Rroxscaffold_178G00437500

Chromosome-associated kinesin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000178
OG0000316
Physical Location & Seq
Reverse (-)
234283 .. 238883
4601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_178G00437500.1

Sequence Viewer

Length: 1275 bp
ATGGACTCCGACGAACCGTACAATGTGGCTTCCGACGAAGACTTTCTTGGCTTTGGCGACGTCCGGTCAACTAGCACCGCGGCGAATTCCGATCTCGAGGGCTTGGCGACCGGCGCGTGGTCCAGGAACGACGACGAATCCGAAACGGTGAAACAGGGGACAAGCGACGTCGCCGAGATGTTGTGGCGATACGTGTCCCAACGGACGGTCGCGATTGAGGACGTGGACGCTGACGTGGCGTCCATGGGGGCACACTCAGGGTTGGCGCTGCTGCTTCTAGCAGGCTCTATAGGCTTCACTGGATTCACTGGATTCCTTTCGAGCCACGCCTATGAACAAGACGCACTCACGGTTTTGCACAGCAAGACTGAAGAAGCATCTGTGGCTACTAAACAGCTGAGGCGGCTCTTAGAATCTCGCAAGGCTCTGTTGCTAAAAAGAGGTGGCAAAAATGGGAATAATACAGCAACTCAGCTGATGCAGGAAATTGATCATGAGGCTGAAGTCACAGAGCAGTTGAATGAGCTATGTGCTGTATATGAACGTCAAATAGAAGAGATGGCTGAGGAGGCTGAAAAGCTTAAAGATGAACTAGAGGCACTACAACAAGAAAAGTCAAGGTGCTCATGCCAGGAGAAAGAGGTTGACAGCTTTGAGAAGGATTCAGATATAACAGACCTGTCTGACCTGAAGGCTCAAGTAGTCAGCGTCAGTAGTATGGTTGAACAATTAAGATTGCACAAGGCTGAGCTTGATCATGGGAAGTCGCAGGACGTTAGGAGTCAGCATACCACATCTGTTGGGAGTAGTTACAAGTTAGTGGAGGACATCAGTCCATCTGCATCAGAAAATTCCACAGTTGCCACATCTAAAACTGCATCTCCAGTTTGCTGCTCATATAGTGAGAATTCTTTGTGCAAGACGATGAATCGCAAATGTCGATCCAAGGGTGGAAGCTGTGGTGCCTCATGTGGCTGTGCAGTATCTAAGTGCAGCAATAGGAAAGCAATCCCAATCAAGTCGAGTGACTCGCCACCATCAGAGATTTCTAATGGCGTTCTGAATAGTTCAAACACCAGTGAAACAGTGAAGAGTAGCATAGAGGGTTCTGAAGGTGCAATGCTACTTCAGAGTACACTAGTTCAGAAGGCTGCTGAACAAGAAGGGAACTTTGGAGCAAGAAAGAAACCCTTGACTGAAATTGGGAACGTATTGGAGAGTACAAATGGCCCACAAAAAAAGGGAGAAAGCCAGCGATTCAGCTCCTTACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

424

Amino Acids

45.67

Weight (kDa)

4.88

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000316)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G33300
fragaria_vesca FvH4_3g26472 FvH4_5g30650 FvH4_5g30650 FvH4_5g30650 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35240 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250 FvH4_5g35250
malus_domestica MD08G1198100.v1.1 MD08G1222000.v1.1 MD15G1385400.v1.1 MD15G1440800.v1.1
prunus_persica Prupe.1G532100_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1 Prupe.1G559800_v2.0.a1
pyrus_communis pycom08g17030 pycom08g17040 pycom08g19270 pycom08g19280 pycom15g34550 pycom15g36860 pycom15g38860
rosa_chinensis RchiOBHm_Chr6g0258571 RchiOBHm_Chr6g0258581 RchiOBHm_Chr6g0258621 RchiOBHm_Chr7g0225511 RchiOBHm_Chr7g0230561 RchiOBHm_Chr7g0230571 RchiOBHm_Chr7g0236371 RchiOBHm_Chr7g0236391
