zinc finger CCCH domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rho_N | PF07498 | 927 - 959 | 7.2e-06 | Rho termination factor, N-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2417 |
| Acc36I | ACCTGC | 1 cut(s) | 643 |
| AccB1I | GGYRCC | 2 cut(s) | 177, 1082 |
| AciI | CCGC | 4 cut(s) | 86, 1793, 1878, 2209 |
| AclWI | GGATC | 5 cut(s) | 260, 672, 1934, 2528, 2681 |
| AcsI | RAATTY | 4 cut(s) | 901, 1255, 1507, 2734 |
| AcuI | CTGAAG | 6 cut(s) | 858, 1041, 1218, 2268, 2367, 2825 |
| AcyI | GRCGYC | 1 cut(s) | 2414 |
| AfaI | GTAC | 3 cut(s) | 973, 1279, 1399 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 56, 277, 1757 |
| AflII | CTTAAG | 1 cut(s) | 2849 |
| AflIII | ACRYGT | 3 cut(s) | 524, 2090, 2426 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1907, 2796 |
| AhlI | ACTAGT | 2 cut(s) | 1070, 1292 |
| AjiI | CACGTC | 1 cut(s) | 2429 |
| AjnI | CCWGG | 2 cut(s) | 684, 2879 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1210, 1242 |
| Alw26I | GTCTC | 5 cut(s) | 213, 480, 739, 2457, 2475 |
| AlwI | GGATC | 5 cut(s) | 260, 672, 1934, 2528, 2681 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 619, 635, 2345 |
| AoxI | GGCC | 9 cut(s) | 515, 819, 922, 1163, 1173, 1409, 1921, 2039, 2224 |
| ApeKI | GCWGC | 4 cut(s) | 89, 700, 752, 929 |
| ApoI | RAATTY | 4 cut(s) | 901, 1255, 1507, 2734 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 335, 367, 2404, 2436 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 862, 1212 |
| AspA2I | CCTAGG | 1 cut(s) | 173 |
| AspLEI | GCGC | 1 cut(s) | 388 |
| AspS9I | GGNCC | 3 cut(s) | 262, 833, 922 |
| AsuC2I | CCSGG | 1 cut(s) | 323 |
| AsuHPI | GGTGA | 5 cut(s) | 99, 260, 1513, 1685, 1772 |
| AsuII | TTCGAA | 2 cut(s) | 673, 2204 |
| AvaII | GGWCC | 2 cut(s) | 262, 833 |
| AvrII | CCTAGG | 1 cut(s) | 173 |
| AxyI | CCTNAGG | 1 cut(s) | 222 |
| BaeGI | GKGCMC | 2 cut(s) | 1085, 1368 |
| BanI | GGYRCC | 2 cut(s) | 177, 1082 |
| BbsI | GAAGAC | 1 cut(s) | 2250 |
| BbvI | GCAGC | 4 cut(s) | 101, 712, 739, 941 |
| BccI | CCATC | 2 cut(s) | 1409, 2235 |
| BciT130I | CCWGG | 2 cut(s) | 686, 2881 |
| BclI | TGATCA | 2 cut(s) | 1044, 1948 |
| BcnI | CCSGG | 1 cut(s) | 323 |
| BcoDI | GTCTC | 5 cut(s) | 213, 480, 739, 2457, 2475 |
| BcuI | ACTAGT | 2 cut(s) | 1070, 1292 |
| BfmI | CTRYAG | 6 cut(s) | 636, 1572, 2103, 2337, 2433, 2601 |
| BfrI | CTTAAG | 1 cut(s) | 2849 |
| BfuAI | ACCTGC | 1 cut(s) | 643 |
| BglII | AGATCT | 1 cut(s) | 2509 |
| BisI | GCNGC | 5 cut(s) | 87, 90, 701, 753, 930 |
