Prupe.3G115000_v2.0.a1

Aspartate aminotransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
9716994 .. 9723683
6690 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G115000.1

Sequence Viewer

Length: 1269 bp
ATGGCGCTTTCCAGAAAACTTTTTCAGCACCGGAGCTCCGTATCCTTCTTCGGAGCCCGATCCATGTCGTGGTGGAGGAGCGTGGAGCCAGCTCCAAAGGATCCGATTCTCGGCGTCACAGAGGCCTTCCTCGCCGATCCAAGTCCCGACAAAATCAATGTTGGAGTTGGTGCGTACCGAGATGATAAGGGCAAGCCAGTTGTTCTCGAATGCGTCAGAGAAGCAGAGCGGAGAATTGCGGGAAACTTGAACATGGAGTATCTTCCTATGGGAGGAAGTGTGAACATGGTTGAAGAAACATTGAAGCTGGCCTATGGGGAGAATTCTGAGCTCATTAAAGATAAAAGGATAGCAGCAGTGCAAGCTCTCTCGGGGACAGGTGCATGCCGTCTTTTTGCAGATTTTCAAAAGCGTTTTTGTCCAGATTCTCAAATCTATATACCAGTGCCTACATGGGCCAACCATCATAACATCTGGAGAGATGCTCATGTCCCTCAAAAGACTTTCCATTACTATCACCCACAGTCTAAGGGGTTGGACTTTGCAGGACTGGTTGACGACATAAAGAATGCTCCAAATGGCTCGTTCTTTCTACTTCATGCGTGTGCTCACAATCCTACTGGAGTGGATCCCTCAGAGGAACAATGGAAAGAGATCTCAAAAAAGATTAAGGAAAAGGGCCATTTTCCTTTCTTTGACATGGCATATCAAGGTTTTGCTAGTGGTGACCCGGAGAGAGATGCGAAAGCCATCAGGATTTTTCTTGAGGATGGCCATCTACTTGGAATTGCCCAATCATATGCCAAAAATATGGGACTTTATGGCCAGAGAGTAGGATGTCTTAGCGTGCTTTGTGAGGATGAAAAACAGGCAGTGGCTGTAAAAAGCCAGTTGCAGATGCTTGCCAGACCCATGTATAGTAATCCACCTGTTCATGGAGCGCTTATAGTTTCAACGATCCTTGGTGATCCAGGCTTGAAGAAGTTATGGCTCAAGGAAGTTAAGGGCATGGCAGATCGCATCATTGGAATGCGAACTGCTCTACGAGAGAACCTTGAGAAACTTGGGTCCCCCTTATCATGGGAGCACATAACTAATCAGATTGGTATGTTTTGCTATAGTGGAATGACACCTGAACAGGTTGATCGCTTGACAAATGAATTTCATATCTATATGACTCGCAATGGTCGAATAAGTATGGCGGGTGTTACAACCGGTAATGTTGGATATTTGGCAAATGCTATACATGAAGTCACAAAATCAGCATAG

Protein Analysis

423

Amino Acids

47.02

Weight (kDa)

