zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 212 |
| AccB1I | GGYRCC | 1 cut(s) | 212 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1366 |
| AccI | GTMKAC | 1 cut(s) | 1631 |
| AclWI | GGATC | 4 cut(s) | 399, 637, 681, 813 |
| AcsI | RAATTY | 3 cut(s) | 600, 836, 1266 |
| AcuI | CTGAAG | 3 cut(s) | 1136, 1175, 1315 |
| AfaI | GTAC | 4 cut(s) | 161, 214, 955, 1146 |
| AfeI | AGCGCT | 1 cut(s) | 173 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1366, 1626 |
| AgsI | TTSAA | 4 cut(s) | 412, 1409, 1457, 1616 |
| AhlI | ACTAGT | 1 cut(s) | 578 |
| AjnI | CCWGG | 2 cut(s) | 127, 846 |
| AluBI | AGCT | 9 cut(s) | 318, 507, 724, 769, 987, 1044, 1078, 1098, 1540 |
| AluI | AGCT | 9 cut(s) | 318, 507, 724, 769, 987, 1044, 1078, 1098, 1540 |
| Alw21I | GWGCWC | 2 cut(s) | 209, 989 |
| AlwI | GGATC | 4 cut(s) | 399, 637, 681, 813 |
| Aor51HI | AGCGCT | 1 cut(s) | 173 |
| ApeKI | GCWGC | 2 cut(s) | 66, 507 |
| ApoI | RAATTY | 3 cut(s) | 600, 836, 1266 |
| Asp718I | GGTACC | 1 cut(s) | 212 |
| AspLEI | GCGC | 1 cut(s) | 174 |
| AsuHPI | GGTGA | 4 cut(s) | 1196, 1265, 1480, 1657 |
| BanI | GGYRCC | 1 cut(s) | 212 |
| BanII | GRGCYC | 1 cut(s) | 989 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1067, 1099 |
| BbsI | GAAGAC | 1 cut(s) | 857 |
| Bbv12I | GWGCWC | 2 cut(s) | 209, 989 |
| BbvCI | CCTCAGC | 1 cut(s) | 1599 |
| BbvI | GCAGC | 2 cut(s) | 53, 494 |
| BccI | CCATC | 4 cut(s) | 68, 648, 1503, 1561 |
| BciT130I | CCWGG | 2 cut(s) | 129, 848 |
| BciVI | GTATCC | 1 cut(s) | 694 |
| BclI | TGATCA | 3 cut(s) | 805, 1126, 1647 |
| BcuI | ACTAGT | 1 cut(s) | 578 |
| BfaI | CTAG | 6 cut(s) | 579, 641, 869, 1029, 1148, 1181 |
| BfmI | CTRYAG | 2 cut(s) | 508, 1392 |
| BfoI | RGCGCY | 1 cut(s) | 175 |
| BfuI | GTATCC | 1 cut(s) | 694 |
| BglII | AGATCT | 2 cut(s) | 82, 1609 |
| BisI | GCNGC | 2 cut(s) | 67, 508 |
| BlsI | GCNGC | 2 cut(s) | 68, 509 |
| Bme1390I | CCNGG | 2 cut(s) | 129, 848 |
| BmiI | GGNNCC | 2 cut(s) | 214, 1122 |
| BmrFI | CCNGG | 2 cut(s) | 129, 848 |
| BmsI | GCATC | 4 cut(s) | 1013, 1061, 1438, 1572 |
| BpiI | GAAGAC | 1 cut(s) | 857 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 781, 813, 1186, 1218 |
| BpmI | CTGGAG | 1 cut(s) | 1124 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1599 |
| BpuEI | CTTGAG | 1 cut(s) | 202 |
| BsaWI | WCCGGW | 1 cut(s) | 1619 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1366, 1626 |
| Bse1I | ACTGG | 2 cut(s) | 592, 1107 |
| Bse3DI | GCAATG | 1 cut(s) | 1593 |
| BseBI | CCWGG | 2 cut(s) | 129, 848 |
| BseGI | GGATG | 5 cut(s) | 124, 137, 659, 922, 1514 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1366, 1626 |
