pycom17g26460

Aspartate aminotransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
24744740 .. 24750408
5669 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g26460.4

Sequence Viewer

Length: 1263 bp
ATGGCGCTTTCCCGGAAACTTGTTCAGCAGCGGAGTTCCGTATTCGGAAGCCGATCCATGTCGTGGTGGCGGAGCGTCGAGCCGGCTCCTAAGGATCCGATTCTCGGTGTCACCGAGGCTTTCCTCGCCGATCCAAGTCCCGATAAAGTCAATGTTGGAGTGGGTGCGTATCGAGATGATAATGGAAAGCCAGTTGTTCTGGAATGCGTTAGAGAAGCCGAGCGGAGGATTGCCGGAAACTTAAACATGGAGTATCTTCCTATGGGGGGAAGTGTGAAGAAGGTGGAAGAAACATTGAAGCTAGCATATGGGGAGAATTCGGAGCACATCAAAGATAAAAGGATAGCAGCAGTGCAAACTCTCTCTGGAACGGGTGCATGCCGTCTTTTTGCAGACTTTCAAAAGCGTTTTCGTCCCGAGTCTCAAATCTATATACCAGTGCCAACATGGGCCAACCATCATAACATCTGGAGAGATGCTCACGTCCCCCAAAAGACATTCCATTACTATCATCCAGAAACGAAGGGGTTGGACTTTGCAGGACTGGTCGATGACATAAAGAATGCTCCAAACGGCTCATTCTTTCTACTTCATGCCTGTGCTCACAATCCCACTGGAGTGGATCCTTCAGAGGAACAGTGGAAAGAGATTTCAAAACTGATCAAGGAAAAGGGACATTTCCCCTTCTTTGACATGGCATATCAAGGCTTTGCTAGCGGTGACCCAGAGAGAGACGCAAAAGCCATCAGGATTTTCCTTGAGGATTGTCATCTAATTGGAATTGCTCAATCATATGCCAAAAACATGGGACTCTATGGCCAGAGAGTAGGATGTCTTAGCATGCTTTGTGAGGATGAAAAACAAGCCGTGGCAGTAAAAAGCCAGTTGCAGATGCTTGCCAGGCCCATGTATAGTAACCCACCTGTTCATGGAGCGCTTATAGTTTCAACTATCCTTGGTGATCAAGAATTGAAAACTTTATGGCTGAAGGAAGTTAAGGGCATGGCAGATCGCATCATTGGAATGAGAACTGCTCTACGAGAAAATCTTGAGAAACTAGGGTCACCCTTATCGTGGGAGCACATAACAAATCAGATAGGTATGTTTTGCTACAGCGGGATGACACCTGAACAGGTTGATCGCTTGACAAATGAATTTCATATCTATATGACTCGCAATGGTCGTATAAGCATGGCCGGTGTTACAACGGGCAATGTTGGATATCTAGCAAATGCTATACATGAAGTCACAAAATCAACATAG

Protein Analysis

421

Amino Acids

47.03

Weight (kDa)

