Rroxscaffold_7G00205780

Chromosome-associated kinesin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000316
Physical Location & Seq
Reverse (-)
55423900 .. 55428709
4810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00205780.1

Sequence Viewer

Length: 1434 bp
ATGGACTCCGACGAACCGTACAATGTGGCTTCCGACGAAGACTTTCTTGTCCGGTCAACTAGCACCCCGGCGAATTCCGATCTCGAGGGCTTGGCGACCGGCGCGTGGTCCAGGAACGACGACGAATCCGAAACGGTGAACGACGTCGCCGAGATGTTGTGGGGATACGTGTCCCAACGGACGGTCGCGATAGAGGACGTGGACGCTGACGTGGCGGTCAGAGTCGAAGAGCTGGACGACATTACACGACATGTCGTTGCTGGGCAAAAGCTTTCTCCATCAGCTGAGGCAAGGGGCACACTCAGGGTTGGTGCTGGTGCTTCTAGCAGGCTCTATGAACAAGACGCACTCAGGGTTCAAATTCAAACGCAATGGAAGATGAAACTAGAATCTGGGCAGTTCCGATTGCAGAAAGGTTTGTTGGGCAAGCAACTTCTTCAGGTTTTGCATAGAAAGACTGAAGAAGCATCTGTGGCTACTAAACAGCAGAGATGGCTCTTAGAATCTCACAAGGCTTTGTTGCTAAAAAGAGGTGGCAAAAATGGGAATAATACAGCAACTCAGCTGATGCAGGAAATTGACCATGAGACTGAAGTCACAGAGCAGTTGAATGAGCCATGTGGTGTATATGAACATCAAGTAGAAGAGATGGCTGAGGAGGCTGAAAAGCTTAAAGATGAAGTAGAGGCACTGCAACAAGAAATGTCAAGGTGCTCATGCCAGGAGAAAGAGGTTGACAGCTTCGAGAAGGATTTAGATATAACAGACCTGTCTGACCTGAAGGCTCAAGTAGTCAGCGTCAGTAGTATGGTTGAACAATTAAGATTGCACAAGGCTGAGCTAGATCATGGGAAGTCGCAGGTCGTTAGGAGTCAGCATACTGCATCTGTTGGGAGTAGTTACAAGTTAGTGGATGACATCAGTCCATCTGCATCAGAAAATTCCACAGTTGTAACATCTGAAACTGCATCTCCAGTTTGCTGCTCATATAGTAAGAATTTTTTGTGCAAGACGATGAAATGCAAATGTCGATCCAAGGGTGGAAGCTGTGGTGCCTCATGTGGCTGTGCAGTATCTAAGTGCAGCAATAGGAAAGCAGTCCCAATCAAGTCGAGTGACTCGCCACTATCAGAGATTTCTAACGGCGTTCTGAATAGTTCAAACACCAGTGAAACAGTGAAGAGTAGCATAGAGGCTTCCGAAGGTGCAATGCTACTTCAGAGTACACTAGTTCAGAAGGCTGCTGAACCAGAGGGAAACTTTGGAGCAAGAAAGAAACCCTTGACTGAAATTTGGAACATATTGGTGAGTACAAATGCTGCAAAACCTGGCCCACAAAAGAGGGAGAAAGCCAGCGATTCAGCTTGTTACTGTAGACCCAATTTCCTCAGTGCCAGTAAATATGGAAGGCGTAAAGGAAGCAGAAGGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

477

Amino Acids

52.24

Weight (kDa)

5.62

Isoelectric Point (pI)

50.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000316)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G33300
fragaria_vesca FvH4_3g26472 FvH4_5g30650 FvH4_5g30650 FvH4_5g30650 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250
