Rmu_sc0005578.1_g000003

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005578.1
OG0000316
Physical Location & Seq
Reverse (-)
6816 .. 11990
5175 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005578.1_g000003.1.cds

Sequence Viewer

Length: 1392 bp
atgtcagacagcgacactagtggcattggtgttacagaaattcagaagccaatgagattaagaaagggatctaagcgactagagtttataggatggggttctaaacctctcattgagtttctaagatccattgggaaggatacaactgagaagatatcccagcttgatttggacaagattatctgtaactacatcagagataaagagctttatgtgaccaaggacaagagaaaggctctatgtgatcaaagtctgcaatccattttcagaacgaaatttgtattcctggtaaggatatatggtcttctaggggaacatcttgccgagaacataacagaggatagtggaagcgaggatgaggaagaaatcaaattggaagataagaacaatggtactacgcatgaacgcaagaagagaagagtgagctctgatacaaccatagcatctgatgaaaagaaagcaagtcctagattccaaaagggctgtttcacatctattatccctgagaatatgaagcttgtttacgtaaagaggagcttactggagaagttactgaaggagcctgatcattcggaaagcaagatcgatagcgacgacttcgtctccggcttcgaaggcaagtccaacctcttttggcagcttgaactggatctccgactctttcatcttcctctcaattccatcgaccacatctccgtctctggctcctcgacgactccctccaactccctccctccatggttccgtccttcaaggcgagcacaattgaacgccagcgagtccaaagctatcttttgtggtcgctggagttctccggaagttggccggaagtcggccggagactcgtcggagttgactgaagacctttctagagaggggagagagagacgaggcaaccttgttgttgttgacaacagtgtggtagaagccatcaacactggaattcgtgcggctctgccaggtttgggtgcccaacaagggttaggtgtccagatcaaatatggccaagtctttgggttatccttgggcccaatcagaacccatctgttgggtctaccttcctctagccctagcttgatggacaaggcaaaaatgttgtttcttatgtggtgcatcgaatcgatggacaacacaacaaagggttgcaacaaggaagggactctagctgatgaaacacgaaatgatgatgaagtgttcaacgatgtcccagactatagaagattgaaggttgaagacgtgaaggctatgacgtttaagacagtagaggacgcggagaggttctattctgcatattccttggcacttcgatttggatttaggaaggataccaaaggagaggctgaaggtacgatccggaggagacaatggctttgcaacaagcaagggacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Plus-3 SWIB

Protein Analysis

463

Amino Acids

52.23

Weight (kDa)

8.3

Isoelectric Point (pI)