8.34

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 69
AccBSI CCGCTC 1 cut(s) 229
AciI CCGC 3 cut(s) 229, 239, 1202
AclWI GGATC 8 cut(s) 54, 95, 108, 131, 623, 636, 952, 962
AcoI YGGCCR 2 cut(s) 772, 823
AcsI RAATTY 2 cut(s) 322, 1160
AcyI GRCGYC 1 cut(s) 114
AfaI GTAC 1 cut(s) 176
AfeI AGCGCT 1 cut(s) 942
AfiI CCNNNNNNNGG 5 cut(s) 69, 110, 272, 935, 1080
AgeI ACCGGT 1 cut(s) 1214
AgsI TTSAA 6 cut(s) 250, 293, 304, 407, 954, 979
AjnI CCWGG 1 cut(s) 970
AluBI AGCT 5 cut(s) 36, 92, 307, 331, 365
AluI AGCT 5 cut(s) 36, 92, 307, 331, 365
Alw21I GWGCWC 4 cut(s) 38, 333, 610, 1089
AlwI GGATC 8 cut(s) 54, 95, 108, 131, 623, 636, 952, 962
AlwNI CAGNNNCTG 1 cut(s) 878
Ama87I CYCGRG 1 cut(s) 370
Aor51HI AGCGCT 1 cut(s) 942
AoxI GGCC 6 cut(s) 123, 309, 456, 679, 772, 823
ApeKI GCWGC 1 cut(s) 353
ApoI RAATTY 2 cut(s) 322, 1160
AsiGI ACCGGT 1 cut(s) 1214
AspLEI GCGC 2 cut(s) 7, 943
AspS9I GGNCC 3 cut(s) 456, 679, 1068
AsuC2I CCSGG 1 cut(s) 731
AsuHPI GGTGA 3 cut(s) 509, 737, 977
AvaI CYCGRG 1 cut(s) 370
AvaII GGWCC 1 cut(s) 1068
BalI TGGCCA 2 cut(s) 774, 825
BamHI GGATCC 2 cut(s) 100, 628
BanII GRGCYC 3 cut(s) 38, 58, 333
Bbv12I GWGCWC 4 cut(s) 38, 333, 610, 1089
BbvI GCAGC 1 cut(s) 365
BccI CCATC 4 cut(s) 471, 758, 764, 783
BceAI ACGGC 1 cut(s) 372
BciT130I CCWGG 1 cut(s) 972
BciVI GTATCC 1 cut(s) 52
BcnI CCSGG 1 cut(s) 731
BfaI CTAG 1 cut(s) 720
BfmI CTRYAG 1 cut(s) 1117
BfoI RGCGCY 2 cut(s) 8, 944
BfuI GTATCC 1 cut(s) 52
BglII AGATCT 1 cut(s) 654
BisI GCNGC 1 cut(s) 354
BlsI GCNGC 1 cut(s) 355
Bme1390I CCNGG 2 cut(s) 731, 972
Bme18I GGWCC 1 cut(s) 1068
BmeT110I CYCGRG 1 cut(s) 370
BmgT120I GGNCC 3 cut(s) 456, 679, 1068
BmiI GGNNCC 6 cut(s) 55, 87, 102, 630, 1069, 1070
BmrFI CCNGG 2 cut(s) 731, 972
BmsI GCATC 4 cut(s) 472, 730, 888, 1029
BplI GAGNNNNNCTC 2 cut(s) 469, 501
BpmI CTGGAG 2 cut(s) 496, 642
BpuEI CTTGAG 3 cut(s) 785, 977, 1076
BpuMI CCSGG 1 cut(s) 731
BsaBI GATNNNNATC 1 cut(s) 774
BsaHI GRCGYC 1 cut(s) 114
BsaJI CCNNGG 1 cut(s) 961
BsaWI WCCGGW 2 cut(s) 30, 1214
BsaXI ACNNNNNCTCC 4 cut(s) 20, 50, 264, 294
Bsc4I CCNNNNNNNGG 5 cut(s) 69, 110, 272, 935, 1080
Bse118I RCCGGY 1 cut(s) 1214
Bse1I ACTGG 5 cut(s) 197, 443, 555, 625, 889
Bse3DI GCAATG 1 cut(s) 1189
Bse8I GATNNNNATC 1 cut(s) 774
BseBI CCWGG 1 cut(s) 972
BseDI CCNNGG 1 cut(s) 961
BseGI GGATG 3 cut(s) 775, 842, 865
BseJI GATNNNNATC 1 cut(s) 774
BseLI CCNNNNNNNGG 5 cut(s) 69, 110, 272, 935, 1080
BseMI GCAATG 1 cut(s) 1189
BseMII CTCAG 2 cut(s) 318, 648
BseNI ACTGG 5 cut(s) 197, 443, 555, 625, 889
BseRI GAGGAG 1 cut(s) 91
BseXI GCAGC 1 cut(s) 365
