AT2G34290

Protein kinase, catalytic domain (InterPro IPR000719), Serine threonine-protein kinase-like domain (InterPro IPR017442), Protein kinase-like domain (InterPro IPR011009), Serine threonine-protein kinase, active site (InterPro IPR008271)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0018742
Physical Location & Seq
Reverse (-)
14472633 .. 14473437
805 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G34290.1

Sequence Viewer

Length: 798 bp
ATGGAGTTCGAAAGGTATCTGGGGGAAGGTTCGTTTGGATCGGTGAGCCTTTTCAGTTATAAAAGACGATGCGACGTTGAGACTCTCTACGCCGCCGTGAAAACCTCTGACGATGCTAAGTCTCTCTACGAAGAGTTTCAGATTCTGTCTAAATTCAAGGGTTGCTCGAGAATCGTCCAATGCTACGGTAGCGGAGTAGAACAGAGACTTAACGACAAGGGTTACGTAGAGTACACGATTCCTATGGAGTACGCAGCCGGAGGAAGCTTGAGCGATTTCATGGACCGATTCAACGACAAAAAATTGCCTGATCCGATGATCAGAAAGTTTACTCGTATGCTTCTCGAGGGTTTAGCCACAATTCACAGACACGGCTATGTTCACTGCGATCTCAAACCCGAGAACATCCTTGTTTTCCCTGGTTCTGTCTGCGATCTCAAATTGAAGATTTCTGATTTTGGGTTGTCGAAAAGAGATGGAGACACTACGTGGTGGCATCCTCTTAAATCGTATGCGGGAACACCGATCTATATGTCGCCGGAGTCTATCTCTCACGGGGAGATAGGGAAAGGACTTGACTTATGGTCGTTGGGATGTGTTGTGTTGGAGATGTACACTGGGAAGAGACCATGGTGGCATACTAACTATGAACTAGAAGATCTCATGAAGTGTTACGAGCCATTGTTTCCGCCTAATCTTCCTTGTGATGCAAAACTCTTTCTCATGACCTGCTTTGCGCCTGAACCAGATGAGAGGAAAGACGCGTTGACATTGTTGAGACAAAGCTTCTTTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

265

Amino Acids

30.48

Weight (kDa)

5.92

Isoelectric Point (pI)

