Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009150

Physical Location & Seq

Genomic Coordinates Forward (+)

8755750 .. 8762070

Gene Structure 6321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g14290.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGGGAGAAGAGGATAGATTGGAAAATGGGGGAGTGGAAATCGAGAGCTCTCCAAGAACTGAATTGAAGCGAGACCATCAGTGTCTCGTAGGTGATACTGAGCCGGATTCGTTTCCGAACAAGAAGCAAGCCAAAGAGGTTTCAAATGATGATATACGCTCCGAAGTTTCGAATCCTGTTGTGTCTCCAAAAGAGAATGAGAATGGCTCGAGCTTTCAGGATATTACTAGCCAACCGGCGGAGTTAGCGAATAGTAACCAAGTAGAGTGTGGAGAGGTTACTTCTTCGAGTTTGAGGAGTTCGAGCTCGGAGGAGGAGGAGGAGAGTTTGAGTGTTGGACAGCCTGCCGAGAATGATAATGGCCAGATTGAGACGGAGACCACGGATACTACTCGTGTTGTGGTTGAGATAGATAAGCCGTCTAGTTCATCTGGGATTCGCAAGATCACGTTTAAGTTCAGCAAAAGAAAGGAAGATTATGAGAACCAGTCATTTGCTTCACCGAGTCAGACTGTACATAATGGGTTTGATTGTGACTTTCCCTATGGTGGGGAGCCTAGAACTGACTGTGGAGAAATGGCTAGTAGGAGCTGGGGGTTCCGAGAAAGGTCATATGCTCATGTCAGGGAGGTGGAATCTAACAAGGTTCCGGAGTGCTACCCTAGCAATGTCAAAAAGCTATTAGCTACTGGTATTCTTGATGGAGCTCGAGTGAAGTATATTTCCACTGGGTCACAGGTAAAGCTAGATGGAATTATAAGTGGCGGTGGTTATTTATGTGGTTGTTCATCCTGCAACTACACAAATGTACTCAGTGCATTTGAGTTTGAGCAGCATGCTGGTGTCAAAACTCGCCATCCCAATAACCACATATTCTTGGAGAATGGGAGACCGGTTTATAATATCCTCCAAGAATTGAAGACTGCTCCACTCAACAAGCTGGATGAAGTAATAGAGGCAGTTGCTGGTTCTGCTGTCAATGAAGGGTTCTTCAGGATCTGGAAAGAATCCCTTTACCGATTTGAGGGGGATGAGGTGTATAAAAGACATTCAGTGAAACTTCCTAAAGTGCCTCGGCTTCCTAAGAAGCCCAAGCTTCCTAAATTCCCTCATTCACTTCCCAGATCAAGCTTCCATACTCCTTACTCTGTTATGCACCAGAAGAAAACTGCTGGACGTGGCAATAAGAAAACTAGGGATCATGATCTTCACCGGCTACTGTTCATGCCAAATGGGCTTCCAGATGGGGCCAAATTGGCTTACTATATGAAAGGACAGAGAATACTTGGAGGCTACAAGCACGGAAATGGTATAGTATGTAATTGCTGTAATACAGAGGTAAGCCCTTCACAGTTCGAAGCACATGCTGGAATGTCTGCTAGGCGCCAACCTTACCGTCATATCTATATATCCAATGGATTGACGCTACATGATATAGCCACGTCATTGGCAAATGGACATAACCTTACAACTGGTGCCAGTGATGGAAGTGATGATATGTGTGCAGTATGTGGACATGATACTGGGAAGATGATTCTTTGTGATGGATGCCCTCGTGCTTTTCATGAAGCTTGTTTGGATTCAGAGTGGATTCCTGAAAGCGATTGGCATTGTCCAAATTGTAGAGATAATTTTCAACATGTTAGTAAAGCTGCTGCTGGAGGATCTTCAAGTATTGCAAGACCAATCGTCATACGCTTGACAAGGGAATTCAAAGCACCTGAAATTGAAATTGGTGGTTGTGTCCTCTGTAGGAGCAACGACTTCAGTGCAGCTATATTCGATGAGCGAACAGTTATAATCTGTGACCAATGTGAGAAGGAGTTTCATGTTGGTTGCTTACGGGACAATGGATTATGCGACTTAAAAGAACTCCCCAAGGATAAGTGGTTTTGCTGTGATGATTGTAATAGGATTTTTGAGGCTTTACAGAATATAGTATTCAAAGAAGCAGAGCGGGTTCCAGCTCCATTGTCAGATCCAATAATCAGGAAGCATGCAGATAGAGGTATATTTATTGATGGAGTGGCAGATGATGTTCAATGGAGAATTTTCAGTGGAAAAAGTCGCTGTCCAGAACACCTACCATTTTTATCAAGTGCTGCTGCAATTTTTCGAGAGTGCTTTGACCCCATAGTTGCCAAATCTGGTCGTGATTTGATTCCTGTCATGGTATATGGGAGAAACATTTCAGGCCAAGAGTTTGGAGGAATGTATTGTGTTGTTTTAACAGTGAGGTCTGTTGTTGTATCTGCCGGTCTTCTTAGGATTTTTGGTAGGGAAGTTGCAGAGCTTCCGATTGTGGCTACAAGTAGAGAACATCAAGGAAAAGGTTATTTCCAAGCGTTATTTTCCTGTATAGAGATGTTACTCCTTTCCCTGAAAGTGGAAAAACTGGTTCTCCCTGCTGCTGAGGAAGCCGAGTCAATCTGGACAAAGAAATTAGGGTTTCGCAAGATGAGGGACGAGCAATTATCAAAATATATGAGGGATGTTCAGCTGACGGTTTTCAGGGGGACATCAATGTTAGAAAAGATGGTGCAGTCGATGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Jas PHD

Protein Analysis

852

Amino Acids

94.79

Weight (kDa)

6.13

Isoelectric Point (pI)

49.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TDBD	PF16135	251 - 306	7.7e-14	Tify domain binding domain
TDBD	PF16135	435 - 479	1.1e-13	Tify domain binding domain
PHD	PF00628	501 - 541	4.5e-07	PHD-finger
IDM1_C	PF23209	709 - 845	2.4e-51	Increased DNA methylation 1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009150)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37520 AT3G53680 AT3G53680
fragaria_vesca	FvH4_6g14290 FvH4_6g14290 FvH4_6g14290
malus_domestica	MD04G1122100.v1.1 MD12G1138700.v1.1
prunus_persica	Prupe.6G250600_v2.0.a1
pyrus_communis	pycom04g11070 pycom12g13270
rosa_chinensis	RchiOBHm_Chr3g0467251
rosa_laevigata	RLG00000024514
rosa_multiflora	Rmu_sc0019565.1_g000001
rosa_roxburghii	Rroxscaffold_6G00413780
rosa_rugosa	Rorug03G0086100 Rorug03G0086200
rosa_samantha	Rh3AG134500 Rh3BG155800 Rh3CG155400 Rh3DG156600
rosa_wichuraiana	Rw3G012730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	758, 900, 1799
AccB1I	GGYRCC	2 cut(s)	1383, 1475
AccBSI	CCGCTC	1 cut(s)	1957
AccIII	TCCGGA	1 cut(s)	649
AciI	CCGC	3 cut(s)	239, 765, 1957
AclWI	GGATC	4 cut(s)	1004, 1206, 1672, 1973