BshFI GGCC 6 cut(s) 125, 311, 458, 681, 774, 825
BshTI ACCGGT 1 cut(s) 1214
BsiHKAI GWGCWC 4 cut(s) 38, 333, 610, 1089
BsiHKCI CYCGRG 1 cut(s) 370
BsiSI CCGG 3 cut(s) 31, 731, 1215
BslFI GGGAC 5 cut(s) 129, 388, 476, 828, 1054
BslI CCNNNNNNNGG 5 cut(s) 69, 110, 272, 935, 1080
BsmFI GGGAC 5 cut(s) 129, 388, 476, 828, 1054
BsmI GAATGC 3 cut(s) 215, 574, 1035
BsnI GGCC 6 cut(s) 125, 311, 458, 681, 774, 825
BsoBI CYCGRG 1 cut(s) 370
Bsp1286I GDGCHC 5 cut(s) 38, 58, 333, 610, 1089
Bsp143I GATC 9 cut(s) 59, 100, 136, 628, 654, 957, 967, 1015, 1144
BspACI CCGC 3 cut(s) 229, 239, 1202
BspANI GGCC 6 cut(s) 125, 311, 458, 681, 774, 825
BspCNI CTCAG 2 cut(s) 319, 647
BspLI GGNNCC 6 cut(s) 55, 87, 102, 630, 1069, 1070
BspPI GGATC 8 cut(s) 54, 95, 108, 131, 623, 636, 952, 962
BsrBI CCGCTC 1 cut(s) 229
BsrDI GCAATG 1 cut(s) 1189
BsrFI RCCGGY 1 cut(s) 1214
BsrI ACTGG 5 cut(s) 197, 443, 555, 625, 889
BssAI RCCGGY 1 cut(s) 1214
BssECI CCNNGG 1 cut(s) 961
BssMI GATC 9 cut(s) 59, 100, 136, 628, 654, 957, 967, 1015, 1144
BssNI GRCGYC 1 cut(s) 114
BssT1I CCWWGG 1 cut(s) 961
Bst2UI CCWGG 1 cut(s) 972
Bst4CI ACNGT 1 cut(s) 525
BstACI GRCGYC 1 cut(s) 114
BstC8I GCNNGC 7 cut(s) 90, 194, 309, 363, 385, 848, 903
BstDEI CTNAG 4 cut(s) 327, 528, 634, 842
BstEII GGTNACC 1 cut(s) 725
BstENI CCTNNNNNAGG 1 cut(s) 270
BstF5I GGATG 3 cut(s) 775, 842, 865
BstH2I RGCGCY 2 cut(s) 8, 944
BstHHI GCGC 2 cut(s) 7, 943
BstKTI GATC 9 cut(s) 62, 103, 139, 631, 657, 960, 970, 1018, 1147
BstMBI GATC 9 cut(s) 59, 100, 136, 628, 654, 957, 967, 1015, 1144
BstMWI GCNNNNNNNGC 2 cut(s) 131, 362
BstNI CCWGG 1 cut(s) 972
BstNSI RCATGY 1 cut(s) 387
BstPI GGTNACC 1 cut(s) 725
BstSCI CCNGG 2 cut(s) 729, 970
BstSFI CTRYAG 1 cut(s) 1117
BstV1I GCAGC 1 cut(s) 365
BstX2I RGATCY 3 cut(s) 100, 628, 654
BstXI CCANNNNNNTGG 2 cut(s) 782, 811
BstYI RGATCY 3 cut(s) 100, 628, 654
BsuI GTATCC 1 cut(s) 52
BsuRI GGCC 6 cut(s) 125, 311, 458, 681, 774, 825
BtsCI GGATG 3 cut(s) 775, 842, 865
BtsI GCAGTG 2 cut(s) 363, 879
BtsIMutI CAGTG 3 cut(s) 363, 450, 879
Cac8I GCNNGC 7 cut(s) 90, 194, 309, 363, 385, 848, 903
CaiI CAGNNNCTG 1 cut(s) 878
CfoI GCGC 2 cut(s) 7, 943
Cfr10I RCCGGY 1 cut(s) 1214
Cfr13I GGNCC 3 cut(s) 456, 679, 1068
CseI GACGC 2 cut(s) 103, 202
Csp6I GTAC 1 cut(s) 175
CspAI ACCGGT 1 cut(s) 1214
CviQI GTAC 1 cut(s) 175
DdeI CTNAG 4 cut(s) 327, 528, 634, 842
DpnI GATC 9 cut(s) 61, 102, 138, 630, 656, 959, 969, 1017, 1146
DpnII GATC 9 cut(s) 59, 100, 136, 628, 654, 957, 967, 1015, 1144
EaeI YGGCCR 2 cut(s) 772, 823
Ecl136II GAGCTC 2 cut(s) 36, 331
Eco130I CCWWGG 1 cut(s) 961