rosa_laevigata RLG00000001080 RLG00000001810 RLG00000014605
rosa_multiflora Rmu_co8399019.1_g000001 Rmu_sc0002222.1_g000016 Rmu_sc0002449.1_g000032 Rmu_sc0003720.1_g000005 Rmu_sc0005578.1_g000003 Rmu_sc0011035.1_g000002 Rmu_sc0012681.1_g000001 Rmu_sc0023362.1_g000001 Rmu_sc0023858.1_g000001 Rmu_sc0029314.1_g000001
rosa_roxburghii Rroxscaffold_178G00437500 Rroxscaffold_178G00437540 Rroxscaffold_3G00225100 Rroxscaffold_3G00225110 Rroxscaffold_3G00225140 Rroxscaffold_3G00225170 Rroxscaffold_3G00225190 Rroxscaffold_3G00229880 Rroxscaffold_3G00233730 Rroxscaffold_7G00205760 Rroxscaffold_7G00205780 Rroxscaffold_7G00205820 Rroxscaffold_7G00205860
rosa_rugosa Rorug03G0221800 Rorug03G0270500 Rorug05G0313300 Rorug05G0582400 Rorug05G0582500 Rorug07G0230200.1 Rorug07G0230300 Rorug07G0230400 Rorug07G0295100 Rorug07G0296900
rosa_samantha Rh6AG098800 Rh6AG098900 Rh6AG184000 Rh6BG090700 Rh6BG090900 Rh6CG087500 Rh6CG087600 Rh6DG081800 Rh6DG082000 Rh7AG373100 Rh7AG412900 Rh7AG413000 Rh7AG451100 Rh7AG451200 Rh7BG364900 Rh7BG422800 Rh7BG422900 Rh7CG391400 Rh7CG431300 Rh7CG431400 Rh7CG469300 Rh7CG470800 Rh7CG471300 Rh7CG471400 Rh7DG367900 Rh7DG368000 Rh7DG375800 Rh7DG408800 Rh7DG440500 Rh7DG440600
rosa_wichuraiana Rw0G007810 Rw6G008570 Rw6G008580 Rw7G031720 Rw7G034090 Rw7G037500 Rw7G037510 Rw7G037580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 63, 171
AccB1I GGYRCC 1 cut(s) 962
AccII CGCG 3 cut(s) 80, 116, 212
AciI CCGC 3 cut(s) 78, 80, 403
AclWI GGATC 1 cut(s) 936
AcsI RAATTY 3 cut(s) 85, 850, 907
AcuI CTGAAG 5 cut(s) 390, 522, 710, 1112, 1131
AcyI GRCGYC 3 cut(s) 60, 168, 239
AfaI GTAC 3 cut(s) 20, 1135, 1222
AfiI CCNNNNNNNGG 2 cut(s) 117, 205
AflIII ACRYGT 1 cut(s) 192
AgsI TTSAA 3 cut(s) 520, 725, 1071
AhdI GACNNNNNGTC 2 cut(s) 64, 238
AhlI ACTAGT 1 cut(s) 1138
AjiI CACGTC 2 cut(s) 223, 235
AjnI CCWGG 2 cut(s) 122, 630
AjuI GAANNNNNNNTTGG 4 cut(s) 30, 62, 1155, 1187
AluBI AGCT 8 cut(s) 397, 475, 526, 580, 651, 751, 957, 1263
AluI AGCT 8 cut(s) 397, 475, 526, 580, 651, 751, 957, 1263
Alw21I GWGCWC 1 cut(s) 626
AlwI GGATC 1 cut(s) 936
Ama87I CYCGRG 1 cut(s) 95
AoxI GGCC 1 cut(s) 1228
ApeKI GCWGC 5 cut(s) 268, 271, 891, 993, 1151
ApoI RAATTY 3 cut(s) 85, 850, 907
Asp700I GAANNNNTTC 1 cut(s) 42
AspLEI GCGC 2 cut(s) 116, 268
AspS9I GGNCC 2 cut(s) 120, 1229
AsuHPI GGTGA 1 cut(s) 160
AvaI CYCGRG 1 cut(s) 95
