AT2G37520

Contains the following InterPro domains Zinc finger, PHD-type, conserved site (InterPro IPR019786), Zinc finger, PHD-type (InterPro IPR001965), Zinc finger, FYVE PHD-type (InterPro IPR011011), Acyl-CoA N-acyltransferase (InterPro IPR016181), Zinc finger, PHD-finger (InterPro IPR019787)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0009150
Physical Location & Seq
Reverse (-)
15744670 .. 15750135
5466 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G37520.1

Sequence Viewer

Length: 2490 bp
ATGGGAGAAGGAACTATTTGTTTGGAGATGCCAAAGGAAGAGAATGGTCAATTGAAAAGAGATAGGCTTGATGATGATACTGATGAAGGTAATAAAGGAGATCACTTTCCCAGTAAGAAACAAGCTAAAGAAGCTTCTAATGATGACATTACATCGGAGATTTCAAATCCAGTCGCTTCTCCGGTTGAAAGCACGTCTCTTTTTCGTGATGTCTCTAGCCAGCCGGTTAAATCCGGTTTAGTTGAGTGCTCCGGGAGTGATTTTGGGTCCGAAGAGACTGTAAGTGACGATGCATCCGTTGTAGGTAGCTCACAAACAGAGCAGTCGAGTGATGTTTTACCATCTCGTTTTGTGTTGGAGATTCCTAAGCATCTTAGCTCGACTGGGATCACGAAGATCACGTTTAAGTTGAGTAAACCAAAGAAGGAATTTGATGATTTGCCTTTGATAAAGGATCATACTTGGGACGCTGGTGTTGTGAAGATGCCGAAGAAAAAGATTGTTTCTTTGAGCTACCCATCTAATGTCAAGAAGCTATTGGAAACGGGTATACTTGAAGGAGCTCGAGTGAAGTATATTTCAACCCCACCTGTGAGACAGCTTCTGGGGATAATCCATTCGGGTGGCTATTTGTGTGGCTGTACAACTTGCAATTTCTCGAAAGTTCTAAGTGCGTATGAGTTTGAGCAGCATGCTGGTGCAAAAACTAGACATCCTAATAATCACATATTTTTGGAGAATAGAAGGGCGGTTTATAACATAGTTCAAGAACTGAAGACTGCTCCTCGTGTTGTTCTCGAGGAAGTGATAAGGAATGTAGCTGGTTCTGCTCTGAATGAGGAGGGCTTACGAGCTTGGAAAGCAAGTTTCCAACAGAGTAATAGCATGTCTGACCGGAATTATATTACGGATCATTCCACTGTCAGTTATCTTGGTCCTGGTCTTGATGAGAGTCAGAGCCTTACTCCATGCTCTGTGGAGAACCATTATTTTTCAGAGAAAACATATGCAAAGGACACATTAGATGAGCCGAAGCGGATAGCAAAGAAGCTTACTTCTCATGTATCTGGTACGGGTTGCCATAAGAAAGTTTCTGAAGGAAGCAATAGAAAAAGGGATAATGATTTACATCGGTTGCTGTTTATGCCTAATGGACTTCCAGACGGGACTGAATTGGCTTACTATGTGAAAACGCAGAAACTACTACAGGGTTACAAGCAAGGAAGTGGTATAGTATGTAGCTGCTGCAGTAGAGAGATTAGTCCTTCGCAATTTGAAGCGCATGCTGGAATGGCGGCTAGACGACAACCTTATCGACATATCTTCATCTCTTCTGGATTGTCATTGCATGATATAGCCATGTCACTGGCCAATGGACATGTCATTACAACTGGTGATAGTGATGACATGTGTTCTATTTGTGGGGATGGTGGAGATTTGTTACTTTGTGCTGGATGTCCTCAAGCATTTCATACAGCTTGTTTGAAATTTCAGTCTATGCCTGAAGGTACTTGGTACTGTTCGAGCTGCAATGATGGACCTATCTCTAGTAAAAAGGCTACTACTACTGATCCTTCTGGCAACGCTAGGCCTATAGTTATAAGACTCTCAAGAGTCGTGAAAGCGCCAGAAAGCGATATTGGTGGCTGTGTGTTCTGCAGGTCCCATGATTTTAGCATTGGAAAATTTGATGATAGGACTGTTATTCTCTGTGACCAGTGTGAGAAAGAGTACCATGTTGGTTGCCTGAGAGAGAACGGGTTCTGTGATTTGAAAGAAATCCCGCAGGAGAAATGGTTCTGCTGTAGCAATTGCAGCAGGATTCACACGGCAGTTCAGAATTCTGTTTCTTGTGGGCCACAAACTCTTCCTACACCTTTGTTAGACATGATATGCAGAAAAGACAGAGAAAAAGGAATATTTACCGATATTGGGGATACAGTCGAATGGAGAATACTTAGTGGAAAAAGTCGATACCCAGAGCATCTGCCTTTGCTTTCACGAGCGGCTGTTATCTTCAGGGAGTGTTTTGATCCCATTGTTGCAAAGTCTGGCCGTGATCTGATTCCTGTCATGGTGTATGGGAGAAATATATCTGGCCAGGAGTTTGGAGGAATGTACTGTTTGGTCCTGATAGTAAATTCTCTTGTTGTTTCTGCTGCGCTGCTGAGGATATTTGGTCAGGAAGTTGCTGAACTTCCTATAGTGGCCACAAGCCGAGAGTACCAAGGAAGGGGATACTTCCAAGGGCTGTATGCCTGTGTAGAGAATCTTCTTTCTTCTTTAAATGTTGAGAACCTGGTTCTTCCGGCAGCTGAAGAAGCAGAGTCTATATGGACAAAGAAGTTTGGCTTTACAAAGATGTCTGACCAGCAATTGCAGGAGTACCAAAAGGAAGTGCAGCTTACAATATTCAAAGGAACCTCAATGCTGGAGAAGAAAGTACCTAAGGCGACAACGGGTTTATCAGAATCTACAACTCTCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas PHD

Protein Analysis

829

Amino Acids

91.37

Weight (kDa)

6.35

Isoelectric Point (pI)

46.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TDBD PF16135 203 - 257 1.7e-11 Tify domain binding domain
TDBD PF16135 407 - 452 1.4e-13 Tify domain binding domain
PHD-1st_NSD PF23011 468 - 511 5.8e-09 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1
PHD PF00628 471 - 510 7.8e-08 PHD-finger
IDM1_C PF23209 677 - 814 1.4e-51 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 756, 1601
Acc36I ACCTGC 1 cut(s) 1650
AccBSI CCGCTC 1 cut(s) 2006
AccI GTMKAC 1 cut(s) 550
AciI CCGC 5 cut(s) 749, 1036, 1295, 1784, 2006
AclWI GGATC 5 cut(s) 395, 462, 918, 1565, 2027
AcoI YGGCCR 4 cut(s) 1368, 2053, 2098, 2208
AcsI RAATTY 5 cut(s) 428, 1487, 1685, 1840, 2140
AcuI CTGAAG 5 cut(s) 794, 1116, 1524, 2002, 2337
AfaI GTAC 9 cut(s) 643, 1072, 1510, 1517, 1733, 2120, 2225, 2387, 2445
AfiI CCNNNNNNNGG 2 cut(s) 1932, 2233
AflIII ACRYGT 2 cut(s) 1378, 1407
AjiI CACGTC 1 cut(s) 195
AjnI CCWGG 3 cut(s) 937, 2100, 2298
AjuI GAANNNNNNNTTGG 2 cut(s) 1623, 1655
