zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1965 |
| Acc65I | GGTACC | 1 cut(s) | 434 |
| AccB1I | GGYRCC | 2 cut(s) | 434, 2858 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1588 |
| AccI | GTMKAC | 1 cut(s) | 3183 |
| AciI | CCGC | 2 cut(s) | 63, 1823 |
| AclWI | GGATC | 4 cut(s) | 218, 621, 859, 2832 |
| AcsI | RAATTY | 6 cut(s) | 121, 822, 1058, 1488, 2746, 2803 |
| AcyI | GRCGYC | 1 cut(s) | 137 |
| AfaI | GTAC | 6 cut(s) | 383, 436, 974, 1177, 1368, 3118 |
| AfeI | AGCGCT | 1 cut(s) | 395 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1588, 1848 |
| AgsI | TTSAA | 9 cut(s) | 634, 1631, 1679, 1838, 1867, 2092, 2108, 2425, 2967 |
| AhlI | ACTAGT | 3 cut(s) | 800, 1913, 3034 |
| AjnI | CCWGG | 4 cut(s) | 349, 1068, 2535, 3133 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3051, 3083 |
| Alw21I | GWGCWC | 5 cut(s) | 431, 1211, 1936, 2531, 3034 |
| Alw26I | GTCTC | 2 cut(s) | 1919, 2299 |
| Alw44I | GTGCAC | 1 cut(s) | 3030 |
| AlwI | GGATC | 4 cut(s) | 218, 621, 859, 2832 |
| Aor51HI | AGCGCT | 1 cut(s) | 395 |
| AoxI | GGCC | 1 cut(s) | 3136 |
| ApaLI | GTGCAC | 1 cut(s) | 3030 |
| ApoI | RAATTY | 6 cut(s) | 121, 822, 1058, 1488, 2746, 2803 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2178 |
| Asp718I | GGTACC | 1 cut(s) | 434 |
| AspLEI | GCGC | 1 cut(s) | 396 |
| AspS9I | GGNCC | 2 cut(s) | 114, 3137 |
| AsuHPI | GGTGA | 5 cut(s) | 77, 1418, 1487, 1702, 3124 |
| AsuNHI | GCTAGC | 1 cut(s) | 155 |
| AvaII | GGWCC | 1 cut(s) | 114 |
| BaeGI | GKGCMC | 1 cut(s) | 3034 |
| BanI | GGYRCC | 2 cut(s) | 434, 2858 |
| BanII | GRGCYC | 1 cut(s) | 1211 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1289, 1321 |
| BbsI | GAAGAC | 5 cut(s) | 132, 245, 1079, 1845, 2258 |
| Bbv12I | GWGCWC | 5 cut(s) | 431, 1211, 1936, 2531, 3034 |
| BccI | CCATC | 7 cut(s) | 290, 870, 1419, 1725, 1783, 2458, 2740 |
| BceAI | ACGGC | 3 cut(s) | 2050, 2324, 2787 |
| BciT130I | CCWGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| BciVI | GTATCC | 1 cut(s) | 916 |
| BclI | TGATCA | 3 cut(s) | 1027, 1348, 2650 |
| BcoDI | GTCTC | 2 cut(s) | 1919, 2299 |
| BcuI | ACTAGT | 3 cut(s) | 800, 1913, 3034 |
| BfmI | CTRYAG | 4 cut(s) | 730, 1614, 1958, 3180 |
| BfoI | RGCGCY | 1 cut(s) | 397 |
| BfuAI | ACCTGC | 1 cut(s) | 1965 |
| BfuI | GTATCC | 1 cut(s) | 916 |
| BglII | AGATCT | 2 cut(s) | 304, 1831 |
| BlpI | GCTNAGC | 1 cut(s) | 2643 |
| Bme1390I | CCNGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| Bme18I | GGWCC | 1 cut(s) | 114 |
| BmgT120I | GGNCC | 2 cut(s) | 114, 3137 |
| BmiI | GGNNCC | 3 cut(s) | 436, 1344, 2860 |
| BmrFI | CCNGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| BmsI | GCATC | 9 cut(s) | 186, 1235, 1660, 1794, 2002, 2208, 2291, 2699, 2747 |
