MD04G1122100.v1.1

TPL-binding domain in jasmonate signalling

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0009150
Physical Location & Seq
Reverse (-)
20778363 .. 20785214
6852 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1122100.v1.1.491

Sequence Viewer

Length: 2514 bp
ATGGGTGAAGAGGCAATTTGTGTGGGGAAATTGAGAGATGGGGAAGTGGAAACAGAAAACTCCCCGAGAGCTGAATTGAAGCGAGAGCACGAGTGTCTCGGAGATGATAGCGCGGCAGATTCGTTTCCAAACAAGAAGCAAGTGAAGGAGCATTCCAATGAGGATATACGTTCGGAAGTATCAAACCCCGTTGTGTCTCCGAAAGAGAATGGCTCCACTTTTCAGGACATTACTAGCCAACCTGCTGAATTGGTAAATAATAACCGAACAGAGTGCGCTGAAGTTGAGTCCTCATGTTCGGGGAATCCAGGCTCTGAGGAGACCTTGAGCGATGGACAGTGTACCGTGAATGATAATTGCCAAATTGAGAATGAGACGAATGGTGATGTATTGACCTCTCGGGTTGTGGTTGAAATTCCTAAGCTTGCCAGTTCATCTGGGATTCGCAAGATTACGTTCAAATTCAGCAAGAAAAAGGAGGATTGTGACTCTTCACATGGAAATGCTTATGAGGAGTCCGGAATGGACTTTCAGGCAACGGCTAGTACAAGTAGGGAGTTTCCAGCAAGTTCATATTGGAGGCAGTGTGCTGAATCCGGTAACTTTCATCCTTGTGCTTCTAATTGGGAGTTGGAAGGTTCTACTAATGTAGTTCCGAGCAGCTATCCTTCAAATGTTAAAAAGCTATTGTCCACTGGTATTCTTGATGGGGCTCGAGTGAAGTATGTTTCCTCCCCGCCAAAGATAGAGCTACATGGAATTATAAGTGGCGGTGGTTATTTGTGCGGCTGCTTATCATGCAATTTCACCAGGGTACTCAGTGCATATGAGTTTGAGCAGCATGCTGGTGTCAAGACTCGGCATCCTAATAATCACATATACATGGAGAATGGGAGGCCAGTTTATAGCATCATACAAGAACTGAAGACTGCTCCTCTAAGCAGTCTGGATGAAGTGATAAAGGATATTGCTGGTTCTGCTCTCAACGAAGAGTCCTTCCGGATTTGGAAAGCAACTCTTTATTGTATTGATGGAATGGCTGAAGTGGAGAAAAGACATCGTGTGAAGCTCCCTAAATTGCCTCATCCAGTTCCCAGACCAAGCTTCCATGCAACTATGAACCAGAAGAAAACTGCTGAAGGTGGCAATAGGAGAAGGGATAATGATCTTCACCGGTTACTATTTATGCCAAATGGACTTCCAGATGGAGCTAAATTGGCATACTATGTCAAAGGGCAGAGATTGCTTGGTGGCTATAAGCAAGGAAATGGGATAGTCTGTAATTGCTGTGACAAAGAGATAAGCCCTTCACAGTTTGAAGCTCATGCTGGAATGGCTGCAAGGCGTCAACCCTACCGTCACATCTATACTTCCAATGGATTGACACTTCACGATATAGCCATGTCATTGGCCAATGGGCAAAACCTGACAATTGGTGGCAGTGATGGAAATGATGATATGTGTGCTGTGTGTGGACATGATACAGGGGATTTGATTTTCTGTGATGGATGCCCTCGTGCTTATCATTCAGCTTGTTTGGATTTACCATTGGTTCCTCAAGGTGATTGGCATTGTCCAGATTGTAGAGATAAGTTTGAACCTGGTAAAAAGGCTGCTGCTGGGGAATCTTCAAATATTGGAAGACCTATTGTAATACGTTTGACACGGGTCTTCAATGCACCTGAGTATGAAATTGGTGGCTGCGTTGTTTGCAGGAGCCAAGATTTCAGTGCAGCTTTGTTTGATGAACGAACGGTTATAATCTGTGACCAGTGTGAGAAGGAGTTCCATGTGGGTTGCTTACGGGACAGTGGATTATGTGACTTAAAAGAACTCCCCAAAGATAAATGGTTTTGTTGTGATGACTGTAATAGGATTCATTCAGCTTTACAGAATTTAGTATTCAATGGAGCAGAGCGTGTTCCAGCTCCATTATCAGATACAATAATCCGGAAGCATGCAGATAGAGGTTTGCTTATTGATGGAGTGGCAGATGTTCAATGGCGAGTTTTCAGTGGAAAGAGTCGCTATCCGGAACACCTACCCTTCCTTTCAAGGGCTGCTGCTATTTTTCGAGAGTGCTTTGACCCTATTGTTGCACAGTCTGGTCGCGACTTGATCCCTGTTATGGTATATGGGAGAAATATTTCAGGTCAAGAGTTTGGAGGCATGTACTGTGTTGTTTTGATAGTGGGGTCTGTTGTTATATCTGCTGGTCTCCTTAGGGTTTTTGGTCGGGAGGTTGCTGAGCTTCCGATCGTTGCTACTAGTAGAGAACATCAAGGAAAAGGTTACTTCCAAGCACTATTTTCATGTATAGAGAGGTTACTTATTTCCCTGAAAGTGGAAAAACTGGTTCTCCCCGCGGCTGAGGAAGCCGAGTCAATCTGGACGAGGAAGTTAGGATTTAGAAAGATGAGAGATGAGCAATTATCGAAATACATGAGAGATGTGCAGTTGACAATTTTCCGAGGGACGTCAATGCTAGAGAAGGCAGTGAAGTTGACGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas PHD

Protein Analysis

838

Amino Acids

92.47

Weight (kDa)

6.02

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TDBD PF16135 253 - 307 2.1e-13 Tify domain binding domain
TDBD PF16135 421 - 466 1.4e-13 Tify domain binding domain
PHD-1st_NSD PF23011 485 - 529 3.6e-06 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1
PHD PF00628 488 - 528 1.5e-08 PHD-finger
IDM1_C PF23209 695 - 831 4e-51 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 764, 1760
AatII GACGTC 1 cut(s) 2480
Acc36I ACCTGC 1 cut(s) 250
AccII CGCG 3 cut(s) 113, 2112, 2366
AccIII TCCGGA 4 cut(s) 518, 999, 1950, 2032
AciI CCGC 6 cut(s) 113, 737, 771, 786, 2364, 2366
AclWI GGATC 1 cut(s) 2113
AcoI YGGCCR 1 cut(s) 1410
AcsI RAATTY 3 cut(s) 414, 461, 1894
AcuI CTGAAG 4 cut(s) 300, 944, 1062, 1158
AcyI GRCGYC 2 cut(s) 1345, 2477
AfaI GTAC 4 cut(s) 343, 547, 816, 2174
AfiI CCNNNNNNNGG 3 cut(s) 2056, 2128, 2344
AgeI ACCGGT 1 cut(s) 1173
AhlI ACTAGT 1 cut(s) 2267
AjnI CCWGG 3 cut(s) 307, 809, 1600
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 5 cut(s) 101, 201, 314, 368, 2222
AlwI GGATC 1 cut(s) 2113
AlwNI CAGNNNCTG 1 cut(s) 314
Ama87I CYCGRG 3 cut(s) 64, 399, 714
Aor13HI TCCGGA 4 cut(s) 518, 999, 1950, 2032
AoxI GGCC 2 cut(s) 896, 1410
ApoI RAATTY 3 cut(s) 414, 461, 1894
