AT2G30970

Aspartate aminotransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
13178829 .. 13182050
3222 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G30970.1

Sequence Viewer

Length: 1293 bp
ATGGCTTTGGCGATGATGATCCGAAACGCAGCTTCGAAGCGAGGAATGACTCCGATCTCCGGTCATTTCGGTGGTTTGAGATCTATGTCTTCATGGTGGAAGAGCGTTGAGCCTGCTCCTAAAGATCCGATCCTCGGAGTTACCGAAGCTTTTCTCGCTGATCCTAGTCCTGAAAAAGTTAATGTTGGTGTGGGAGCATATCGTGATGATAATGGGAAGCCTGTTGTCTTGGAATGTGTCAGAGAAGCTGAGAAAAGGCTTGCTGGGAGCACTTTCATGGAGTACCTTCCTATGGGAGGAAGTGCCAAAATGGTGGACCTAACATTGAAGCTTGCCTATGGGGACAATAGTGAATTTATCAAAGATAAAAGAATTGCTGCAGTTCAGACTCTGTCTGGCACTGGAGCCTGCCGGCTCTTTGCAGACTTCCAGAAACGTTTTTCTCCTGGTTCACAGATCTACATTCCTGTTCCAACCTGGTCCAACCACCACAACATCTGGAAAGATGCACAAGTCCCTCAAAAGACATATCATTACTATCATCCAGAAACCAAGGGCTTGGATTTCTCAGCATTGATGGATGATGTGAAGAATGCTCCGGAAGGGTCATTCTTCCTTCTTCATGCTTGTGCTCATAATCCTACTGGAGTAGACCCTACAGAGGAACAATGGAGAGAGATATCACAGCTATTCAAGGCTAAAAAGCATTTCGCATTCTTCGATATGGCTTACCAAGGTTTTGCTAGTGGAGATCCAGCGAGAGATGCCAAGTCCATCAGGATCTTTCTTGAAGATGGTCATCATATTGGAATTTCTCAGTCCTATGCAAAAAACATGGGACTCTACGGCCAGAGGGTGGGATGTCTCAGTGTGCTTTGTGAAGATCCGAAGCAAGCCGTGGCTGTGAAAAGTCAATTGCAGCAGCTAGCTAGACCAATGTACAGCAACCCACCTTTGCATGGTGCTCAGCTGGTCTCAACCATTCTTGAAGACCCAGAGTTAAAGAGTCTGTGGCTAAAAGAAGTTAAGGTCATGGCTGATAGGATCATCGGCATGAGAACTACTTTGCGAGAAAGCCTTGAGAAGTTAGGATCGCCTTTGTCATGGGAGCACGTTACCAAACAGATTGGAATGTTCTGCTACAGTGGGTTAACACCAGAACAGGTTGACCGCTTAACAAGCGAATATCACATCTATATGACCCGTAACGGCCGTATCAGTATGGCTGGTGTTACAACAGGAAACGTGGGATACCTTGCGAATGCTATACATGAAGTCACCAAGTCATCTTAA

Protein Analysis

430

Amino Acids

47.76

Weight (kDa)