AvaII GGWCC 1 cut(s) 120
BaeGI GKGCMC 1 cut(s) 253
BanI GGYRCC 1 cut(s) 962
BbsI GAAGAC 1 cut(s) 45
Bbv12I GWGCWC 1 cut(s) 626
BbvCI CCTCAGC 2 cut(s) 398, 564
BbvI GCAGC 5 cut(s) 255, 258, 878, 1005, 1138
BccI CCATC 3 cut(s) 553, 844, 1045
BciT130I CCWGG 2 cut(s) 124, 632
BclI TGATCA 2 cut(s) 490, 754
BcuI ACTAGT 1 cut(s) 1138
BfaI CTAG 4 cut(s) 72, 278, 593, 1139
BfmI CTRYAG 2 cut(s) 288, 1271
BfoI RGCGCY 1 cut(s) 269
BisI GCNGC 7 cut(s) 81, 269, 272, 404, 892, 994, 1152
BlpI GCTNAGC 1 cut(s) 747
BlsI GCNGC 7 cut(s) 82, 270, 273, 405, 893, 995, 1153
Bme1390I CCNGG 2 cut(s) 124, 632
Bme18I GGWCC 1 cut(s) 120
BmeRI GACNNNNNGTC 2 cut(s) 64, 238
BmeT110I CYCGRG 1 cut(s) 95
BmgBI CACGTC 2 cut(s) 223, 235
BmgT120I GGNCC 2 cut(s) 120, 1229
BmiI GGNNCC 1 cut(s) 964
BmrFI CCNGG 2 cut(s) 124, 632
BmsI GCATC 4 cut(s) 386, 468, 851, 887
BoxI GACNNNNGTC 1 cut(s) 831
BpiI GAAGAC 1 cut(s) 45
BpmI CTGGAG 1 cut(s) 867
Bpu10I CCTNAGC 2 cut(s) 398, 564
Bpu1102I GCTNAGC 1 cut(s) 747
BpuEI CTTGAG 1 cut(s) 681
BsaAI YACGTR 1 cut(s) 193
BsaHI GRCGYC 3 cut(s) 60, 168, 239
BsaJI CCNNGG 3 cut(s) 78, 243, 945
BsaWI WCCGGW 1 cut(s) 63
BsaXI ACNNNNNCTCC 2 cut(s) 865, 895
Bsc4I CCNNNNNNNGG 2 cut(s) 117, 205
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 4 cut(s) 304, 313, 884, 1077
Bse3DI GCAATG 1 cut(s) 1125
BseBI CCWGG 2 cut(s) 124, 632
BseDI CCNNGG 3 cut(s) 78, 243, 945
BseLI CCNNNNNNNGG 2 cut(s) 117, 205
BseMI GCAATG 1 cut(s) 1125
BseMII CTCAG 5 cut(s) 270, 389, 485, 555, 738
BseNI ACTGG 4 cut(s) 304, 313, 884, 1077
BseRI GAGGAG 1 cut(s) 581
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 5 cut(s) 255, 258, 878, 1005, 1138
BsgI GTGCAG 2 cut(s) 999, 1012
Bsh1236I CGCG 3 cut(s) 80, 116, 212
Bsh1285I CGRYCG 2 cut(s) 111, 210
BshFI GGCC 1 cut(s) 1230
BshNI GGYRCC 1 cut(s) 962
BsiEI CGRYCG 2 cut(s) 111, 210
BsiHKAI GWGCWC 1 cut(s) 626
BsiHKCI CYCGRG 1 cut(s) 95
BsiSI CCGG 2 cut(s) 64, 111
BslFI GGGAC 2 cut(s) 172, 181
BslI CCNNNNNNNGG 2 cut(s) 117, 205
BsmFI GGGAC 2 cut(s) 172, 181
BsnI GGCC 1 cut(s) 1230
BsoBI CYCGRG 1 cut(s) 95
Bsp1286I GDGCHC 2 cut(s) 253, 626
Bsp143I GATC 4 cut(s) 91, 490, 754, 941
Bsp1720I GCTNAGC 1 cut(s) 747
Bsp19I CCATGG 1 cut(s) 243
Bsp68I TCGCGA 1 cut(s) 212
BspACI CCGC 3 cut(s) 78, 80, 403
BspANI GGCC 1 cut(s) 1230
BspCNI CTCAG 5 cut(s) 269, 390, 484, 556, 739
BspFNI CGCG 3 cut(s) 80, 116, 212
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 1 cut(s) 964