AcoI	YGGCCR	1 cut(s)	361
AcsI	RAATTY	3 cut(s)	1103, 1709, 2049
AcuI	CTGAAG	2 cut(s)	976, 1750
AcyI	GRCGYC	1 cut(s)	1384
AfaI	GTAC	2 cut(s)	516, 810
AfiI	CCNNNNNNNGG	5 cut(s)	238, 548, 549, 1024, 2386
AflIII	ACRYGT	1 cut(s)	1639
AgeI	ACCGGT	1 cut(s)	892
AgsI	TTSAA	9 cut(s)	67, 144, 919, 1637, 1671, 1714, 1730, 1945, 2042
AhdI	GACNNNNNGTC	1 cut(s)	1688
AjiI	CACGTC	2 cut(s)	1178, 1443
AjuI	GAANNNNNNNTTGG	2 cut(s)	1716, 1748
Alw21I	GWGCWC	3 cut(s)	50, 308, 709
Alw26I	GTCTC	6 cut(s)	66, 89, 189, 365, 371, 883
AlwI	GGATC	4 cut(s)	1004, 1206, 1672, 1973
AlwNI	CAGNNNCTG	2 cut(s)	965, 999
Ama87I	CYCGRG	2 cut(s)	208, 708
Aor13HI	TCCGGA	1 cut(s)	649
AoxI	GGCC	3 cut(s)	361, 1248, 2194
ApeKI	GCWGC	7 cut(s)	832, 1652, 1655, 1772, 2102, 2105, 2408
ApoI	RAATTY	3 cut(s)	1103, 1709, 2049
AsiGI	ACCGGT	1 cut(s)	892
Asp700I	GAANNNNTTC	1 cut(s)	2188
AspLEI	GCGC	1 cut(s)	1386
AspS9I	GGNCC	1 cut(s)	1248
AsuHPI	GGTGA	3 cut(s)	104, 492, 1202
AsuII	TTCGAA	2 cut(s)	170, 1356
AvaI	CYCGRG	2 cut(s)	208, 708
BalI	TGGCCA	1 cut(s)	363
BanI	GGYRCC	2 cut(s)	1383, 1475
BanII	GRGCYC	3 cut(s)	50, 308, 709
BauI	CACGAG	2 cut(s)	393, 1554
BbsI	GAAGAC	2 cut(s)	926, 2252
Bbv12I	GWGCWC	3 cut(s)	50, 308, 709
BbvCI	CCTCAGC	1 cut(s)	2412
BbvI	GCAGC	7 cut(s)	844, 1639, 1642, 1784, 2089, 2092, 2395
BceAI	ACGGC	1 cut(s)	403
BcgI	CGANNNNNNTGC	4 cut(s)	1346, 1380, 1751, 1785
BciVI	GTATCC	1 cut(s)	379
BcoDI	GTCTC	6 cut(s)	66, 89, 189, 365, 371, 883
BfaI	CTAG	8 cut(s)	228, 423, 558, 582, 663, 746, 1194, 1380
BfmI	CTRYAG	1 cut(s)	1750
BfoI	RGCGCY	1 cut(s)	1387
BfuI	GTATCC	1 cut(s)	379
BglI	GCCNNNNNGGC	2 cut(s)	1234, 1256
BisI	GCNGC	7 cut(s)	833, 1653, 1656, 1773, 2103, 2106, 2409
BlsI	GCNGC	7 cut(s)	834, 1654, 1657, 1774, 2104, 2107, 2410
BmeRI	GACNNNNNGTC	1 cut(s)	1688
BmeT110I	CYCGRG	2 cut(s)	208, 708
BmgBI	CACGTC	2 cut(s)	1178, 1443
BmgT120I	GGNCC	1 cut(s)	1248
BmiI	GGNNCC	7 cut(s)	555, 599, 648, 1249, 1385, 1477, 1962
BmrI	ACTGGG	2 cut(s)	738, 1533
BmsI	GCATC	1 cut(s)	1538
BmuI	ACTGGG	2 cut(s)	738, 1533
BpiI	GAAGAC	2 cut(s)	926, 2252
BplI	GAGNNNNNCTC	2 cut(s)	191, 223
BpmI	CTGGAG	1 cut(s)	1680
Bpu10I	CCTNAGC	1 cut(s)	2412
Bpu14I	TTCGAA	2 cut(s)	170, 1356
BsaBI	GATNNNNATC	1 cut(s)	1203
BsaHI	GRCGYC	1 cut(s)	1384
BsaI	GGTCTC	3 cut(s)	66, 371, 883
BsaJI	CCNNGG	3 cut(s)	381, 1073, 1878
BsaWI	WCCGGW	2 cut(s)	649, 892
BsaXI	ACNNNNNCTCC	4 cut(s)	696, 726, 2385, 2415
Bsc4I	CCNNNNNNNGG	5 cut(s)	238, 548, 549, 1024, 2386
Bse118I	RCCGGY	4 cut(s)	235, 892, 1212, 2255
Bse1I	ACTGG	7 cut(s)	487, 694, 733, 1477, 1479, 1528, 2400
Bse3DI	GCAATG	1 cut(s)	673
Bse8I	GATNNNNATC	1 cut(s)	1203
BseAI	TCCGGA	1 cut(s)	649
BseDI	CCNNGG	3 cut(s)	381, 1073, 1878
BseGI	GGATG	6 cut(s)	788, 856, 949, 1036, 1553, 2497
BseJI	GATNNNNATC	1 cut(s)	1203
BseLI	CCNNNNNNNGG	5 cut(s)	238, 548, 549, 1024, 2386
BseMI	GCAATG	1 cut(s)	673
BseMII	CTCAG	3 cut(s)	90, 826, 2403
BseNI	ACTGG	7 cut(s)	487, 694, 733, 1477, 1479, 1528, 2400
BseRI	GAGGAG	5 cut(s)	310, 326, 329, 332, 335
BseXI	GCAGC	7 cut(s)	844, 1639, 1642, 1784, 2089, 2092, 2395
BseYI	CCCAGC	1 cut(s)	591
BsgI	GTGCAG	2 cut(s)	1524, 1791
BshFI	GGCC	3 cut(s)	363, 1250, 2196
BshNI	GGYRCC	2 cut(s)	1383, 1475
BshTI	ACCGGT	1 cut(s)	892
BsiHKAI	GWGCWC	3 cut(s)	50, 308, 709
BsiHKCI	CYCGRG	2 cut(s)	208, 708
BsiSI	CCGG	6 cut(s)	104, 236, 650, 893, 1213, 2256
BslFI	GGGAC	3 cut(s)	1859, 2477, 2530
BslI	CCNNNNNNNGG	5 cut(s)	238, 548, 549, 1024, 2386
BsmAI	GTCTC	6 cut(s)	66, 89, 189, 365, 371, 883
BsmBI	CGTCTC	1 cut(s)	365
BsmFI	GGGAC	3 cut(s)	1859, 2477, 2530
BsnI	GGCC	3 cut(s)	363, 1250, 2196
Bso31I	GGTCTC	3 cut(s)	66, 371, 883
BsoBI	CYCGRG	2 cut(s)	208, 708
Bsp119I	TTCGAA	2 cut(s)	170, 1356
Bsp1286I	GDGCHC	3 cut(s)	50, 308, 709
Bsp13I	TCCGGA	1 cut(s)	649
Bsp1407I	TGTACA	1 cut(s)	514
Bsp143I	GATC	7 cut(s)	444, 996, 1124, 1198, 1204, 1664, 1978
BspACI	CCGC	3 cut(s)	239, 765, 1957
BspANI	GGCC	3 cut(s)	363, 1250, 2196
BspCNI	CTCAG	3 cut(s)	91, 825, 2404
BspEI	TCCGGA	1 cut(s)	649
BspHI	TCATGA	2 cut(s)	1201, 1564
BspLI	GGNNCC	7 cut(s)	555, 599, 648, 1249, 1385, 1477, 1962
BspPI	GGATC	4 cut(s)	1004, 1206, 1672, 1973
