AT2G34190

Xanthine uracil permease family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0008195
Physical Location & Seq
Forward (+)
14436589 .. 14439596
3008 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G34190.1

Sequence Viewer

Length: 1575 bp
ATGGATCTTGTAAAGCCAGAGGAGATAAGTCACCCACCAATGGATCAGCTTCAGGGTTTAGAGTACTGTATTGACTCAAACCCTCCATGGGGAGAAGCTATAGCTTTAGGTTTCGAGCATTACATTCTGGCTTTAGGAACTGCAGTGATGATACCTTCAATTCTTGTTCCTATGATGGGTGGAGATGATGGTGATAAAGTGAGAGTTGTTCAGACACTACTGTTCCTTCAAGGTGTTAACACTCTTCTTCAAACATTATTTGGAACTCGTCTTCCAACTGTCATTGGAGGCTCATATGCATTCATGGTTCCAATCATTTCAATCATCCATGACTCTTCTTTGACCCGTATCGAAGATCCACAATTGAGATTTCTAAGTACAATGAGAGCGGTACAAGGCGCGATCATAGTTGCATCCAGCGTTCAAATTATCCTCGGTTTCAGCCAAATGTGGGCTATCTGTTCAAGATTCTTTAGTCCTATTGGTATGGTTCCTGTTATTGCATTAACAGGTTTTGGACTCTTCAACAGAGGATTCCCAGTGGTGGGTAATTGTGTTGAGATAGGACTCCCCATGCTTATTCTCTTTGTCATCTTCTCTCAGTATCTGAAGAACTTTCAGTTCAGGCAATTCCCAGTAGTGGAGAGATTTGCTCTTATTATAGCGCTTATCATCGTGTGGGCTTACGCGCATGTCTTGACCGCCAGTGGGGCTTACAAACACCGACCACACCAGACACAATTAAACTGCAGAACGGATATGTCTAACCTCATTTCATCTGCTCCTTGGATCAAGATTCCTTATCCACTTCAATGGGGAGCACCTAGCTTTGATGCTGGTCATGCTTTTGCTATGATGGCCGCTGTTTTAGTCTCACTCATTGAGTCAACTGGAGCTTTCAAAGCTGCTGCACGACTGGCTAGCGCTACGCCTCCTCCACCTCATGTTCTTAGCCGTGGAATAGGCTGGCAAGGCATTGGGATCCTCTTAAACGGTTTATTTGGAACACTAAGCGGTTCAAGTGTCTCTGTAGAGAACATTGGATTACTAGGAAGCACCAGAGTTGGAAGCCGCAGAGTTATCCAAATCTCAGCAGGATTTATGATATTCTTCTCAATGCTAGGCAAATTCGGGGCATTGTTCGCTTCAATACCTTTCACGATATTTGCAGCTGTGTACTGCGTCTTGTTTGGTCTTGTTGCTTCAGTTGGACTCTCTTTTCTGCAATTCACAAACATGAACTCTCTGAGAAATCTCTTCATCGTCGGTGTGTCTCTCTTCTTAGGATTATCGATCCCCGAATACTTCAGAGATTTCAGCATGAAAGCATTACACGGCCCAGCTCACACCAATGCTGGTTGGTTCAATGATTTCTTGAACACAATCTTCTTATCTTCACCAATGGTCGCACTGATGGTGGCAGTGTTCTTGGACAACACTCTGGACTATAAAGAGACCGCGAGAGACAGAGGATTGCCTTGGTGGGCTAAGTTCAGAACTTTCAAAGGAGATAGCAGGAATGAGGAATTCTACACTCTCCCTTTCAACCTCAACCGTTTCTTCCCTCCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Xan_ur_permease

Protein Analysis

524

Amino Acids

57.61

Weight (kDa)

8.76

Isoelectric Point (pI)