8.36

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 58 - 423 1.9e-97 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 856
AccI GTMKAC 1 cut(s) 651
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 1 cut(s) 1171
AclI AACGTT 1 cut(s) 436
AclWI GGATC 9 cut(s) 13, 119, 124, 155, 746, 788, 878, 1052, 1099
AcoI YGGCCR 2 cut(s) 847, 1210
AcsI RAATTY 2 cut(s) 353, 810
AfaI GTAC 2 cut(s) 284, 941
AfiI CCNNNNNNNGG 7 cut(s) 59, 134, 292, 296, 661, 856, 959
AgsI TTSAA 4 cut(s) 328, 694, 791, 989
AjnI CCWGG 2 cut(s) 445, 476
AluBI AGCT 8 cut(s) 32, 149, 248, 331, 688, 925, 929, 970
AluI AGCT 8 cut(s) 32, 149, 248, 331, 688, 925, 929, 970
Alw21I GWGCWC 4 cut(s) 272, 634, 967, 1113
Alw26I GTCTC 2 cut(s) 869, 979
AlwI GGATC 9 cut(s) 13, 119, 124, 155, 746, 788, 878, 1052, 1099
AlwNI CAGNNNCTG 1 cut(s) 391
Aor13HI TCCGGA 1 cut(s) 598
AoxI GGCC 2 cut(s) 847, 1210
ApeKI GCWGC 4 cut(s) 29, 377, 919, 922
ApoI RAATTY 2 cut(s) 353, 810
Asp700I GAANNNNTTC 1 cut(s) 150
AspS9I GGNCC 2 cut(s) 316, 480
AsuHPI GGTGA 1 cut(s) 1270
AsuII TTCGAA 1 cut(s) 35
AsuNHI GCTAGC 1 cut(s) 925
AvaII GGWCC 2 cut(s) 316, 480
BaeI ACNNNNGTAYC 2 cut(s) 1198, 1231
BbsI GAAGAC 2 cut(s) 81, 996
Bbv12I GWGCWC 4 cut(s) 272, 634, 967, 1113
BbvI GCAGC 4 cut(s) 41, 364, 931, 934
BccI CCATC 3 cut(s) 571, 782, 788
BceAI ACGGC 4 cut(s) 862, 881, 1197, 1225
BciT130I CCWGG 2 cut(s) 447, 478
BciVI GTATCC 1 cut(s) 1244
BcoDI GTCTC 2 cut(s) 869, 979
BfaI CTAG 4 cut(s) 165, 744, 926, 930
BfmI CTRYAG 3 cut(s) 378, 657, 1141
BfuI GTATCC 1 cut(s) 1244
BglII AGATCT 2 cut(s) 80, 456
BisI GCNGC 4 cut(s) 30, 378, 920, 923
BlpI GCTNAGC 1 cut(s) 966
BlsI GCNGC 4 cut(s) 31, 379, 921, 924
Bme1390I CCNGG 2 cut(s) 447, 478
Bme18I GGWCC 2 cut(s) 316, 480
BmgT120I GGNCC 2 cut(s) 316, 480
BmiI GGNNCC 1 cut(s) 406
BmrFI CCNGG 2 cut(s) 447, 478
BmsI GCATC 2 cut(s) 496, 754
BmtI GCTAGC 1 cut(s) 929
BpiI GAAGAC 2 cut(s) 81, 996
BpmI CTGGAG 2 cut(s) 423, 666
Bpu1102I GCTNAGC 1 cut(s) 966
Bpu14I TTCGAA 1 cut(s) 35
BpuEI CTTGAG 1 cut(s) 1100
BsaBI GATNNNNATC 2 cut(s) 17, 798
BsaI GGTCTC 1 cut(s) 979
BsaJI CCNNGG 4 cut(s) 133, 552, 733, 897
BsaWI WCCGGW 2 cut(s) 59, 598
Bsc4I CCNNNNNNNGG 7 cut(s) 59, 134, 292, 296, 661, 856, 959
Bse118I RCCGGY 1 cut(s) 411
Bse1I ACTGG 2 cut(s) 406, 649
Bse8I GATNNNNATC 2 cut(s) 17, 798
BseAI TCCGGA 1 cut(s) 598
BseBI CCWGG 2 cut(s) 447, 478
BseDI CCNNGG 4 cut(s) 133, 552, 733, 897
BseGI GGATG 3 cut(s) 541, 586, 866
BseJI GATNNNNATC 2 cut(s) 17, 798
BseLI CCNNNNNNNGG 7 cut(s) 59, 134, 292, 296, 661, 856, 959
BseMII CTCAG 5 cut(s) 240, 582, 830, 880, 980
BseNI ACTGG 2 cut(s) 406, 649
BseX3I CGGCCG 1 cut(s) 1210