48.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000316)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G33300
fragaria_vesca FvH4_3g26472 FvH4_5g30650 FvH4_5g30650 FvH4_5g30650 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250
malus_domestica MD08G1198100.v1.1 MD08G1222000.v1.1 MD15G1385400.v1.1 MD15G1440800.v1.1
prunus_persica Prupe.1G532100_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1
pyrus_communis pycom08g17030 pycom08g17040 pycom08g19270 pycom08g19280 pycom15g34550 pycom15g36860 pycom15g38860
rosa_chinensis RchiOBHm_Chr6g0258571 RchiOBHm_Chr6g0258581 RchiOBHm_Chr6g0258621 RchiOBHm_Chr7g0225511 RchiOBHm_Chr7g0230561 RchiOBHm_Chr7g0230571 RchiOBHm_Chr7g0236371 RchiOBHm_Chr7g0236391
rosa_laevigata RLG00000001080 RLG00000001810 RLG00000014605
rosa_multiflora Rmu_co8399019.1_g000001 Rmu_sc0002222.1_g000016 Rmu_sc0002449.1_g000032 Rmu_sc0003720.1_g000005 Rmu_sc0005578.1_g000003 Rmu_sc0011035.1_g000002 Rmu_sc0012681.1_g000001 Rmu_sc0023362.1_g000001 Rmu_sc0023858.1_g000001 Rmu_sc0029314.1_g000001
rosa_roxburghii Rroxscaffold_178G00437500 Rroxscaffold_178G00437540 Rroxscaffold_3G00225100 Rroxscaffold_3G00225110 Rroxscaffold_3G00225140 Rroxscaffold_3G00225170 Rroxscaffold_3G00225190 Rroxscaffold_3G00229880 Rroxscaffold_3G00233730 Rroxscaffold_7G00205760 Rroxscaffold_7G00205780 Rroxscaffold_7G00205820 Rroxscaffold_7G00205860
rosa_rugosa Rorug03G0221800 Rorug03G0270500 Rorug05G0313300 Rorug05G0582400 Rorug05G0582500 Rorug07G0230200.1 Rorug07G0230300 Rorug07G0230400 Rorug07G0295100 Rorug07G0296900
rosa_samantha Rh6AG098800 Rh6AG098900 Rh6AG184000 Rh6BG090700 Rh6BG090900 Rh6CG087500 Rh6CG087600 Rh6DG081800 Rh6DG082000 Rh7AG373100 Rh7AG412900 Rh7AG413000 Rh7AG451100 Rh7AG451200 Rh7BG364900 Rh7BG422800 Rh7BG422900 Rh7CG391400 Rh7CG431300 Rh7CG431400 Rh7CG469300 Rh7CG470800 Rh7CG471300 Rh7CG471400 Rh7DG367900 Rh7DG368000 Rh7DG375800 Rh7DG408800 Rh7DG440500 Rh7DG440600
rosa_wichuraiana Rw0G007810 Rw6G008570 Rw6G008580 Rw7G031720 Rw7G034090 Rw7G037500 Rw7G037510 Rw7G037580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 599
AccB1I GGYRCC 1 cut(s) 968
AccB7I CCANNNNNTGG 1 cut(s) 1048
AccI GTMKAC 1 cut(s) 1054
AccII CGCG 1 cut(s) 1271
AccIII TCCGGA 2 cut(s) 814, 1353
AciI CCGC 2 cut(s) 950, 1271
AclWI GGATC 4 cut(s) 76, 120, 657, 1345
AcoI YGGCCR 3 cut(s) 823, 834, 1003
AcsI RAATTY 3 cut(s) 39, 275, 942
AcuI CTGAAG 3 cut(s) 575, 879, 1362
AfaI GTAC 2 cut(s) 394, 1348
AfiI CCNNNNNNNGG 5 cut(s) 821, 832, 965, 978, 1048
AgsI TTSAA 6 cut(s) 644, 753, 769, 1198, 1225, 1232
AhlI ACTAGT 1 cut(s) 17
AjiI CACGTC 1 cut(s) 1237