33.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xan_ur_permease PF00860 32 - 436 1.4e-62 Permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 389
AccII CGCG 3 cut(s) 401, 689, 1460
AciI CCGC 6 cut(s) 389, 702, 861, 1014, 1072, 1458
AclWI GGATC 7 cut(s) 12, 51, 350, 797, 976, 989, 1288
AcoI YGGCCR 1 cut(s) 858
AcsI RAATTY 2 cut(s) 1127, 1526
AcuI CTGAAG 4 cut(s) 35, 629, 1188, 1291
AfaI GTAC 4 cut(s) 65, 379, 393, 1178
AfeI AGCGCT 2 cut(s) 666, 925
AfiI CCNNNNNNNGG 9 cut(s) 40, 88, 89, 176, 451, 544, 545, 640, 708
AloI GAACNNNNNNTCC 2 cut(s) 256, 288
AluBI AGCT 8 cut(s) 49, 98, 104, 828, 896, 905, 1172, 1343
AluI AGCT 8 cut(s) 49, 98, 104, 828, 896, 905, 1172, 1343
Alw21I GWGCWC 1 cut(s) 823
Alw26I GTCTC 5 cut(s) 877, 1030, 1278, 1448, 1458
AlwI GGATC 7 cut(s) 12, 51, 350, 797, 976, 989, 1288
AlwNI CAGNNNCTG 1 cut(s) 607
Aor51HI AGCGCT 2 cut(s) 666, 925
AoxI GGCC 2 cut(s) 858, 1336
ApeKI GCWGC 3 cut(s) 905, 908, 1169
ApoI RAATTY 2 cut(s) 1127, 1526
AspLEI GCGC 4 cut(s) 401, 667, 691, 926
AspS9I GGNCC 1 cut(s) 1337
AsuHPI GGTGA 3 cut(s) 23, 203, 1389
AsuNHI GCTAGC 1 cut(s) 920
BamHI GGATCC 1 cut(s) 981
BbsI GAAGAC 1 cut(s) 263
Bbv12I GWGCWC 1 cut(s) 823
BbvI GCAGC 3 cut(s) 892, 895, 1181
BccI CCATC 4 cut(s) 169, 182, 850, 1408
BceAI ACGGC 2 cut(s) 939, 1351
BcoDI GTCTC 5 cut(s) 877, 1030, 1278, 1448, 1458
BfaI CTAG 4 cut(s) 825, 921, 1049, 1121
BfmI CTRYAG 4 cut(s) 99, 141, 748, 1029
BfoI RGCGCY 2 cut(s) 668, 927
BglI GCCNNNNNGGC 1 cut(s) 710
BisI GCNGC 5 cut(s) 861, 906, 909, 1072, 1170
BlsI GCNGC 5 cut(s) 862, 907, 910, 1073, 1171
BmcAI AGTACT 1 cut(s) 65
BmgT120I GGNCC 1 cut(s) 1337
BmiI GGNNCC 3 cut(s) 309, 492, 983
BmrI ACTGGG 2 cut(s) 533, 629
BmsI GCATC 2 cut(s) 422, 823
BmtI GCTAGC 1 cut(s) 924
BmuI ACTGGG 2 cut(s) 533, 629
BpiI GAAGAC 1 cut(s) 263
BplI GAGNNNNNCTC 2 cut(s) 637, 669
BpmI CTGGAG 1 cut(s) 912
Bsa29I ATCGAT 1 cut(s) 1292
BsaI GGTCTC 1 cut(s) 1448
BsaJI CCNNGG 5 cut(s) 86, 433, 785, 955, 1478
BsaXI ACNNNNNCTCC 2 cut(s) 919, 949
Bsc4I CCNNNNNNNGG 9 cut(s) 40, 88, 89, 176, 451, 544, 545, 640, 708
Bse1I ACTGG 5 cut(s) 539, 635, 705, 895, 921
BseCI ATCGAT 1 cut(s) 1292
BseDI CCNNGG 5 cut(s) 86, 433, 785, 955, 1478
BseGI GGATG 2 cut(s) 324, 413
BseLI CCNNNNNNNGG 9 cut(s) 40, 88, 89, 176, 451, 544, 545, 640, 708
BseMII CTCAG 3 cut(s) 614, 1104, 1238
BseNI ACTGG 5 cut(s) 539, 635, 705, 895, 921
BseRI GAGGAG 2 cut(s) 35, 924
BseXI GCAGC 3 cut(s) 892, 895, 1181
BseYI CCCAGC 1 cut(s) 1339
BsgI GTGCAG 1 cut(s) 894
Bsh1236I CGCG 3 cut(s) 401, 689, 1460