malus_domestica MD08G1198100.v1.1 MD08G1222000.v1.1 MD15G1385400.v1.1 MD15G1440800.v1.1
prunus_persica Prupe.1G532100_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1
pyrus_communis pycom08g17030 pycom08g17040 pycom08g19270 pycom08g19280 pycom15g34550 pycom15g36860 pycom15g38860
rosa_chinensis RchiOBHm_Chr6g0258571 RchiOBHm_Chr6g0258581 RchiOBHm_Chr6g0258621 RchiOBHm_Chr7g0225511 RchiOBHm_Chr7g0230561 RchiOBHm_Chr7g0230571 RchiOBHm_Chr7g0236371 RchiOBHm_Chr7g0236391
rosa_laevigata RLG00000001080 RLG00000001810 RLG00000014605
rosa_multiflora Rmu_co8399019.1_g000001 Rmu_sc0002222.1_g000016 Rmu_sc0002449.1_g000032 Rmu_sc0003720.1_g000005 Rmu_sc0005578.1_g000003 Rmu_sc0011035.1_g000002 Rmu_sc0012681.1_g000001 Rmu_sc0023362.1_g000001 Rmu_sc0023858.1_g000001 Rmu_sc0029314.1_g000001
rosa_roxburghii Rroxscaffold_178G00437500 Rroxscaffold_178G00437540 Rroxscaffold_3G00225100 Rroxscaffold_3G00225110 Rroxscaffold_3G00225140 Rroxscaffold_3G00225170 Rroxscaffold_3G00225190 Rroxscaffold_3G00229880 Rroxscaffold_3G00233730 Rroxscaffold_7G00205760 Rroxscaffold_7G00205780 Rroxscaffold_7G00205820 Rroxscaffold_7G00205860
rosa_rugosa Rorug03G0221800 Rorug03G0270500 Rorug05G0313300 Rorug05G0582400 Rorug05G0582500 Rorug07G0230200.1 Rorug07G0230300 Rorug07G0230400 Rorug07G0295100 Rorug07G0296900
rosa_samantha Rh6AG098800 Rh6AG098900 Rh6AG184000 Rh6BG090700 Rh6BG090900 Rh6CG087500 Rh6CG087600 Rh6DG081800 Rh6DG082000 Rh7AG373100 Rh7AG412900 Rh7AG413000 Rh7AG451100 Rh7AG451200 Rh7BG364900 Rh7BG422800 Rh7BG422900 Rh7CG391400 Rh7CG431300 Rh7CG431400 Rh7CG469300 Rh7CG470800 Rh7CG471300 Rh7CG471400 Rh7DG367900 Rh7DG368000 Rh7DG375800 Rh7DG408800 Rh7DG440500 Rh7DG440600
rosa_wichuraiana Rw0G007810 Rw6G008570 Rw6G008580 Rw7G031720 Rw7G034090 Rw7G037500 Rw7G037510 Rw7G037580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 47, 215
AatII GACGTC 1 cut(s) 147
Acc36I ACCTGC 1 cut(s) 850
AccB1I GGYRCC 1 cut(s) 1052
AccI GTMKAC 1 cut(s) 1375
AccII CGCG 2 cut(s) 104, 188
AciI CCGC 1 cut(s) 215
AclWI GGATC 1 cut(s) 1026
AcsI RAATTY 5 cut(s) 73, 360, 940, 997, 1290
AcuI CTGAAG 5 cut(s) 422, 480, 612, 800, 1202
AcyI GRCGYC 1 cut(s) 144