AjnI CCWGG 2 cut(s) 285, 958
AloI GAACNNNNNNTCC 2 cut(s) 636, 668
AluBI AGCT 9 cut(s) 163, 208, 426, 517, 537, 640, 788, 1074, 1166
AluI AGCT 9 cut(s) 163, 208, 426, 517, 537, 640, 788, 1074, 1166
Alw21I GWGCWC 2 cut(s) 428, 763
Alw26I GTCTC 5 cut(s) 607, 703, 834, 880, 1354
AlwI GGATC 4 cut(s) 76, 120, 657, 1345
Aor13HI TCCGGA 2 cut(s) 814, 1353
AoxI GGCC 4 cut(s) 823, 834, 1003, 1027
ApaI GGGCCC 1 cut(s) 1031
ApeKI GCWGC 1 cut(s) 637
ApoI RAATTY 3 cut(s) 39, 275, 942
ArsI GACNNNNNNTTYG 2 cut(s) 1353, 1385
AspS9I GGNCC 2 cut(s) 1027, 1028
AsuII TTCGAA 1 cut(s) 612
BaeGI GKGCMC 2 cut(s) 973, 1031
BalI TGGCCA 1 cut(s) 1005
BanI GGYRCC 1 cut(s) 968
BanII GRGCYC 2 cut(s) 428, 1031
BarI GAAGNNNNNNTAC 2 cut(s) 506, 538
BbsI GAAGAC 3 cut(s) 296, 867, 1239
Bbv12I GWGCWC 2 cut(s) 428, 763
BbvI GCAGC 1 cut(s) 649
BccI CCATC 6 cut(s) 87, 689, 938, 1050, 1072, 1117
BciT130I CCWGG 2 cut(s) 287, 960
BciVI GTATCC 2 cut(s) 133, 1318
BclI TGATCA 2 cut(s) 244, 565
BcoDI GTCTC 5 cut(s) 607, 703, 834, 880, 1354
BcuI ACTAGT 1 cut(s) 17
BfaI CTAG 8 cut(s) 18, 80, 308, 468, 870, 1065, 1071, 1163
BfmI CTRYAG 1 cut(s) 1213
BfuI GTATCC 2 cut(s) 133, 1318
BisI GCNGC 2 cut(s) 638, 951
BlsI GCNGC 2 cut(s) 639, 952
Bme1390I CCNGG 2 cut(s) 287, 960
BmgBI CACGTC 1 cut(s) 1237
BmgT120I GGNCC 2 cut(s) 1027, 1028
BmiI GGNNCC 5 cut(s) 561, 706, 743, 970, 1029
BmrFI CCNGG 2 cut(s) 287, 960
BmsI GCATC 2 cut(s) 452, 1122
BpiI GAAGAC 3 cut(s) 296, 867, 1239
BplI GAGNNNNNCTC 2 cut(s) 220, 252
BpmI CTGGAG 2 cut(s) 563, 826
Bpu14I TTCGAA 1 cut(s) 612
Bsa29I ATCGAT 2 cut(s) 585, 1121
BsaAI YACGTR 1 cut(s) 526
BsaJI CCNNGG 4 cut(s) 219, 737, 1023, 1296
BsaWI WCCGGW 2 cut(s) 814, 1353
BsaXI ACNNNNNCTCC 6 cut(s) 587, 617, 636, 666, 677, 707
Bsc4I CCNNNNNNNGG 5 cut(s) 821, 832, 965, 978, 1048
Bse1I ACTGG 3 cut(s) 546, 651, 943
BseAI TCCGGA 2 cut(s) 814, 1353
BseBI CCWGG 2 cut(s) 287, 960
BseCI ATCGAT 2 cut(s) 585, 1121
BseDI CCNNGG 4 cut(s) 219, 737, 1023, 1296
BseGI GGATG 2 cut(s) 98, 361
BseLI CCNNNNNNNGG 5 cut(s) 821, 832, 965, 978, 1048
BseMII CTCAG 2 cut(s) 138, 495
BseNI ACTGG 3 cut(s) 546, 651, 943
BseRI GAGGAG 3 cut(s) 547, 697, 1372
BseSI GKGCMC 2 cut(s) 973, 1031
BseX3I CGGCCG 1 cut(s) 834
BseXI GCAGC 1 cut(s) 649
BseYI CCCAGC 1 cut(s) 159
Bsh1236I CGCG 1 cut(s) 1271
Bsh1285I CGRYCG 1 cut(s) 837
BshFI GGCC 4 cut(s) 825, 836, 1005, 1029
BshNI GGYRCC 1 cut(s) 968
BshVI ATCGAT 2 cut(s) 585, 1121
BsiEI CGRYCG 1 cut(s) 837
BsiHKAI GWGCWC 2 cut(s) 428, 763
BsiSI CCGG 5 cut(s) 606, 815, 826, 837, 1354
BslFI GGGAC 2 cut(s) 1171, 1190
BslI CCNNNNNNNGG 5 cut(s) 821, 832, 965, 978, 1048