BspPI GGATC 1 cut(s) 936
BspT107I GGYRCC 1 cut(s) 962
BsrDI GCAATG 1 cut(s) 1125
BsrFI RCCGGY 1 cut(s) 110
BsrI ACTGG 4 cut(s) 304, 313, 884, 1077
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 3 cut(s) 78, 243, 945
BssMI GATC 4 cut(s) 91, 490, 754, 941
BssNI GRCGYC 3 cut(s) 60, 168, 239
BssT1I CCWWGG 2 cut(s) 243, 945
Bst2UI CCWGG 2 cut(s) 124, 632
Bst4CI ACNGT 7 cut(s) 18, 148, 208, 352, 859, 1087, 1272
Bst6I CTCTTC 2 cut(s) 549, 1085
BstACI GRCGYC 3 cut(s) 60, 168, 239
BstBAI YACGTR 1 cut(s) 193
BstC8I GCNNGC 2 cut(s) 283, 1253
BstDEI CTNAG 7 cut(s) 256, 398, 409, 471, 564, 747, 987
BstDSI CCRYGG 2 cut(s) 78, 243
BstFNI CGCG 3 cut(s) 80, 116, 212
BstH2I RGCGCY 1 cut(s) 269
BstHHI GCGC 2 cut(s) 116, 268
BstKTI GATC 4 cut(s) 94, 493, 757, 944
BstMBI GATC 4 cut(s) 91, 490, 754, 941
BstMCI CGRYCG 2 cut(s) 111, 210
BstMWI GCNNNNNNNGC 6 cut(s) 113, 236, 291, 383, 403, 569
BstNI CCWGG 2 cut(s) 124, 632
BstPAI GACNNNNGTC 1 cut(s) 831
BstSCI CCNGG 2 cut(s) 122, 630
BstSFI CTRYAG 2 cut(s) 288, 1271
BstSLI GKGCMC 1 cut(s) 253
BstUI CGCG 3 cut(s) 80, 116, 212
BstV1I GCAGC 5 cut(s) 255, 258, 878, 1005, 1138
BstV2I GAAGAC 1 cut(s) 45
BsuRI GGCC 1 cut(s) 1230
BtgI CCRYGG 2 cut(s) 78, 243
BtrI CACGTC 2 cut(s) 223, 235
BtsIMutI CAGTG 4 cut(s) 297, 306, 1084, 1092
BtuMI TCGCGA 1 cut(s) 212
Cac8I GCNNGC 2 cut(s) 283, 1253
CciI TCATGA 1 cut(s) 493
CfoI GCGC 2 cut(s) 116, 268
Cfr10I RCCGGY 1 cut(s) 110
Cfr13I GGNCC 2 cut(s) 120, 1229
Cfr42I CCGCGG 1 cut(s) 81
CseI GACGC 4 cut(s) 228, 236, 350, 697
Csp6I GTAC 3 cut(s) 19, 1134, 1221
CspCI CAANNNNNGTGG 2 cut(s) 781, 816
CviAII CATG 5 cut(s) 244, 494, 627, 758, 969
CviQI GTAC 3 cut(s) 19, 1134, 1221
DdeI CTNAG 7 cut(s) 256, 398, 409, 471, 564, 747, 987
DpnI GATC 4 cut(s) 93, 492, 756, 943
DpnII GATC 4 cut(s) 91, 490, 754, 941
DriI GACNNNNNGTC 2 cut(s) 64, 238
Eam1104I CTCTTC 2 cut(s) 549, 1085
Eam1105I GACNNNNNGTC 2 cut(s) 64, 238
EarI CTCTTC 2 cut(s) 549, 1085
Eco130I CCWWGG 2 cut(s) 243, 945
Eco47I GGWCC 1 cut(s) 120
Eco57I CTGAAG 5 cut(s) 390, 522, 710, 1112, 1131
Eco88I CYCGRG 1 cut(s) 95
EcoRI GAATTC 2 cut(s) 85, 907
EcoRII CCWGG 2 cut(s) 122, 630
EcoT14I CCWWGG 2 cut(s) 243, 945
ErhI CCWWGG 2 cut(s) 243, 945
FaeI CATG 5 cut(s) 247, 497, 630, 761, 972
FalI AAGNNNNNCTT 4 cut(s) 30, 62, 1175, 1207
FaqI GGGAC 2 cut(s) 172, 181
FatI CATG 5 cut(s) 243, 493, 626, 757, 968
FbaI TGATCA 2 cut(s) 490, 754