AloI GAACNNNNNNTCC 2 cut(s) 1781, 1813
Alw21I GWGCWC 2 cut(s) 251, 565
Alw26I GTCTC 4 cut(s) 201, 217, 269, 589
AlwI GGATC 5 cut(s) 395, 462, 918, 1565, 2027
AlwNI CAGNNNCTG 1 cut(s) 604
Ama87I CYCGRG 2 cut(s) 564, 797
AoxI GGCC 6 cut(s) 1368, 1589, 1856, 2053, 2098, 2208
ApeKI GCWGC 9 cut(s) 688, 1242, 1245, 1527, 1815, 2159, 2164, 2312, 2401
ApoI RAATTY 5 cut(s) 428, 1487, 1685, 1840, 2140
Asp700I GAANNNNTTC 2 cut(s) 1760, 1796
AspLEI GCGC 3 cut(s) 1282, 1627, 2164
AspS9I GGNCC 6 cut(s) 267, 935, 1538, 1662, 1856, 2128
AsuC2I CCSGG 1 cut(s) 253
AsuHPI GGTGA 1 cut(s) 1406
AvaI CYCGRG 2 cut(s) 564, 797
AvaII GGWCC 5 cut(s) 267, 935, 1538, 1662, 2128
AxyI CCTNAGG 1 cut(s) 2448
BalI TGGCCA 3 cut(s) 1370, 2100, 2210
BanII GRGCYC 1 cut(s) 565
BarI GAAGNNNNNNTAC 2 cut(s) 2256, 2288
BauI CACGAG 2 cut(s) 786, 2001
BbsI GAAGAC 1 cut(s) 782
Bbv12I GWGCWC 2 cut(s) 251, 565
BbvCI CCTCAGC 1 cut(s) 2168
BbvI GCAGC 9 cut(s) 700, 1229, 1232, 1514, 1827, 2146, 2151, 2324, 2413
BccI CCATC 4 cut(s) 349, 526, 1421, 1529
BceAI ACGGC 2 cut(s) 1845, 2040
BciT130I CCWGG 3 cut(s) 939, 2102, 2300
BciVI GTATCC 2 cut(s) 1930, 2231
BcnI CCSGG 1 cut(s) 253
BcoDI GTCTC 4 cut(s) 201, 217, 269, 589
BfaI CTAG 5 cut(s) 216, 708, 1299, 1548, 1587
BfmI CTRYAG 6 cut(s) 1205, 1246, 1593, 1657, 1804, 2202
BfoI RGCGCY 1 cut(s) 1628
BfuAI ACCTGC 1 cut(s) 1650
BfuI GTATCC 2 cut(s) 1930, 2231
Bme1390I CCNGG 4 cut(s) 253, 939, 2102, 2300
Bme18I GGWCC 5 cut(s) 267, 935, 1538, 1662, 2128
BmeT110I CYCGRG 2 cut(s) 564, 797
BmgBI CACGTC 1 cut(s) 195
BmgT120I GGNCC 6 cut(s) 267, 935, 1538, 1662, 1856, 2128
BmiI GGNNCC 3 cut(s) 268, 1664, 2422
BmrFI CCNGG 4 cut(s) 253, 939, 2102, 2300
BmrI ACTGGG 2 cut(s) 105, 393
BmsI GCATC 6 cut(s) 18, 280, 302, 379, 474, 1993
BmuI ACTGGG 2 cut(s) 105, 393
BpiI GAAGAC 1 cut(s) 782
BplI GAGNNNNNCTC 2 cut(s) 949, 981
BpmI CTGGAG 1 cut(s) 2453
Bpu10I CCTNAGC 2 cut(s) 366, 2168
BpuEI CTTGAG 2 cut(s) 1446, 1594
BpuMI CCSGG 1 cut(s) 253
BsaBI GATNNNNATC 1 cut(s) 1128
BsaJI CCNNGG 2 cut(s) 2227, 2245