BspT104I	TTCGAA	2 cut(s)	170, 1356
BspT107I	GGYRCC	2 cut(s)	1383, 1475
BspTNI	GGTCTC	3 cut(s)	66, 371, 883
BsrBI	CCGCTC	1 cut(s)	1957
BsrDI	GCAATG	1 cut(s)	673
BsrFI	RCCGGY	4 cut(s)	235, 892, 1212, 2255
BsrGI	TGTACA	1 cut(s)	514
BsrI	ACTGG	7 cut(s)	487, 694, 733, 1477, 1479, 1528, 2400
BssAI	RCCGGY	4 cut(s)	235, 892, 1212, 2255
BssECI	CCNNGG	3 cut(s)	381, 1073, 1878
BssMI	GATC	7 cut(s)	444, 996, 1124, 1198, 1204, 1664, 1978
BssNI	GRCGYC	1 cut(s)	1384
BssSI	CACGAG	2 cut(s)	393, 1554
BssT1I	CCWWGG	1 cut(s)	1878
Bst2BI	CACGAG	2 cut(s)	393, 1554
Bst4CI	ACNGT	8 cut(s)	514, 569, 1221, 1353, 1397, 1795, 2233, 2506
Bst6I	CTCTTC	1 cut(s)	3
BstACI	GRCGYC	1 cut(s)	1384
BstAUI	TGTACA	1 cut(s)	514
BstBI	TTCGAA	2 cut(s)	170, 1356
BstC8I	GCNNGC	4 cut(s)	129, 345, 837, 1998
BstDEI	CTNAG	5 cut(s)	99, 812, 1083, 2264, 2412
BstDSI	CCRYGG	1 cut(s)	381
BstF5I	GGATG	6 cut(s)	788, 856, 949, 1036, 1553, 2497
BstH2I	RGCGCY	1 cut(s)	1387
BstHHI	GCGC	1 cut(s)	1386
BstKTI	GATC	7 cut(s)	447, 999, 1127, 1201, 1207, 1667, 1981
BstMAI	GTCTC	6 cut(s)	66, 89, 189, 365, 371, 883
BstMBI	GATC	7 cut(s)	444, 996, 1124, 1198, 1204, 1664, 1978
BstMWI	GCNNNNNNNGC	6 cut(s)	245, 663, 971, 1234, 1256, 2417
BstNSI	RCATGY	4 cut(s)	839, 1367, 1643, 2000
BstSFI	CTRYAG	1 cut(s)	1750
BstV1I	GCAGC	7 cut(s)	844, 1639, 1642, 1784, 2089, 2092, 2395
BstV2I	GAAGAC	2 cut(s)	926, 2252
BstX2I	RGATCY	3 cut(s)	996, 1664, 1978
BstXI	CCANNNNNNTGG	2 cut(s)	1447, 2204
BstYI	RGATCY	3 cut(s)	996, 1664, 1978
BsuI	GTATCC	1 cut(s)	379
BsuRI	GGCC	3 cut(s)	363, 1250, 2196
BtgI	CCRYGG	1 cut(s)	381
BtrI	CACGTC	2 cut(s)	1178, 1443
BtsCI	GGATG	6 cut(s)	788, 856, 949, 1036, 1553, 2497
BtsIMutI	CAGTG	8 cut(s)	86, 726, 820, 1059, 1486, 1774, 2062, 2238
Cac8I	GCNNGC	4 cut(s)	129, 345, 837, 1998
CaiI	CAGNNNCTG	2 cut(s)	965, 999
CciI	TCATGA	2 cut(s)	1201, 1564
CfoI	GCGC	1 cut(s)	1386
Cfr10I	RCCGGY	4 cut(s)	235, 892, 1212, 2255
Cfr13I	GGNCC	1 cut(s)	1248
CseI	GACGC	1 cut(s)	1432
Csp6I	GTAC	2 cut(s)	515, 809
CspAI	ACCGGT	1 cut(s)	892
CviQI	GTAC	2 cut(s)	515, 809
DdeI	CTNAG	5 cut(s)	99, 812, 1083, 2264, 2412
