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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39560 |
| fragaria_vesca | FvH4_7g22100 |
| prunus_persica | Prupe.2G233200_v2.0.a1 |
| pyrus_communis | pycom01g15200 pycom07g18430 |
| rosa_chinensis | RchiOBHm_Chr1g0366491 |
| rosa_laevigata | RLG00000027343 |
| rosa_multiflora | Rmu_sc0012047.1_g000001 Rmu_ssc0000192.1_g000002 Rmu_ssc0000250.1_g000020 |
| rosa_roxburghii | Rroxscaffold_4G00289880 Rroxscaffold_4G00290140 |
| rosa_rugosa | Rorug01G0330400 |
| rosa_samantha | Rh1AG338300 Rh1BG299800 Rh1CG314900 Rh1DG331600 Rh2AG519400 |
| rosa_wichuraiana | Rw1G029950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 187, 254 |
| AccI | GTMKAC | 1 cut(s) | 745 |
| AclWI | GGATC | 1 cut(s) | 844 |
| AcuI | CTGAAG | 3 cut(s) | 263, 456, 939 |
| AfaI | GTAC | 1 cut(s) | 933 |
| AfeI | AGCGCT | 1 cut(s) | 373 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 148 |
| AflIII | ACRYGT | 1 cut(s) | 162 |
| AgsI | TTSAA | 9 cut(s) | 125, 332, 626, 649, 682, 724, 770, 817, 918 |
| AleI | CACNNNNGTG | 1 cut(s) | 404 |
| Alw21I | GWGCWC | 1 cut(s) | 882 |
| Alw26I | GTCTC | 1 cut(s) | 512 |
| AlwI | GGATC | 1 cut(s) | 844 |
| Aor51HI | AGCGCT | 1 cut(s) | 373 |
| AoxI | GGCC | 1 cut(s) | 380 |
| ApeKI | GCWGC | 3 cut(s) | 138, 316, 364 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 511, 543 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 181 |
| AspLEI | GCGC | 1 cut(s) | 374 |
| AspS9I | GGNCC | 2 cut(s) | 380, 761 |
| AsuHPI | GGTGA | 5 cut(s) | 470, 657, 838, 878, 942 |
| AvaII | GGWCC | 1 cut(s) | 761 |
| BanII | GRGCYC | 2 cut(s) | 545, 882 |
| Bbv12I | GWGCWC | 1 cut(s) | 882 |
| BbvI | GCAGC | 3 cut(s) | 150, 303, 351 |
| BccI | CCATC | 5 cut(s) | 151, 434, 752, 827, 897 |
| BcoDI | GTCTC | 1 cut(s) | 512 |
| BfaI | CTAG | 2 cut(s) | 789, 941 |
| BfmI | CTRYAG | 3 cut(s) | 133, 365, 746 |
| BfoI | RGCGCY | 1 cut(s) | 375 |
| BisI | GCNGC | 3 cut(s) | 139, 317, 365 |
| BlpI | GCTNAGC | 1 cut(s) | 72 |
| BlsI | GCNGC | 3 cut(s) | 140, 318, 366 |
| Bme18I | GGWCC | 1 cut(s) | 761 |
| BmgT120I | GGNCC | 2 cut(s) | 380, 761 |
| BmsI | GCATC | 2 cut(s) | 337, 628 |
| BpmI | CTGGAG | 1 cut(s) | 193 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 72 |
| BsaBI | GATNNNNATC | 1 cut(s) | 825 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 148 |
| Bse8I | GATNNNNATC | 1 cut(s) | 825 |
| BseGI | GGATG | 1 cut(s) | 352 |
| BseJI | GATNNNNATC | 1 cut(s) | 825 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BseMII | CTCAG | 3 cut(s) | 63, 287, 726 |
| BseRI | GAGGAG | 4 cut(s) | 555, 606, 660, 716 |
| BseXI | GCAGC | 3 cut(s) | 150, 303, 351 |
| BshFI | GGCC | 1 cut(s) | 382 |
| BsiHKAI | GWGCWC | 1 cut(s) | 882 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 148 |
| BsmAI | GTCTC | 1 cut(s) | 512 |
| BsmI | GAATGC | 1 cut(s) | 959 |
| BsnI | GGCC | 1 cut(s) | 382 |
| Bsp1286I | GDGCHC | 2 cut(s) | 545, 882 |