BshFI GGCC 2 cut(s) 860, 1338
BshVI ATCGAT 1 cut(s) 1292
BsiHKAI GWGCWC 1 cut(s) 823
BslI CCNNNNNNNGG 9 cut(s) 40, 88, 89, 176, 451, 544, 545, 640, 708
BsmAI GTCTC 5 cut(s) 877, 1030, 1278, 1448, 1458
BsmI GAATGC 1 cut(s) 299
BsnI GGCC 2 cut(s) 860, 1338
Bso31I GGTCTC 1 cut(s) 1448
Bsp1286I GDGCHC 1 cut(s) 823
Bsp143I GATC 7 cut(s) 4, 43, 355, 402, 789, 981, 1293
Bsp19I CCATGG 1 cut(s) 86
BspACI CCGC 6 cut(s) 389, 702, 861, 1014, 1072, 1458
BspANI GGCC 2 cut(s) 860, 1338
BspCNI CTCAG 3 cut(s) 613, 1103, 1239
BspDI ATCGAT 1 cut(s) 1292
BspFNI CGCG 3 cut(s) 401, 689, 1460
BspLI GGNNCC 3 cut(s) 309, 492, 983
BspMAI CTGCAG 2 cut(s) 145, 752
BspOI GCTAGC 1 cut(s) 924
BspPI GGATC 7 cut(s) 12, 51, 350, 797, 976, 989, 1288
BspTNI GGTCTC 1 cut(s) 1448
BsrBI CCGCTC 1 cut(s) 389
BsrI ACTGG 5 cut(s) 539, 635, 705, 895, 921
BssECI CCNNGG 5 cut(s) 86, 433, 785, 955, 1478
BssMI GATC 7 cut(s) 4, 43, 355, 402, 789, 981, 1293
BssT1I CCWWGG 3 cut(s) 86, 785, 1478
Bst4CI ACNGT 5 cut(s) 68, 222, 280, 995, 1556
Bst6I CTCTTC 5 cut(s) 249, 340, 527, 1262, 1283
BstC8I GCNNGC 2 cut(s) 922, 968
BstDEI CTNAG 8 cut(s) 374, 600, 950, 1010, 1090, 1247, 1282, 1488
BstDSI CCRYGG 2 cut(s) 86, 955
BstF5I GGATG 2 cut(s) 324, 413
BstFNI CGCG 3 cut(s) 401, 689, 1460
BstH2I RGCGCY 2 cut(s) 668, 927
BstHHI GCGC 4 cut(s) 401, 667, 691, 926
BstKTI GATC 7 cut(s) 7, 46, 358, 405, 792, 984, 1296
BstMAI GTCTC 5 cut(s) 877, 1030, 1278, 1448, 1458
BstMBI GATC 7 cut(s) 4, 43, 355, 402, 789, 981, 1293
BstMWI GCNNNNNNNGC 7 cut(s) 710, 842, 857, 902, 917, 972, 1142
BstNSI RCATGY 1 cut(s) 695
BstSFI CTRYAG 4 cut(s) 99, 141, 748, 1029
BstUI CGCG 3 cut(s) 401, 689, 1460
BstV1I GCAGC 3 cut(s) 892, 895, 1181
BstV2I GAAGAC 1 cut(s) 263
BstX2I RGATCY 3 cut(s) 4, 355, 981
BstXI CCANNNNNNTGG 1 cut(s) 813
BstYI RGATCY 3 cut(s) 4, 355, 981
Bsu15I ATCGAT 1 cut(s) 1292
BsuRI GGCC 2 cut(s) 860, 1338
BsuTUI ATCGAT 1 cut(s) 1292
BtgI CCRYGG 2 cut(s) 86, 955
BtsCI GGATG 2 cut(s) 324, 413
BtsI GCAGTG 2 cut(s) 150, 1428
BtsIMutI CAGTG 5 cut(s) 150, 546, 712, 1409, 1428
Cac8I GCNNGC 2 cut(s) 922, 968
CaiI CAGNNNCTG 1 cut(s) 607
CfoI GCGC 4 cut(s) 401, 667, 691, 926
Cfr13I GGNCC 1 cut(s) 1337
ClaI ATCGAT 1 cut(s) 1292
CseI GACGC 1 cut(s) 1171
Csp6I GTAC 4 cut(s) 64, 378, 392, 1177
CviAII CATG 9 cut(s) 87, 304, 329, 574, 692, 842, 944, 1237, 1321
CviQI GTAC 4 cut(s) 64, 378, 392, 1177
DdeI CTNAG 8 cut(s) 374, 600, 950, 1010, 1090, 1247, 1282, 1488
DpnI GATC 7 cut(s) 6, 45, 357, 404, 791, 983, 1295