AfaI GTAC 3 cut(s) 20, 1225, 1312
AfiI CCNNNNNNNGG 2 cut(s) 105, 181
AflIII ACRYGT 2 cut(s) 168, 250
AgsI TTSAA 5 cut(s) 359, 365, 610, 815, 1161
AhlI ACTAGT 1 cut(s) 1228
AjiI CACGTC 2 cut(s) 199, 211
AjnI CCWGG 3 cut(s) 110, 720, 1327
AjuI GAANNNNNNNTTGG 2 cut(s) 404, 436
AluBI AGCT 9 cut(s) 232, 271, 284, 565, 670, 741, 841, 1047, 1364
AluI AGCT 9 cut(s) 232, 271, 284, 565, 670, 741, 841, 1047, 1364
Alw21I GWGCWC 1 cut(s) 716
Alw26I GTCTC 1 cut(s) 581
AlwI GGATC 1 cut(s) 1026
Ama87I CYCGRG 1 cut(s) 83
AoxI GGCC 1 cut(s) 1330
ApeKI GCWGC 4 cut(s) 981, 1083, 1241, 1319
ApoI RAATTY 5 cut(s) 73, 360, 940, 997, 1290
Asp700I GAANNNNTTC 1 cut(s) 42
AspLEI GCGC 1 cut(s) 104
AspS9I GGNCC 2 cut(s) 108, 1331
AsuC2I CCSGG 1 cut(s) 68
AsuHPI GGTGA 2 cut(s) 148, 1318
AvaI CYCGRG 1 cut(s) 83
AvaII GGWCC 1 cut(s) 108
BaeGI GKGCMC 1 cut(s) 299
BanI GGYRCC 1 cut(s) 1052
BbsI GAAGAC 1 cut(s) 45
Bbv12I GWGCWC 1 cut(s) 716
BbvCI CCTCAGC 2 cut(s) 285, 654
BbvI GCAGC 4 cut(s) 968, 1095, 1228, 1306
BccI CCATC 4 cut(s) 286, 486, 643, 934
BceAI ACGGC 1 cut(s) 1159
BciT130I CCWGG 3 cut(s) 112, 722, 1329
BciVI GTATCC 1 cut(s) 158
BcnI CCSGG 1 cut(s) 68
BcoDI GTCTC 1 cut(s) 581
BcuI ACTAGT 1 cut(s) 1228
BfaI CTAG 5 cut(s) 60, 324, 386, 842, 1229
BfmI CTRYAG 1 cut(s) 1372
BfuAI ACCTGC 1 cut(s) 850
BfuI GTATCC 1 cut(s) 158
BisI GCNGC 4 cut(s) 982, 1084, 1242, 1320
BlpI GCTNAGC 1 cut(s) 837
BlsI GCNGC 4 cut(s) 983, 1085, 1243, 1321
Bme1390I CCNGG 4 cut(s) 68, 112, 722, 1329
Bme18I GGWCC 1 cut(s) 108
BmeT110I CYCGRG 1 cut(s) 83
BmgBI CACGTC 2 cut(s) 199, 211
BmgT120I GGNCC 2 cut(s) 108, 1331
BmiI GGNNCC 1 cut(s) 1054
BmrFI CCNGG 4 cut(s) 68, 112, 722, 1329
BmsI GCATC 5 cut(s) 476, 558, 893, 941, 977
BoxI GACNNNNGTC 2 cut(s) 593, 921
BpiI GAAGAC 1 cut(s) 45
BpmI CTGGAG 1 cut(s) 957
Bpu10I CCTNAGC 2 cut(s) 285, 654
Bpu1102I GCTNAGC 1 cut(s) 837
BpuEI CTTGAG 1 cut(s) 771
BpuMI CCSGG 1 cut(s) 68
BsaAI YACGTR 1 cut(s) 169
BsaHI GRCGYC 1 cut(s) 144
BsaJI CCNNGG 2 cut(s) 66, 1035
BsaWI WCCGGW 1 cut(s) 51
BsaXI ACNNNNNCTCC 2 cut(s) 955, 985
Bsc4I CCNNNNNNNGG 2 cut(s) 105, 181
Bse118I RCCGGY 1 cut(s) 98