| BlnI | CCTAGG | 1 cut(s) | 173 |
| BlsI | GCNGC | 5 cut(s) | 88, 91, 702, 754, 931 |
| Bme1390I | CCNGG | 3 cut(s) | 323, 686, 2881 |
| Bme18I | GGWCC | 2 cut(s) | 262, 833 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1907, 2796 |
| BmgBI | CACGTC | 1 cut(s) | 2429 |
| BmgT120I | GGNCC | 3 cut(s) | 262, 833, 922 |
| BmiI | GGNNCC | 4 cut(s) | 179, 263, 1084, 2742 |
| BmrFI | CCNGG | 3 cut(s) | 323, 686, 2881 |
| BmsI | GCATC | 4 cut(s) | 612, 1232, 1710, 2527 |
| BpiI | GAAGAC | 1 cut(s) | 2250 |
| BpmI | CTGGAG | 2 cut(s) | 707, 2733 |
| Bpu14I | TTCGAA | 2 cut(s) | 673, 2204 |
| BpuEI | CTTGAG | 4 cut(s) | 260, 601, 2498, 2709 |
| BpuMI | CCSGG | 1 cut(s) | 323 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1947 |
| BsaHI | GRCGYC | 1 cut(s) | 2414 |
| BsaJI | CCNNGG | 4 cut(s) | 50, 173, 1166, 2019 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 56, 277, 1757 |
| Bse1I | ACTGG | 2 cut(s) | 1494, 2362 |
| Bse21I | CCTNAGG | 1 cut(s) | 222 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1947 |
| BseBI | CCWGG | 2 cut(s) | 686, 2881 |
| BseDI | CCNNGG | 4 cut(s) | 50, 173, 1166, 2019 |
| BseGI | GGATG | 4 cut(s) | 1544, 1987, 2395, 2518 |
| BseJI | GATNNNNATC | 1 cut(s) | 1947 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 56, 277, 1757 |
| BseMII | CTCAG | 6 cut(s) | 200, 236, 705, 747, 2670, 2765 |
| BseNI | ACTGG | 2 cut(s) | 1494, 2362 |
| BseRI | GAGGAG | 2 cut(s) | 263, 433 |
| BseSI | GKGCMC | 2 cut(s) | 1085, 1368 |
| BseXI | GCAGC | 4 cut(s) | 101, 712, 739, 941 |
| BseYI | CCCAGC | 1 cut(s) | 1880 |
| BsgI | GTGCAG | 3 cut(s) | 1047, 1785, 2093 |
| BshFI | GGCC | 9 cut(s) | 517, 821, 924, 1165, 1175, 1411, 1923, 2041, 2226 |
| BshNI | GGYRCC | 2 cut(s) | 177, 1082 |
| BsiSI | CCGG | 2 cut(s) | 323, 1924 |
| BslFI | GGGAC | 3 cut(s) | 322, 1993, 2672 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 56, 277, 1757 |
| BsmAI | GTCTC | 5 cut(s) | 213, 480, 739, 2457, 2475 |
| BsmBI | CGTCTC | 1 cut(s) | 2475 |
| BsmFI | GGGAC | 3 cut(s) | 322, 1993, 2672 |
| BsmI | GAATGC | 3 cut(s) | 1724, 1993, 2357 |
| BsnI | GGCC | 9 cut(s) | 517, 821, 924, 1165, 1175, 1411, 1923, 2041, 2226 |
| Bsp119I | TTCGAA | 2 cut(s) | 673, 2204 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1085, 1368 |
| Bsp19I | CCATGG | 1 cut(s) | 1166 |
| BspACI | CCGC | 4 cut(s) | 86, 1793, 1878, 2209 |
| BspANI | GGCC | 9 cut(s) | 517, 821, 924, 1165, 1175, 1411, 1923, 2041, 2226 |
| BspCNI | CTCAG | 6 cut(s) | 199, 235, 706, 746, 2671, 2766 |