BsaWI WCCGGW 3 cut(s) 181, 233, 894
BsaXI ACNNNNNCTCC 4 cut(s) 552, 582, 1781, 1811
Bsc4I CCNNNNNNNGG 2 cut(s) 1932, 2233
Bse118I RCCGGY 1 cut(s) 223
Bse1I ACTGG 6 cut(s) 111, 170, 388, 1371, 1396, 1717
Bse21I CCTNAGG 1 cut(s) 2448
Bse3DI GCAATG 2 cut(s) 1343, 1537
Bse8I GATNNNNATC 1 cut(s) 1128
BseBI CCWGG 3 cut(s) 939, 2102, 2300
BseDI CCNNGG 2 cut(s) 2227, 2245
BseGI GGATG 4 cut(s) 293, 712, 1432, 1460
BseJI GATNNNNATC 1 cut(s) 1128
BseLI CCNNNNNNNGG 2 cut(s) 1932, 2233
BseMI GCAATG 2 cut(s) 1343, 1537
BseMII CTCAG 2 cut(s) 1739, 2159
BseNI ACTGG 6 cut(s) 111, 170, 388, 1371, 1396, 1717
BseRI GAGGAG 2 cut(s) 774, 854
BseXI GCAGC 9 cut(s) 700, 1229, 1232, 1514, 1827, 2146, 2151, 2324, 2413
BsgI GTGCAG 1 cut(s) 2420
BshFI GGCC 6 cut(s) 1370, 1591, 1858, 2055, 2100, 2210
BsiHKAI GWGCWC 2 cut(s) 251, 565
BsiHKCI CYCGRG 2 cut(s) 564, 797
BsiSI CCGG 6 cut(s) 182, 224, 234, 252, 895, 2309
BslFI GGGAC 3 cut(s) 479, 1180, 1648
BslI CCNNNNNNNGG 2 cut(s) 1932, 2233
BsmAI GTCTC 4 cut(s) 201, 217, 269, 589
BsmBI CGTCTC 1 cut(s) 201
BsmFI GGGAC 3 cut(s) 479, 1180, 1648
BsnI GGCC 6 cut(s) 1370, 1591, 1858, 2055, 2100, 2210
BsoBI CYCGRG 2 cut(s) 564, 797
Bsp1286I GDGCHC 2 cut(s) 251, 565
Bsp1407I TGTACA 1 cut(s) 641
Bsp143I GATC 8 cut(s) 100, 387, 396, 454, 910, 1570, 2032, 2059
BspACI CCGC 5 cut(s) 749, 1036, 1295, 1784, 2006
BspANI GGCC 6 cut(s) 1370, 1591, 1858, 2055, 2100, 2210
BspCNI CTCAG 2 cut(s) 1740, 2160
BspLI GGNNCC 3 cut(s) 268, 1664, 2422
BspMAI CTGCAG 2 cut(s) 1250, 1661
BspMI ACCTGC 1 cut(s) 1650
BspPI GGATC 5 cut(s) 395, 462, 918, 1565, 2027
BsrBI CCGCTC 1 cut(s) 2006
BsrDI GCAATG 2 cut(s) 1343, 1537
BsrFI RCCGGY 1 cut(s) 223
BsrGI TGTACA 1 cut(s) 641
BsrI ACTGG 6 cut(s) 111, 170, 388, 1371, 1396, 1717
BssAI RCCGGY 1 cut(s) 223
BssECI CCNNGG 2 cut(s) 2227, 2245
BssMI GATC 8 cut(s) 100, 387, 396, 454, 910, 1570, 2032, 2059
BssNAI GTATAC 1 cut(s) 551
BssSI CACGAG 2 cut(s) 786, 2001
BssT1I CCWWGG 2 cut(s) 2227, 2245
Bst1107I GTATAC 1 cut(s) 551
Bst2BI CACGAG 2 cut(s) 786, 2001
Bst2UI CCWGG 3 cut(s) 939, 2102, 2300