AsiGI ACCGGT 1 cut(s) 1173
Asp700I GAANNNNTTC 2 cut(s) 1784, 2146
AspLEI GCGC 2 cut(s) 113, 278
AsuHPI GGTGA 5 cut(s) 17, 395, 799, 1163, 1574
AvaI CYCGRG 3 cut(s) 64, 399, 714
AxyI CCTNAGG 1 cut(s) 2222
BalI TGGCCA 1 cut(s) 1412
BanII GRGCYC 1 cut(s) 715
BauI CACGAG 2 cut(s) 89, 1515
BbsI GAAGAC 3 cut(s) 932, 1648, 1663
Bbv12I GWGCWC 1 cut(s) 90
BbvCI CCTCAGC 1 cut(s) 2370
BccI CCATC 8 cut(s) 32, 326, 701, 1025, 1199, 1439, 1499, 1976
BceAI ACGGC 1 cut(s) 555
BcgI CGANNNNNNTGC 2 cut(s) 255, 289
BciT130I CCWGG 3 cut(s) 309, 811, 1602
BcoDI GTCTC 5 cut(s) 101, 201, 314, 368, 2222
BcuI ACTAGT 1 cut(s) 2267
BfaI CTAG 4 cut(s) 234, 543, 2268, 2486
BfuAI ACCTGC 1 cut(s) 250
BlpI GCTNAGC 1 cut(s) 2247
Bme1390I CCNGG 3 cut(s) 309, 811, 1602
BmeT110I CYCGRG 3 cut(s) 64, 399, 714
BmiI GGNNCC 3 cut(s) 214, 1554, 1718
BmrFI CCNGG 3 cut(s) 309, 811, 1602
BmsI GCATC 3 cut(s) 871, 918, 1499
BoxI GACNNNNGTC 1 cut(s) 1667
BpiI GAAGAC 3 cut(s) 932, 1648, 1663
BplI GAGNNNNNCTC 2 cut(s) 197, 229
Bpu10I CCTNAGC 2 cut(s) 420, 2370
Bpu1102I GCTNAGC 1 cut(s) 2247
BpuEI CTTGAG 2 cut(s) 346, 1542
BsaBI GATNNNNATC 1 cut(s) 1164
BsaHI GRCGYC 2 cut(s) 1345, 2477
BsaI GGTCTC 2 cut(s) 314, 2222
BsaJI CCNNGG 3 cut(s) 810, 2364, 2470
BsaWI WCCGGW 6 cut(s) 518, 596, 999, 1173, 1950, 2032
BsaXI ACNNNNNCTCC 4 cut(s) 571, 601, 2343, 2373
Bsc4I CCNNNNNNNGG 3 cut(s) 2056, 2128, 2344
Bse118I RCCGGY 1 cut(s) 1173
Bse1I ACTGG 6 cut(s) 429, 700, 899, 1088, 1771, 2358
Bse21I CCTNAGG 1 cut(s) 2222
Bse8I GATNNNNATC 1 cut(s) 1164
BseAI TCCGGA 4 cut(s) 518, 999, 1950, 2032
BseBI CCWGG 3 cut(s) 309, 811, 1602
BseDI CCNNGG 3 cut(s) 810, 2364, 2470
BseGI GGATG 5 cut(s) 607, 862, 955, 1084, 1514
BseJI GATNNNNATC 1 cut(s) 1164
BseLI CCNNNNNNNGG 3 cut(s) 2056, 2128, 2344
BseMII CTCAG 5 cut(s) 306, 832, 1674, 2238, 2361
BseNI ACTGG 6 cut(s) 429, 700, 899, 1088, 1771, 2358
BseRI GAGGAG 3 cut(s) 332, 527, 924
BseYI CCCAGC 1 cut(s) 1619
BsgI GTGCAG 2 cut(s) 1752, 2474
Bsh1236I CGCG 3 cut(s) 113, 2112, 2366
Bsh1285I CGRYCG 1 cut(s) 2259
BshFI GGCC 2 cut(s) 898, 1412
BshTI ACCGGT 1 cut(s) 1173