BsmAI GTCTC 5 cut(s) 607, 703, 834, 880, 1354
BsmBI CGTCTC 3 cut(s) 607, 703, 880
BsmFI GGGAC 2 cut(s) 1171, 1190
BsnI GGCC 4 cut(s) 825, 836, 1005, 1029
Bsp119I TTCGAA 1 cut(s) 612
Bsp120I GGGCCC 1 cut(s) 1027
Bsp1286I GDGCHC 4 cut(s) 428, 763, 973, 1031
Bsp13I TCCGGA 2 cut(s) 814, 1353
Bsp143I GATC 8 cut(s) 68, 125, 244, 565, 582, 649, 993, 1350
Bsp19I CCATGG 1 cut(s) 737
BspACI CCGC 2 cut(s) 950, 1271
BspANI GGCC 4 cut(s) 825, 836, 1005, 1029
BspCNI CTCAG 2 cut(s) 139, 496
BspDI ATCGAT 2 cut(s) 585, 1121
BspEI TCCGGA 2 cut(s) 814, 1353
BspFNI CGCG 1 cut(s) 1271
BspLI GGNNCC 5 cut(s) 561, 706, 743, 970, 1029
BspPI GGATC 4 cut(s) 76, 120, 657, 1345
BspT104I TTCGAA 1 cut(s) 612
BspT107I GGYRCC 1 cut(s) 968
BsrI ACTGG 3 cut(s) 546, 651, 943
BssECI CCNNGG 4 cut(s) 219, 737, 1023, 1296
BssMI GATC 8 cut(s) 68, 125, 244, 565, 582, 649, 993, 1350
BssT1I CCWWGG 4 cut(s) 219, 737, 1023, 1296
Bst2UI CCWGG 2 cut(s) 287, 960
Bst4CI ACNGT 2 cut(s) 917, 1261
Bst6I CTCTTC 2 cut(s) 407, 412
BstBAI YACGTR 1 cut(s) 526
BstBI TTCGAA 1 cut(s) 612
BstC8I GCNNGC 2 cut(s) 759, 775
BstDEI CTNAG 4 cut(s) 72, 122, 147, 504
BstDSI CCRYGG 1 cut(s) 737
BstF5I GGATG 2 cut(s) 98, 361
BstFNI CGCG 1 cut(s) 1271
BstKTI GATC 8 cut(s) 71, 128, 247, 568, 585, 652, 996, 1353
BstMAI GTCTC 5 cut(s) 607, 703, 834, 880, 1354
BstMBI GATC 8 cut(s) 68, 125, 244, 565, 582, 649, 993, 1350
BstMCI CGRYCG 1 cut(s) 837
BstMWI GCNNNNNNNGC 1 cut(s) 615
BstNI CCWGG 2 cut(s) 287, 960
BstSCI CCNGG 2 cut(s) 285, 958
BstSFI CTRYAG 1 cut(s) 1213
BstSLI GKGCMC 2 cut(s) 973, 1031
BstSNI TACGTA 1 cut(s) 526
BstUI CGCG 1 cut(s) 1271
BstV1I GCAGC 1 cut(s) 649
BstV2I GAAGAC 3 cut(s) 296, 867, 1239
BstX2I RGATCY 3 cut(s) 68, 125, 649
BstXI CCANNNNNNTGG 1 cut(s) 1013
BstYI RGATCY 3 cut(s) 68, 125, 649
BstZI CGGCCG 1 cut(s) 834
Bsu15I ATCGAT 2 cut(s) 585, 1121
BsuI GTATCC 2 cut(s) 133, 1318
BsuRI GGCC 4 cut(s) 825, 836, 1005, 1029
BsuTUI ATCGAT 2 cut(s) 585, 1121
BtgI CCRYGG 1 cut(s) 737
BtrI CACGTC 1 cut(s) 1237
BtsCI GGATG 2 cut(s) 98, 361
BtsIMutI CAGTG 2 cut(s) 922, 936
Cac8I GCNNGC 2 cut(s) 759, 775
Cfr13I GGNCC 2 cut(s) 1027, 1028
ClaI ATCGAT 2 cut(s) 585, 1121
CseI GACGC 1 cut(s) 1277
Csp6I GTAC 2 cut(s) 393, 1347
CviAII CATG 2 cut(s) 401, 738
CviQI GTAC 2 cut(s) 393, 1347
DdeI CTNAG 4 cut(s) 72, 122, 147, 504
DpnI GATC 8 cut(s) 70, 127, 246, 567, 584, 651, 995, 1352
DpnII GATC 8 cut(s) 68, 125, 244, 565, 582, 649, 993, 1350
DrdI GACNNNNNNGTC 1 cut(s) 599
DseDI GACNNNNNNGTC 1 cut(s) 599
EaeI YGGCCR 3 cut(s) 823, 834, 1003
EagI CGGCCG 1 cut(s) 834
Eam1104I CTCTTC 2 cut(s) 407, 412