Bse1I ACTGG 3 cut(s) 974, 1167, 1395
Bse3DI GCAATG 2 cut(s) 377, 1215
BseBI CCWGG 3 cut(s) 112, 722, 1329
BseDI CCNNGG 2 cut(s) 66, 1035
BseGI GGATG 1 cut(s) 919
BseLI CCNNNNNNNGG 2 cut(s) 105, 181
BseMI GCAATG 2 cut(s) 377, 1215
BseMII CTCAG 7 cut(s) 276, 316, 364, 575, 645, 828, 1402
BseNI ACTGG 3 cut(s) 974, 1167, 1395
BseRI GAGGAG 1 cut(s) 671
BseSI GKGCMC 1 cut(s) 299
BseXI GCAGC 4 cut(s) 968, 1095, 1228, 1306
BseYI CCCAGC 1 cut(s) 260
BsgI GTGCAG 2 cut(s) 1089, 1102
Bsh1236I CGCG 2 cut(s) 104, 188
Bsh1285I CGRYCG 2 cut(s) 99, 186
BshFI GGCC 1 cut(s) 1332
BshNI GGYRCC 1 cut(s) 1052
BsiEI CGRYCG 2 cut(s) 99, 186
BsiHKAI GWGCWC 1 cut(s) 716
BsiHKCI CYCGRG 1 cut(s) 83
BsiSI CCGG 3 cut(s) 52, 68, 99
BslFI GGGAC 2 cut(s) 157, 1085
BslI CCNNNNNNNGG 2 cut(s) 105, 181
BsmAI GTCTC 1 cut(s) 581
BsmFI GGGAC 2 cut(s) 157, 1085
BsnI GGCC 1 cut(s) 1332
BsoBI CYCGRG 1 cut(s) 83
Bsp1286I GDGCHC 2 cut(s) 299, 716
Bsp143I GATC 3 cut(s) 79, 844, 1031
Bsp1720I GCTNAGC 1 cut(s) 837
Bsp68I TCGCGA 1 cut(s) 188
BspACI CCGC 1 cut(s) 215
BspANI GGCC 1 cut(s) 1332
BspCNI CTCAG 7 cut(s) 277, 315, 363, 574, 646, 829, 1401
BspFNI CGCG 2 cut(s) 104, 188
BspLI GGNNCC 1 cut(s) 1054
BspMI ACCTGC 1 cut(s) 850
BspPI GGATC 1 cut(s) 1026
BspQI GCTCTTC 1 cut(s) 222
BspT107I GGYRCC 1 cut(s) 1052
BsrDI GCAATG 2 cut(s) 377, 1215
BsrFI RCCGGY 1 cut(s) 98
BsrI ACTGG 3 cut(s) 974, 1167, 1395
BssAI RCCGGY 1 cut(s) 98
BssECI CCNNGG 2 cut(s) 66, 1035
BssMI GATC 3 cut(s) 79, 844, 1031
BssNI GRCGYC 1 cut(s) 144
BssT1I CCWWGG 1 cut(s) 1035
Bst2UI CCWGG 3 cut(s) 112, 722, 1329
Bst4CI ACNGT 6 cut(s) 18, 136, 184, 949, 1177, 1373
Bst6I CTCTTC 3 cut(s) 222, 639, 1175
BstACI GRCGYC 1 cut(s) 144
BstBAI YACGTR 1 cut(s) 169
BstC8I GCNNGC 3 cut(s) 329, 428, 1354
BstDEI CTNAG 9 cut(s) 285, 302, 350, 499, 561, 654, 837, 1077, 1388
BstF5I GGATG 1 cut(s) 919
BstFNI CGCG 2 cut(s) 104, 188
BstHHI GCGC 1 cut(s) 104
BstKTI GATC 3 cut(s) 82, 847, 1034
BstMAI GTCTC 1 cut(s) 581
BstMBI GATC 3 cut(s) 79, 844, 1031
BstMCI CGRYCG 2 cut(s) 99, 186
BstMWI GCNNNNNNNGC 5 cut(s) 101, 212, 473, 493, 659
BstNI CCWGG 3 cut(s) 112, 722, 1329