Fnu4HI GCNGC 7 cut(s) 81, 269, 272, 404, 892, 994, 1152
Fsp4HI GCNGC 7 cut(s) 81, 269, 272, 404, 892, 994, 1152
FspBI CTAG 4 cut(s) 72, 278, 593, 1139
GlaI GCGC 2 cut(s) 115, 267
GluI GCNGC 7 cut(s) 81, 269, 272, 404, 892, 994, 1152
GsuI CTGGAG 1 cut(s) 867
HaeII RGCGCY 1 cut(s) 269
HaeIII GGCC 1 cut(s) 1230
HapII CCGG 2 cut(s) 64, 111
HgaI GACGC 4 cut(s) 228, 236, 350, 697
HhaI GCGC 2 cut(s) 116, 268
Hin1I GRCGYC 3 cut(s) 60, 168, 239
Hin1II CATG 5 cut(s) 247, 497, 630, 761, 972
Hin6I GCGC 2 cut(s) 114, 266
HinP1I GCGC 2 cut(s) 114, 266
HincII GTYRAC 2 cut(s) 69, 646
HindII GTYRAC 2 cut(s) 69, 646
HindIII AAGCTT 1 cut(s) 578
HpaII CCGG 2 cut(s) 64, 111
HphI GGTGA 1 cut(s) 160
Hpy166II GTNNAC 4 cut(s) 69, 226, 646, 1136
Hpy188III TCNNGA 3 cut(s) 95, 211, 494
Hpy8I GTNNAC 4 cut(s) 69, 226, 646, 1136
Hpy99I CGWCG 7 cut(s) 14, 38, 62, 134, 137, 170, 173
HpyAV CCTTC 5 cut(s) 652, 685, 1106, 1141, 1157
HpyCH4III ACNGT 7 cut(s) 18, 148, 208, 352, 859, 1087, 1272
HpyCH4IV ACGT 8 cut(s) 60, 168, 192, 222, 234, 544, 774, 1209
HpyCH4V TGCA 9 cut(s) 358, 481, 739, 842, 878, 918, 980, 993, 1118
HpyF10VI GCNNNNNNNGC 6 cut(s) 113, 236, 291, 383, 403, 569
HpyF3I CTNAG 7 cut(s) 256, 398, 409, 471, 564, 747, 987
HpySE526I ACGT 8 cut(s) 60, 168, 192, 222, 234, 544, 774, 1209
Hsp92I GRCGYC 3 cut(s) 60, 168, 239
Hsp92II CATG 5 cut(s) 247, 497, 630, 761, 972
HspAI GCGC 2 cut(s) 114, 266
Ksp22I TGATCA 2 cut(s) 490, 754
KspI CCGCGG 1 cut(s) 81
Kzo9I GATC 4 cut(s) 91, 490, 754, 941
LmnI GCTCC 2 cut(s) 1175, 1268
Lsp1109I GCAGC 5 cut(s) 255, 258, 878, 1005, 1138
LweI GCATC 4 cut(s) 386, 468, 851, 887
MaeI CTAG 4 cut(s) 72, 278, 593, 1139
MaeII ACGT 8 cut(s) 60, 168, 192, 222, 234, 544, 774, 1209
MaeIII GTNAC 3 cut(s) 505, 809, 1025
MalI GATC 4 cut(s) 93, 492, 756, 943
MboI GATC 4 cut(s) 91, 490, 754, 941
MboII GAAGA 4 cut(s) 50, 383, 566, 1102
MhlI GDGCHC 2 cut(s) 253, 626
MluCI AATT 6 cut(s) 85, 486, 728, 850, 907, 1200
MlyI GAGTC 2 cut(s) 790, 1022
MmeI TCCRAC 2 cut(s) 33, 57
MroXI GAANNNNTTC 1 cut(s) 42
MseI TTAA 2 cut(s) 582, 731
MslI CAYNNNNRTG 1 cut(s) 330
MspA1I CMGCKG 3 cut(s) 80, 397, 475
MspI CCGG 2 cut(s) 64, 111
MspR9I CCNGG 2 cut(s) 124, 632
MvaI CCWGG 2 cut(s) 124, 632
MvnI CGCG 3 cut(s) 80, 116, 212
MwoI GCNNNNNNNGC 6 cut(s) 113, 236, 291, 383, 403, 569
NcoI CCATGG 1 cut(s) 243
NdeII GATC 4 cut(s) 91, 490, 754, 941
NlaIII CATG 5 cut(s) 247, 497, 630, 761, 972
NlaIV GGNNCC 1 cut(s) 964