Bst4CI ACNGT 6 cut(s) 280, 922, 1520, 1702, 1942, 2123
Bst6I CTCTTC 4 cut(s) 33, 267, 1336, 1872
BstAUI TGTACA 1 cut(s) 641
BstC8I GCNNGC 3 cut(s) 221, 693, 1284
BstDEI CTNAG 7 cut(s) 366, 374, 668, 1748, 1958, 2168, 2448
BstF5I GGATG 4 cut(s) 293, 712, 1432, 1460
BstH2I RGCGCY 1 cut(s) 1628
BstHHI GCGC 3 cut(s) 1282, 1627, 2164
BstKTI GATC 8 cut(s) 103, 390, 399, 457, 913, 1573, 2035, 2062
BstMAI GTCTC 4 cut(s) 201, 217, 269, 589
BstMBI GATC 8 cut(s) 100, 387, 396, 454, 910, 1570, 2032, 2059
BstMWI GCNNNNNNNGC 7 cut(s) 131, 827, 860, 1144, 1292, 1815, 2321
BstNI CCWGG 3 cut(s) 939, 2102, 2300
BstNSI RCATGY 5 cut(s) 695, 889, 1286, 1382, 1411
BstSCI CCNGG 4 cut(s) 251, 937, 2100, 2298
BstSFI CTRYAG 6 cut(s) 1205, 1246, 1593, 1657, 1804, 2202
BstV1I GCAGC 9 cut(s) 700, 1229, 1232, 1514, 1827, 2146, 2151, 2324, 2413
BstV2I GAAGAC 1 cut(s) 782
BstXI CCANNNNNNTGG 3 cut(s) 623, 1366, 2108
BstZ17I GTATAC 1 cut(s) 551
Bsu36I CCTNAGG 1 cut(s) 2448
BsuI GTATCC 2 cut(s) 1930, 2231
BsuRI GGCC 6 cut(s) 1370, 1591, 1858, 2055, 2100, 2210
BtrI CACGTC 1 cut(s) 195
BtsCI GGATG 4 cut(s) 293, 712, 1432, 1460
BtsIMutI CAGTG 3 cut(s) 918, 1364, 1724
BveI ACCTGC 1 cut(s) 1650
Cac8I GCNNGC 3 cut(s) 221, 693, 1284
CaiI CAGNNNCTG 1 cut(s) 604
CfoI GCGC 3 cut(s) 1282, 1627, 2164
Cfr10I RCCGGY 1 cut(s) 223
Cfr13I GGNCC 6 cut(s) 267, 935, 1538, 1662, 1856, 2128
CseI GACGC 1 cut(s) 476
CsiI ACCWGGT 1 cut(s) 2298
Csp6I GTAC 9 cut(s) 642, 1071, 1509, 1516, 1732, 2119, 2224, 2386, 2444
CviQI GTAC 9 cut(s) 642, 1071, 1509, 1516, 1732, 2119, 2224, 2386, 2444
DdeI CTNAG 7 cut(s) 366, 374, 668, 1748, 1958, 2168, 2448
DpnI GATC 8 cut(s) 102, 389, 398, 456, 912, 1572, 2034, 2061
DpnII GATC 8 cut(s) 100, 387, 396, 454, 910, 1570, 2032, 2059
DraI TTTAAA 1 cut(s) 2286
EaeI YGGCCR 4 cut(s) 1368, 2053, 2098, 2208
Eam1104I CTCTTC 4 cut(s) 33, 267, 1336, 1872
EarI CTCTTC 4 cut(s) 33, 267, 1336, 1872
Ecl136II GAGCTC 1 cut(s) 563
Eco130I CCWWGG 2 cut(s) 2227, 2245
Eco147I AGGCCT 1 cut(s) 1591
Eco24I GRGCYC 1 cut(s) 565
Eco47I GGWCC 5 cut(s) 267, 935, 1538, 1662, 2128
