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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39560 |
| fragaria_vesca | FvH4_7g22100 |
| prunus_persica | Prupe.2G233200_v2.0.a1 |
| pyrus_communis | pycom01g15200 pycom07g18430 |
| rosa_chinensis | RchiOBHm_Chr1g0366491 |
| rosa_laevigata | RLG00000027343 |
| rosa_multiflora | Rmu_sc0012047.1_g000001 Rmu_ssc0000192.1_g000002 Rmu_ssc0000250.1_g000020 |
| rosa_roxburghii | Rroxscaffold_4G00289880 Rroxscaffold_4G00290140 |
| rosa_rugosa | Rorug01G0330400 |
| rosa_samantha | Rh1AG338300 Rh1BG299800 Rh1CG314900 Rh1DG331600 Rh2AG519400 |
| rosa_wichuraiana | Rw1G029950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 107 |
| AcuI | CTGAAG | 1 cut(s) | 384 |
| AflII | CTTAAG | 1 cut(s) | 643 |
| AgsI | TTSAA | 2 cut(s) | 397, 637 |
| AhlI | ACTAGT | 1 cut(s) | 574 |
| AjnI | CCWGG | 2 cut(s) | 148, 301 |
| AluBI | AGCT | 5 cut(s) | 62, 76, 163, 664, 698 |
| AluI | AGCT | 5 cut(s) | 62, 76, 163, 664, 698 |
| Ama87I | CYCGRG | 1 cut(s) | 532 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 111, 143 |
| AspS9I | GGNCC | 1 cut(s) | 299 |
| AsuHPI | GGTGA | 1 cut(s) | 600 |
| AsuII | TTCGAA | 1 cut(s) | 130 |
| AvaI | CYCGRG | 1 cut(s) | 532 |
| AvaII | GGWCC | 1 cut(s) | 299 |
| BauI | CACGAG | 1 cut(s) | 453 |
| BbsI | GAAGAC | 1 cut(s) | 124 |
| BccI | CCATC | 1 cut(s) | 676 |
| BciT130I | CCWGG | 2 cut(s) | 150, 303 |
| BcuI | ACTAGT | 1 cut(s) | 574 |
| BfaI | CTAG | 1 cut(s) | 575 |
| BfrI | CTTAAG | 1 cut(s) | 643 |
| BglII | AGATCT | 2 cut(s) | 5, 528 |
| BlpI | GCTNAGC | 1 cut(s) | 72 |
| Bme1390I | CCNGG | 2 cut(s) | 150, 303 |
| Bme18I | GGWCC | 1 cut(s) | 299 |
| BmeT110I | CYCGRG | 1 cut(s) | 532 |
| BmgT120I | GGNCC | 1 cut(s) | 299 |
| BmiI | GGNNCC | 1 cut(s) | 154 |
| BmrFI | CCNGG | 2 cut(s) | 150, 303 |
| BmsI | GCATC | 2 cut(s) | 547, 640 |
| BpiI | GAAGAC | 1 cut(s) | 124 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 150, 182, 536, 568, 571, 603 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 72 |
| Bpu14I | TTCGAA | 1 cut(s) | 130 |
| BsaJI | CCNNGG | 3 cut(s) | 148, 302, 314 |
| Bse3DI | GCAATG | 1 cut(s) | 491 |
| BseBI | CCWGG | 2 cut(s) | 150, 303 |
| BseDI | CCNNGG | 3 cut(s) | 148, 302, 314 |
| BseGI | GGATG | 2 cut(s) | 548, 655 |
| BseMI | GCAATG | 1 cut(s) | 491 |
| BseMII | CTCAG | 2 cut(s) | 63, 552 |
| BseRI | GAGGAG | 3 cut(s) | 426, 441, 671 |
| BsiHKCI | CYCGRG | 1 cut(s) | 532 |
| BslFI | GGGAC | 1 cut(s) | 36 |
| BsmFI | GGGAC | 1 cut(s) | 36 |
| BsoBI | CYCGRG | 1 cut(s) | 532 |
| Bsp119I | TTCGAA | 1 cut(s) | 130 |
| Bsp143I | GATC | 3 cut(s) | 5, 528, 581 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 72 |
| BspCNI | CTCAG | 2 cut(s) | 64, 553 |