BseXI GCAGC 4 cut(s) 41, 364, 931, 934
BseYI CCCAGC 1 cut(s) 263
Bsh1285I CGRYCG 1 cut(s) 1213
BshFI GGCC 2 cut(s) 849, 1212
BsiEI CGRYCG 1 cut(s) 1213
BsiHKAI GWGCWC 4 cut(s) 272, 634, 967, 1113
BsiSI CCGG 3 cut(s) 60, 412, 599
BslFI GGGAC 3 cut(s) 356, 500, 852
BslI CCNNNNNNNGG 7 cut(s) 59, 134, 292, 296, 661, 856, 959
BsmAI GTCTC 2 cut(s) 869, 979
BsmFI GGGAC 3 cut(s) 356, 500, 852
BsmI GAATGC 3 cut(s) 598, 713, 1267
BsnI GGCC 2 cut(s) 849, 1212
Bso31I GGTCTC 1 cut(s) 979
Bsp119I TTCGAA 1 cut(s) 35
Bsp1286I GDGCHC 4 cut(s) 272, 634, 967, 1113
Bsp13I TCCGGA 1 cut(s) 598
Bsp1407I TGTACA 1 cut(s) 939
Bsp1720I GCTNAGC 1 cut(s) 966
BspACI CCGC 1 cut(s) 1171
BspANI GGCC 2 cut(s) 849, 1212
BspCNI CTCAG 5 cut(s) 241, 581, 829, 879, 979
BspEI TCCGGA 1 cut(s) 598
BspLI GGNNCC 1 cut(s) 406
BspMAI CTGCAG 1 cut(s) 382
BspOI GCTAGC 1 cut(s) 929
BspPI GGATC 9 cut(s) 13, 119, 124, 155, 746, 788, 878, 1052, 1099
BspQI GCTCTTC 1 cut(s) 95
BspT104I TTCGAA 1 cut(s) 35
BspTNI GGTCTC 1 cut(s) 979
BsrFI RCCGGY 1 cut(s) 411
BsrGI TGTACA 1 cut(s) 939
BsrI ACTGG 2 cut(s) 406, 649
BssAI RCCGGY 1 cut(s) 411
BssECI CCNNGG 4 cut(s) 133, 552, 733, 897
BssT1I CCWWGG 2 cut(s) 552, 733
Bst2UI CCWGG 2 cut(s) 447, 478
Bst4CI ACNGT 1 cut(s) 1145
Bst6I CTCTTC 1 cut(s) 95
BstAUI TGTACA 1 cut(s) 939
BstBI TTCGAA 1 cut(s) 35
BstC8I GCNNGC 7 cut(s) 114, 261, 333, 409, 413, 894, 927
BstDEI CTNAG 5 cut(s) 249, 568, 816, 866, 966
BstDSI CCRYGG 1 cut(s) 897
BstENI CCTNNNNNAGG 1 cut(s) 294
BstF5I GGATG 3 cut(s) 541, 586, 866
BstMAI GTCTC 2 cut(s) 869, 979
BstMCI CGRYCG 1 cut(s) 1213
BstMWI GCNNNNNNNGC 3 cut(s) 155, 764, 1179
BstNI CCWGG 2 cut(s) 447, 478
BstSCI CCNGG 2 cut(s) 445, 476
BstSFI CTRYAG 3 cut(s) 378, 657, 1141
BstV1I GCAGC 4 cut(s) 41, 364, 931, 934
BstV2I GAAGAC 2 cut(s) 81, 996
BstX2I RGATCY 6 cut(s) 80, 124, 456, 751, 780, 883
BstXI CCANNNNNNTGG 2 cut(s) 313, 559
BstYI RGATCY 6 cut(s) 80, 124, 456, 751, 780, 883
BstZI CGGCCG 1 cut(s) 1210
BsuI GTATCC 1 cut(s) 1244
BsuRI GGCC 2 cut(s) 849, 1212
BtgI CCRYGG 1 cut(s) 897
BtgZI GCGATG 1 cut(s) 26
BtsCI GGATG 3 cut(s) 541, 586, 866
BtsIMutI CAGTG 3 cut(s) 399, 874, 1150
Cac8I GCNNGC 7 cut(s) 114, 261, 333, 409, 413, 894, 927
CaiI CAGNNNCTG 1 cut(s) 391
Cfr10I RCCGGY 1 cut(s) 411
Cfr13I GGNCC 2 cut(s) 316, 480
CsiI ACCWGGT 1 cut(s) 476
Csp6I GTAC 2 cut(s) 283, 940
CviAII CATG 9 cut(s) 93, 277, 623, 835, 959, 1033, 1054, 1104, 1271
CviQI GTAC 2 cut(s) 283, 940
DdeI CTNAG 5 cut(s) 249, 568, 816, 866, 966
EaeI YGGCCR 2 cut(s) 847, 1210
EagI CGGCCG 1 cut(s) 1210
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
EclXI CGGCCG 1 cut(s) 1210