| BseMI | GCAATG | 1 cut(s) | 1593 |
| BseMII | CTCAG | 5 cut(s) | 366, 699, 1056, 1254, 1590 |
| BseNI | ACTGG | 2 cut(s) | 592, 1107 |
| BseRI | GAGGAG | 2 cut(s) | 44, 1108 |
| BseXI | GCAGC | 2 cut(s) | 53, 494 |
| BseYI | CCCAGC | 1 cut(s) | 720 |
| BshNI | GGYRCC | 1 cut(s) | 212 |
| BsiHKAI | GWGCWC | 2 cut(s) | 209, 989 |
| BsiSI | CCGG | 1 cut(s) | 1620 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1366, 1626 |
| BsmI | GAATGC | 1 cut(s) | 190 |
| Bsp1286I | GDGCHC | 2 cut(s) | 209, 989 |
| BspCNI | CTCAG | 5 cut(s) | 365, 700, 1057, 1253, 1591 |
| BspLI | GGNNCC | 2 cut(s) | 214, 1122 |
| BspMAI | CTGCAG | 1 cut(s) | 512 |
| BspPI | GGATC | 4 cut(s) | 399, 637, 681, 813 |
| BspT107I | GGYRCC | 1 cut(s) | 212 |
| BsrDI | GCAATG | 1 cut(s) | 1593 |
| BsrI | ACTGG | 2 cut(s) | 592, 1107 |
| Bst2UI | CCWGG | 2 cut(s) | 129, 848 |
| Bst4CI | ACNGT | 1 cut(s) | 1396 |
| Bst6I | CTCTTC | 6 cut(s) | 14, 485, 968, 973, 1335, 1510 |
| BstC8I | GCNNGC | 1 cut(s) | 339 |
| BstF5I | GGATG | 5 cut(s) | 124, 137, 659, 922, 1514 |
| BstH2I | RGCGCY | 1 cut(s) | 175 |
| BstHHI | GCGC | 1 cut(s) | 174 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 66, 334 |
| BstNI | CCWGG | 2 cut(s) | 129, 848 |
| BstNSI | RCATGY | 1 cut(s) | 248 |
| BstSCI | CCNGG | 2 cut(s) | 127, 846 |
| BstSFI | CTRYAG | 2 cut(s) | 508, 1392 |
| BstV1I | GCAGC | 2 cut(s) | 53, 494 |
| BstV2I | GAAGAC | 1 cut(s) | 857 |
| BstX2I | RGATCY | 4 cut(s) | 82, 629, 686, 1609 |
| BstYI | RGATCY | 4 cut(s) | 82, 629, 686, 1609 |
| BsuI | GTATCC | 1 cut(s) | 694 |
| BtgZI | GCGATG | 1 cut(s) | 474 |
| BtsCI | GGATG | 5 cut(s) | 124, 137, 659, 922, 1514 |
| BtsIMutI | CAGTG | 1 cut(s) | 585 |
| Cac8I | GCNNGC | 1 cut(s) | 339 |
| CfoI | GCGC | 1 cut(s) | 174 |
| Csp6I | GTAC | 4 cut(s) | 160, 213, 954, 1145 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 89, 124 |
| CviAII | CATG | 4 cut(s) | 157, 245, 962, 1659 |
| CviQI | GTAC | 4 cut(s) | 160, 213, 954, 1145 |
| DraI | TTTAAA | 1 cut(s) | 486 |
| Eam1104I | CTCTTC | 6 cut(s) | 14, 485, 968, 973, 1335, 1510 |
| EarI | CTCTTC | 6 cut(s) | 14, 485, 968, 973, 1335, 1510 |
| Ecl136II | GAGCTC | 1 cut(s) | 987 |
| Eco24I | GRGCYC | 1 cut(s) | 989 |
| Eco32I | GATATC | 1 cut(s) | 717 |
| Eco47III | AGCGCT | 1 cut(s) | 173 |
| Eco53kI | GAGCTC | 1 cut(s) | 987 |
| Eco57I | CTGAAG | 3 cut(s) | 1136, 1175, 1315 |
| EcoICRI | GAGCTC | 1 cut(s) | 987 |
| EcoRII | CCWGG | 2 cut(s) | 127, 846 |
| EcoRV | GATATC | 1 cut(s) | 717 |
| EcoT22I | ATGCAT | 1 cut(s) | 250 |
| EcoT38I | GRGCYC | 1 cut(s) | 989 |