35.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 2 - 264 2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 2 - 258 2.2e-30 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018742)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05060 AT2G34290 AT2G41910 AT2G41920 AT2G41930 AT2G42550 AT5G12090 AT5G27510 AT5G27790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 60
Acc36I ACCTGC 1 cut(s) 737
AccII CGCG 1 cut(s) 764
AciI CCGC 4 cut(s) 93, 192, 515, 689
AclWI GGATC 2 cut(s) 46, 305
AcsI RAATTY 1 cut(s) 152
AdeI CACNNNGTG 1 cut(s) 489
AfaI GTAC 3 cut(s) 233, 251, 614
AflIII ACRYGT 1 cut(s) 762
AgsI TTSAA 3 cut(s) 157, 292, 445
AhdI GACNNNNNGTC 1 cut(s) 583
AjnI CCWGG 1 cut(s) 418
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AluBI AGCT 2 cut(s) 267, 786
AluI AGCT 2 cut(s) 267, 786
Alw26I GTCTC 6 cut(s) 74, 126, 199, 474, 619, 772
AlwI GGATC 2 cut(s) 46, 305
AlwNI CAGNNNCTG 1 cut(s) 145
Ama87I CYCGRG 3 cut(s) 166, 344, 398
ApeKI GCWGC 1 cut(s) 254
ApoI RAATTY 1 cut(s) 152
Asp700I GAANNNNTTC 1 cut(s) 135
AspLEI GCGC 1 cut(s) 739
AspS9I GGNCC 1 cut(s) 283
AsuHPI GGTGA 1 cut(s) 55
AsuII TTCGAA 1 cut(s) 9
AvaI CYCGRG 3 cut(s) 166, 344, 398
AvaII GGWCC 1 cut(s) 283
BbvI GCAGC 1 cut(s) 266
BccI CCATC 1 cut(s) 470
BceAI ACGGC 2 cut(s) 80, 388
BciT130I CCWGG 1 cut(s) 420
BclI TGATCA 1 cut(s) 318
BcoDI GTCTC 6 cut(s) 74, 126, 199, 474, 619, 772
BfaI CTAG 1 cut(s) 653
BfuAI ACCTGC 1 cut(s) 737
BglII AGATCT 1 cut(s) 658
BisI GCNGC 2 cut(s) 93, 255
BlsI GCNGC 2 cut(s) 94, 256
Bme1390I CCNGG 1 cut(s) 420
Bme18I GGWCC 1 cut(s) 283
BmeRI GACNNNNNGTC 1 cut(s) 583
BmeT110I CYCGRG 3 cut(s) 166, 344, 398
BmgT120I GGNCC 1 cut(s) 283
BmrFI CCNGG 1 cut(s) 420
BmrI ACTGGG 1 cut(s) 627
BmsI GCATC 4 cut(s) 59, 103, 505, 697
BmuI ACTGGG 1 cut(s) 627
BplI GAGNNNNNCTC 2 cut(s) 533, 565
Bpu14I TTCGAA 1 cut(s) 9
BpuEI CTTGAG 1 cut(s) 289
BsaAI YACGTR 2 cut(s) 226, 489
BsaI GGTCTC 1 cut(s) 619
BsaJI CCNNGG 2 cut(s) 418, 629
Bse1I ACTGG 1 cut(s) 622
BseBI CCWGG 1 cut(s) 420
BseDI CCNNGG 2 cut(s) 418, 629
BseGI GGATG 3 cut(s) 405, 496, 599
BseNI ACTGG 1 cut(s) 622
BseXI GCAGC 1 cut(s) 266
Bsh1236I CGCG 1 cut(s) 764
BsiHKCI CYCGRG 3 cut(s) 166, 344, 398
BsiSI CCGG 2 cut(s) 258, 539
BsmAI GTCTC 6 cut(s) 74, 126, 199, 474, 619, 772
Bso31I GGTCTC 1 cut(s) 619
BsoBI CYCGRG 3 cut(s) 166, 344, 398
Bsp119I TTCGAA 1 cut(s) 9
Bsp1407I TGTACA 1 cut(s) 612
Bsp143I GATC 7 cut(s) 38, 310, 318, 388, 433, 525, 658
Bsp19I CCATGG 1 cut(s) 629
BspACI CCGC 4 cut(s) 93, 192, 515, 689
BspFNI CGCG 1 cut(s) 764
BspHI TCATGA 2 cut(s) 663, 723
BspMI ACCTGC 1 cut(s) 737
BspPI GGATC 2 cut(s) 46, 305
BspT104I TTCGAA 1 cut(s) 9
BspTNI GGTCTC 1 cut(s) 619
BsrGI TGTACA 1 cut(s) 612
BsrI ACTGG 1 cut(s) 622
BssECI CCNNGG 2 cut(s) 418, 629
BssMI GATC 7 cut(s) 38, 310, 318, 388, 433, 525, 658
BssT1I CCWWGG 1 cut(s) 629