EarI CTCTTC 2 cut(s) 407, 412
Ecl136II GAGCTC 1 cut(s) 426
EclXI CGGCCG 1 cut(s) 834
Eco105I TACGTA 1 cut(s) 526
Eco130I CCWWGG 4 cut(s) 219, 737, 1023, 1296
Eco24I GRGCYC 2 cut(s) 428, 1031
Eco32I GATATC 1 cut(s) 156
Eco52I CGGCCG 1 cut(s) 834
Eco53kI GAGCTC 1 cut(s) 426
Eco57I CTGAAG 3 cut(s) 575, 879, 1362
EcoICRI GAGCTC 1 cut(s) 426
EcoRI GAATTC 1 cut(s) 942
EcoRII CCWGG 2 cut(s) 285, 958
EcoRV GATATC 1 cut(s) 156
EcoT14I CCWWGG 4 cut(s) 219, 737, 1023, 1296
EcoT38I GRGCYC 2 cut(s) 428, 1031
ErhI CCWWGG 4 cut(s) 219, 737, 1023, 1296
Esp3I CGTCTC 3 cut(s) 607, 703, 880
FaeI CATG 2 cut(s) 404, 741
FalI AAGNNNNNCTT 2 cut(s) 521, 553
FaqI GGGAC 2 cut(s) 1171, 1190
FatI CATG 2 cut(s) 400, 737
FbaI TGATCA 2 cut(s) 244, 565
FblI GTMKAC 1 cut(s) 1054
Fnu4HI GCNGC 2 cut(s) 638, 951
FokI GGATG 2 cut(s) 105, 368
FriOI GRGCYC 2 cut(s) 428, 1031
Fsp4HI GCNGC 2 cut(s) 638, 951
FspBI CTAG 8 cut(s) 18, 80, 308, 468, 870, 1065, 1071, 1163
GluI GCNGC 2 cut(s) 638, 951
GsaI CCCAGC 1 cut(s) 163
GsuI CTGGAG 2 cut(s) 563, 826
HaeIII GGCC 4 cut(s) 825, 836, 1005, 1029
HapII CCGG 5 cut(s) 606, 815, 826, 837, 1354
HgaI GACGC 1 cut(s) 1277
Hin1II CATG 2 cut(s) 404, 741
HincII GTYRAC 2 cut(s) 855, 910
HindII GTYRAC 2 cut(s) 855, 910
HindIII AAGCTT 1 cut(s) 515
HinfI GANTC 7 cut(s) 471, 657, 715, 779, 842, 1118, 1159
HpaII CCGG 5 cut(s) 606, 815, 826, 837, 1354
Hpy166II GTNNAC 4 cut(s) 523, 855, 910, 1055
Hpy188III TCNNGA 4 cut(s) 815, 870, 991, 1354
Hpy8I GTNNAC 4 cut(s) 523, 855, 910, 1055
Hpy99I CGWCG 3 cut(s) 596, 715, 850
HpyCH4III ACNGT 2 cut(s) 917, 1261
HpyCH4IV ACGT 3 cut(s) 525, 1236, 1250
HpyCH4V TGCA 5 cut(s) 256, 1113, 1146, 1289, 1374
HpyF10VI GCNNNNNNNGC 1 cut(s) 615
HpyF3I CTNAG 4 cut(s) 72, 122, 147, 504
HpySE526I ACGT 3 cut(s) 525, 1236, 1250
Hsp92II CATG 2 cut(s) 404, 741
Kpn2I TCCGGA 2 cut(s) 814, 1353
Ksp22I TGATCA 2 cut(s) 244, 565
Kzo9I GATC 8 cut(s) 68, 125, 244, 565, 582, 649, 993, 1350
LmnI GCTCC 3 cut(s) 534, 559, 710
Lsp1109I GCAGC 1 cut(s) 649
LweI GCATC 2 cut(s) 452, 1122
MaeI CTAG 8 cut(s) 18, 80, 308, 468, 870, 1065, 1071, 1163
MaeII ACGT 3 cut(s) 525, 1236, 1250
MaeIII GTNAC 4 cut(s) 31, 185, 214, 549
MalI GATC 8 cut(s) 70, 127, 246, 567, 584, 651, 995, 1352
MboI GATC 8 cut(s) 68, 125, 244, 565, 582, 649, 993, 1350
MfeI CAATTG 1 cut(s) 764
MflI RGATCY 3 cut(s) 68, 125, 649
MhlI GDGCHC 4 cut(s) 428, 763, 973, 1031
MlsI TGGCCA 1 cut(s) 1005
MluCI AATT 6 cut(s) 39, 275, 371, 676, 764, 942
MluNI TGGCCA 1 cut(s) 1005
MlyI GAGTC 5 cut(s) 651, 709, 788, 836, 1153
MmeI TCCRAC 4 cut(s) 648, 679, 747, 828
Mox20I TGGCCA 1 cut(s) 1005