| BspLI | GGNNCC | 1 cut(s) | 154 |
| BspQI | GCTCTTC | 1 cut(s) | 69 |
| BspT104I | TTCGAA | 1 cut(s) | 130 |
| BspTI | CTTAAG | 1 cut(s) | 643 |
| BsrDI | GCAATG | 1 cut(s) | 491 |
| BssECI | CCNNGG | 3 cut(s) | 148, 302, 314 |
| BssMI | GATC | 3 cut(s) | 5, 528, 581 |
| BssSI | CACGAG | 1 cut(s) | 453 |
| Bst2BI | CACGAG | 1 cut(s) | 453 |
| Bst2UI | CCWGG | 2 cut(s) | 150, 303 |
| Bst4CI | ACNGT | 3 cut(s) | 264, 346, 612 |
| Bst6I | CTCTTC | 4 cut(s) | 69, 95, 173, 519 |
| BstAFI | CTTAAG | 1 cut(s) | 643 |
| BstBI | TTCGAA | 1 cut(s) | 130 |
| BstC8I | GCNNGC | 1 cut(s) | 53 |
| BstDEI | CTNAG | 5 cut(s) | 11, 32, 72, 561, 699 |
| BstF5I | GGATG | 2 cut(s) | 548, 655 |
| BstKTI | GATC | 3 cut(s) | 8, 531, 584 |
| BstMBI | GATC | 3 cut(s) | 5, 528, 581 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 68, 189 |
| BstNI | CCWGG | 2 cut(s) | 150, 303 |
| BstSCI | CCNGG | 2 cut(s) | 148, 301 |
| BstV2I | GAAGAC | 1 cut(s) | 124 |
| BstX2I | RGATCY | 2 cut(s) | 5, 528 |
| BstYI | RGATCY | 2 cut(s) | 5, 528 |
| BtsCI | GGATG | 2 cut(s) | 548, 655 |
| BtsI | GCAGTG | 1 cut(s) | 22 |
| BtsIMutI | CAGTG | 3 cut(s) | 22, 269, 351 |
| Cac8I | GCNNGC | 1 cut(s) | 53 |
| Cfr13I | GGNCC | 1 cut(s) | 299 |
| CviAII | CATG | 1 cut(s) | 334 |
| CviJI | RGCY | 6 cut(s) | 62, 76, 163, 307, 664, 698 |
| CviKI_1 | RGCY | 6 cut(s) | 62, 76, 163, 307, 664, 698 |
| DdeI | CTNAG | 5 cut(s) | 11, 32, 72, 561, 699 |
| DpnI | GATC | 3 cut(s) | 7, 530, 583 |
| DpnII | GATC | 3 cut(s) | 5, 528, 581 |
| Eam1104I | CTCTTC | 4 cut(s) | 69, 95, 173, 519 |
| EarI | CTCTTC | 4 cut(s) | 69, 95, 173, 519 |
| Eco47I | GGWCC | 1 cut(s) | 299 |
| Eco57I | CTGAAG | 1 cut(s) | 384 |
| Eco88I | CYCGRG | 1 cut(s) | 532 |
| EcoRII | CCWGG | 2 cut(s) | 148, 301 |
| FaeI | CATG | 1 cut(s) | 337 |
| FaiI | YATR | 5 cut(s) | 38, 335, 416, 431, 442 |
| FaqI | GGGAC | 1 cut(s) | 36 |
| FatI | CATG | 1 cut(s) | 333 |
| FblI | GTMKAC | 1 cut(s) | 107 |
| FokI | GGATG | 2 cut(s) | 535, 662 |
| FspBI | CTAG | 1 cut(s) | 575 |
| Hin1II | CATG | 1 cut(s) | 337 |
| HincII | GTYRAC | 1 cut(s) | 108 |
| HindII | GTYRAC | 1 cut(s) | 108 |
| HindIII | AAGCTT | 2 cut(s) | 662, 696 |
| HinfI | GANTC | 4 cut(s) | 359, 503, 545, 633 |
| HphI | GGTGA | 1 cut(s) | 600 |
| Hpy166II | GTNNAC | 3 cut(s) | 108, 327, 474 |
| Hpy188I | TCNGA | 3 cut(s) | 12, 364, 556 |
| Hpy188III | TCNNGA | 2 cut(s) | 532, 630 |
| Hpy8I | GTNNAC | 3 cut(s) | 108, 327, 474 |
| Hpy99I | CGWCG | 2 cut(s) | 112, 115 |
| HpyAV | CCTTC | 3 cut(s) | 210, 225, 474 |
| HpyCH4III | ACNGT | 3 cut(s) | 264, 346, 612 |
| HpyCH4V | TGCA | 3 cut(s) | 183, 653, 692 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 68, 189 |
| HpyF3I | CTNAG | 5 cut(s) | 11, 32, 72, 561, 699 |