BsiEI CGRYCG 1 cut(s) 2259
BsiHKAI GWGCWC 1 cut(s) 90
BsiHKCI CYCGRG 3 cut(s) 64, 399, 714
BsiSI CCGG 6 cut(s) 519, 597, 1000, 1174, 1951, 2033
BslFI GGGAC 2 cut(s) 1820, 2488
BslI CCNNNNNNNGG 3 cut(s) 2056, 2128, 2344
BsmAI GTCTC 5 cut(s) 101, 201, 314, 368, 2222
BsmBI CGTCTC 1 cut(s) 368
BsmFI GGGAC 2 cut(s) 1820, 2488
BsmI GAATGC 1 cut(s) 151
BsnI GGCC 2 cut(s) 898, 1412
Bso31I GGTCTC 2 cut(s) 314, 2222
BsoBI CYCGRG 3 cut(s) 64, 399, 714
Bsp1286I GDGCHC 2 cut(s) 90, 715
Bsp13I TCCGGA 4 cut(s) 518, 999, 1950, 2032
Bsp143I GATC 3 cut(s) 1165, 2118, 2256
Bsp1720I GCTNAGC 1 cut(s) 2247
Bsp68I TCGCGA 1 cut(s) 2112
BspACI CCGC 6 cut(s) 113, 737, 771, 786, 2364, 2366
BspANI GGCC 2 cut(s) 898, 1412
BspCNI CTCAG 5 cut(s) 307, 831, 1675, 2239, 2362
BspEI TCCGGA 4 cut(s) 518, 999, 1950, 2032
BspFNI CGCG 3 cut(s) 113, 2112, 2366
BspLI GGNNCC 3 cut(s) 214, 1554, 1718
BspMI ACCTGC 1 cut(s) 250
BspPI GGATC 1 cut(s) 2113
BspTNI GGTCTC 2 cut(s) 314, 2222
BsrFI RCCGGY 1 cut(s) 1173
BsrI ACTGG 6 cut(s) 429, 700, 899, 1088, 1771, 2358
BssAI RCCGGY 1 cut(s) 1173
BssECI CCNNGG 3 cut(s) 810, 2364, 2470
BssMI GATC 3 cut(s) 1165, 2118, 2256
BssNI GRCGYC 2 cut(s) 1345, 2477
BssSI CACGAG 2 cut(s) 89, 1515
Bst2BI CACGAG 2 cut(s) 89, 1515
Bst2UI CCWGG 3 cut(s) 309, 811, 1602
Bst4CI ACNGT 9 cut(s) 339, 346, 1314, 1358, 1756, 1811, 1868, 2103, 2177
Bst6I CTCTTC 3 cut(s) 3, 496, 984
BstACI GRCGYC 2 cut(s) 1345, 2477
BstAPI GCANNNNNTGC 1 cut(s) 1243
BstC8I GCNNGC 3 cut(s) 426, 843, 1959
BstDEI CTNAG 8 cut(s) 315, 420, 818, 938, 1683, 2222, 2247, 2370
BstDSI CCRYGG 1 cut(s) 2364
BstF5I GGATG 5 cut(s) 607, 862, 955, 1084, 1514
BstFNI CGCG 3 cut(s) 113, 2112, 2366
BstHHI GCGC 2 cut(s) 113, 278
BstKTI GATC 3 cut(s) 1168, 2121, 2259
BstMAI GTCTC 5 cut(s) 101, 201, 314, 368, 2222
BstMBI GATC 3 cut(s) 1165, 2118, 2256
BstMCI CGRYCG 1 cut(s) 2259
BstMWI GCNNNNNNNGC 7 cut(s) 798, 977, 1217, 1243, 1334, 1710, 2375
BstNI CCWGG 3 cut(s) 309, 811, 1602
BstNSI RCATGY 3 cut(s) 845, 1961, 2173
BstPAI GACNNNNGTC 1 cut(s) 1667
BstSCI CCNGG 3 cut(s) 307, 809, 1600
BstUI CGCG 3 cut(s) 113, 2112, 2366