DpnII GATC 7 cut(s) 4, 43, 355, 402, 789, 981, 1293
EaeI YGGCCR 1 cut(s) 858
Eam1104I CTCTTC 5 cut(s) 249, 340, 527, 1262, 1283
EarI CTCTTC 5 cut(s) 249, 340, 527, 1262, 1283
Eco130I CCWWGG 3 cut(s) 86, 785, 1478
Eco31I GGTCTC 1 cut(s) 1448
Eco47III AGCGCT 2 cut(s) 666, 925
Eco57I CTGAAG 4 cut(s) 35, 629, 1188, 1291
EcoRI GAATTC 1 cut(s) 1526
EcoT14I CCWWGG 3 cut(s) 86, 785, 1478
EcoT22I ATGCAT 1 cut(s) 301
ErhI CCWWGG 3 cut(s) 86, 785, 1478
FaeI CATG 9 cut(s) 90, 307, 332, 577, 695, 845, 947, 1240, 1324
FatI CATG 9 cut(s) 86, 303, 328, 573, 691, 841, 943, 1236, 1320
FauNDI CATATG 1 cut(s) 295
Fnu4HI GCNGC 5 cut(s) 861, 906, 909, 1072, 1170
FokI GGATG 2 cut(s) 311, 400
Fsp4HI GCNGC 5 cut(s) 861, 906, 909, 1072, 1170
FspBI CTAG 4 cut(s) 825, 921, 1049, 1121
GlaI GCGC 4 cut(s) 400, 666, 690, 925
GluI GCNGC 5 cut(s) 861, 906, 909, 1072, 1170
GsaI CCCAGC 1 cut(s) 1343
GsuI CTGGAG 1 cut(s) 912
HaeII RGCGCY 2 cut(s) 668, 927
HaeIII GGCC 2 cut(s) 860, 1338
HgaI GACGC 1 cut(s) 1171
HhaI GCGC 4 cut(s) 401, 667, 691, 926
Hin1II CATG 9 cut(s) 90, 307, 332, 577, 695, 845, 947, 1240, 1324
Hin6I GCGC 4 cut(s) 399, 665, 689, 924
HinP1I GCGC 4 cut(s) 399, 665, 689, 924
HincII GTYRAC 2 cut(s) 238, 888
HindII GTYRAC 2 cut(s) 238, 888
HinfI GANTC 9 cut(s) 74, 332, 468, 519, 534, 567, 796, 884, 1212
HpaI GTTAAC 1 cut(s) 238
HphI GGTGA 3 cut(s) 23, 203, 1389
Hpy166II GTNNAC 3 cut(s) 238, 888, 1177
Hpy188I TCNGA 5 cut(s) 213, 609, 1248, 1310, 1496
Hpy188III TCNNGA 6 cut(s) 465, 697, 793, 1159, 1375, 1442
Hpy8I GTNNAC 3 cut(s) 238, 888, 1177
Hpy99I CGWCG 1 cut(s) 1268
HpyAV CCTTC 2 cut(s) 165, 236
HpyCH4III ACNGT 5 cut(s) 68, 222, 280, 995, 1556
HpyCH4V TGCA 8 cut(s) 143, 299, 413, 503, 750, 911, 1169, 1225
HpyF10VI GCNNNNNNNGC 7 cut(s) 710, 842, 857, 902, 917, 972, 1142
HpyF3I CTNAG 8 cut(s) 374, 600, 950, 1010, 1090, 1247, 1282, 1488
Hsp92II CATG 9 cut(s) 90, 307, 332, 577, 695, 845, 947, 1240, 1324
HspAI GCGC 4 cut(s) 399, 665, 689, 924
KspAI GTTAAC 1 cut(s) 238
Kzo9I GATC 7 cut(s) 4, 43, 355, 402, 789, 981, 1293
LmnI GCTCC 3 cut(s) 787, 818, 893
Lsp1109I GCAGC 3 cut(s) 892, 895, 1181
LweI GCATC 2 cut(s) 422, 823
MaeI CTAG 4 cut(s) 825, 921, 1049, 1121
MaeIII GTNAC 1 cut(s) 29
MalI GATC 7 cut(s) 6, 45, 357, 404, 791, 983, 1295
MbiI CCGCTC 1 cut(s) 389
MboI GATC 7 cut(s) 4, 43, 355, 402, 789, 981, 1293
MfeI CAATTG 1 cut(s) 362
MflI RGATCY 3 cut(s) 4, 355, 981
MhlI GDGCHC 1 cut(s) 823
MluCI AATT 9 cut(s) 159, 362, 426, 550, 629, 740, 1127, 1226, 1526
MlyI GAGTC 6 cut(s) 68, 326, 513, 561, 893, 1206