7.66

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 63
AccBSI CCGCTC 1 cut(s) 223
AciI CCGC 5 cut(s) 31, 70, 223, 717, 1116
AclWI GGATC 6 cut(s) 48, 89, 102, 125, 617, 630
AcoI YGGCCR 2 cut(s) 817, 1194
AcsI RAATTY 2 cut(s) 316, 1154
AcuI CTGAAG 2 cut(s) 612, 1007
AfeI AGCGCT 1 cut(s) 936
AfiI CCNNNNNNNGG 6 cut(s) 63, 104, 225, 266, 929, 1074
AgsI TTSAA 5 cut(s) 298, 401, 654, 948, 973
AjiI CACGTC 1 cut(s) 484
AjnI CCWGG 1 cut(s) 899
AleI CACNNNNGTG 1 cut(s) 617
AluBI AGCT 1 cut(s) 301
AluI AGCT 1 cut(s) 301
Alw21I GWGCWC 3 cut(s) 327, 604, 1083
Alw26I GTCTC 2 cut(s) 426, 726
AlwI GGATC 6 cut(s) 48, 89, 102, 125, 617, 630
Ama87I CYCGRG 1 cut(s) 416
Aor51HI AGCGCT 1 cut(s) 936
AoxI GGCC 4 cut(s) 450, 817, 902, 1194
ApeKI GCWGC 2 cut(s) 28, 347
ApoI RAATTY 2 cut(s) 316, 1154
AspLEI GCGC 2 cut(s) 7, 937
AspS9I GGNCC 2 cut(s) 450, 903
AsuC2I CCSGG 1 cut(s) 13
AsuHPI GGTGA 4 cut(s) 103, 731, 971, 1056
AsuNHI GCTAGC 2 cut(s) 301, 713
AvaI CYCGRG 1 cut(s) 416
AxyI CCTNAGG 1 cut(s) 90
BalI TGGCCA 1 cut(s) 819
BamHI GGATCC 2 cut(s) 94, 622
Bbv12I GWGCWC 3 cut(s) 327, 604, 1083
BbvI GCAGC 2 cut(s) 40, 359
BccI CCATC 2 cut(s) 465, 752
BceAI ACGGC 3 cut(s) 366, 589, 851
BciT130I CCWGG 1 cut(s) 901
BclI TGATCA 2 cut(s) 660, 961
BcnI CCSGG 1 cut(s) 13
BcoDI GTCTC 2 cut(s) 426, 726
BfaI CTAG 4 cut(s) 302, 714, 1058, 1226
BfmI CTRYAG 1 cut(s) 1111
BfoI RGCGCY 2 cut(s) 8, 938
BisI GCNGC 2 cut(s) 29, 348
BlsI GCNGC 2 cut(s) 30, 349
Bme1390I CCNGG 2 cut(s) 13, 901
BmeT110I CYCGRG 1 cut(s) 416
BmgBI CACGTC 1 cut(s) 484
BmgT120I GGNCC 2 cut(s) 450, 903
BmiI GGNNCC 3 cut(s) 87, 96, 624
BmrFI CCNGG 2 cut(s) 13, 901
BmsI GCATC 3 cut(s) 466, 882, 1023
BmtI GCTAGC 2 cut(s) 305, 717
BplI GAGNNNNNCTC 4 cut(s) 463, 495, 1018, 1050
BpmI CTGGAG 2 cut(s) 490, 636
BpuEI CTTGAG 2 cut(s) 779, 1070
BpuMI CCSGG 1 cut(s) 13
BsaBI GATNNNNATC 1 cut(s) 768
BsaJI CCNNGG 3 cut(s) 114, 867, 955
Bsc4I CCNNNNNNNGG 6 cut(s) 63, 104, 225, 266, 929, 1074
Bse118I RCCGGY 2 cut(s) 82, 1196
Bse1I ACTGG 5 cut(s) 191, 437, 549, 619, 883
Bse21I CCTNAGG 1 cut(s) 90
Bse3DI GCAATG 2 cut(s) 1183, 1219
Bse8I GATNNNNATC 1 cut(s) 768
BseBI CCWGG 1 cut(s) 901
BseDI CCNNGG 3 cut(s) 114, 867, 955
BseGI GGATG 4 cut(s) 511, 836, 859, 1125
BseJI GATNNNNATC 1 cut(s) 768
BseLI CCNNNNNNNGG 6 cut(s) 63, 104, 225, 266, 929, 1074
BseMI GCAATG 2 cut(s) 1183, 1219
BseNI ACTGG 5 cut(s) 191, 437, 549, 619, 883
BseXI GCAGC 2 cut(s) 40, 359