BstV2I GAAGAC 3 cut(s) 932, 1648, 1663
BstXI CCANNNNNNTGG 1 cut(s) 1408
Bsu36I CCTNAGG 1 cut(s) 2222
BsuRI GGCC 2 cut(s) 898, 1412
BtgI CCRYGG 1 cut(s) 2364
BtgZI GCGATG 1 cut(s) 345
BtsCI GGATG 5 cut(s) 607, 862, 955, 1084, 1514
BtsI GCAGTG 3 cut(s) 590, 1447, 2502
BtuMI TCGCGA 1 cut(s) 2112
BveI ACCTGC 1 cut(s) 250
Cac8I GCNNGC 3 cut(s) 426, 843, 1959
CaiI CAGNNNCTG 1 cut(s) 314
CfoI GCGC 2 cut(s) 113, 278
Cfr10I RCCGGY 1 cut(s) 1173
Cfr42I CCGCGG 1 cut(s) 2367
CseI GACGC 1 cut(s) 1334
CsiI ACCWGGT 1 cut(s) 1600
Csp6I GTAC 4 cut(s) 342, 546, 815, 2173
CspAI ACCGGT 1 cut(s) 1173
CspCI CAANNNNNGTGG 1 cut(s) 38
CviQI GTAC 4 cut(s) 342, 546, 815, 2173
DdeI CTNAG 8 cut(s) 315, 420, 818, 938, 1683, 2222, 2247, 2370
DpnI GATC 3 cut(s) 1167, 2120, 2258
DpnII GATC 3 cut(s) 1165, 2118, 2256
EaeI YGGCCR 1 cut(s) 1410
Eam1104I CTCTTC 3 cut(s) 3, 496, 984
EarI CTCTTC 3 cut(s) 3, 496, 984
Eco24I GRGCYC 1 cut(s) 715
Eco31I GGTCTC 2 cut(s) 314, 2222
Eco57I CTGAAG 4 cut(s) 300, 944, 1062, 1158
Eco81I CCTNAGG 1 cut(s) 2222
Eco88I CYCGRG 3 cut(s) 64, 399, 714
EcoRII CCWGG 3 cut(s) 307, 809, 1600
EcoT38I GRGCYC 1 cut(s) 715
Esp3I CGTCTC 1 cut(s) 368
FalI AAGNNNNNCTT 2 cut(s) 1002, 1034
FaqI GGGAC 2 cut(s) 1820, 2488
FauI CCCGC 2 cut(s) 744, 2371
FauNDI CATATG 1 cut(s) 826
FokI GGATG 5 cut(s) 594, 849, 962, 1071, 1521
FriOI GRGCYC 1 cut(s) 715
FspBI CTAG 4 cut(s) 234, 543, 2268, 2486
GlaI GCGC 2 cut(s) 112, 277
GsaI CCCAGC 1 cut(s) 1623
HaeIII GGCC 2 cut(s) 898, 1412
HapII CCGG 6 cut(s) 519, 597, 1000, 1174, 1951, 2033
HgaI GACGC 1 cut(s) 1334
HhaI GCGC 2 cut(s) 113, 278
Hin1I GRCGYC 2 cut(s) 1345, 2477
Hin6I GCGC 2 cut(s) 111, 276
HinP1I GCGC 2 cut(s) 111, 276
HincII GTYRAC 3 cut(s) 1349, 2460, 2505
HindII GTYRAC 3 cut(s) 1349, 2460, 2505
HindIII AAGCTT 2 cut(s) 422, 1102
HpaII CCGG 6 cut(s) 519, 597, 1000, 1174, 1951, 2033
HphI GGTGA 5 cut(s) 17, 395, 799, 1163, 1574
Hpy166II GTNNAC 6 cut(s) 342, 693, 1349, 1475, 2460, 2505
Hpy188I TCNGA 8 cut(s) 101, 175, 201, 316, 657, 1939, 2256, 2471
Hpy8I GTNNAC 6 cut(s) 342, 693, 1349, 1475, 2460, 2505