BstNSI RCATGY 1 cut(s) 254
BstPAI GACNNNNGTC 2 cut(s) 593, 921
BstSCI CCNGG 4 cut(s) 66, 110, 720, 1327
BstSFI CTRYAG 1 cut(s) 1372
BstSLI GKGCMC 1 cut(s) 299
BstUI CGCG 2 cut(s) 104, 188
BstV1I GCAGC 4 cut(s) 968, 1095, 1228, 1306
BstV2I GAAGAC 1 cut(s) 45
BsuI GTATCC 1 cut(s) 158
BsuRI GGCC 1 cut(s) 1332
BtrI CACGTC 2 cut(s) 199, 211
BtsCI GGATG 1 cut(s) 919
BtsI GCAGTG 1 cut(s) 689
BtsIMutI CAGTG 4 cut(s) 689, 1174, 1182, 1396
BtuMI TCGCGA 1 cut(s) 188
BveI ACCTGC 1 cut(s) 850
Cac8I GCNNGC 3 cut(s) 329, 428, 1354
CfoI GCGC 1 cut(s) 104
Cfr10I RCCGGY 1 cut(s) 98
Cfr13I GGNCC 2 cut(s) 108, 1331
CseI GACGC 3 cut(s) 212, 353, 787
Csp6I GTAC 3 cut(s) 19, 1224, 1311
CviAII CATG 6 cut(s) 251, 584, 618, 717, 848, 1059
CviQI GTAC 3 cut(s) 19, 1224, 1311
DdeI CTNAG 9 cut(s) 285, 302, 350, 499, 561, 654, 837, 1077, 1388
DpnI GATC 3 cut(s) 81, 846, 1033
DpnII GATC 3 cut(s) 79, 844, 1031
DrdI GACNNNNNNGTC 2 cut(s) 47, 215
DseDI GACNNNNNNGTC 2 cut(s) 47, 215
Eam1104I CTCTTC 3 cut(s) 222, 639, 1175
EarI CTCTTC 3 cut(s) 222, 639, 1175
Eco130I CCWWGG 1 cut(s) 1035
Eco47I GGWCC 1 cut(s) 108
Eco57I CTGAAG 5 cut(s) 422, 480, 612, 800, 1202
Eco88I CYCGRG 1 cut(s) 83
EcoRI GAATTC 1 cut(s) 73
EcoRII CCWGG 3 cut(s) 110, 720, 1327
EcoT14I CCWWGG 1 cut(s) 1035
ErhI CCWWGG 1 cut(s) 1035
FaeI CATG 6 cut(s) 254, 587, 621, 720, 851, 1062
FalI AAGNNNNNCTT 4 cut(s) 30, 62, 1265, 1297
FaqI GGGAC 2 cut(s) 157, 1085
FatI CATG 6 cut(s) 250, 583, 617, 716, 847, 1058
FblI GTMKAC 1 cut(s) 1375
Fnu4HI GCNGC 4 cut(s) 982, 1084, 1242, 1320
FokI GGATG 1 cut(s) 926
Fsp4HI GCNGC 4 cut(s) 982, 1084, 1242, 1320
FspBI CTAG 5 cut(s) 60, 324, 386, 842, 1229
GlaI GCGC 1 cut(s) 103
GluI GCNGC 4 cut(s) 982, 1084, 1242, 1320
GsaI CCCAGC 1 cut(s) 264
GsuI CTGGAG 1 cut(s) 957
HaeIII GGCC 1 cut(s) 1332
HapII CCGG 3 cut(s) 52, 68, 99
HgaI GACGC 3 cut(s) 212, 353, 787
HhaI GCGC 1 cut(s) 104
Hin1I GRCGYC 1 cut(s) 144
Hin1II CATG 6 cut(s) 254, 587, 621, 720, 851, 1062
Hin6I GCGC 1 cut(s) 102
HinP1I GCGC 1 cut(s) 102
HincII GTYRAC 2 cut(s) 57, 736
HindII GTYRAC 2 cut(s) 57, 736
HindIII AAGCTT 2 cut(s) 269, 668