Eco53kI GAGCTC 1 cut(s) 563
Eco57I CTGAAG 5 cut(s) 794, 1116, 1524, 2002, 2337
Eco81I CCTNAGG 1 cut(s) 2448
Eco88I CYCGRG 2 cut(s) 564, 797
EcoICRI GAGCTC 1 cut(s) 563
EcoO109I RGGNCCY 1 cut(s) 1662
EcoRI GAATTC 1 cut(s) 1840
EcoRII CCWGG 3 cut(s) 937, 2100, 2298
EcoT14I CCWWGG 2 cut(s) 2227, 2245
EcoT22I ATGCAT 1 cut(s) 295
EcoT38I GRGCYC 1 cut(s) 565
ErhI CCWWGG 2 cut(s) 2227, 2245
Esp3I CGTCTC 1 cut(s) 201
FalI AAGNNNNNCTT 4 cut(s) 2336, 2368, 2388, 2420
FaqI GGGAC 3 cut(s) 479, 1180, 1648
FauI CCCGC 1 cut(s) 1791
FauNDI CATATG 1 cut(s) 1006
FblI GTMKAC 1 cut(s) 550
FokI GGATG 4 cut(s) 280, 699, 1439, 1467
FriOI GRGCYC 1 cut(s) 565
FspBI CTAG 5 cut(s) 216, 708, 1299, 1548, 1587
GlaI GCGC 3 cut(s) 1281, 1626, 2163
GsuI CTGGAG 1 cut(s) 2453
HaeII RGCGCY 1 cut(s) 1628
HaeIII GGCC 6 cut(s) 1370, 1591, 1858, 2055, 2100, 2210
HapII CCGG 6 cut(s) 182, 224, 234, 252, 895, 2309
HgaI GACGC 1 cut(s) 476
HhaI GCGC 3 cut(s) 1282, 1627, 2164
Hin6I GCGC 3 cut(s) 1280, 1625, 2162
HinP1I GCGC 3 cut(s) 1280, 1625, 2162
HindIII AAGCTT 2 cut(s) 132, 1049
HinfI GANTC 9 cut(s) 361, 952, 1605, 1614, 1822, 2065, 2269, 2327, 2471
HpaII CCGG 6 cut(s) 182, 224, 234, 252, 895, 2309
HphI GGTGA 1 cut(s) 1406
Hpy166II GTNNAC 2 cut(s) 416, 551
Hpy8I GTNNAC 2 cut(s) 416, 551
HpyAV CCTTC 9 cut(s) 80, 418, 551, 738, 1091, 1275, 1499, 1584, 2226
HpyCH4III ACNGT 6 cut(s) 280, 922, 1520, 1702, 1942, 2123
HpyCH4IV ACGT 2 cut(s) 194, 401
HpyF10VI GCNNNNNNNGC 7 cut(s) 131, 827, 860, 1144, 1292, 1815, 2321
HpyF3I CTNAG 7 cut(s) 366, 374, 668, 1748, 1958, 2168, 2448
HpySE526I ACGT 2 cut(s) 194, 401
HspAI GCGC 3 cut(s) 1280, 1625, 2162
Kzo9I GATC 8 cut(s) 100, 387, 396, 454, 910, 1570, 2032, 2059
LmnI GCTCC 3 cut(s) 254, 560, 787
Lsp1109I GCAGC 9 cut(s) 700, 1229, 1232, 1514, 1827, 2146, 2151, 2324, 2413
LweI GCATC 6 cut(s) 18, 280, 302, 379, 474, 1993
MabI ACCWGGT 1 cut(s) 2298
MaeI CTAG 5 cut(s) 216, 708, 1299, 1548, 1587
MaeII ACGT 2 cut(s) 194, 401
MaeIII GTNAC 5 cut(s) 284, 1211, 1362, 1440, 1712
MalI GATC 8 cut(s) 102, 389, 398, 456, 912, 1572, 2034, 2061