BshFI GGCC 4 cut(s) 452, 819, 904, 1196
BsiHKAI GWGCWC 3 cut(s) 327, 604, 1083
BsiHKCI CYCGRG 1 cut(s) 416
BsiSI CCGG 4 cut(s) 13, 83, 234, 1197
BslFI GGGAC 5 cut(s) 123, 399, 470, 687, 822
BslI CCNNNNNNNGG 6 cut(s) 63, 104, 225, 266, 929, 1074
BsmAI GTCTC 2 cut(s) 426, 726
BsmBI CGTCTC 1 cut(s) 726
BsmFI GGGAC 5 cut(s) 123, 399, 470, 687, 822
BsmI GAATGC 2 cut(s) 209, 568
BsnI GGCC 4 cut(s) 452, 819, 904, 1196
BsoBI CYCGRG 1 cut(s) 416
Bsp1286I GDGCHC 3 cut(s) 327, 604, 1083
Bsp143I GATC 8 cut(s) 53, 94, 130, 622, 660, 961, 1009, 1138
BspACI CCGC 5 cut(s) 31, 70, 223, 717, 1116
BspANI GGCC 4 cut(s) 452, 819, 904, 1196
BspLI GGNNCC 3 cut(s) 87, 96, 624
BspOI GCTAGC 2 cut(s) 305, 717
BspPI GGATC 6 cut(s) 48, 89, 102, 125, 617, 630
BsrBI CCGCTC 1 cut(s) 223
BsrDI GCAATG 2 cut(s) 1183, 1219
BsrFI RCCGGY 2 cut(s) 82, 1196
BsrI ACTGG 5 cut(s) 191, 437, 549, 619, 883
BssAI RCCGGY 2 cut(s) 82, 1196
BssECI CCNNGG 3 cut(s) 114, 867, 955
BssMI GATC 8 cut(s) 53, 94, 130, 622, 660, 961, 1009, 1138
BssT1I CCWWGG 1 cut(s) 955
Bst2UI CCWGG 1 cut(s) 901
Bst4CI ACNGT 1 cut(s) 639
BstC8I GCNNGC 6 cut(s) 84, 303, 379, 715, 842, 897
BstDEI CTNAG 2 cut(s) 90, 836
BstDSI CCRYGG 1 cut(s) 867
BstEII GGTNACC 2 cut(s) 719, 1062
BstF5I GGATG 4 cut(s) 511, 836, 859, 1125
BstH2I RGCGCY 2 cut(s) 8, 938
BstHHI GCGC 2 cut(s) 7, 937
BstKTI GATC 8 cut(s) 56, 97, 133, 625, 663, 964, 1012, 1141
BstMAI GTCTC 2 cut(s) 426, 726
BstMBI GATC 8 cut(s) 53, 94, 130, 622, 660, 961, 1009, 1138
BstMWI GCNNNNNNNGC 3 cut(s) 125, 714, 901
BstNI CCWGG 1 cut(s) 901
BstNSI RCATGY 2 cut(s) 381, 844
BstPI GGTNACC 2 cut(s) 719, 1062
BstSCI CCNGG 2 cut(s) 11, 899
BstSFI CTRYAG 1 cut(s) 1111
BstV1I GCAGC 2 cut(s) 40, 359
BstX2I RGATCY 2 cut(s) 94, 622
BstXI CCANNNNNNTGG 2 cut(s) 619, 805
BstYI RGATCY 2 cut(s) 94, 622
Bsu36I CCTNAGG 1 cut(s) 90
BsuRI GGCC 4 cut(s) 452, 819, 904, 1196
BtgI CCRYGG 1 cut(s) 867
BtrI CACGTC 1 cut(s) 484
BtsCI GGATG 4 cut(s) 511, 836, 859, 1125
BtsI GCAGTG 1 cut(s) 357
BtsIMutI CAGTG 4 cut(s) 357, 444, 612, 644
Cac8I GCNNGC 6 cut(s) 84, 303, 379, 715, 842, 897
CfoI GCGC 2 cut(s) 7, 937
Cfr10I RCCGGY 2 cut(s) 82, 1196
Cfr13I GGNCC 2 cut(s) 450, 903
CseI GACGC 2 cut(s) 64, 743
DdeI CTNAG 2 cut(s) 90, 836
DpnI GATC 8 cut(s) 55, 96, 132, 624, 662, 963, 1011, 1140
DpnII GATC 8 cut(s) 53, 94, 130, 622, 660, 961, 1009, 1138
EaeI YGGCCR 2 cut(s) 817, 1194
EciI GGCGGA 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 955