| BspLI | GGNNCC | 4 cut(s) | 179, 263, 1084, 2742 |
| BspMAI | CTGCAG | 4 cut(s) | 640, 2341, 2437, 2605 |
| BspMI | ACCTGC | 1 cut(s) | 643 |
| BspPI | GGATC | 5 cut(s) | 260, 672, 1934, 2528, 2681 |
| BspT104I | TTCGAA | 2 cut(s) | 673, 2204 |
| BspT107I | GGYRCC | 2 cut(s) | 177, 1082 |
| BspTI | CTTAAG | 1 cut(s) | 2849 |
| BsrI | ACTGG | 2 cut(s) | 1494, 2362 |
| BssECI | CCNNGG | 4 cut(s) | 50, 173, 1166, 2019 |
| BssNI | GRCGYC | 1 cut(s) | 2414 |
| BssT1I | CCWWGG | 4 cut(s) | 50, 173, 1166, 2019 |
| Bst2UI | CCWGG | 2 cut(s) | 686, 2881 |
| Bst4CI | ACNGT | 6 cut(s) | 566, 1909, 2071, 2276, 2295, 2794 |
| Bst6I | CTCTTC | 4 cut(s) | 483, 1703, 2300, 2396 |
| BstACI | GRCGYC | 1 cut(s) | 2414 |
| BstAFI | CTTAAG | 1 cut(s) | 2849 |
| BstBI | TTCGAA | 2 cut(s) | 673, 2204 |
| BstDEI | CTNAG | 7 cut(s) | 186, 222, 572, 714, 733, 2679, 2774 |
| BstDSI | CCRYGG | 1 cut(s) | 1166 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 54, 275 |
| BstF5I | GGATG | 4 cut(s) | 1544, 1987, 2395, 2518 |
| BstHHI | GCGC | 1 cut(s) | 388 |
| BstMAI | GTCTC | 5 cut(s) | 213, 480, 739, 2457, 2475 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2869 |
| BstNI | CCWGG | 2 cut(s) | 686, 2881 |
| BstNSI | RCATGY | 5 cut(s) | 528, 1519, 1653, 2094, 2258 |
| BstSCI | CCNGG | 3 cut(s) | 321, 684, 2879 |
| BstSFI | CTRYAG | 6 cut(s) | 636, 1572, 2103, 2337, 2433, 2601 |
| BstSLI | GKGCMC | 2 cut(s) | 1085, 1368 |
| BstV1I | GCAGC | 4 cut(s) | 101, 712, 739, 941 |
| BstV2I | GAAGAC | 1 cut(s) | 2250 |
| BstX2I | RGATCY | 5 cut(s) | 252, 664, 2509, 2533, 2686 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 51 |
| BstYI | RGATCY | 5 cut(s) | 252, 664, 2509, 2533, 2686 |
| Bsu36I | CCTNAGG | 1 cut(s) | 222 |
| BsuRI | GGCC | 9 cut(s) | 517, 821, 924, 1165, 1175, 1411, 1923, 2041, 2226 |
| BtgI | CCRYGG | 1 cut(s) | 1166 |
| BtrI | CACGTC | 1 cut(s) | 2429 |
| BtsCI | GGATG | 4 cut(s) | 1544, 1987, 2395, 2518 |
| BtsI | GCAGTG | 2 cut(s) | 344, 995 |
| BtsIMutI | CAGTG | 8 cut(s) | 344, 617, 939, 995, 1501, 1929, 2343, 2355 |
| BveI | ACCTGC | 1 cut(s) | 643 |
| CaiI | CAGNNNCTG | 3 cut(s) | 619, 635, 2345 |
| CfoI | GCGC | 1 cut(s) | 388 |
| Cfr13I | GGNCC | 3 cut(s) | 262, 833, 922 |
| CseI | GACGC | 1 cut(s) | 2492 |
| Csp6I | GTAC | 3 cut(s) | 972, 1278, 1398 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2248, 2283 |
| CviQI | GTAC | 3 cut(s) | 972, 1278, 1398 |
| DdeI | CTNAG | 7 cut(s) | 186, 222, 572, 714, 733, 2679, 2774 |