| BmtI | GCTAGC | 1 cut(s) | 159 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2727 |
| BpiI | GAAGAC | 5 cut(s) | 132, 245, 1079, 1845, 2258 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1003, 1035, 1408, 1440 |
| BpmI | CTGGAG | 2 cut(s) | 1346, 2763 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2643 |
| BpuEI | CTTGAG | 3 cut(s) | 424, 2171, 2577 |
| BsaHI | GRCGYC | 1 cut(s) | 137 |
| BsaI | GGTCTC | 1 cut(s) | 1919 |
| BsaJI | CCNNGG | 1 cut(s) | 2841 |
| BsaWI | WCCGGW | 3 cut(s) | 1841, 2070, 3055 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2761, 2791 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1588, 1848 |
| Bse1I | ACTGG | 6 cut(s) | 814, 1329, 1929, 2780, 2973, 3203 |
| Bse3DI | GCAATG | 3 cut(s) | 172, 2120, 3021 |
| BseBI | CCWGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| BseDI | CCNNGG | 1 cut(s) | 2841 |
| BseGI | GGATG | 6 cut(s) | 346, 359, 881, 1144, 1736, 2674 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1588, 1848 |
| BseMI | GCAATG | 3 cut(s) | 172, 2120, 3021 |
| BseNI | ACTGG | 6 cut(s) | 814, 1329, 1929, 2780, 2973, 3203 |
| BseRI | GAGGAG | 5 cut(s) | 266, 1330, 1892, 2486, 3004 |
| BseSI | GKGCMC | 1 cut(s) | 3034 |
| BseYI | CCCAGC | 1 cut(s) | 942 |
| BsgI | GTGCAG | 4 cut(s) | 2159, 2405, 2895, 2908 |
| BshFI | GGCC | 1 cut(s) | 3138 |
| BshNI | GGYRCC | 2 cut(s) | 434, 2858 |
| BsiHKAI | GWGCWC | 5 cut(s) | 431, 1211, 1936, 2531, 3034 |
| BsiSI | CCGG | 3 cut(s) | 1842, 2071, 3056 |
| BslFI | GGGAC | 2 cut(s) | 2063, 2891 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1588, 1848 |
| BsmAI | GTCTC | 2 cut(s) | 1919, 2299 |
| BsmBI | CGTCTC | 1 cut(s) | 2299 |
| BsmFI | GGGAC | 2 cut(s) | 2063, 2891 |
| BsmI | GAATGC | 1 cut(s) | 412 |
| BsnI | GGCC | 1 cut(s) | 3138 |
| Bso31I | GGTCTC | 1 cut(s) | 1919 |
| Bsp1286I | GDGCHC | 5 cut(s) | 431, 1211, 1936, 2531, 3034 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2643 |
| BspACI | CCGC | 2 cut(s) | 63, 1823 |
| BspANI | GGCC | 1 cut(s) | 3138 |
| BspHI | TCATGA | 1 cut(s) | 213 |
| BspLI | GGNNCC | 3 cut(s) | 436, 1344, 2860 |
| BspMAI | CTGCAG | 2 cut(s) | 734, 1962 |
| BspMI | ACCTGC | 1 cut(s) | 1965 |
| BspOI | GCTAGC | 1 cut(s) | 159 |
| BspPI | GGATC | 4 cut(s) | 218, 621, 859, 2832 |
| BspT107I | GGYRCC | 2 cut(s) | 434, 2858 |
| BspTNI | GGTCTC | 1 cut(s) | 1919 |
| BsrDI | GCAATG | 3 cut(s) | 172, 2120, 3021 |
| BsrI | ACTGG | 6 cut(s) | 814, 1329, 1929, 2780, 2973, 3203 |
| BssECI | CCNNGG | 1 cut(s) | 2841 |
| BssNI | GRCGYC | 1 cut(s) | 137 |
| BssT1I | CCWWGG | 1 cut(s) | 2841 |
| Bst2UI | CCWGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| Bst4CI | ACNGT | 7 cut(s) | 59, 1618, 1993, 2257, 2755, 2983, 3181 |