| Bsp143I | GATC | 3 cut(s) | 826, 836, 965 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 72 |
| BspANI | GGCC | 1 cut(s) | 382 |
| BspCNI | CTCAG | 3 cut(s) | 64, 286, 727 |
| BspMAI | CTGCAG | 1 cut(s) | 369 |
| BspPI | GGATC | 1 cut(s) | 844 |
| BssMI | GATC | 3 cut(s) | 826, 836, 965 |
| Bst4CI | ACNGT | 1 cut(s) | 514 |
| Bst6I | CTCTTC | 2 cut(s) | 95, 401 |
| BstC8I | GCNNGC | 1 cut(s) | 301 |
| BstDEI | CTNAG | 6 cut(s) | 72, 186, 273, 450, 710, 735 |
| BstF5I | GGATG | 1 cut(s) | 352 |
| BstH2I | RGCGCY | 1 cut(s) | 375 |
| BstHHI | GCGC | 1 cut(s) | 374 |
| BstKTI | GATC | 3 cut(s) | 829, 839, 968 |
| BstMAI | GTCTC | 1 cut(s) | 512 |
| BstMBI | GATC | 3 cut(s) | 826, 836, 965 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 68, 289, 361, 794 |
| BstNSI | RCATGY | 1 cut(s) | 166 |
| BstSFI | CTRYAG | 3 cut(s) | 133, 365, 746 |
| BstV1I | GCAGC | 3 cut(s) | 150, 303, 351 |
| BsuRI | GGCC | 1 cut(s) | 382 |
| BtsCI | GGATG | 1 cut(s) | 352 |
| BtsIMutI | CAGTG | 1 cut(s) | 519 |
| Cac8I | GCNNGC | 1 cut(s) | 301 |
| CfoI | GCGC | 1 cut(s) | 374 |
| Cfr13I | GGNCC | 2 cut(s) | 380, 761 |
| Csp6I | GTAC | 1 cut(s) | 932 |
| CviAII | CATG | 4 cut(s) | 163, 202, 260, 596 |
| CviQI | GTAC | 1 cut(s) | 932 |
| DdeI | CTNAG | 6 cut(s) | 72, 186, 273, 450, 710, 735 |
| DpnI | GATC | 3 cut(s) | 828, 838, 967 |
| DpnII | GATC | 3 cut(s) | 826, 836, 965 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 187, 254 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 187, 254 |
| Eam1104I | CTCTTC | 2 cut(s) | 95, 401 |
| EarI | CTCTTC | 2 cut(s) | 95, 401 |
| Ecl136II | GAGCTC | 1 cut(s) | 880 |
| Eco24I | GRGCYC | 2 cut(s) | 545, 882 |
| Eco47I | GGWCC | 1 cut(s) | 761 |
| Eco47III | AGCGCT | 1 cut(s) | 373 |
| Eco53kI | GAGCTC | 1 cut(s) | 880 |
| Eco57I | CTGAAG | 3 cut(s) | 263, 456, 939 |
| EcoICRI | GAGCTC | 1 cut(s) | 880 |
| EcoT38I | GRGCYC | 2 cut(s) | 545, 882 |
| FaeI | CATG | 4 cut(s) | 166, 205, 263, 599 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 410, 442 |
| FatI | CATG | 4 cut(s) | 162, 201, 259, 595 |
| FauNDI | CATATG | 1 cut(s) | 288 |
| FblI | GTMKAC | 1 cut(s) | 745 |
| Fnu4HI | GCNGC | 3 cut(s) | 139, 317, 365 |
| FokI | GGATG | 1 cut(s) | 359 |
| FriOI | GRGCYC | 2 cut(s) | 545, 882 |
| Fsp4HI | GCNGC | 3 cut(s) | 139, 317, 365 |
| FspBI | CTAG | 2 cut(s) | 789, 941 |
| GlaI | GCGC | 1 cut(s) | 373 |
| GluI | GCNGC | 3 cut(s) | 139, 317, 365 |
| GsuI | CTGGAG | 1 cut(s) | 193 |
| HaeII | RGCGCY | 1 cut(s) | 375 |
| HaeIII | GGCC | 1 cut(s) | 382 |
| HhaI | GCGC | 1 cut(s) | 374 |
| Hin1II | CATG | 4 cut(s) | 166, 205, 263, 599 |
| Hin6I | GCGC | 1 cut(s) | 372 |
| HinP1I | GCGC | 1 cut(s) | 372 |
| HincII | GTYRAC | 2 cut(s) | 859, 976 |
| HindII | GTYRAC | 2 cut(s) | 859, 976 |
| HinfI | GANTC | 7 cut(s) | 240, 431, 466, 532, 581, 600, 626 |
| HphI | GGTGA | 5 cut(s) | 470, 657, 838, 878, 942 |
| Hpy166II | GTNNAC | 3 cut(s) | 746, 859, 976 |
| Hpy188I | TCNGA | 3 cut(s) | 239, 436, 965 |