| DraI | TTTAAA | 1 cut(s) | 1872 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1907, 2796 |
| Eam1104I | CTCTTC | 4 cut(s) | 483, 1703, 2300, 2396 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1907, 2796 |
| EarI | CTCTTC | 4 cut(s) | 483, 1703, 2300, 2396 |
| Eco130I | CCWWGG | 4 cut(s) | 50, 173, 1166, 2019 |
| Eco147I | AGGCCT | 1 cut(s) | 1411 |
| Eco32I | GATATC | 1 cut(s) | 2363 |
| Eco47I | GGWCC | 2 cut(s) | 262, 833 |
| Eco57I | CTGAAG | 6 cut(s) | 858, 1041, 1218, 2268, 2367, 2825 |
| Eco81I | CCTNAGG | 1 cut(s) | 222 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 54, 275 |
| EcoO109I | RGGNCCY | 1 cut(s) | 833 |
| EcoRI | GAATTC | 1 cut(s) | 901 |
| EcoRII | CCWGG | 2 cut(s) | 684, 2879 |
| EcoRV | GATATC | 1 cut(s) | 2363 |
| EcoT14I | CCWWGG | 4 cut(s) | 50, 173, 1166, 2019 |
| EcoT22I | ATGCAT | 2 cut(s) | 627, 1517 |
| ErhI | CCWWGG | 4 cut(s) | 50, 173, 1166, 2019 |
| Esp3I | CGTCTC | 1 cut(s) | 2475 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 847, 879 |
| FaqI | GGGAC | 3 cut(s) | 322, 1993, 2672 |
| FbaI | TGATCA | 2 cut(s) | 1044, 1948 |
| Fnu4HI | GCNGC | 5 cut(s) | 87, 90, 701, 753, 930 |
| FokI | GGATG | 4 cut(s) | 1551, 1994, 2402, 2505 |
| Fsp4HI | GCNGC | 5 cut(s) | 87, 90, 701, 753, 930 |
| GlaI | GCGC | 1 cut(s) | 387 |
| GluI | GCNGC | 5 cut(s) | 87, 90, 701, 753, 930 |
| GsaI | CCCAGC | 1 cut(s) | 1884 |
| GsuI | CTGGAG | 2 cut(s) | 707, 2733 |
| HaeIII | GGCC | 9 cut(s) | 517, 821, 924, 1165, 1175, 1411, 1923, 2041, 2226 |
| HapII | CCGG | 2 cut(s) | 323, 1924 |
| HgaI | GACGC | 1 cut(s) | 2492 |
| HhaI | GCGC | 1 cut(s) | 388 |
| Hin1I | GRCGYC | 1 cut(s) | 2414 |
| Hin6I | GCGC | 1 cut(s) | 386 |
| HinP1I | GCGC | 1 cut(s) | 386 |
| HincII | GTYRAC | 2 cut(s) | 2418, 2801 |
| HindII | GTYRAC | 2 cut(s) | 2418, 2801 |
| HindIII | AAGCTT | 1 cut(s) | 2846 |
| HpaII | CCGG | 2 cut(s) | 323, 1924 |
| HphI | GGTGA | 5 cut(s) | 99, 260, 1513, 1685, 1772 |
| Hpy166II | GTNNAC | 3 cut(s) | 954, 2418, 2801 |
| Hpy8I | GTNNAC | 3 cut(s) | 954, 2418, 2801 |
| Hpy99I | CGWCG | 1 cut(s) | 2128 |
| HpyAV | CCTTC | 6 cut(s) | 655, 1232, 1637, 2109, 2776, 2800 |
| HpyCH4III | ACNGT | 6 cut(s) | 566, 1909, 2071, 2276, 2295, 2794 |
| HpyCH4IV | ACGT | 7 cut(s) | 22, 681, 779, 956, 2126, 2414, 2428 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2869 |
| HpyF3I | CTNAG | 7 cut(s) | 186, 222, 572, 714, 733, 2679, 2774 |
| HpySE526I | ACGT | 7 cut(s) | 22, 681, 779, 956, 2126, 2414, 2428 |