HpyCH4III ACNGT 9 cut(s) 339, 346, 1314, 1358, 1756, 1811, 1868, 2103, 2177
HpyCH4IV ACGT 4 cut(s) 169, 455, 1657, 2477
HpyF10VI GCNNNNNNNGC 7 cut(s) 798, 977, 1217, 1243, 1334, 1710, 2375
HpyF3I CTNAG 8 cut(s) 315, 420, 818, 938, 1683, 2222, 2247, 2370
HpySE526I ACGT 4 cut(s) 169, 455, 1657, 2477
Hsp92I GRCGYC 2 cut(s) 1345, 2477
HspAI GCGC 2 cut(s) 111, 276
Kpn2I TCCGGA 4 cut(s) 518, 999, 1950, 2032
KspI CCGCGG 1 cut(s) 2367
Kzo9I GATC 3 cut(s) 1165, 2118, 2256
LmnI GCTCC 8 cut(s) 148, 218, 937, 1074, 1208, 1716, 1910, 1933
LweI GCATC 3 cut(s) 871, 918, 1499
MabI ACCWGGT 1 cut(s) 1600
MaeI CTAG 4 cut(s) 234, 543, 2268, 2486
MaeII ACGT 4 cut(s) 169, 455, 1657, 2477
MaeIII GTNAC 9 cut(s) 485, 599, 1176, 1289, 1358, 1766, 1820, 2291, 2325
MalI GATC 3 cut(s) 1167, 2120, 2258
MboI GATC 3 cut(s) 1165, 2118, 2256
MboII GAAGA 9 cut(s) 20, 483, 937, 1001, 1138, 1160, 1620, 1653, 1663
MfeI CAATTG 1 cut(s) 1431
MhlI GDGCHC 2 cut(s) 90, 715
MlsI TGGCCA 1 cut(s) 1412
MluNI TGGCCA 1 cut(s) 1412
MlyI GAGTC 7 cut(s) 296, 482, 524, 850, 1001, 2032, 2390
MmeI TCCRAC 1 cut(s) 612
Mox20I TGGCCA 1 cut(s) 1412
MroI TCCGGA 4 cut(s) 518, 999, 1950, 2032
MroXI GAANNNNTTC 2 cut(s) 1784, 2146
MscI TGGCCA 1 cut(s) 1412
MseI TTAA 2 cut(s) 678, 1826
MslI CAYNNNNRTG 5 cut(s) 156, 501, 612, 846, 881
Msp20I TGGCCA 1 cut(s) 1412
MspA1I CMGCKG 1 cut(s) 2366
MspI CCGG 6 cut(s) 519, 597, 1000, 1174, 1951, 2033
MspR9I CCNGG 3 cut(s) 309, 811, 1602
MunI CAATTG 1 cut(s) 1431
Mva1269I GAATGC 1 cut(s) 151
MvaI CCWGG 3 cut(s) 309, 811, 1602
MvnI CGCG 3 cut(s) 113, 2112, 2366
MwoI GCNNNNNNNGC 7 cut(s) 798, 977, 1217, 1243, 1334, 1710, 2375
NdeI CATATG 1 cut(s) 826
NdeII GATC 3 cut(s) 1165, 2118, 2256
NlaIV GGNNCC 3 cut(s) 214, 1554, 1718
NmeAIII GCCGAG 2 cut(s) 838, 2404
NmuCI GTSAC 5 cut(s) 485, 1289, 1358, 1766, 1820
NruI TCGCGA 1 cut(s) 2112
NspI RCATGY 3 cut(s) 845, 1961, 2173
PaeI GCATGC 2 cut(s) 845, 1961
PaeR7I CTCGAG 1 cut(s) 714
PctI GAATGC 1 cut(s) 151
PdmI GAANNNNTTC 2 cut(s) 1784, 2146
PfeI GAWTC 6 cut(s) 119, 304, 442, 593, 1625, 1876
PinAI ACCGGT 1 cut(s) 1173