DinI	GGCGCC	1 cut(s)	1385
DpnI	GATC	7 cut(s)	446, 998, 1126, 1200, 1206, 1666, 1980
DpnII	GATC	7 cut(s)	444, 996, 1124, 1198, 1204, 1664, 1978
DriI	GACNNNNNGTC	1 cut(s)	1688
EaeI	YGGCCR	1 cut(s)	361
Eam1104I	CTCTTC	1 cut(s)	3
Eam1105I	GACNNNNNGTC	1 cut(s)	1688
EarI	CTCTTC	1 cut(s)	3
EciI	GGCGGA	1 cut(s)	254
Ecl136II	GAGCTC	3 cut(s)	48, 306, 707
Eco130I	CCWWGG	1 cut(s)	1878
Eco24I	GRGCYC	3 cut(s)	50, 308, 709
Eco31I	GGTCTC	3 cut(s)	66, 371, 883
Eco53kI	GAGCTC	3 cut(s)	48, 306, 707
Eco57I	CTGAAG	2 cut(s)	976, 1750
Eco88I	CYCGRG	2 cut(s)	208, 708
EcoICRI	GAGCTC	3 cut(s)	48, 306, 707
EcoRI	GAATTC	1 cut(s)	1709
EcoT14I	CCWWGG	1 cut(s)	1878
EcoT38I	GRGCYC	3 cut(s)	50, 308, 709
EgeI	GGCGCC	1 cut(s)	1385
EheI	GGCGCC	1 cut(s)	1385
ErhI	CCWWGG	1 cut(s)	1878
Esp3I	CGTCTC	1 cut(s)	365
FalI	AAGNNNNNCTT	2 cut(s)	996, 1028
FaqI	GGGAC	3 cut(s)	1859, 2477, 2530
FauI	CCCGC	1 cut(s)	1950
FauNDI	CATATG	1 cut(s)	613
Fnu4HI	GCNGC	7 cut(s)	833, 1653, 1656, 1773, 2103, 2106, 2409
FokI	GGATG	6 cut(s)	775, 843, 956, 1043, 1560, 2504
FriOI	GRGCYC	3 cut(s)	50, 308, 709
Fsp4HI	GCNGC	7 cut(s)	833, 1653, 1656, 1773, 2103, 2106, 2409
FspBI	CTAG	8 cut(s)	228, 423, 558, 582, 663, 746, 1194, 1380
GlaI	GCGC	1 cut(s)	1385
GluI	GCNGC	7 cut(s)	833, 1653, 1656, 1773, 2103, 2106, 2409
GsaI	CCCAGC	1 cut(s)	595
GsuI	CTGGAG	1 cut(s)	1680
HaeII	RGCGCY	1 cut(s)	1387
HaeIII	GGCC	3 cut(s)	363, 1250, 2196
HapII	CCGG	6 cut(s)	104, 236, 650, 893, 1213, 2256
HgaI	GACGC	1 cut(s)	1432
HhaI	GCGC	1 cut(s)	1386
Hin1I	GRCGYC	1 cut(s)	1384
Hin6I	GCGC	1 cut(s)	1384
HinP1I	GCGC	1 cut(s)	1384
HindIII	AAGCTT	3 cut(s)	1094, 1129, 1569
HpaII	CCGG	6 cut(s)	104, 236, 650, 893, 1213, 2256
HphI	GGTGA	3 cut(s)	104, 492, 1202
Hpy166II	GTNNAC	1 cut(s)	1514
Hpy188I	TCNGA	8 cut(s)	117, 163, 310, 510, 602, 1585, 1978, 2298
Hpy8I	GTNNAC	1 cut(s)	1514
HpyAV	CCTTC	3 cut(s)	977, 1356, 1813
HpyCH4III	ACNGT	8 cut(s)	514, 569, 1221, 1353, 1397, 1795, 2233, 2506
HpyCH4IV	ACGT	3 cut(s)	449, 1177, 1442
HpyF10VI	GCNNNNNNNGC	6 cut(s)	245, 663, 971, 1234, 1256, 2417