MbiI CCGCTC 1 cut(s) 2006
MboI GATC 8 cut(s) 100, 387, 396, 454, 910, 1570, 2032, 2059
MfeI CAATTG 3 cut(s) 50, 1810, 2375
MhlI GDGCHC 2 cut(s) 251, 565
MlsI TGGCCA 3 cut(s) 1370, 2100, 2210
MluNI TGGCCA 3 cut(s) 1370, 2100, 2210
MlyI GAGTC 4 cut(s) 961, 1599, 1623, 2336
MmeI TCCRAC 2 cut(s) 336, 895
MnlI CCTC 8 cut(s) 793, 795, 832, 835, 1470, 2105, 2163, 2434
Mox20I TGGCCA 3 cut(s) 1370, 2100, 2210
Mph1103I ATGCAT 1 cut(s) 295
MroXI GAANNNNTTC 2 cut(s) 1760, 1796
MscI TGGCCA 3 cut(s) 1370, 2100, 2210
MseI TTAA 3 cut(s) 228, 405, 2285
MslI CAYNNNNRTG 2 cut(s) 621, 696
Msp20I TGGCCA 3 cut(s) 1370, 2100, 2210
MspA1I CMGCKG 1 cut(s) 2315
MspI CCGG 6 cut(s) 182, 224, 234, 252, 895, 2309
MspR9I CCNGG 4 cut(s) 253, 939, 2102, 2300
MunI CAATTG 3 cut(s) 50, 1810, 2375
MvaI CCWGG 3 cut(s) 939, 2102, 2300
MwoI GCNNNNNNNGC 7 cut(s) 131, 827, 860, 1144, 1292, 1815, 2321
NciI CCSGG 1 cut(s) 253
NdeI CATATG 1 cut(s) 1006
NdeII GATC 8 cut(s) 100, 387, 396, 454, 910, 1570, 2032, 2059
NlaIV GGNNCC 3 cut(s) 268, 1664, 2422
NmeAIII GCCGAG 1 cut(s) 2243
NmuCI GTSAC 3 cut(s) 284, 1362, 1712
NsiI ATGCAT 1 cut(s) 295
NspI RCATGY 5 cut(s) 695, 889, 1286, 1382, 1411
PaeI GCATGC 2 cut(s) 695, 1286
PaeR7I CTCGAG 2 cut(s) 564, 797
PceI AGGCCT 1 cut(s) 1591
PciI ACATGT 2 cut(s) 1378, 1407
PcsI WCGNNNNNNNCGW 2 cut(s) 294, 398
PdmI GAANNNNTTC 2 cut(s) 1760, 1796
PfeI GAWTC 5 cut(s) 361, 1822, 2065, 2269, 2471
PfoI TCCNGGA 1 cut(s) 251
PleI GAGTC 4 cut(s) 960, 1599, 1622, 2335
PpsI GAGTC 4 cut(s) 960, 1599, 1622, 2335
PpuMI RGGWCCY 1 cut(s) 1662
PscI ACATGT 2 cut(s) 1378, 1407
PsiI TTATAA 2 cut(s) 756, 1601
Psp124BI GAGCTC 1 cut(s) 565
Psp5II RGGWCCY 1 cut(s) 1662
Psp6I CCWGG 3 cut(s) 937, 2100, 2298
PspGI CCWGG 3 cut(s) 937, 2100, 2298
PspN4I GGNNCC 3 cut(s) 268, 1664, 2422
PspPI GGNCC 6 cut(s) 267, 935, 1538, 1662, 1856, 2128
PspPPI RGGWCCY 1 cut(s) 1662
PspXI VCTCGAGB 1 cut(s) 564
PstI CTGCAG 2 cut(s) 1250, 1661
PstNI CAGNNNCTG 1 cut(s) 604
PvuII CAGCTG 1 cut(s) 2315
RsaI GTAC 9 cut(s) 643, 1072, 1510, 1517, 1733, 2120, 2225, 2387, 2445