| Hsp92I | GRCGYC | 1 cut(s) | 2414 |
| HspAI | GCGC | 1 cut(s) | 386 |
| Ksp22I | TGATCA | 2 cut(s) | 1044, 1948 |
| LmnI | GCTCC | 3 cut(s) | 1021, 1307, 2860 |
| Lsp1109I | GCAGC | 4 cut(s) | 101, 712, 739, 941 |
| LweI | GCATC | 4 cut(s) | 612, 1232, 1710, 2527 |
| MaeII | ACGT | 7 cut(s) | 22, 681, 779, 956, 2126, 2414, 2428 |
| MaeIII | GTNAC | 9 cut(s) | 105, 189, 266, 615, 1841, 2270, 2410, 2559, 2894 |
| MflI | RGATCY | 5 cut(s) | 252, 664, 2509, 2533, 2686 |
| MhlI | GDGCHC | 2 cut(s) | 1085, 1368 |
| MlyI | GAGTC | 4 cut(s) | 141, 215, 1828, 2311 |
| MmeI | TCCRAC | 3 cut(s) | 1241, 2654, 2780 |
| Mph1103I | ATGCAT | 2 cut(s) | 627, 1517 |
| MroXI | GAANNNNTTC | 2 cut(s) | 862, 1212 |
| MseI | TTAA | 8 cut(s) | 1266, 1604, 1745, 1818, 1871, 2186, 2442, 2850 |
| MslI | CAYNNNNRTG | 2 cut(s) | 101, 2388 |
| MspA1I | CMGCKG | 4 cut(s) | 932, 1112, 1697, 1880 |
| MspCI | CTTAAG | 1 cut(s) | 2849 |
| MspI | CCGG | 2 cut(s) | 323, 1924 |
| MspR9I | CCNGG | 3 cut(s) | 323, 686, 2881 |
| Mva1269I | GAATGC | 3 cut(s) | 1724, 1993, 2357 |
| MvaI | CCWGG | 2 cut(s) | 686, 2881 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2869 |
| NciI | CCSGG | 1 cut(s) | 323 |
| NcoI | CCATGG | 1 cut(s) | 1166 |
| NlaIV | GGNNCC | 4 cut(s) | 179, 263, 1084, 2742 |
| NmuCI | GTSAC | 7 cut(s) | 105, 189, 266, 615, 2410, 2559, 2894 |
| NsiI | ATGCAT | 2 cut(s) | 627, 1517 |
| NspI | RCATGY | 5 cut(s) | 528, 1519, 1653, 2094, 2258 |
| NspV | TTCGAA | 2 cut(s) | 673, 2204 |
| PaeI | GCATGC | 1 cut(s) | 1519 |
| PceI | AGGCCT | 1 cut(s) | 1411 |
| PciI | ACATGT | 2 cut(s) | 524, 2090 |
| PctI | GAATGC | 3 cut(s) | 1724, 1993, 2357 |
| PdmI | GAANNNNTTC | 2 cut(s) | 862, 1212 |
| PflFI | GACNNNGTC | 1 cut(s) | 831 |
| PfoI | TCCNGGA | 2 cut(s) | 321, 684 |
| PkrI | GCNGC | 5 cut(s) | 88, 91, 702, 754, 931 |
| PleI | GAGTC | 4 cut(s) | 140, 214, 1828, 2311 |
| PpsI | GAGTC | 4 cut(s) | 140, 214, 1828, 2311 |
| PpuMI | RGGWCCY | 1 cut(s) | 833 |
| PscI | ACATGT | 2 cut(s) | 524, 2090 |
| Psp5II | RGGWCCY | 1 cut(s) | 833 |
| Psp6I | CCWGG | 2 cut(s) | 684, 2879 |
| PspFI | CCCAGC | 1 cut(s) | 1880 |
| PspGI | CCWGG | 2 cut(s) | 684, 2879 |
| PspN4I | GGNNCC | 4 cut(s) | 179, 263, 1084, 2742 |
| PspPI | GGNCC | 3 cut(s) | 262, 833, 922 |
| PspPPI | RGGWCCY | 1 cut(s) | 833 |
| PstI | CTGCAG | 4 cut(s) | 640, 2341, 2437, 2605 |
| PstNI | CAGNNNCTG | 3 cut(s) | 619, 635, 2345 |
| PsuI | RGATCY | 5 cut(s) | 252, 664, 2509, 2533, 2686 |
| PsyI | GACNNNGTC | 1 cut(s) | 831 |