HpyF3I	CTNAG	5 cut(s)	99, 812, 1083, 2264, 2412
HpySE526I	ACGT	3 cut(s)	449, 1177, 1442
Hsp92I	GRCGYC	1 cut(s)	1384
HspAI	GCGC	1 cut(s)	1384
KasI	GGCGCC	1 cut(s)	1383
Kpn2I	TCCGGA	1 cut(s)	649
Kzo9I	GATC	7 cut(s)	444, 996, 1124, 1198, 1204, 1664, 1978
LmnI	GCTCC	7 cut(s)	164, 553, 588, 704, 931, 1755, 1972
Lsp1109I	GCAGC	7 cut(s)	844, 1639, 1642, 1784, 2089, 2092, 2395
LweI	GCATC	1 cut(s)	1538
MaeI	CTAG	8 cut(s)	228, 423, 558, 582, 663, 746, 1194, 1380
MaeII	ACGT	3 cut(s)	449, 1177, 1442
MaeIII	GTNAC	6 cut(s)	254, 277, 533, 732, 1805, 2367
MalI	GATC	7 cut(s)	446, 998, 1126, 1200, 1206, 1666, 1980
MbiI	CCGCTC	1 cut(s)	1957
MboI	GATC	7 cut(s)	444, 996, 1124, 1198, 1204, 1664, 1978
MflI	RGATCY	3 cut(s)	996, 1664, 1978
MhlI	GDGCHC	3 cut(s)	50, 308, 709
MlsI	TGGCCA	1 cut(s)	363
MluNI	TGGCCA	1 cut(s)	363
Mly113I	GGCGCC	1 cut(s)	1384
MlyI	GAGTC	2 cut(s)	514, 2432
MmeI	TCCRAC	1 cut(s)	316
Mox20I	TGGCCA	1 cut(s)	363
MroI	TCCGGA	1 cut(s)	649
MroXI	GAANNNNTTC	1 cut(s)	2188
MscI	TGGCCA	1 cut(s)	363
MseI	TTAA	3 cut(s)	453, 1865, 2228
MslI	CAYNNNNRTG	2 cut(s)	840, 1305
Msp20I	TGGCCA	1 cut(s)	363
MspA1I	CMGCKG	1 cut(s)	2500
MspI	CCGG	6 cut(s)	104, 236, 650, 893, 1213, 2256
MwoI	GCNNNNNNNGC	6 cut(s)	245, 663, 971, 1234, 1256, 2417
NarI	GGCGCC	1 cut(s)	1384
NdeI	CATATG	1 cut(s)	613
NdeII	GATC	7 cut(s)	444, 996, 1124, 1198, 1204, 1664, 1978
NlaIV	GGNNCC	7 cut(s)	555, 599, 648, 1249, 1385, 1477, 1962
NmeAIII	GCCGAG	3 cut(s)	373, 1054, 2446
NmuCI	GTSAC	3 cut(s)	533, 732, 1805
NspI	RCATGY	4 cut(s)	839, 1367, 1643, 2000
NspV	TTCGAA	2 cut(s)	170, 1356
PaeI	GCATGC	2 cut(s)	839, 2000
PaeR7I	CTCGAG	2 cut(s)	208, 708
PagI	TCATGA	2 cut(s)	1201, 1564
PciI	ACATGT	1 cut(s)	1639
PdmI	GAANNNNTTC	1 cut(s)	2188
PfeI	GAWTC	9 cut(s)	107, 172, 436, 635, 1007, 1534, 1580, 1591, 2161
PinAI	ACCGGT	1 cut(s)	892
PkrI	GCNGC	7 cut(s)	834, 1654, 1657, 1774, 2104, 2107, 2410
PleI	GAGTC	2 cut(s)	513, 2431
PluTI	GGCGCC	1 cut(s)	1387
PpsI	GAGTC	2 cut(s)	513, 2431
PscI	ACATGT	1 cut(s)	1639
PsiI	TTATAA	3 cut(s)	758, 900, 1799
Psp124BI	GAGCTC	3 cut(s)	50, 308, 709