Eco130I CCWWGG 2 cut(s) 552, 733
Eco31I GGTCTC 1 cut(s) 979
Eco32I GATATC 1 cut(s) 681
Eco47I GGWCC 2 cut(s) 316, 480
Eco52I CGGCCG 1 cut(s) 1210
EcoNI CCTNNNNNAGG 1 cut(s) 294
EcoRII CCWGG 2 cut(s) 445, 476
EcoRV GATATC 1 cut(s) 681
EcoT14I CCWWGG 2 cut(s) 552, 733
ErhI CCWWGG 2 cut(s) 552, 733
FaeI CATG 9 cut(s) 96, 280, 626, 838, 962, 1036, 1057, 1107, 1274
FaqI GGGAC 3 cut(s) 356, 500, 852
FatI CATG 9 cut(s) 92, 276, 622, 834, 958, 1032, 1053, 1103, 1270
FblI GTMKAC 1 cut(s) 651
Fnu4HI GCNGC 4 cut(s) 30, 378, 920, 923
FokI GGATG 3 cut(s) 528, 593, 873
Fsp4HI GCNGC 4 cut(s) 30, 378, 920, 923
FspBI CTAG 4 cut(s) 165, 744, 926, 930
GluI GCNGC 4 cut(s) 30, 378, 920, 923
GsaI CCCAGC 1 cut(s) 267
GsuI CTGGAG 2 cut(s) 423, 666
HaeIII GGCC 2 cut(s) 849, 1212
HapII CCGG 3 cut(s) 60, 412, 599
Hin1II CATG 9 cut(s) 96, 280, 626, 838, 962, 1036, 1057, 1107, 1274
HincII GTYRAC 2 cut(s) 1152, 1168
HindII GTYRAC 2 cut(s) 1152, 1168
HindIII AAGCTT 2 cut(s) 147, 329
HinfI GANTC 4 cut(s) 49, 388, 840, 1006
HpaI GTTAAC 1 cut(s) 1152
HpaII CCGG 3 cut(s) 60, 412, 599
HphI GGTGA 1 cut(s) 1270
Hpy166II GTNNAC 5 cut(s) 316, 452, 652, 1152, 1168
Hpy188I TCNGA 7 cut(s) 23, 54, 129, 137, 242, 387, 888
Hpy188III TCNNGA 9 cut(s) 170, 203, 430, 499, 545, 599, 778, 788, 986
Hpy8I GTNNAC 5 cut(s) 316, 452, 652, 1152, 1168
HpyAV CCTTC 3 cut(s) 296, 596, 626
HpyCH4III ACNGT 1 cut(s) 1145
HpyCH4IV ACGT 3 cut(s) 436, 1113, 1245
HpyCH4V TGCA 6 cut(s) 380, 422, 509, 827, 919, 958
HpyF10VI GCNNNNNNNGC 3 cut(s) 155, 764, 1179
HpyF3I CTNAG 5 cut(s) 249, 568, 816, 866, 966
HpySE526I ACGT 3 cut(s) 436, 1113, 1245
Hsp92II CATG 9 cut(s) 96, 280, 626, 838, 962, 1036, 1057, 1107, 1274
Kpn2I TCCGGA 1 cut(s) 598
KroI GCCGGC 1 cut(s) 411
KroNI GCCGGC 1 cut(s) 413
KspAI GTTAAC 1 cut(s) 1152
LguI GCTCTTC 1 cut(s) 95
LmnI GCTCC 6 cut(s) 121, 194, 267, 404, 601, 1108
Lsp1109I GCAGC 4 cut(s) 41, 364, 931, 934
LweI GCATC 2 cut(s) 496, 754
MabI ACCWGGT 1 cut(s) 476
MaeI CTAG 4 cut(s) 165, 744, 926, 930
MaeII ACGT 3 cut(s) 436, 1113, 1245
MaeIII GTNAC 5 cut(s) 139, 1114, 1205, 1231, 1276
MboII GAAGA 9 cut(s) 81, 112, 601, 604, 611, 709, 803, 893, 1001
MfeI CAATTG 1 cut(s) 914
MflI RGATCY 6 cut(s) 80, 124, 456, 751, 780, 883
MhlI GDGCHC 4 cut(s) 272, 634, 967, 1113
MluCI AATT 4 cut(s) 353, 372, 810, 914
MlyI GAGTC 4 cut(s) 43, 382, 834, 1015
MmeI TCCRAC 2 cut(s) 497, 507
MnlI CCTC 6 cut(s) 35, 143, 290, 528, 655, 846
MroI TCCGGA 1 cut(s) 598
MroNI GCCGGC 1 cut(s) 411
MroXI GAANNNNTTC 1 cut(s) 150
MseI TTAA 6 cut(s) 180, 1001, 1026, 1151, 1175, 1291
MslI CAYNNNNRTG 5 cut(s) 69, 275, 627, 1052, 1196
MspA1I CMGCKG 1 cut(s) 970
MspI CCGG 3 cut(s) 60, 412, 599