Bst2UI CCWGG 1 cut(s) 420
Bst4CI ACNGT 1 cut(s) 188
Bst6I CTCTTC 2 cut(s) 126, 617
BstAUI TGTACA 1 cut(s) 612
BstBAI YACGTR 2 cut(s) 226, 489
BstBI TTCGAA 1 cut(s) 9
BstDEI CTNAG 1 cut(s) 117
BstDSI CCRYGG 1 cut(s) 629
BstF5I GGATG 3 cut(s) 405, 496, 599
BstFNI CGCG 1 cut(s) 764
BstHHI GCGC 1 cut(s) 739
BstKTI GATC 7 cut(s) 41, 313, 321, 391, 436, 528, 661
BstMAI GTCTC 6 cut(s) 74, 126, 199, 474, 619, 772
BstMBI GATC 7 cut(s) 38, 310, 318, 388, 433, 525, 658
BstMWI GCNNNNNNNGC 1 cut(s) 189
BstNI CCWGG 1 cut(s) 420
BstSCI CCNGG 1 cut(s) 418
BstSNI TACGTA 1 cut(s) 226
BstUI CGCG 1 cut(s) 764
BstV1I GCAGC 1 cut(s) 266
BstX2I RGATCY 1 cut(s) 658
BstYI RGATCY 1 cut(s) 658
BtgI CCRYGG 1 cut(s) 629
BtsCI GGATG 3 cut(s) 405, 496, 599
BtsI GCAGTG 1 cut(s) 382
BtsIMutI CAGTG 2 cut(s) 382, 615
BveI ACCTGC 1 cut(s) 737
CaiI CAGNNNCTG 1 cut(s) 145
CciI TCATGA 2 cut(s) 663, 723
CfoI GCGC 1 cut(s) 739
Cfr13I GGNCC 1 cut(s) 283
CseI GACGC 1 cut(s) 770
Csp6I GTAC 3 cut(s) 232, 250, 613
CviAII CATG 4 cut(s) 280, 630, 664, 724
CviJI RGCY 7 cut(s) 48, 257, 267, 356, 375, 679, 786
CviKI_1 RGCY 7 cut(s) 48, 257, 267, 356, 375, 679, 786
CviQI GTAC 3 cut(s) 232, 250, 613
DdeI CTNAG 1 cut(s) 117
DpnI GATC 7 cut(s) 40, 312, 320, 390, 435, 527, 660
DpnII GATC 7 cut(s) 38, 310, 318, 388, 433, 525, 658
DraIII CACNNNGTG 1 cut(s) 489
DriI GACNNNNNGTC 1 cut(s) 583
Eam1104I CTCTTC 2 cut(s) 126, 617
Eam1105I GACNNNNNGTC 1 cut(s) 583
EarI CTCTTC 2 cut(s) 126, 617
EciI GGCGGA 1 cut(s) 678
Eco105I TACGTA 1 cut(s) 226
Eco130I CCWWGG 1 cut(s) 629
Eco31I GGTCTC 1 cut(s) 619
Eco47I GGWCC 1 cut(s) 283
Eco88I CYCGRG 3 cut(s) 166, 344, 398
EcoRII CCWGG 1 cut(s) 418
EcoT14I CCWWGG 1 cut(s) 629
ErhI CCWWGG 1 cut(s) 629
FaeI CATG 4 cut(s) 283, 633, 667, 727
FatI CATG 4 cut(s) 279, 629, 663, 723
FauI CCCGC 1 cut(s) 508
FbaI TGATCA 1 cut(s) 318
Fnu4HI GCNGC 2 cut(s) 93, 255
FokI GGATG 3 cut(s) 392, 483, 606
Fsp4HI GCNGC 2 cut(s) 93, 255
FspBI CTAG 1 cut(s) 653
GlaI GCGC 1 cut(s) 738
GluI GCNGC 2 cut(s) 93, 255
HapII CCGG 2 cut(s) 258, 539
HgaI GACGC 1 cut(s) 770
HhaI GCGC 1 cut(s) 739
Hin1II CATG 4 cut(s) 283, 633, 667, 727
Hin6I GCGC 1 cut(s) 737
HinP1I GCGC 1 cut(s) 737
HincII GTYRAC 1 cut(s) 768
HindII GTYRAC 1 cut(s) 768
HindIII AAGCTT 2 cut(s) 265, 784
HinfI GANTC 6 cut(s) 82, 142, 171, 238, 288, 542
HpaII CCGG 2 cut(s) 258, 539
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 5 cut(s) 234, 330, 382, 615, 768
Hpy188I TCNGA 5 cut(s) 109, 141, 315, 323, 454
Hpy188III TCNNGA 4 cut(s) 168, 344, 664, 724
Hpy8I GTNNAC 5 cut(s) 234, 330, 382, 615, 768
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 1 cut(s) 20
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4IV ACGT 3 cut(s) 75, 225, 488
HpyCH4V TGCA 1 cut(s) 710
HpyF10VI GCNNNNNNNGC 1 cut(s) 189
HpyF3I CTNAG 1 cut(s) 117