| Bst6I | CTCTTC | 9 cut(s) | 196, 707, 1190, 1195, 1557, 1732, 2038, 2454, 2981 |
| BstACI | GRCGYC | 1 cut(s) | 137 |
| BstC8I | GCNNGC | 7 cut(s) | 7, 23, 157, 427, 561, 3048, 3162 |
| BstF5I | GGATG | 6 cut(s) | 346, 359, 881, 1144, 1736, 2674 |
| BstH2I | RGCGCY | 1 cut(s) | 397 |
| BstHHI | GCGC | 1 cut(s) | 396 |
| BstMAI | GTCTC | 2 cut(s) | 1919, 2299 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 15, 288, 556, 2288, 2308, 2793 |
| BstNI | CCWGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| BstNSI | RCATGY | 1 cut(s) | 470 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2727 |
| BstSCI | CCNGG | 4 cut(s) | 349, 1068, 2535, 3133 |
| BstSFI | CTRYAG | 4 cut(s) | 730, 1614, 1958, 3180 |
| BstSLI | GKGCMC | 1 cut(s) | 3034 |
| BstV2I | GAAGAC | 5 cut(s) | 132, 245, 1079, 1845, 2258 |
| BstX2I | RGATCY | 3 cut(s) | 304, 851, 1831 |
| BstYI | RGATCY | 3 cut(s) | 304, 851, 1831 |
| BsuI | GTATCC | 1 cut(s) | 916 |
| BsuRI | GGCC | 1 cut(s) | 3138 |
| BtgZI | GCGATG | 1 cut(s) | 696 |
| BtsCI | GGATG | 6 cut(s) | 346, 359, 881, 1144, 1736, 2674 |
| BtsI | GCAGTG | 1 cut(s) | 2504 |
| BtsIMutI | CAGTG | 7 cut(s) | 807, 1936, 2504, 2614, 2980, 2988, 3204 |
| BveI | ACCTGC | 1 cut(s) | 1965 |
| Cac8I | GCNNGC | 7 cut(s) | 7, 23, 157, 427, 561, 3048, 3162 |
| CciI | TCATGA | 1 cut(s) | 213 |
| CfoI | GCGC | 1 cut(s) | 396 |
| Cfr13I | GGNCC | 2 cut(s) | 114, 3137 |
| CseI | GACGC | 3 cut(s) | 126, 2252, 2868 |
| Csp6I | GTAC | 6 cut(s) | 382, 435, 973, 1176, 1367, 3117 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 311, 346 |
| CviQI | GTAC | 6 cut(s) | 382, 435, 973, 1176, 1367, 3117 |
| DraI | TTTAAA | 1 cut(s) | 708 |
| Eam1104I | CTCTTC | 9 cut(s) | 196, 707, 1190, 1195, 1557, 1732, 2038, 2454, 2981 |
| EarI | CTCTTC | 9 cut(s) | 196, 707, 1190, 1195, 1557, 1732, 2038, 2454, 2981 |
| Ecl136II | GAGCTC | 1 cut(s) | 1209 |
| Eco130I | CCWWGG | 1 cut(s) | 2841 |
| Eco24I | GRGCYC | 1 cut(s) | 1211 |
| Eco31I | GGTCTC | 1 cut(s) | 1919 |
| Eco32I | GATATC | 1 cut(s) | 939 |
| Eco47I | GGWCC | 1 cut(s) | 114 |
| Eco47III | AGCGCT | 1 cut(s) | 395 |
| Eco53kI | GAGCTC | 1 cut(s) | 1209 |
| EcoICRI | GAGCTC | 1 cut(s) | 1209 |
| EcoRI | GAATTC | 1 cut(s) | 2803 |
| EcoRII | CCWGG | 4 cut(s) | 349, 1068, 2535, 3133 |
| EcoRV | GATATC | 1 cut(s) | 939 |
| EcoT14I | CCWWGG | 1 cut(s) | 2841 |
| EcoT22I | ATGCAT | 1 cut(s) | 472 |
| EcoT38I | GRGCYC | 1 cut(s) | 1211 |
| ErhI | CCWWGG | 1 cut(s) | 2841 |
| Esp3I | CGTCTC | 1 cut(s) | 2299 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 317, 349, 512, 544, 1304, 1336, 3071, 3103 |
| FaqI | GGGAC | 2 cut(s) | 2063, 2891 |
| FbaI | TGATCA | 3 cut(s) | 1027, 1348, 2650 |
| FblI | GTMKAC | 1 cut(s) | 3183 |
| FokI | GGATG | 6 cut(s) | 333, 366, 888, 1151, 1743, 2681 |