RsaNI GTAC 9 cut(s) 642, 1071, 1509, 1516, 1732, 2119, 2224, 2386, 2444
RseI CAYNNNNRTG 2 cut(s) 621, 696
SacI GAGCTC 1 cut(s) 565
SaqAI TTAA 3 cut(s) 228, 405, 2285
Sau3AI GATC 8 cut(s) 100, 387, 396, 454, 910, 1570, 2032, 2059
Sau96I GGNCC 6 cut(s) 267, 935, 1538, 1662, 1856, 2128
SchI GAGTC 4 cut(s) 961, 1599, 1623, 2336
ScrFI CCNGG 4 cut(s) 253, 939, 2102, 2300
SduI GDGCHC 2 cut(s) 251, 565
SexAI ACCWGGT 1 cut(s) 2298
SfaNI GCATC 6 cut(s) 18, 280, 302, 379, 474, 1993
SfcI CTRYAG 6 cut(s) 1205, 1246, 1593, 1657, 1804, 2202
Sfr274I CTCGAG 2 cut(s) 564, 797
SinI GGWCC 5 cut(s) 267, 935, 1538, 1662, 2128
SlaI CTCGAG 2 cut(s) 564, 797
SmiMI CAYNNNNRTG 2 cut(s) 621, 696
SmlI CTYRAG 4 cut(s) 564, 797, 1461, 1609
SmoI CTYRAG 4 cut(s) 564, 797, 1461, 1609
SphI GCATGC 2 cut(s) 695, 1286
SseBI AGGCCT 1 cut(s) 1591
SsiI CCGC 5 cut(s) 749, 1036, 1295, 1784, 2006
SspI AATATT 2 cut(s) 1920, 2412
SspMI CTAG 5 cut(s) 216, 708, 1299, 1548, 1587
SstI GAGCTC 1 cut(s) 565
StuI AGGCCT 1 cut(s) 1591
StyD4I CCNGG 4 cut(s) 251, 937, 2100, 2298
StyI CCWWGG 2 cut(s) 2227, 2245
TaaI ACNGT 6 cut(s) 280, 922, 1520, 1702, 1942, 2123
TaiI ACGT 2 cut(s) 197, 404
TaqI TCGA 9 cut(s) 326, 380, 565, 659, 798, 1315, 1523, 1944, 1972
TatI WGTACW 2 cut(s) 641, 2118
TauI GCSGC 2 cut(s) 1298, 2009
TfiI GAWTC 5 cut(s) 361, 1822, 2065, 2269, 2471
Tru1I TTAA 3 cut(s) 228, 405, 2285
Tru9I TTAA 3 cut(s) 228, 405, 2285
TscAI CASTG 3 cut(s) 925, 1371, 1724
TseFI GTSAC 3 cut(s) 284, 1362, 1712
TseI GCWGC 9 cut(s) 688, 1242, 1245, 1527, 1815, 2159, 2164, 2312, 2401
Tsp45I GTSAC 3 cut(s) 284, 1362, 1712
TspDTI ATGAA 3 cut(s) 99, 1315, 1460
TspGWI ACGGA 2 cut(s) 286, 923
TspRI CASTG 3 cut(s) 925, 1371, 1724
VpaK11BI GGWCC 5 cut(s) 267, 935, 1538, 1662, 2128
XapI RAATTY 5 cut(s) 428, 1487, 1685, 1840, 2140
XceI RCATGY 5 cut(s) 695, 889, 1286, 1382, 1411
XhoI CTCGAG 2 cut(s) 564, 797
XmiI GTMKAC 1 cut(s) 550
XmnI GAANNNNTTC 2 cut(s) 1760, 1796
XspI CTAG 5 cut(s) 216, 708, 1299, 1548, 1587
Zsp2I ATGCAT 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.