MmeI TCCRAC 3 cut(s) 299, 1045, 1189
Mph1103I ATGCAT 1 cut(s) 301
MseI TTAA 4 cut(s) 237, 506, 743, 989
MslI CAYNNNNRTG 3 cut(s) 811, 1235, 1350
MspA1I CMGCKG 2 cut(s) 863, 1172
MunI CAATTG 1 cut(s) 362
Mva1269I GAATGC 1 cut(s) 299
MvnI CGCG 3 cut(s) 401, 689, 1460
MwoI GCNNNNNNNGC 7 cut(s) 710, 842, 857, 902, 917, 972, 1142
NcoI CCATGG 1 cut(s) 86
NdeI CATATG 1 cut(s) 295
NdeII GATC 7 cut(s) 4, 43, 355, 402, 789, 981, 1293
NheI GCTAGC 1 cut(s) 920
NlaIII CATG 9 cut(s) 90, 307, 332, 577, 695, 845, 947, 1240, 1324
NlaIV GGNNCC 3 cut(s) 309, 492, 983
NmuCI GTSAC 1 cut(s) 29
NsiI ATGCAT 1 cut(s) 301
NspI RCATGY 1 cut(s) 695
PctI GAATGC 1 cut(s) 299
PfeI GAWTC 3 cut(s) 468, 534, 796
PkrI GCNGC 5 cut(s) 862, 907, 910, 1073, 1171
PleI GAGTC 6 cut(s) 68, 326, 513, 561, 892, 1206
PpsI GAGTC 6 cut(s) 68, 326, 513, 561, 892, 1206
PspFI CCCAGC 1 cut(s) 1339
PspN4I GGNNCC 3 cut(s) 309, 492, 983
PspPI GGNCC 1 cut(s) 1337
PstI CTGCAG 2 cut(s) 145, 752
PstNI CAGNNNCTG 1 cut(s) 607
PsuI RGATCY 3 cut(s) 4, 355, 981
PvuII CAGCTG 1 cut(s) 1172
RsaI GTAC 4 cut(s) 65, 379, 393, 1178
RsaNI GTAC 4 cut(s) 64, 378, 392, 1177
RseI CAYNNNNRTG 3 cut(s) 811, 1235, 1350
SaqAI TTAA 4 cut(s) 237, 506, 743, 989
SatI GCNGC 5 cut(s) 861, 906, 909, 1072, 1170
Sau3AI GATC 7 cut(s) 4, 43, 355, 402, 789, 981, 1293
Sau96I GGNCC 1 cut(s) 1337
ScaI AGTACT 1 cut(s) 65
SchI GAGTC 6 cut(s) 68, 326, 513, 561, 893, 1206
SduI GDGCHC 1 cut(s) 823
SfaNI GCATC 2 cut(s) 422, 823
SfcI CTRYAG 4 cut(s) 99, 141, 748, 1029
SmiMI CAYNNNNRTG 3 cut(s) 811, 1235, 1350
Sse9I AATT 9 cut(s) 159, 362, 426, 550, 629, 740, 1127, 1226, 1526
SsiI CCGC 6 cut(s) 389, 702, 861, 1014, 1072, 1458
SspMI CTAG 4 cut(s) 825, 921, 1049, 1121
StyI CCWWGG 3 cut(s) 86, 785, 1478
TaaI ACNGT 5 cut(s) 68, 222, 280, 995, 1556
TaqI TCGA 3 cut(s) 114, 351, 1292
TasI AATT 9 cut(s) 159, 362, 426, 550, 629, 740, 1127, 1226, 1526
TatI WGTACW 3 cut(s) 63, 377, 1176
TauI GCSGC 2 cut(s) 863, 1074
TfiI GAWTC 3 cut(s) 468, 534, 796
Tru1I TTAA 4 cut(s) 237, 506, 743, 989
Tru9I TTAA 4 cut(s) 237, 506, 743, 989
TscAI CASTG 5 cut(s) 150, 546, 712, 1416, 1428
TseFI GTSAC 1 cut(s) 29
TseI GCWGC 3 cut(s) 905, 908, 1169
Tsp45I GTSAC 1 cut(s) 29
TspDTI ATGAA 6 cut(s) 292, 765, 1249, 1253, 1337, 1560
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 5 cut(s) 150, 546, 712, 1416, 1428
XapI RAATTY 2 cut(s) 1127, 1526
XceI RCATGY 1 cut(s) 695
XspI CTAG 4 cut(s) 825, 921, 1049, 1121
ZrmI AGTACT 1 cut(s) 65
Zsp2I ATGCAT 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.