| PvuII | CAGCTG | 3 cut(s) | 932, 1112, 1697 |
| RsaI | GTAC | 3 cut(s) | 973, 1279, 1399 |
| RsaNI | GTAC | 3 cut(s) | 972, 1278, 1398 |
| RseI | CAYNNNNRTG | 2 cut(s) | 101, 2388 |
| SaqAI | TTAA | 8 cut(s) | 1266, 1604, 1745, 1818, 1871, 2186, 2442, 2850 |
| SatI | GCNGC | 5 cut(s) | 87, 90, 701, 753, 930 |
| Sau96I | GGNCC | 3 cut(s) | 262, 833, 922 |
| SchI | GAGTC | 4 cut(s) | 141, 215, 1828, 2311 |
| ScrFI | CCNGG | 3 cut(s) | 323, 686, 2881 |
| SduI | GDGCHC | 2 cut(s) | 1085, 1368 |
| SfaNI | GCATC | 4 cut(s) | 612, 1232, 1710, 2527 |
| SfcI | CTRYAG | 6 cut(s) | 636, 1572, 2103, 2337, 2433, 2601 |
| SfuI | TTCGAA | 2 cut(s) | 673, 2204 |
| SinI | GGWCC | 2 cut(s) | 262, 833 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 101, 2388 |
| SmlI | CTYRAG | 5 cut(s) | 275, 580, 2513, 2724, 2849 |
| SmoI | CTYRAG | 5 cut(s) | 275, 580, 2513, 2724, 2849 |
| SpeI | ACTAGT | 2 cut(s) | 1070, 1292 |
| SphI | GCATGC | 1 cut(s) | 1519 |
| SseBI | AGGCCT | 1 cut(s) | 1411 |
| SsiI | CCGC | 4 cut(s) | 86, 1793, 1878, 2209 |
| SspI | AATATT | 2 cut(s) | 604, 1286 |
| StuI | AGGCCT | 1 cut(s) | 1411 |
| StyD4I | CCNGG | 3 cut(s) | 321, 684, 2879 |
| StyI | CCWWGG | 4 cut(s) | 50, 173, 1166, 2019 |
| TaaI | ACNGT | 6 cut(s) | 566, 1909, 2071, 2276, 2295, 2794 |
| TaiI | ACGT | 7 cut(s) | 25, 684, 782, 959, 2129, 2417, 2431 |
| TaqI | TCGA | 5 cut(s) | 673, 1900, 2204, 2372, 2826 |
| TaqII | GACCGA | 1 cut(s) | 452 |
| TatI | WGTACW | 2 cut(s) | 971, 1277 |
| TauI | GCSGC | 1 cut(s) | 89 |
| Tru1I | TTAA | 8 cut(s) | 1266, 1604, 1745, 1818, 1871, 2186, 2442, 2850 |
| Tru9I | TTAA | 8 cut(s) | 1266, 1604, 1745, 1818, 1871, 2186, 2442, 2850 |
| TscAI | CASTG | 8 cut(s) | 344, 624, 946, 995, 1501, 1936, 2350, 2362 |
| TseFI | GTSAC | 7 cut(s) | 105, 189, 266, 615, 2410, 2559, 2894 |
| TseI | GCWGC | 4 cut(s) | 89, 700, 752, 929 |
| Tsp45I | GTSAC | 7 cut(s) | 105, 189, 266, 615, 2410, 2559, 2894 |
| TspGWI | ACGGA | 2 cut(s) | 254, 2733 |
| TspRI | CASTG | 8 cut(s) | 344, 624, 946, 995, 1501, 1936, 2350, 2362 |
| Tth111I | GACNNNGTC | 1 cut(s) | 831 |
| Vha464I | CTTAAG | 1 cut(s) | 2849 |
| VpaK11BI | GGWCC | 2 cut(s) | 262, 833 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 54, 275 |
| XapI | RAATTY | 4 cut(s) | 901, 1255, 1507, 2734 |
| XceI | RCATGY | 5 cut(s) | 528, 1519, 1653, 2094, 2258 |
| XmaJI | CCTAGG | 1 cut(s) | 173 |
| XmnI | GAANNNNTTC | 2 cut(s) | 862, 1212 |
| ZraI | GACGTC | 1 cut(s) | 2415 |
| Zsp2I | ATGCAT | 2 cut(s) | 627, 1517 |