MroI TCCGGA 2 cut(s) 814, 1353
MscI TGGCCA 1 cut(s) 1005
MseI TTAA 2 cut(s) 59, 1254
Msp20I TGGCCA 1 cut(s) 1005
MspI CCGG 5 cut(s) 606, 815, 826, 837, 1354
MspR9I CCNGG 2 cut(s) 287, 960
MunI CAATTG 1 cut(s) 764
MvaI CCWGG 2 cut(s) 287, 960
MvnI CGCG 1 cut(s) 1271
MwoI GCNNNNNNNGC 1 cut(s) 615
NcoI CCATGG 1 cut(s) 737
NdeII GATC 8 cut(s) 68, 125, 244, 565, 582, 649, 993, 1350
NlaIII CATG 2 cut(s) 404, 741
NlaIV GGNNCC 5 cut(s) 561, 706, 743, 970, 1029
NmeAIII GCCGAG 1 cut(s) 349
NmuCI GTSAC 1 cut(s) 214
NspV TTCGAA 1 cut(s) 612
PcsI WCGNNNNNNNCGW 1 cut(s) 591
PfeI GAWTC 2 cut(s) 471, 1118
PflFI GACNNNGTC 1 cut(s) 599
PflMI CCANNNNNTGG 1 cut(s) 1048
PkrI GCNGC 2 cut(s) 639, 952
PleI GAGTC 5 cut(s) 651, 709, 787, 836, 1153
PpsI GAGTC 5 cut(s) 651, 709, 787, 836, 1153
Ppu21I YACGTR 1 cut(s) 526
Psp124BI GAGCTC 1 cut(s) 428
Psp6I CCWGG 2 cut(s) 285, 958
PspFI CCCAGC 1 cut(s) 159
PspGI CCWGG 2 cut(s) 285, 958
PspN4I GGNNCC 5 cut(s) 561, 706, 743, 970, 1029
PspOMI GGGCCC 1 cut(s) 1027
PspPI GGNCC 2 cut(s) 1027, 1028
PsuI RGATCY 3 cut(s) 68, 125, 649
PsyI GACNNNGTC 1 cut(s) 599
RsaI GTAC 2 cut(s) 394, 1348
RsaNI GTAC 2 cut(s) 393, 1347
SacI GAGCTC 1 cut(s) 428
SaqAI TTAA 2 cut(s) 59, 1254
SatI GCNGC 2 cut(s) 638, 951
Sau3AI GATC 8 cut(s) 68, 125, 244, 565, 582, 649, 993, 1350
Sau96I GGNCC 2 cut(s) 1027, 1028
SchI GAGTC 5 cut(s) 651, 709, 788, 836, 1153
ScrFI CCNGG 2 cut(s) 287, 960
SduI GDGCHC 4 cut(s) 428, 763, 973, 1031
SfaNI GCATC 2 cut(s) 452, 1122
SfcI CTRYAG 1 cut(s) 1213
SfuI TTCGAA 1 cut(s) 612
SnaBI TACGTA 1 cut(s) 526
SpeI ACTAGT 1 cut(s) 17
Sse9I AATT 6 cut(s) 39, 275, 371, 676, 764, 942
SsiI CCGC 2 cut(s) 950, 1271
SspMI CTAG 8 cut(s) 18, 80, 308, 468, 870, 1065, 1071, 1163
SstI GAGCTC 1 cut(s) 428
StyD4I CCNGG 2 cut(s) 285, 958
StyI CCWWGG 4 cut(s) 219, 737, 1023, 1296
TaaI ACNGT 2 cut(s) 917, 1261
TaiI ACGT 3 cut(s) 528, 1239, 1253
TaqI TCGA 7 cut(s) 585, 612, 684, 710, 1116, 1121, 1306
TasI AATT 6 cut(s) 39, 275, 371, 676, 764, 942
TauI GCSGC 1 cut(s) 953
TfiI GAWTC 2 cut(s) 471, 1118
Tru1I TTAA 2 cut(s) 59, 1254
Tru9I TTAA 2 cut(s) 59, 1254
TscAI CASTG 2 cut(s) 922, 943
TseFI GTSAC 1 cut(s) 214
TseI GCWGC 1 cut(s) 637
Tsp45I GTSAC 1 cut(s) 214
TspDTI ATGAA 6 cut(s) 417, 465, 527, 653, 1185, 1203
TspGWI ACGGA 2 cut(s) 685, 734
TspRI CASTG 2 cut(s) 922, 943
Tth111I GACNNNGTC 1 cut(s) 599
Van91I CCANNNNNTGG 1 cut(s) 1048
XapI RAATTY 3 cut(s) 39, 275, 942
XbaI TCTAGA 1 cut(s) 869
XcmI CCANNNNNNNNNTGG 1 cut(s) 998
XmiI GTMKAC 1 cut(s) 1054
XspI CTAG 8 cut(s) 18, 80, 308, 468, 870, 1065, 1071, 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.