| Hsp92II | CATG | 1 cut(s) | 337 |
| Kzo9I | GATC | 3 cut(s) | 5, 528, 581 |
| LguI | GCTCTTC | 1 cut(s) | 69 |
| LpnPI | CCDG | 6 cut(s) | 135, 135, 162, 169, 288, 315 |
| LweI | GCATC | 2 cut(s) | 547, 640 |
| MaeI | CTAG | 1 cut(s) | 575 |
| MalI | GATC | 3 cut(s) | 7, 530, 583 |
| MboI | GATC | 3 cut(s) | 5, 528, 581 |
| MflI | RGATCY | 2 cut(s) | 5, 528 |
| MlyI | GAGTC | 2 cut(s) | 512, 554 |
| MnlI | CCTC | 9 cut(s) | 96, 235, 279, 309, 447, 462, 489, 562, 649 |
| MseI | TTAA | 5 cut(s) | 273, 411, 485, 567, 644 |
| MslI | CAYNNNNRTG | 1 cut(s) | 332 |
| MspCI | CTTAAG | 1 cut(s) | 643 |
| MspR9I | CCNGG | 2 cut(s) | 150, 303 |
| MvaI | CCWGG | 2 cut(s) | 150, 303 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 68, 189 |
| NdeII | GATC | 3 cut(s) | 5, 528, 581 |
| NlaIII | CATG | 1 cut(s) | 337 |
| NlaIV | GGNNCC | 1 cut(s) | 154 |
| NmeAIII | GCCGAG | 1 cut(s) | 339 |
| NspV | TTCGAA | 1 cut(s) | 130 |
| PaeR7I | CTCGAG | 1 cut(s) | 532 |
| PciSI | GCTCTTC | 1 cut(s) | 69 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 626 |
| PfeI | GAWTC | 2 cut(s) | 359, 633 |
| PleI | GAGTC | 2 cut(s) | 511, 553 |
| PpsI | GAGTC | 2 cut(s) | 511, 553 |
| Psp6I | CCWGG | 2 cut(s) | 148, 301 |
| PspGI | CCWGG | 2 cut(s) | 148, 301 |
| PspN4I | GGNNCC | 1 cut(s) | 154 |
| PspPI | GGNCC | 1 cut(s) | 299 |
| PsuI | RGATCY | 2 cut(s) | 5, 528 |
| RseI | CAYNNNNRTG | 1 cut(s) | 332 |
| SalI | GTCGAC | 1 cut(s) | 106 |
| SapI | GCTCTTC | 1 cut(s) | 69 |
| SaqAI | TTAA | 5 cut(s) | 273, 411, 485, 567, 644 |
| Sau3AI | GATC | 3 cut(s) | 5, 528, 581 |
| Sau96I | GGNCC | 1 cut(s) | 299 |
| SchI | GAGTC | 2 cut(s) | 512, 554 |
| ScrFI | CCNGG | 2 cut(s) | 150, 303 |
| SetI | ASST | 8 cut(s) | 64, 78, 107, 124, 165, 320, 666, 700 |
| SfaNI | GCATC | 2 cut(s) | 547, 640 |
| Sfr274I | CTCGAG | 1 cut(s) | 532 |
| SfuI | TTCGAA | 1 cut(s) | 130 |
| SinI | GGWCC | 1 cut(s) | 299 |
| SlaI | CTCGAG | 1 cut(s) | 532 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 332 |
| SmlI | CTYRAG | 2 cut(s) | 532, 643 |
| SmoI | CTYRAG | 2 cut(s) | 532, 643 |
| SpeI | ACTAGT | 1 cut(s) | 574 |
| SspMI | CTAG | 1 cut(s) | 575 |
| StyD4I | CCNGG | 2 cut(s) | 148, 301 |
| TaaI | ACNGT | 3 cut(s) | 264, 346, 612 |
| TaqI | TCGA | 4 cut(s) | 107, 130, 533, 629 |
| TfiI | GAWTC | 2 cut(s) | 359, 633 |
| Tru1I | TTAA | 5 cut(s) | 273, 411, 485, 567, 644 |
| Tru9I | TTAA | 5 cut(s) | 273, 411, 485, 567, 644 |
| TscAI | CASTG | 3 cut(s) | 22, 269, 351 |
| TspDTI | ATGAA | 1 cut(s) | 160 |
| TspRI | CASTG | 3 cut(s) | 22, 269, 351 |
| Vha464I | CTTAAG | 1 cut(s) | 643 |
| VpaK11BI | GGWCC | 1 cut(s) | 299 |
| XhoI | CTCGAG | 1 cut(s) | 532 |
| XmiI | GTMKAC | 1 cut(s) | 107 |
| XspI | CTAG | 1 cut(s) | 575 |