| FriOI | GRGCYC | 1 cut(s) | 1211 |
| GlaI | GCGC | 1 cut(s) | 395 |
| GsaI | CCCAGC | 1 cut(s) | 946 |
| GsuI | CTGGAG | 2 cut(s) | 1346, 2763 |
| HaeII | RGCGCY | 1 cut(s) | 397 |
| HaeIII | GGCC | 1 cut(s) | 3138 |
| HapII | CCGG | 3 cut(s) | 1842, 2071, 3056 |
| HgaI | GACGC | 3 cut(s) | 126, 2252, 2868 |
| HhaI | GCGC | 1 cut(s) | 396 |
| Hin1I | GRCGYC | 1 cut(s) | 137 |
| Hin6I | GCGC | 1 cut(s) | 394 |
| HinP1I | GCGC | 1 cut(s) | 394 |
| HincII | GTYRAC | 3 cut(s) | 1968, 1998, 2551 |
| HindII | GTYRAC | 3 cut(s) | 1968, 1998, 2551 |
| HindIII | AAGCTT | 4 cut(s) | 1298, 1892, 2157, 2483 |
| HpaII | CCGG | 3 cut(s) | 1842, 2071, 3056 |
| HphI | GGTGA | 5 cut(s) | 77, 1418, 1487, 1702, 3124 |
| Hpy166II | GTNNAC | 7 cut(s) | 464, 1306, 1968, 1998, 2551, 3032, 3184 |
| Hpy188III | TCNNGA | 8 cut(s) | 191, 214, 387, 617, 1559, 1655, 1835, 2188 |
| Hpy8I | GTNNAC | 7 cut(s) | 464, 1306, 1968, 1998, 2551, 3032, 3184 |
| Hpy99I | CGWCG | 1 cut(s) | 2268 |
| HpyCH4III | ACNGT | 7 cut(s) | 59, 1618, 1993, 2257, 2755, 2983, 3181 |
| HpyCH4IV | ACGT | 2 cut(s) | 1587, 2449 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 15, 288, 556, 2288, 2308, 2793 |
| HpySE526I | ACGT | 2 cut(s) | 1587, 2449 |
| Hsp92I | GRCGYC | 1 cut(s) | 137 |
| HspAI | GCGC | 1 cut(s) | 394 |
| KpnI | GGTACC | 1 cut(s) | 438 |
| Ksp22I | TGATCA | 3 cut(s) | 1027, 1348, 2650 |
| LmnI | GCTCC | 8 cut(s) | 1317, 1342, 1786, 1879, 2700, 2782, 2991, 3071 |
| LweI | GCATC | 9 cut(s) | 186, 1235, 1660, 1794, 2002, 2208, 2291, 2699, 2747 |
| MaeII | ACGT | 2 cut(s) | 1587, 2449 |
| MflI | RGATCY | 3 cut(s) | 304, 851, 1831 |
| MhlI | GDGCHC | 5 cut(s) | 431, 1211, 1936, 2531, 3034 |
| MlyI | GAGTC | 5 cut(s) | 599, 1853, 2063, 2686, 2918 |
| MmeI | TCCRAC | 3 cut(s) | 32, 2145, 2737 |
| Mph1103I | ATGCAT | 1 cut(s) | 472 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2178 |
| MslI | CAYNNNNRTG | 3 cut(s) | 182, 417, 3110 |
| MspA1I | CMGCKG | 2 cut(s) | 2302, 2380 |
| MspI | CCGG | 3 cut(s) | 1842, 2071, 3056 |
| MspR9I | CCNGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| Mva1269I | GAATGC | 1 cut(s) | 412 |
| MvaI | CCWGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 15, 288, 556, 2288, 2308, 2793 |
| NheI | GCTAGC | 1 cut(s) | 155 |
| NlaIV | GGNNCC | 3 cut(s) | 436, 1344, 2860 |
| NmuCI | GTSAC | 5 cut(s) | 761, 997, 2410, 2661, 2921 |
| NsiI | ATGCAT | 1 cut(s) | 472 |
| NspI | RCATGY | 1 cut(s) | 470 |
| PagI | TCATGA | 1 cut(s) | 213 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1997 |
| PctI | GAATGC | 1 cut(s) | 412 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2178 |
| PfeI | GAWTC | 9 cut(s) | 266, 735, 1254, 1544, 1838, 2080, 2132, 2318, 3166 |