MspR9I CCNGG 2 cut(s) 447, 478
MunI CAATTG 1 cut(s) 914
Mva1269I GAATGC 3 cut(s) 598, 713, 1267
MvaI CCWGG 2 cut(s) 447, 478
MwoI GCNNNNNNNGC 3 cut(s) 155, 764, 1179
NaeI GCCGGC 1 cut(s) 413
NgoMIV GCCGGC 1 cut(s) 411
NheI GCTAGC 1 cut(s) 925
NlaIII CATG 9 cut(s) 96, 280, 626, 838, 962, 1036, 1057, 1107, 1274
NlaIV GGNNCC 1 cut(s) 406
NmuCI GTSAC 1 cut(s) 1276
NspV TTCGAA 1 cut(s) 35
PciSI GCTCTTC 1 cut(s) 95
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 717
PctI GAATGC 3 cut(s) 598, 713, 1267
PdiI GCCGGC 1 cut(s) 413
PdmI GAANNNNTTC 1 cut(s) 150
PflFI GACNNNGTC 1 cut(s) 391
PflMI CCANNNNNTGG 1 cut(s) 856
PkrI GCNGC 4 cut(s) 31, 379, 921, 924
PleI GAGTC 4 cut(s) 43, 382, 834, 1014
PpsI GAGTC 4 cut(s) 43, 382, 834, 1014
Psp1406I AACGTT 1 cut(s) 436
Psp6I CCWGG 2 cut(s) 445, 476
PspFI CCCAGC 1 cut(s) 263
PspGI CCWGG 2 cut(s) 445, 476
PspN4I GGNNCC 1 cut(s) 406
PspPI GGNCC 2 cut(s) 316, 480
PstI CTGCAG 1 cut(s) 382
PstNI CAGNNNCTG 1 cut(s) 391
PsuI RGATCY 6 cut(s) 80, 124, 456, 751, 780, 883
PsyI GACNNNGTC 1 cut(s) 391
PvuII CAGCTG 1 cut(s) 970
RsaI GTAC 2 cut(s) 284, 941
RsaNI GTAC 2 cut(s) 283, 940
RseI CAYNNNNRTG 5 cut(s) 69, 275, 627, 1052, 1196
SapI GCTCTTC 1 cut(s) 95
SaqAI TTAA 6 cut(s) 180, 1001, 1026, 1151, 1175, 1291
SatI GCNGC 4 cut(s) 30, 378, 920, 923
Sau96I GGNCC 2 cut(s) 316, 480
SchI GAGTC 4 cut(s) 43, 382, 834, 1015
ScrFI CCNGG 2 cut(s) 447, 478
SduI GDGCHC 4 cut(s) 272, 634, 967, 1113
SexAI ACCWGGT 1 cut(s) 476
SfaNI GCATC 2 cut(s) 496, 754
SfcI CTRYAG 3 cut(s) 378, 657, 1141
SfuI TTCGAA 1 cut(s) 35
SinI GGWCC 2 cut(s) 316, 480
SmiMI CAYNNNNRTG 5 cut(s) 69, 275, 627, 1052, 1196
SmlI CTYRAG 1 cut(s) 1079
SmoI CTYRAG 1 cut(s) 1079
Sse9I AATT 4 cut(s) 353, 372, 810, 914
SsiI CCGC 1 cut(s) 1171
SspMI CTAG 4 cut(s) 165, 744, 926, 930
StyD4I CCNGG 2 cut(s) 445, 476
StyI CCWWGG 2 cut(s) 552, 733
TaaI ACNGT 1 cut(s) 1145
TaiI ACGT 3 cut(s) 439, 1116, 1248
TaqI TCGA 2 cut(s) 35, 720
TasI AATT 4 cut(s) 353, 372, 810, 914
TatI WGTACW 1 cut(s) 939
Tru1I TTAA 6 cut(s) 180, 1001, 1026, 1151, 1175, 1291
Tru9I TTAA 6 cut(s) 180, 1001, 1026, 1151, 1175, 1291
TscAI CASTG 3 cut(s) 406, 874, 1150
TseFI GTSAC 1 cut(s) 1276
TseI GCWGC 4 cut(s) 29, 377, 919, 922
Tsp45I GTSAC 1 cut(s) 1276
TspDTI ATGAA 4 cut(s) 81, 265, 611, 1287
TspRI CASTG 3 cut(s) 406, 874, 1150
Tth111I GACNNNGTC 1 cut(s) 391
Van91I CCANNNNNTGG 1 cut(s) 856
VpaK11BI GGWCC 2 cut(s) 316, 480
XagI CCTNNNNNAGG 1 cut(s) 294
XapI RAATTY 2 cut(s) 353, 810
XmiI GTMKAC 1 cut(s) 651
XmnI GAANNNNTTC 1 cut(s) 150
XspI CTAG 4 cut(s) 165, 744, 926, 930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.