Eco147I AGGCCT 1 cut(s) 125
Eco24I GRGCYC 3 cut(s) 38, 58, 333
Eco47I GGWCC 1 cut(s) 1068
Eco47III AGCGCT 1 cut(s) 942
Eco53kI GAGCTC 2 cut(s) 36, 331
Eco88I CYCGRG 1 cut(s) 370
Eco91I GGTNACC 1 cut(s) 725
EcoICRI GAGCTC 2 cut(s) 36, 331
EcoNI CCTNNNNNAGG 1 cut(s) 270
EcoO109I RGGNCCY 1 cut(s) 1068
EcoO65I GGTNACC 1 cut(s) 725
EcoRI GAATTC 1 cut(s) 322
EcoRII CCWGG 1 cut(s) 970
EcoT14I CCWWGG 1 cut(s) 961
EcoT38I GRGCYC 3 cut(s) 38, 58, 333
ErhI CCWWGG 1 cut(s) 961
FaqI GGGAC 5 cut(s) 129, 388, 476, 828, 1054
FauI CCCGC 2 cut(s) 232, 1195
FauNDI CATATG 1 cut(s) 799
Fnu4HI GCNGC 1 cut(s) 354
FokI GGATG 3 cut(s) 782, 849, 872
FriOI GRGCYC 3 cut(s) 38, 58, 333
Fsp4HI GCNGC 1 cut(s) 354
FspBI CTAG 1 cut(s) 720
GlaI GCGC 2 cut(s) 6, 942
GluI GCNGC 1 cut(s) 354
GsuI CTGGAG 2 cut(s) 496, 642
HaeII RGCGCY 2 cut(s) 8, 944
HaeIII GGCC 6 cut(s) 125, 311, 458, 681, 774, 825
HapII CCGG 3 cut(s) 31, 731, 1215
HgaI GACGC 2 cut(s) 103, 202
HhaI GCGC 2 cut(s) 7, 943
Hin1I GRCGYC 1 cut(s) 114
Hin6I GCGC 2 cut(s) 5, 941
HinP1I GCGC 2 cut(s) 5, 941
HincII GTYRAC 1 cut(s) 556
HindII GTYRAC 1 cut(s) 556
HinfI GANTC 3 cut(s) 106, 425, 1177
HpaII CCGG 3 cut(s) 31, 731, 1215
HphI GGTGA 3 cut(s) 509, 737, 977
Hpy166II GTNNAC 2 cut(s) 283, 556
Hpy188I TCNGA 6 cut(s) 53, 105, 218, 328, 637, 1101
Hpy188III TCNNGA 7 cut(s) 12, 146, 206, 422, 475, 754, 764
Hpy8I GTNNAC 2 cut(s) 283, 556
HpyAV CCTTC 2 cut(s) 55, 136
HpyCH4III ACNGT 1 cut(s) 525
HpyCH4V TGCA 5 cut(s) 361, 383, 398, 545, 895
HpyF10VI GCNNNNNNNGC 2 cut(s) 131, 362
HpyF3I CTNAG 4 cut(s) 327, 528, 634, 842
Hsp92I GRCGYC 1 cut(s) 114
HspAI GCGC 2 cut(s) 5, 941
KflI GGGWCCC 1 cut(s) 1068
Kzo9I GATC 9 cut(s) 59, 100, 136, 628, 654, 957, 967, 1015, 1144
LmnI GCTCC 9 cut(s) 33, 41, 53, 78, 85, 97, 577, 938, 1084
Lsp1109I GCAGC 1 cut(s) 365
LweI GCATC 4 cut(s) 472, 730, 888, 1029
MaeI CTAG 1 cut(s) 720
MaeIII GTNAC 4 cut(s) 115, 725, 1207, 1252
MalI GATC 9 cut(s) 61, 102, 138, 630, 656, 959, 969, 1017, 1146
MbiI CCGCTC 1 cut(s) 229
MboI GATC 9 cut(s) 59, 100, 136, 628, 654, 957, 967, 1015, 1144
MboII GAAGA 4 cut(s) 40, 254, 305, 991
MflI RGATCY 3 cut(s) 100, 628, 654
MhlI GDGCHC 5 cut(s) 38, 58, 333, 610, 1089
MlsI TGGCCA 2 cut(s) 774, 825
MluCI AATT 4 cut(s) 234, 322, 786, 1160
MluNI TGGCCA 2 cut(s) 774, 825
MlyI GAGTC 1 cut(s) 1171
MmeI TCCRAC 3 cut(s) 142, 516, 1204
MnlI CCTC 9 cut(s) 69, 115, 140, 266, 504, 631, 643, 760, 850
Mox20I TGGCCA 2 cut(s) 774, 825
MscI TGGCCA 2 cut(s) 774, 825
MseI TTAA 3 cut(s) 336, 669, 1002
MslI CAYNNNNRTG 2 cut(s) 603, 1028
Msp20I TGGCCA 2 cut(s) 774, 825