| FaeI | CATG | 4 cut(s) | 160, 248, 965, 1662 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 95, 127, 290, 322, 1082, 1114 |
| FatI | CATG | 4 cut(s) | 156, 244, 961, 1658 |
| FbaI | TGATCA | 3 cut(s) | 805, 1126, 1647 |
| FblI | GTMKAC | 1 cut(s) | 1631 |
| Fnu4HI | GCNGC | 2 cut(s) | 67, 508 |
| FokI | GGATG | 5 cut(s) | 111, 144, 666, 929, 1521 |
| FriOI | GRGCYC | 1 cut(s) | 989 |
| Fsp4HI | GCNGC | 2 cut(s) | 67, 508 |
| FspBI | CTAG | 6 cut(s) | 579, 641, 869, 1029, 1148, 1181 |
| GlaI | GCGC | 1 cut(s) | 173 |
| GluI | GCNGC | 2 cut(s) | 67, 508 |
| GsaI | CCCAGC | 1 cut(s) | 724 |
| GsuI | CTGGAG | 1 cut(s) | 1124 |
| HaeII | RGCGCY | 1 cut(s) | 175 |
| HapII | CCGG | 1 cut(s) | 1620 |
| HhaI | GCGC | 1 cut(s) | 174 |
| Hin1II | CATG | 4 cut(s) | 160, 248, 965, 1662 |
| Hin6I | GCGC | 1 cut(s) | 172 |
| HinP1I | GCGC | 1 cut(s) | 172 |
| HindIII | AAGCTT | 1 cut(s) | 1076 |
| HinfI | GANTC | 6 cut(s) | 44, 513, 1032, 1322, 1616, 1637 |
| HpaII | CCGG | 1 cut(s) | 1620 |
| HphI | GGTGA | 4 cut(s) | 1196, 1265, 1480, 1657 |
| Hpy166II | GTNNAC | 3 cut(s) | 242, 1084, 1632 |
| Hpy188III | TCNNGA | 6 cut(s) | 165, 395, 886, 1337, 1433, 1613 |
| Hpy8I | GTNNAC | 3 cut(s) | 242, 1084, 1632 |
| HpyAV | CCTTC | 7 cut(s) | 437, 691, 1111, 1199, 1408, 1498, 1536 |
| HpyCH4III | ACNGT | 1 cut(s) | 1396 |
| HpyCH4IV | ACGT | 1 cut(s) | 1365 |
| HpyCH4V | TGCA | 8 cut(s) | 248, 264, 284, 312, 510, 1276, 1429, 1477 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 66, 334 |
| HpySE526I | ACGT | 1 cut(s) | 1365 |
| Hsp92II | CATG | 4 cut(s) | 160, 248, 965, 1662 |
| HspAI | GCGC | 1 cut(s) | 172 |
| KpnI | GGTACC | 1 cut(s) | 216 |
| Ksp22I | TGATCA | 3 cut(s) | 805, 1126, 1647 |
| LmnI | GCTCC | 3 cut(s) | 1095, 1120, 1564 |
| Lsp1109I | GCAGC | 2 cut(s) | 53, 494 |
| LweI | GCATC | 4 cut(s) | 1013, 1061, 1438, 1572 |
| MaeI | CTAG | 6 cut(s) | 579, 641, 869, 1029, 1148, 1181 |
| MaeII | ACGT | 1 cut(s) | 1365 |
| MaeIII | GTNAC | 5 cut(s) | 539, 592, 746, 775, 1110 |
| MflI | RGATCY | 4 cut(s) | 82, 629, 686, 1609 |
| MhlI | GDGCHC | 2 cut(s) | 209, 989 |
| MluCI | AATT | 7 cut(s) | 481, 600, 836, 932, 1208, 1266, 1480 |
| MlyI | GAGTC | 1 cut(s) | 1631 |
| Mph1103I | ATGCAT | 1 cut(s) | 250 |
| MseI | TTAA | 5 cut(s) | 113, 485, 620, 1221, 1574 |
| MslI | CAYNNNNRTG | 1 cut(s) | 195 |
| MspI | CCGG | 1 cut(s) | 1620 |
| MspR9I | CCNGG | 2 cut(s) | 129, 848 |
| Mva1269I | GAATGC | 1 cut(s) | 190 |
| MvaI | CCWGG | 2 cut(s) | 129, 848 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 66, 334 |
| NlaIII | CATG | 4 cut(s) | 160, 248, 965, 1662 |
| NlaIV | GGNNCC | 2 cut(s) | 214, 1122 |
| NmuCI | GTSAC | 2 cut(s) | 539, 775 |