| PflFI | GACNNNGTC | 1 cut(s) | 784 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1588 |
| PfoI | TCCNGGA | 1 cut(s) | 349 |
| PleI | GAGTC | 5 cut(s) | 599, 1853, 2062, 2685, 2918 |
| PpsI | GAGTC | 5 cut(s) | 599, 1853, 2062, 2685, 2918 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2727 |
| Psp124BI | GAGCTC | 1 cut(s) | 1211 |
| Psp6I | CCWGG | 4 cut(s) | 349, 1068, 2535, 3133 |
| PspFI | CCCAGC | 1 cut(s) | 942 |
| PspGI | CCWGG | 4 cut(s) | 349, 1068, 2535, 3133 |
| PspN4I | GGNNCC | 3 cut(s) | 436, 1344, 2860 |
| PspPI | GGNCC | 2 cut(s) | 114, 3137 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 492, 524 |
| PstI | CTGCAG | 2 cut(s) | 734, 1962 |
| PsuI | RGATCY | 3 cut(s) | 304, 851, 1831 |
| PsyI | GACNNNGTC | 1 cut(s) | 784 |
| PvuII | CAGCTG | 2 cut(s) | 2302, 2380 |
| RsaI | GTAC | 6 cut(s) | 383, 436, 974, 1177, 1368, 3118 |
| RsaNI | GTAC | 6 cut(s) | 382, 435, 973, 1176, 1367, 3117 |
| RseI | CAYNNNNRTG | 3 cut(s) | 182, 417, 3110 |
| SacI | GAGCTC | 1 cut(s) | 1211 |
| Sau96I | GGNCC | 2 cut(s) | 114, 3137 |
| SchI | GAGTC | 5 cut(s) | 599, 1853, 2063, 2686, 2918 |
| ScrFI | CCNGG | 4 cut(s) | 351, 1070, 2537, 3135 |
| SduI | GDGCHC | 5 cut(s) | 431, 1211, 1936, 2531, 3034 |
| SfaNI | GCATC | 9 cut(s) | 186, 1235, 1660, 1794, 2002, 2208, 2291, 2699, 2747 |
| SfcI | CTRYAG | 4 cut(s) | 730, 1614, 1958, 3180 |
| SinI | GGWCC | 1 cut(s) | 114 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 182, 417, 3110 |
| SmlI | CTYRAG | 3 cut(s) | 439, 2186, 2592 |
| SmoI | CTYRAG | 3 cut(s) | 439, 2186, 2592 |
| SpeI | ACTAGT | 3 cut(s) | 800, 1913, 3034 |
| SsiI | CCGC | 2 cut(s) | 63, 1823 |
| SspI | AATATT | 2 cut(s) | 641, 961 |
| SstI | GAGCTC | 1 cut(s) | 1211 |
| StyD4I | CCNGG | 4 cut(s) | 349, 1068, 2535, 3133 |
| StyI | CCWWGG | 1 cut(s) | 2841 |
| TaaI | ACNGT | 7 cut(s) | 59, 1618, 1993, 2257, 2755, 2983, 3181 |
| TaiI | ACGT | 2 cut(s) | 1590, 2452 |
| TaqI | TCGA | 3 cut(s) | 1977, 2266, 2836 |
| TatI | WGTACW | 3 cut(s) | 381, 972, 3116 |
| TfiI | GAWTC | 9 cut(s) | 266, 735, 1254, 1544, 1838, 2080, 2132, 2318, 3166 |
| TscAI | CASTG | 7 cut(s) | 814, 1936, 2511, 2614, 2980, 2988, 3204 |
| TseFI | GTSAC | 5 cut(s) | 761, 997, 2410, 2661, 2921 |
| Tsp45I | GTSAC | 5 cut(s) | 761, 997, 2410, 2661, 2921 |
| TspRI | CASTG | 7 cut(s) | 814, 1936, 2511, 2614, 2980, 2988, 3204 |
| Tth111I | GACNNNGTC | 1 cut(s) | 784 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1588 |
| VneI | GTGCAC | 1 cut(s) | 3030 |
| VpaK11BI | GGWCC | 1 cut(s) | 114 |
| XapI | RAATTY | 6 cut(s) | 121, 822, 1058, 1488, 2746, 2803 |
| XbaI | TCTAGA | 1 cut(s) | 190 |
| XceI | RCATGY | 1 cut(s) | 470 |
| XmiI | GTMKAC | 1 cut(s) | 3183 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2178 |
| Zsp2I | ATGCAT | 1 cut(s) | 472 |