Eco32I GATATC 1 cut(s) 1223
Eco47III AGCGCT 1 cut(s) 936
Eco57I CTGAAG 2 cut(s) 612, 1007
Eco81I CCTNAGG 1 cut(s) 90
Eco88I CYCGRG 1 cut(s) 416
Eco91I GGTNACC 2 cut(s) 719, 1062
EcoO65I GGTNACC 2 cut(s) 719, 1062
EcoRI GAATTC 1 cut(s) 316
EcoRII CCWGG 1 cut(s) 899
EcoRV GATATC 1 cut(s) 1223
EcoT14I CCWWGG 1 cut(s) 955
ErhI CCWWGG 1 cut(s) 955
Esp3I CGTCTC 1 cut(s) 726
FaqI GGGAC 5 cut(s) 123, 399, 470, 687, 822
FauI CCCGC 1 cut(s) 1109
FauNDI CATATG 2 cut(s) 307, 793
FbaI TGATCA 2 cut(s) 660, 961
Fnu4HI GCNGC 2 cut(s) 29, 348
FokI GGATG 4 cut(s) 498, 843, 866, 1132
Fsp4HI GCNGC 2 cut(s) 29, 348
FspBI CTAG 4 cut(s) 302, 714, 1058, 1226
GlaI GCGC 2 cut(s) 6, 936
GluI GCNGC 2 cut(s) 29, 348
GsuI CTGGAG 2 cut(s) 490, 636
HaeII RGCGCY 2 cut(s) 8, 938
HaeIII GGCC 4 cut(s) 452, 819, 904, 1196
HapII CCGG 4 cut(s) 13, 83, 234, 1197
HgaI GACGC 2 cut(s) 64, 743
HhaI GCGC 2 cut(s) 7, 937
Hin6I GCGC 2 cut(s) 5, 935
HinP1I GCGC 2 cut(s) 5, 935
HinfI GANTC 4 cut(s) 100, 419, 810, 1171
HpaII CCGG 4 cut(s) 13, 83, 234, 1197
HphI GGTGA 4 cut(s) 103, 731, 971, 1056
Hpy188I TCNGA 5 cut(s) 47, 99, 322, 631, 1095
Hpy99I CGWCG 1 cut(s) 80
HpyAV CCTTC 5 cut(s) 274, 517, 636, 694, 982
HpyCH4III ACNGT 1 cut(s) 639
HpyCH4IV ACGT 1 cut(s) 483
HpyCH4V TGCA 5 cut(s) 355, 377, 392, 539, 889
HpyF10VI GCNNNNNNNGC 3 cut(s) 125, 714, 901
HpyF3I CTNAG 2 cut(s) 90, 836
HpySE526I ACGT 1 cut(s) 483
HspAI GCGC 2 cut(s) 5, 935
KroI GCCGGC 1 cut(s) 82
KroNI GCCGGC 1 cut(s) 84
Ksp22I TGATCA 2 cut(s) 660, 961
Kzo9I GATC 8 cut(s) 53, 94, 130, 622, 660, 961, 1009, 1138
LmnI GCTCC 6 cut(s) 72, 91, 322, 571, 932, 1078
Lsp1109I GCAGC 2 cut(s) 40, 359
LweI GCATC 3 cut(s) 466, 882, 1023
MaeI CTAG 4 cut(s) 302, 714, 1058, 1226
MaeII ACGT 1 cut(s) 483
MaeIII GTNAC 6 cut(s) 109, 719, 914, 1062, 1201, 1246
MalI GATC 8 cut(s) 55, 96, 132, 624, 662, 963, 1011, 1140
MbiI CCGCTC 1 cut(s) 223
MboI GATC 8 cut(s) 53, 94, 130, 622, 660, 961, 1009, 1138
MboII GAAGA 3 cut(s) 248, 289, 299
MflI RGATCY 2 cut(s) 94, 622
MhlI GDGCHC 3 cut(s) 327, 604, 1083
MlsI TGGCCA 1 cut(s) 819
MluCI AATT 5 cut(s) 316, 774, 780, 968, 1154
MluNI TGGCCA 1 cut(s) 819
MlyI GAGTC 3 cut(s) 428, 804, 1165
MmeI TCCRAC 3 cut(s) 136, 510, 1198
MnlI CCTC 6 cut(s) 109, 134, 219, 625, 754, 844
Mox20I TGGCCA 1 cut(s) 819
MroNI GCCGGC 1 cut(s) 82
MscI TGGCCA 1 cut(s) 819
MseI TTAA 2 cut(s) 242, 996
MslI CAYNNNNRTG 3 cut(s) 597, 617, 1022
Msp20I TGGCCA 1 cut(s) 819
MspA1I CMGCKG 2 cut(s) 31, 1116