HinfI GANTC 8 cut(s) 5, 125, 222, 389, 503, 871, 1118, 1358
HpaII CCGG 3 cut(s) 52, 68, 99
HphI GGTGA 2 cut(s) 148, 1318
Hpy166II GTNNAC 6 cut(s) 57, 139, 202, 736, 1226, 1376
Hpy188III TCNNGA 3 cut(s) 83, 187, 745
Hpy8I GTNNAC 6 cut(s) 57, 139, 202, 736, 1226, 1376
Hpy99I CGWCG 6 cut(s) 14, 38, 122, 125, 146, 149
HpyAV CCTTC 6 cut(s) 742, 775, 1196, 1231, 1401, 1419
HpyCH4III ACNGT 6 cut(s) 18, 136, 184, 949, 1177, 1373
HpyCH4IV ACGT 4 cut(s) 144, 168, 198, 210
HpyF10VI GCNNNNNNNGC 5 cut(s) 101, 212, 473, 493, 659
HpyF3I CTNAG 9 cut(s) 285, 302, 350, 499, 561, 654, 837, 1077, 1388
HpySE526I ACGT 4 cut(s) 144, 168, 198, 210
Hsp92I GRCGYC 1 cut(s) 144
Hsp92II CATG 6 cut(s) 254, 587, 621, 720, 851, 1062
HspAI GCGC 1 cut(s) 102
Kzo9I GATC 3 cut(s) 79, 844, 1031
LguI GCTCTTC 1 cut(s) 222
LmnI GCTCC 1 cut(s) 1265
Lsp1109I GCAGC 4 cut(s) 968, 1095, 1228, 1306
LweI GCATC 5 cut(s) 476, 558, 893, 941, 977
MaeI CTAG 5 cut(s) 60, 324, 386, 842, 1229
MaeII ACGT 4 cut(s) 144, 168, 198, 210
MaeIII GTNAC 5 cut(s) 595, 899, 952, 1115, 1367
MalI GATC 3 cut(s) 81, 846, 1033
MboI GATC 3 cut(s) 79, 844, 1031
MboII GAAGA 7 cut(s) 50, 239, 388, 428, 473, 656, 1192
MhlI GDGCHC 2 cut(s) 299, 716
MluCI AATT 8 cut(s) 73, 360, 576, 818, 940, 997, 1290, 1381
MlyI GAGTC 3 cut(s) 231, 880, 1112
MmeI TCCRAC 2 cut(s) 33, 57
MroXI GAANNNNTTC 1 cut(s) 42
MseI TTAA 2 cut(s) 672, 821
MslI CAYNNNNRTG 1 cut(s) 1304
MspA1I CMGCKG 2 cut(s) 284, 565
MspI CCGG 3 cut(s) 52, 68, 99
MspR9I CCNGG 4 cut(s) 68, 112, 722, 1329
MvaI CCWGG 3 cut(s) 112, 722, 1329
MvnI CGCG 2 cut(s) 104, 188
MwoI GCNNNNNNNGC 5 cut(s) 101, 212, 473, 493, 659
NciI CCSGG 1 cut(s) 68
NdeII GATC 3 cut(s) 79, 844, 1031
NlaIII CATG 6 cut(s) 254, 587, 621, 720, 851, 1062
NlaIV GGNNCC 1 cut(s) 1054
NmeAIII GCCGAG 1 cut(s) 175
NmuCI GTSAC 2 cut(s) 595, 1115
NruI TCGCGA 1 cut(s) 188
NspI RCATGY 1 cut(s) 254
PaeR7I CTCGAG 1 cut(s) 83
PciI ACATGT 1 cut(s) 250
PciSI GCTCTTC 1 cut(s) 222
PcsI WCGNNNNNNNCGW 2 cut(s) 126, 147
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 4 cut(s) 125, 389, 503, 1358
PfoI TCCNGGA 1 cut(s) 110
PkrI GCNGC 4 cut(s) 983, 1085, 1243, 1321