Ple19I CGATCG 1 cut(s) 2259
PleI GAGTC 7 cut(s) 295, 482, 523, 850, 1000, 2031, 2389
PpsI GAGTC 7 cut(s) 295, 482, 523, 850, 1000, 2031, 2389
PshAI GACNNNNGTC 1 cut(s) 1667
PsiI TTATAA 2 cut(s) 764, 1760
Psp6I CCWGG 3 cut(s) 307, 809, 1600
PspFI CCCAGC 1 cut(s) 1619
PspGI CCWGG 3 cut(s) 307, 809, 1600
PspN4I GGNNCC 3 cut(s) 214, 1554, 1718
PspXI VCTCGAGB 1 cut(s) 714
PstNI CAGNNNCTG 1 cut(s) 314
PvuI CGATCG 1 cut(s) 2259
RruI TCGCGA 1 cut(s) 2112
RsaI GTAC 4 cut(s) 343, 547, 816, 2174
RsaNI GTAC 4 cut(s) 342, 546, 815, 2173
RseI CAYNNNNRTG 5 cut(s) 156, 501, 612, 846, 881
SacII CCGCGG 1 cut(s) 2367
SaqAI TTAA 2 cut(s) 678, 1826
Sau3AI GATC 3 cut(s) 1165, 2118, 2256
SchI GAGTC 7 cut(s) 296, 482, 524, 850, 1001, 2032, 2390
ScrFI CCNGG 3 cut(s) 309, 811, 1602
SduI GDGCHC 2 cut(s) 90, 715
SexAI ACCWGGT 1 cut(s) 1600
SfaNI GCATC 3 cut(s) 871, 918, 1499
Sfr274I CTCGAG 1 cut(s) 714
Sfr303I CCGCGG 1 cut(s) 2367
SgrBI CCGCGG 1 cut(s) 2367
SlaI CTCGAG 1 cut(s) 714
SmiMI CAYNNNNRTG 5 cut(s) 156, 501, 612, 846, 881
SmlI CTYRAG 3 cut(s) 325, 714, 1557
SmoI CTYRAG 3 cut(s) 325, 714, 1557
SpeI ACTAGT 1 cut(s) 2267
SphI GCATGC 2 cut(s) 845, 1961
SsiI CCGC 6 cut(s) 113, 737, 771, 786, 2364, 2366
SspI AATATT 2 cut(s) 1636, 2146
SspMI CTAG 4 cut(s) 234, 543, 2268, 2486
StyD4I CCNGG 3 cut(s) 307, 809, 1600
TaaI ACNGT 9 cut(s) 339, 346, 1314, 1358, 1756, 1811, 1868, 2103, 2177
TaiI ACGT 4 cut(s) 172, 458, 1660, 2480
TaqI TCGA 3 cut(s) 715, 2074, 2435
TatI WGTACW 2 cut(s) 545, 2172
TauI GCSGC 3 cut(s) 116, 789, 2369
TfiI GAWTC 6 cut(s) 119, 304, 442, 593, 1625, 1876
Tru1I TTAA 2 cut(s) 678, 1826
Tru9I TTAA 2 cut(s) 678, 1826
TseFI GTSAC 5 cut(s) 485, 1289, 1358, 1766, 1820
Tsp45I GTSAC 5 cut(s) 485, 1289, 1358, 1766, 1820
TspDTI ATGAA 9 cut(s) 423, 561, 596, 966, 1133, 1704, 1761, 1868, 2301
XapI RAATTY 3 cut(s) 414, 461, 1894
XceI RCATGY 3 cut(s) 845, 1961, 2173
XhoI CTCGAG 1 cut(s) 714
XmnI GAANNNNTTC 2 cut(s) 1784, 2146
XspI CTAG 4 cut(s) 234, 543, 2268, 2486
ZraI GACGTC 1 cut(s) 2478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.