NmeAIII GCCGAG 1 cut(s) 199
NmuCI GTSAC 2 cut(s) 505, 1025
NruI TCGCGA 1 cut(s) 212
PaeR7I CTCGAG 1 cut(s) 95
PagI TCATGA 1 cut(s) 493
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 937
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 7 cut(s) 137, 303, 312, 413, 662, 928, 1257
PfoI TCCNGGA 1 cut(s) 122
PkrI GCNGC 7 cut(s) 82, 270, 273, 405, 893, 995, 1153
PleI GAGTC 2 cut(s) 789, 1022
PpsI GAGTC 2 cut(s) 789, 1022
Ppu21I YACGTR 1 cut(s) 193
PshAI GACNNNNGTC 1 cut(s) 831
Psp6I CCWGG 2 cut(s) 122, 630
PspGI CCWGG 2 cut(s) 122, 630
PspN4I GGNNCC 1 cut(s) 964
PspPI GGNCC 2 cut(s) 120, 1229
PvuII CAGCTG 2 cut(s) 397, 475
RruI TCGCGA 1 cut(s) 212
RsaI GTAC 3 cut(s) 20, 1135, 1222
RsaNI GTAC 3 cut(s) 19, 1134, 1221
RseI CAYNNNNRTG 1 cut(s) 330
SacII CCGCGG 1 cut(s) 81
SaqAI TTAA 2 cut(s) 582, 731
SatI GCNGC 7 cut(s) 81, 269, 272, 404, 892, 994, 1152
Sau3AI GATC 4 cut(s) 91, 490, 754, 941
Sau96I GGNCC 2 cut(s) 120, 1229
SchI GAGTC 2 cut(s) 790, 1022
ScrFI CCNGG 2 cut(s) 124, 632
SduI GDGCHC 2 cut(s) 253, 626
SfaNI GCATC 4 cut(s) 386, 468, 851, 887
SfcI CTRYAG 2 cut(s) 288, 1271
Sfr274I CTCGAG 1 cut(s) 95
Sfr303I CCGCGG 1 cut(s) 81
SgrBI CCGCGG 1 cut(s) 81
SinI GGWCC 1 cut(s) 120
SlaI CTCGAG 1 cut(s) 95
SmiMI CAYNNNNRTG 1 cut(s) 330
SmlI CTYRAG 2 cut(s) 95, 696
SmoI CTYRAG 2 cut(s) 95, 696
SpeI ACTAGT 1 cut(s) 1138
Sse9I AATT 6 cut(s) 85, 486, 728, 850, 907, 1200
SsiI CCGC 3 cut(s) 78, 80, 403
SspMI CTAG 4 cut(s) 72, 278, 593, 1139
StyD4I CCNGG 2 cut(s) 122, 630
StyI CCWWGG 2 cut(s) 243, 945
TaaI ACNGT 7 cut(s) 18, 148, 208, 352, 859, 1087, 1272
TaiI ACGT 8 cut(s) 63, 171, 195, 225, 237, 547, 777, 1212
TaqI TCGA 4 cut(s) 96, 320, 940, 1022
TasI AATT 6 cut(s) 85, 486, 728, 850, 907, 1200
TatI WGTACW 2 cut(s) 1133, 1220
TauI GCSGC 2 cut(s) 83, 406
TfiI GAWTC 7 cut(s) 137, 303, 312, 413, 662, 928, 1257
Tru1I TTAA 2 cut(s) 582, 731
Tru9I TTAA 2 cut(s) 582, 731
TscAI CASTG 4 cut(s) 304, 313, 1084, 1092
TseFI GTSAC 2 cut(s) 505, 1025
TseI GCWGC 5 cut(s) 268, 271, 891, 993, 1151
Tsp45I GTSAC 2 cut(s) 505, 1025
TspDTI ATGAA 4 cut(s) 348, 555, 603, 941
TspGWI ACGGA 1 cut(s) 217
TspRI CASTG 4 cut(s) 304, 313, 1084, 1092
VpaK11BI GGWCC 1 cut(s) 120
XapI RAATTY 3 cut(s) 85, 850, 907
XhoI CTCGAG 1 cut(s) 95
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 4 cut(s) 72, 278, 593, 1139
ZraI GACGTC 2 cut(s) 61, 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.