PleI GAGTC 3 cut(s) 230, 879, 1112
PpsI GAGTC 3 cut(s) 230, 879, 1112
Ppu21I YACGTR 1 cut(s) 169
PscI ACATGT 1 cut(s) 250
PshAI GACNNNNGTC 2 cut(s) 593, 921
Psp6I CCWGG 3 cut(s) 110, 720, 1327
PspFI CCCAGC 1 cut(s) 260
PspGI CCWGG 3 cut(s) 110, 720, 1327
PspN4I GGNNCC 1 cut(s) 1054
PspPI GGNCC 2 cut(s) 108, 1331
PvuII CAGCTG 2 cut(s) 284, 565
RruI TCGCGA 1 cut(s) 188
RsaI GTAC 3 cut(s) 20, 1225, 1312
RsaNI GTAC 3 cut(s) 19, 1224, 1311
RseI CAYNNNNRTG 1 cut(s) 1304
SapI GCTCTTC 1 cut(s) 222
SaqAI TTAA 2 cut(s) 672, 821
SatI GCNGC 4 cut(s) 982, 1084, 1242, 1320
Sau3AI GATC 3 cut(s) 79, 844, 1031
Sau96I GGNCC 2 cut(s) 108, 1331
SchI GAGTC 3 cut(s) 231, 880, 1112
ScrFI CCNGG 4 cut(s) 68, 112, 722, 1329
SduI GDGCHC 2 cut(s) 299, 716
SfaNI GCATC 5 cut(s) 476, 558, 893, 941, 977
SfcI CTRYAG 1 cut(s) 1372
Sfr274I CTCGAG 1 cut(s) 83
SinI GGWCC 1 cut(s) 108
SlaI CTCGAG 1 cut(s) 83
SmiMI CAYNNNNRTG 1 cut(s) 1304
SmlI CTYRAG 2 cut(s) 83, 786
SmoI CTYRAG 2 cut(s) 83, 786
SpeI ACTAGT 1 cut(s) 1228
Sse9I AATT 8 cut(s) 73, 360, 576, 818, 940, 997, 1290, 1381
SsiI CCGC 1 cut(s) 215
SspMI CTAG 5 cut(s) 60, 324, 386, 842, 1229
StyD4I CCNGG 4 cut(s) 66, 110, 720, 1327
StyI CCWWGG 1 cut(s) 1035
TaaI ACNGT 6 cut(s) 18, 136, 184, 949, 1177, 1373
TaiI ACGT 4 cut(s) 147, 171, 201, 213
TaqI TCGA 5 cut(s) 84, 225, 744, 1030, 1112
TasI AATT 8 cut(s) 73, 360, 576, 818, 940, 997, 1290, 1381
TatI WGTACW 2 cut(s) 1223, 1310
TfiI GAWTC 4 cut(s) 125, 389, 503, 1358
Tru1I TTAA 2 cut(s) 672, 821
Tru9I TTAA 2 cut(s) 672, 821
TscAI CASTG 4 cut(s) 696, 1174, 1182, 1396
TseFI GTSAC 2 cut(s) 595, 1115
TseI GCWGC 4 cut(s) 981, 1083, 1241, 1319
Tsp45I GTSAC 2 cut(s) 595, 1115
TspDTI ATGAA 5 cut(s) 351, 395, 645, 693, 1031
TspGWI ACGGA 1 cut(s) 193
TspRI CASTG 4 cut(s) 696, 1174, 1182, 1396
VpaK11BI GGWCC 1 cut(s) 108
XapI RAATTY 5 cut(s) 73, 360, 940, 997, 1290
XceI RCATGY 1 cut(s) 254
XhoI CTCGAG 1 cut(s) 83
XmiI GTMKAC 1 cut(s) 1375
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 5 cut(s) 60, 324, 386, 842, 1229
ZraI GACGTC 1 cut(s) 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.