HpySE526I ACGT 3 cut(s) 75, 225, 488
Hsp92II CATG 4 cut(s) 283, 633, 667, 727
HspAI GCGC 1 cut(s) 737
Ksp22I TGATCA 1 cut(s) 318
Kzo9I GATC 7 cut(s) 38, 310, 318, 388, 433, 525, 658
Lsp1109I GCAGC 1 cut(s) 266
LweI GCATC 4 cut(s) 59, 103, 505, 697
MaeI CTAG 1 cut(s) 653
MaeII ACGT 3 cut(s) 75, 225, 488
MaeIII GTNAC 2 cut(s) 221, 671
MalI GATC 7 cut(s) 40, 312, 320, 390, 435, 527, 660
MboI GATC 7 cut(s) 38, 310, 318, 388, 433, 525, 658
MboII GAAGA 5 cut(s) 143, 457, 634, 668, 689
MflI RGATCY 1 cut(s) 658
MluCI AATT 4 cut(s) 152, 302, 360, 440
MluI ACGCGT 1 cut(s) 762
MlyI GAGTC 2 cut(s) 76, 551
MmeI TCCRAC 1 cut(s) 585
MnlI CCTC 5 cut(s) 115, 254, 340, 510, 747
MroXI GAANNNNTTC 1 cut(s) 135
MseI TTAA 2 cut(s) 210, 504
MslI CAYNNNNRTG 1 cut(s) 375
MspI CCGG 2 cut(s) 258, 539
MspR9I CCNGG 1 cut(s) 420
MvaI CCWGG 1 cut(s) 420
MvnI CGCG 1 cut(s) 764
MwoI GCNNNNNNNGC 1 cut(s) 189
NcoI CCATGG 1 cut(s) 629
NdeII GATC 7 cut(s) 38, 310, 318, 388, 433, 525, 658
NlaIII CATG 4 cut(s) 283, 633, 667, 727
NspV TTCGAA 1 cut(s) 9
PaeR7I CTCGAG 2 cut(s) 166, 344
PagI TCATGA 2 cut(s) 663, 723
PdmI GAANNNNTTC 1 cut(s) 135
PfeI GAWTC 4 cut(s) 142, 171, 238, 288
PkrI GCNGC 2 cut(s) 94, 256
PleI GAGTC 2 cut(s) 76, 550
PpsI GAGTC 2 cut(s) 76, 550
Ppu21I YACGTR 2 cut(s) 226, 489
PsiI TTATAA 1 cut(s) 60
Psp6I CCWGG 1 cut(s) 418
PspGI CCWGG 1 cut(s) 418
PspPI GGNCC 1 cut(s) 283
PstNI CAGNNNCTG 1 cut(s) 145
PsuI RGATCY 1 cut(s) 658
RsaI GTAC 3 cut(s) 233, 251, 614
RsaNI GTAC 3 cut(s) 232, 250, 613
RseI CAYNNNNRTG 1 cut(s) 375
SaqAI TTAA 2 cut(s) 210, 504
SatI GCNGC 2 cut(s) 93, 255
Sau3AI GATC 7 cut(s) 38, 310, 318, 388, 433, 525, 658
Sau96I GGNCC 1 cut(s) 283
SchI GAGTC 2 cut(s) 76, 551
ScrFI CCNGG 1 cut(s) 420
SetI ASST 9 cut(s) 17, 31, 78, 107, 228, 269, 491, 731, 788
SfaNI GCATC 4 cut(s) 59, 103, 505, 697
Sfr274I CTCGAG 2 cut(s) 166, 344
SfuI TTCGAA 1 cut(s) 9
SinI GGWCC 1 cut(s) 283
SlaI CTCGAG 2 cut(s) 166, 344
SmiMI CAYNNNNRTG 1 cut(s) 375
SmlI CTYRAG 3 cut(s) 166, 268, 344
SmoI CTYRAG 3 cut(s) 166, 268, 344
SnaBI TACGTA 1 cut(s) 226
Sse9I AATT 4 cut(s) 152, 302, 360, 440
SsiI CCGC 4 cut(s) 93, 192, 515, 689
SspMI CTAG 1 cut(s) 653
StyD4I CCNGG 1 cut(s) 418
StyI CCWWGG 1 cut(s) 629
TaaI ACNGT 1 cut(s) 188
TaiI ACGT 3 cut(s) 78, 228, 491
TaqI TCGA 4 cut(s) 9, 167, 345, 467
TaqII GACCGA 1 cut(s) 300
TasI AATT 4 cut(s) 152, 302, 360, 440
TatI WGTACW 2 cut(s) 231, 612
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 4 cut(s) 142, 171, 238, 288
Tru1I TTAA 2 cut(s) 210, 504
Tru9I TTAA 2 cut(s) 210, 504
TscAI CASTG 2 cut(s) 389, 622
TseI GCWGC 1 cut(s) 254
TspDTI ATGAA 3 cut(s) 268, 663, 680
TspRI CASTG 2 cut(s) 389, 622
VpaK11BI GGWCC 1 cut(s) 283
XapI RAATTY 1 cut(s) 152
XhoI CTCGAG 2 cut(s) 166, 344
XmnI GAANNNNTTC 1 cut(s) 135
XspI CTAG 1 cut(s) 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.