MspI CCGG 3 cut(s) 31, 731, 1215
MspR9I CCNGG 2 cut(s) 731, 972
Mva1269I GAATGC 3 cut(s) 215, 574, 1035
MvaI CCWGG 1 cut(s) 972
MwoI GCNNNNNNNGC 2 cut(s) 131, 362
NciI CCSGG 1 cut(s) 731
NdeI CATATG 1 cut(s) 799
NdeII GATC 9 cut(s) 59, 100, 136, 628, 654, 957, 967, 1015, 1144
NlaIV GGNNCC 6 cut(s) 55, 87, 102, 630, 1069, 1070
NmeAIII GCCGAG 1 cut(s) 90
NmuCI GTSAC 3 cut(s) 115, 725, 1252
NspI RCATGY 1 cut(s) 387
PaeI GCATGC 1 cut(s) 387
PceI AGGCCT 1 cut(s) 125
PcsI WCGNNNNNNNCGW 1 cut(s) 1186
PctI GAATGC 3 cut(s) 215, 574, 1035
PfeI GAWTC 2 cut(s) 106, 425
PflMI CCANNNNNTGG 1 cut(s) 69
PinAI ACCGGT 1 cut(s) 1214
PkrI GCNGC 1 cut(s) 355
PleI GAGTC 1 cut(s) 1171
PpsI GAGTC 1 cut(s) 1171
PpuMI RGGWCCY 1 cut(s) 1068
Psp124BI GAGCTC 2 cut(s) 38, 333
Psp5II RGGWCCY 1 cut(s) 1068
Psp6I CCWGG 1 cut(s) 970
PspEI GGTNACC 1 cut(s) 725
PspGI CCWGG 1 cut(s) 970
PspN4I GGNNCC 6 cut(s) 55, 87, 102, 630, 1069, 1070
PspPI GGNCC 3 cut(s) 456, 679, 1068
PspPPI RGGWCCY 1 cut(s) 1068
PstNI CAGNNNCTG 1 cut(s) 878
PsuI RGATCY 3 cut(s) 100, 628, 654
RsaI GTAC 1 cut(s) 176
RsaNI GTAC 1 cut(s) 175
RseI CAYNNNNRTG 2 cut(s) 603, 1028
SacI GAGCTC 2 cut(s) 38, 333
SaqAI TTAA 3 cut(s) 336, 669, 1002
SatI GCNGC 1 cut(s) 354
Sau3AI GATC 9 cut(s) 59, 100, 136, 628, 654, 957, 967, 1015, 1144
Sau96I GGNCC 3 cut(s) 456, 679, 1068
SchI GAGTC 1 cut(s) 1171
ScrFI CCNGG 2 cut(s) 731, 972
SduI GDGCHC 5 cut(s) 38, 58, 333, 610, 1089
SfaNI GCATC 4 cut(s) 472, 730, 888, 1029
SfcI CTRYAG 1 cut(s) 1117
SinI GGWCC 1 cut(s) 1068
SmiMI CAYNNNNRTG 2 cut(s) 603, 1028
SmlI CTYRAG 3 cut(s) 764, 992, 1055
SmoI CTYRAG 3 cut(s) 764, 992, 1055
SphI GCATGC 1 cut(s) 387
Sse9I AATT 4 cut(s) 234, 322, 786, 1160
SseBI AGGCCT 1 cut(s) 125
SsiI CCGC 3 cut(s) 229, 239, 1202
SspMI CTAG 1 cut(s) 720
SstI GAGCTC 2 cut(s) 38, 333
StuI AGGCCT 1 cut(s) 125
StyD4I CCNGG 2 cut(s) 729, 970
StyI CCWWGG 1 cut(s) 961
TaaI ACNGT 1 cut(s) 525
TaqI TCGA 2 cut(s) 207, 1189
TasI AATT 4 cut(s) 234, 322, 786, 1160
TfiI GAWTC 2 cut(s) 106, 425
Tru1I TTAA 3 cut(s) 336, 669, 1002
Tru9I TTAA 3 cut(s) 336, 669, 1002
TscAI CASTG 3 cut(s) 363, 450, 879
TseFI GTSAC 3 cut(s) 115, 725, 1252
TseI GCWGC 1 cut(s) 353
Tsp45I GTSAC 3 cut(s) 115, 725, 1252
TspDTI ATGAA 6 cut(s) 587, 876, 923, 1154, 1173, 1263
TspGWI ACGGA 1 cut(s) 28
TspRI CASTG 3 cut(s) 363, 450, 879
Van91I CCANNNNNTGG 1 cut(s) 69
VpaK11BI GGWCC 1 cut(s) 1068
XagI CCTNNNNNAGG 1 cut(s) 270
XapI RAATTY 2 cut(s) 322, 1160
XceI RCATGY 1 cut(s) 387
XcmI CCANNNNNNNNNTGG 1 cut(s) 450
XspI CTAG 1 cut(s) 720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.