MspI CCGG 4 cut(s) 13, 83, 234, 1197
MspR9I CCNGG 2 cut(s) 13, 901
Mva1269I GAATGC 2 cut(s) 209, 568
MvaI CCWGG 1 cut(s) 901
MwoI GCNNNNNNNGC 3 cut(s) 125, 714, 901
NaeI GCCGGC 1 cut(s) 84
NciI CCSGG 1 cut(s) 13
NdeI CATATG 2 cut(s) 307, 793
NdeII GATC 8 cut(s) 53, 94, 130, 622, 660, 961, 1009, 1138
NgoMIV GCCGGC 1 cut(s) 82
NheI GCTAGC 2 cut(s) 301, 713
NlaIV GGNNCC 3 cut(s) 87, 96, 624
NmeAIII GCCGAG 1 cut(s) 244
NmuCI GTSAC 4 cut(s) 109, 719, 1062, 1246
NspI RCATGY 2 cut(s) 381, 844
OliI CACNNNNGTG 1 cut(s) 617
PaeI GCATGC 2 cut(s) 381, 844
PcsI WCGNNNNNNNCGW 2 cut(s) 111, 1180
PctI GAATGC 2 cut(s) 209, 568
PdiI GCCGGC 1 cut(s) 84
PfeI GAWTC 1 cut(s) 100
PflMI CCANNNNNTGG 1 cut(s) 63
PfoI TCCNGGA 1 cut(s) 11
PkrI GCNGC 2 cut(s) 30, 349
PleI GAGTC 3 cut(s) 427, 804, 1165
PpsI GAGTC 3 cut(s) 427, 804, 1165
Psp6I CCWGG 1 cut(s) 899
PspEI GGTNACC 2 cut(s) 719, 1062
PspGI CCWGG 1 cut(s) 899
PspN4I GGNNCC 3 cut(s) 87, 96, 624
PspPI GGNCC 2 cut(s) 450, 903
PsuI RGATCY 2 cut(s) 94, 622
RseI CAYNNNNRTG 3 cut(s) 597, 617, 1022
SaqAI TTAA 2 cut(s) 242, 996
SatI GCNGC 2 cut(s) 29, 348
Sau3AI GATC 8 cut(s) 53, 94, 130, 622, 660, 961, 1009, 1138
Sau96I GGNCC 2 cut(s) 450, 903
SchI GAGTC 3 cut(s) 428, 804, 1165
ScrFI CCNGG 2 cut(s) 13, 901
SduI GDGCHC 3 cut(s) 327, 604, 1083
SetI ASST 7 cut(s) 285, 303, 486, 925, 1102, 1129, 1137
SfaNI GCATC 3 cut(s) 466, 882, 1023
SfcI CTRYAG 1 cut(s) 1111
SmiMI CAYNNNNRTG 3 cut(s) 597, 617, 1022
SmlI CTYRAG 2 cut(s) 758, 1049
SmoI CTYRAG 2 cut(s) 758, 1049
SphI GCATGC 2 cut(s) 381, 844
Sse9I AATT 5 cut(s) 316, 774, 780, 968, 1154
SsiI CCGC 5 cut(s) 31, 70, 223, 717, 1116
SspMI CTAG 4 cut(s) 302, 714, 1058, 1226
StyD4I CCNGG 2 cut(s) 11, 899
StyI CCWWGG 1 cut(s) 955
TaaI ACNGT 1 cut(s) 639
TaiI ACGT 1 cut(s) 486
TaqI TCGA 3 cut(s) 78, 172, 549
TasI AATT 5 cut(s) 316, 774, 780, 968, 1154
TfiI GAWTC 1 cut(s) 100
Tru1I TTAA 2 cut(s) 242, 996
Tru9I TTAA 2 cut(s) 242, 996
TscAI CASTG 4 cut(s) 357, 444, 619, 644
TseFI GTSAC 4 cut(s) 109, 719, 1062, 1246
TseI GCWGC 2 cut(s) 28, 347
Tsp45I GTSAC 4 cut(s) 109, 719, 1062, 1246
TspDTI ATGAA 6 cut(s) 581, 870, 917, 1148, 1167, 1257
TspGWI ACGGA 1 cut(s) 28
TspRI CASTG 4 cut(s) 357, 444, 619, 644
Van91I CCANNNNNTGG 1 cut(s) 63
XapI RAATTY 2 cut(s) 316, 1154
XceI RCATGY 2 cut(s) 381, 844
XcmI CCANNNNNNNNNTGG 1 cut(s) 444
XspI CTAG 4 cut(s) 302, 714, 1058, 1226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.