PspFI	CCCAGC	1 cut(s)	591
PspN4I	GGNNCC	7 cut(s)	555, 599, 648, 1249, 1385, 1477, 1962
PspPI	GGNCC	1 cut(s)	1248
PspXI	VCTCGAGB	2 cut(s)	208, 708
PstNI	CAGNNNCTG	2 cut(s)	965, 999
PsuI	RGATCY	3 cut(s)	996, 1664, 1978
PvuII	CAGCTG	1 cut(s)	2500
RsaI	GTAC	2 cut(s)	516, 810
RsaNI	GTAC	2 cut(s)	515, 809
RseI	CAYNNNNRTG	2 cut(s)	840, 1305
SacI	GAGCTC	3 cut(s)	50, 308, 709
SaqAI	TTAA	3 cut(s)	453, 1865, 2228
SatI	GCNGC	7 cut(s)	833, 1653, 1656, 1773, 2103, 2106, 2409
Sau3AI	GATC	7 cut(s)	444, 996, 1124, 1198, 1204, 1664, 1978
Sau96I	GGNCC	1 cut(s)	1248
SchI	GAGTC	2 cut(s)	514, 2432
SduI	GDGCHC	3 cut(s)	50, 308, 709
SfaNI	GCATC	1 cut(s)	1538
SfcI	CTRYAG	1 cut(s)	1750
SfoI	GGCGCC	1 cut(s)	1385
Sfr274I	CTCGAG	2 cut(s)	208, 708
SfuI	TTCGAA	2 cut(s)	170, 1356
SlaI	CTCGAG	2 cut(s)	208, 708
SmiMI	CAYNNNNRTG	2 cut(s)	840, 1305
SmlI	CTYRAG	2 cut(s)	208, 708
SmoI	CTYRAG	2 cut(s)	208, 708
SphI	GCATGC	2 cut(s)	839, 2000
SsiI	CCGC	3 cut(s)	239, 765, 1957
SspDI	GGCGCC	1 cut(s)	1383
SspMI	CTAG	8 cut(s)	228, 423, 558, 582, 663, 746, 1194, 1380
SstI	GAGCTC	3 cut(s)	50, 308, 709
StyI	CCWWGG	1 cut(s)	1878
TaaI	ACNGT	8 cut(s)	514, 569, 1221, 1353, 1397, 1795, 2233, 2506
TaiI	ACGT	3 cut(s)	452, 1180, 1445
TatI	WGTACW	2 cut(s)	514, 808
TfiI	GAWTC	9 cut(s)	107, 172, 436, 635, 1007, 1534, 1580, 1591, 2161
Tru1I	TTAA	3 cut(s)	453, 1865, 2228
Tru9I	TTAA	3 cut(s)	453, 1865, 2228
TscAI	CASTG	8 cut(s)	86, 733, 820, 1059, 1486, 1774, 2062, 2238
TseFI	GTSAC	3 cut(s)	533, 732, 1805
TseI	GCWGC	7 cut(s)	832, 1652, 1655, 1772, 2102, 2105, 2408
Tsp45I	GTSAC	3 cut(s)	533, 732, 1805
TspDTI	ATGAA	9 cut(s)	417, 777, 960, 996, 1213, 1283, 1553, 1581, 1817
TspGWI	ACGGA	3 cut(s)	389, 398, 1317
TspRI	CASTG	8 cut(s)	86, 733, 820, 1059, 1486, 1774, 2062, 2238
XapI	RAATTY	3 cut(s)	1103, 1709, 2049
XceI	RCATGY	4 cut(s)	839, 1367, 1643, 2000
XcmI	CCANNNNNNNNNTGG	1 cut(s)	266
XhoI	CTCGAG	2 cut(s)	208, 708
XmnI	GAANNNNTTC	1 cut(s)	2188
XspI	CTAG	8 cut(s)	228, 423, 558, 582, 663, 746, 1194, 1380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.