cut(s)	568, 774
MflI	RGATCY	2 cut(s)	17, 305
MluCI	AATT	7 cut(s)	115, 144, 540, 568, 628, 676, 774
MlyI	GAGTC	1 cut(s)	902
MseI	TTAA	3 cut(s)	272, 426, 651
MslI	CAYNNNNRTG	2 cut(s)	93, 182
MspI	CCGG	1 cut(s)	684
MspR9I	CCNGG	3 cut(s)	432, 485, 685
MunI	CAATTG	2 cut(s)	568, 774
MvaI	CCWGG	2 cut(s)	432, 485
NciI	CCSGG	1 cut(s)	685
NdeI	CATATG	2 cut(s)	206, 598
NdeII	GATC	6 cut(s)	17, 256, 305, 323, 381, 879
NlaIII	CATG	5 cut(s)	181, 187, 263, 421, 1033
NlaIV	GGNNCC	2 cut(s)	175, 267
NmuCI	GTSAC	1 cut(s)	35
PagI	TCATGA	2 cut(s)	259, 1029
PceI	AGGCCT	1 cut(s)	27
PfeI	GAWTC	5 cut(s)	101, 746, 800, 886, 955
PflMI	CCANNNNNTGG	3 cut(s)	207, 554, 719
PfoI	TCCNGGA	2 cut(s)	430, 683
PkrI	GCNGC	4 cut(s)	590, 593, 901, 1069
PleI	GAGTC	1 cut(s)	901
PpsI	GAGTC	1 cut(s)	901
PpuMI	RGGWCCY	1 cut(s)	265
PshBI	ATTAAT	1 cut(s)	426
Psp5II	RGGWCCY	1 cut(s)	265
Psp6I	CCWGG	2 cut(s)	430, 483
PspFI	CCCAGC	2 cut(s)	441, 739
PspGI	CCWGG	2 cut(s)	430, 483
PspN4I	GGNNCC	2 cut(s)	175, 267
PspPI	GGNCC	4 cut(s)	174, 265, 434, 839
PspPPI	RGGWCCY	1 cut(s)	265
PsuI	RGATCY	2 cut(s)	17, 305
RsaI	GTAC	4 cut(s)	535, 763, 769, 852
RsaNI	GTAC	4 cut(s)	534, 762, 768, 851
RseI	CAYNNNNRTG	2 cut(s)	93, 182
SaqAI	TTAA	3 cut(s)	272, 426, 651
SatI	GCNGC	4 cut(s)	589, 592, 900, 1068
Sau3AI	GATC	6 cut(s)	17, 256, 305, 323, 381, 879
Sau96I	GGNCC	4 cut(s)	174, 265, 434, 839
ScaI	AGTACT	2 cut(s)	535, 769
SchI	GAGTC	1 cut(s)	902
ScrFI	CCNGG	3 cut(s)	432, 485, 685
SfaNI	GCATC	1 cut(s)	49
SinI	GGWCC	4 cut(s)	174, 265, 434, 839
SmiMI	CAYNNNNRTG	2 cut(s)	93, 182
SmlI	CTYRAG	1 cut(s)	657
SmoI	CTYRAG	1 cut(s)	657
SpeI	ACTAGT	2 cut(s)	764, 853
Sse9I	AATT	7 cut(s)	115, 144, 540, 568, 628, 676, 774
SseBI	AGGCCT	1 cut(s)	27
SsiI	CCGC	1 cut(s)	862
SspMI	CTAG	5 cut(s)	585, 765, 804, 854, 941
StuI	AGGCCT	1 cut(s)	27
StyD4I	CCNGG	3 cut(s)	430, 483, 683
StyI	CCWWGG	2 cut(s)	28, 250
TaaI	ACNGT	3 cut(s)	361, 554, 934
TaiI	ACGT	1 cut(s)	579
TaqI	TCGA	5 cut(s)	119, 384, 834, 889, 1005
TaqII	GACCGA	1 cut(s)	894
TasI	AATT	7 cut(s)	115, 144, 540, 568, 628, 676, 774
TatI	WGTACW	2 cut(s)	533, 767
TfiI	GAWTC	5 cut(s)	101, 746, 800, 886, 955
Tru1I	TTAA	3 cut(s)	272, 426, 651
Tru9I	TTAA	3 cut(s)	272, 426, 651
TseFI	GTSAC	1 cut(s)	35
TseI	GCWGC	4 cut(s)	588, 591, 899, 1067
Tsp45I	GTSAC	1 cut(s)	35
TspDTI	ATGAA	3 cut(s)	156, 194, 234
TspGWI	ACGGA	1 cut(s)	537
Van91I	CCANNNNNTGG	3 cut(s)	207, 554, 719
VpaK11BI	GGWCC	4 cut(s)	174, 265, 434, 839
VspI	ATTAAT	1 cut(s)	426
XagI	CCTNNNNNAGG	1 cut(s)	249
XapI	RAATTY	2 cut(s)	115, 144
XcmI	CCANNNNNNNNNTGG	1 cut(s)	47
XspI	CTAG	5 cut(s)	585, 765, 804, 854, 941
ZrmI	AGTACT	2 cut(s)	535, 769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.