| NsiI | ATGCAT | 1 cut(s) | 250 |
| NspI | RCATGY | 1 cut(s) | 248 |
| PctI | GAATGC | 1 cut(s) | 190 |
| PfeI | GAWTC | 5 cut(s) | 44, 513, 1032, 1322, 1616 |
| PflFI | GACNNNGTC | 1 cut(s) | 562 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1366 |
| PfoI | TCCNGGA | 1 cut(s) | 127 |
| PkrI | GCNGC | 2 cut(s) | 68, 509 |
| PleI | GAGTC | 1 cut(s) | 1631 |
| PpsI | GAGTC | 1 cut(s) | 1631 |
| Psp124BI | GAGCTC | 1 cut(s) | 989 |
| Psp6I | CCWGG | 2 cut(s) | 127, 846 |
| PspFI | CCCAGC | 1 cut(s) | 720 |
| PspGI | CCWGG | 2 cut(s) | 127, 846 |
| PspN4I | GGNNCC | 2 cut(s) | 214, 1122 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 270, 302 |
| PstI | CTGCAG | 1 cut(s) | 512 |
| PsuI | RGATCY | 4 cut(s) | 82, 629, 686, 1609 |
| PsyI | GACNNNGTC | 1 cut(s) | 562 |
| RsaI | GTAC | 4 cut(s) | 161, 214, 955, 1146 |
| RsaNI | GTAC | 4 cut(s) | 160, 213, 954, 1145 |
| RseI | CAYNNNNRTG | 1 cut(s) | 195 |
| SacI | GAGCTC | 1 cut(s) | 989 |
| SaqAI | TTAA | 5 cut(s) | 113, 485, 620, 1221, 1574 |
| SatI | GCNGC | 2 cut(s) | 67, 508 |
| SchI | GAGTC | 1 cut(s) | 1631 |
| ScrFI | CCNGG | 2 cut(s) | 129, 848 |
| SduI | GDGCHC | 2 cut(s) | 209, 989 |
| SfaNI | GCATC | 4 cut(s) | 1013, 1061, 1438, 1572 |
| SfcI | CTRYAG | 2 cut(s) | 508, 1392 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 195 |
| SmlI | CTYRAG | 1 cut(s) | 217 |
| SmoI | CTYRAG | 1 cut(s) | 217 |
| SpeI | ACTAGT | 1 cut(s) | 578 |
| Sse9I | AATT | 7 cut(s) | 481, 600, 836, 932, 1208, 1266, 1480 |
| SspI | AATATT | 3 cut(s) | 419, 529, 739 |
| SspMI | CTAG | 6 cut(s) | 579, 641, 869, 1029, 1148, 1181 |
| SstI | GAGCTC | 1 cut(s) | 989 |
| StyD4I | CCNGG | 2 cut(s) | 127, 846 |
| TaaI | ACNGT | 1 cut(s) | 1396 |
| TaiI | ACGT | 1 cut(s) | 1368 |
| TaqI | TCGA | 1 cut(s) | 885 |
| TasI | AATT | 7 cut(s) | 481, 600, 836, 932, 1208, 1266, 1480 |
| TatI | WGTACW | 1 cut(s) | 159 |
| TfiI | GAWTC | 5 cut(s) | 44, 513, 1032, 1322, 1616 |
| Tru1I | TTAA | 5 cut(s) | 113, 485, 620, 1221, 1574 |
| Tru9I | TTAA | 5 cut(s) | 113, 485, 620, 1221, 1574 |
| TscAI | CASTG | 1 cut(s) | 592 |
| TseFI | GTSAC | 2 cut(s) | 539, 775 |
| TseI | GCWGC | 2 cut(s) | 66, 507 |
| Tsp45I | GTSAC | 2 cut(s) | 539, 775 |
| TspDTI | ATGAA | 5 cut(s) | 17, 414, 978, 1026, 1088 |
| TspGWI | ACGGA | 1 cut(s) | 1649 |
| TspRI | CASTG | 1 cut(s) | 592 |
| Tth111I | GACNNNGTC | 1 cut(s) | 562 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1366 |
| XapI | RAATTY | 3 cut(s) | 600, 836, 1266 |
| XceI | RCATGY | 1 cut(s) | 248 |
| XmiI | GTMKAC | 1 cut(s) | 1631 |
| XspI | CTAG | 6 cut(s) | 579, 641, 869, 1029, 1148, 1181 |
| Zsp2I | ATGCAT | 1 cut(s) | 250 |