| Hpy188III | TCNNGA | 2 cut(s) | 480, 830 |
| Hpy8I | GTNNAC | 3 cut(s) | 746, 859, 976 |
| HpyAV | CCTTC | 4 cut(s) | 171, 718, 733, 963 |
| HpyCH4III | ACNGT | 1 cut(s) | 514 |
| HpyCH4V | TGCA | 5 cut(s) | 292, 350, 367, 641, 691 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 68, 289, 361, 794 |
| HpyF3I | CTNAG | 6 cut(s) | 72, 186, 273, 450, 710, 735 |
| Hsp92II | CATG | 4 cut(s) | 166, 205, 263, 599 |
| HspAI | GCGC | 1 cut(s) | 372 |
| Kzo9I | GATC | 3 cut(s) | 826, 836, 965 |
| LmnI | GCTCC | 2 cut(s) | 802, 877 |
| LpnPI | CCDG | 5 cut(s) | 157, 329, 677, 777, 914 |
| Lsp1109I | GCAGC | 3 cut(s) | 150, 303, 351 |
| LweI | GCATC | 2 cut(s) | 337, 628 |
| MaeI | CTAG | 2 cut(s) | 789, 941 |
| MaeIII | GTNAC | 1 cut(s) | 587 |
| MalI | GATC | 3 cut(s) | 828, 838, 967 |
| MboI | GATC | 3 cut(s) | 826, 836, 965 |
| MfeI | CAATTG | 1 cut(s) | 402 |
| MhlI | GDGCHC | 2 cut(s) | 545, 882 |
| MluCI | AATT | 4 cut(s) | 66, 402, 719, 913 |
| MlyI | GAGTC | 3 cut(s) | 475, 526, 575 |
| MmeI | TCCRAC | 1 cut(s) | 572 |
| MroXI | GAANNNNTTC | 1 cut(s) | 181 |
| MslI | CAYNNNNRTG | 1 cut(s) | 404 |
| MunI | CAATTG | 1 cut(s) | 402 |
| Mva1269I | GAATGC | 1 cut(s) | 959 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 68, 289, 361, 794 |
| NdeI | CATATG | 1 cut(s) | 288 |
| NdeII | GATC | 3 cut(s) | 826, 836, 965 |
| NlaIII | CATG | 4 cut(s) | 166, 205, 263, 599 |
| NspI | RCATGY | 1 cut(s) | 166 |
| OliI | CACNNNNGTG | 1 cut(s) | 404 |
| PciI | ACATGT | 1 cut(s) | 162 |
| PctI | GAATGC | 1 cut(s) | 959 |
| PdmI | GAANNNNTTC | 1 cut(s) | 181 |
| PfeI | GAWTC | 4 cut(s) | 240, 431, 600, 626 |
| PkrI | GCNGC | 3 cut(s) | 140, 318, 366 |
| PleI | GAGTC | 3 cut(s) | 474, 526, 575 |
| PpsI | GAGTC | 3 cut(s) | 474, 526, 575 |
| PscI | ACATGT | 1 cut(s) | 162 |
| Psp124BI | GAGCTC | 1 cut(s) | 882 |
| PspPI | GGNCC | 2 cut(s) | 380, 761 |
| PstI | CTGCAG | 1 cut(s) | 369 |
| RsaI | GTAC | 1 cut(s) | 933 |
| RsaNI | GTAC | 1 cut(s) | 932 |
| RseI | CAYNNNNRTG | 1 cut(s) | 404 |
| SacI | GAGCTC | 1 cut(s) | 882 |
| SatI | GCNGC | 3 cut(s) | 139, 317, 365 |
| Sau3AI | GATC | 3 cut(s) | 826, 836, 965 |
| Sau96I | GGNCC | 2 cut(s) | 380, 761 |
| SchI | GAGTC | 3 cut(s) | 475, 526, 575 |
| SduI | GDGCHC | 2 cut(s) | 545, 882 |
| SfaNI | GCATC | 2 cut(s) | 337, 628 |
| SfcI | CTRYAG | 3 cut(s) | 133, 365, 746 |
| SinI | GGWCC | 1 cut(s) | 761 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 404 |
| Sse9I | AATT | 4 cut(s) | 66, 402, 719, 913 |
| SspMI | CTAG | 2 cut(s) | 789, 941 |
| SstI | GAGCTC | 1 cut(s) | 882 |
| TaaI | ACNGT | 1 cut(s) | 514 |
| TasI | AATT | 4 cut(s) | 66, 402, 719, 913 |
| TfiI | GAWTC | 4 cut(s) | 240, 431, 600, 626 |
| TscAI | CASTG | 1 cut(s) | 519 |
| TseI | GCWGC | 3 cut(s) | 138, 316, 364 |
| TspDTI | ATGAA | 6 cut(s) | 17, 222, 275, 276, 837, 884 |
| TspRI | CASTG | 1 cut(s) | 519 |
| VpaK11BI | GGWCC | 1 cut(s) | 761 |
| XceI | RCATGY | 1 cut(s) | 166 |
| XmiI | GTMKAC | 1 cut(s) | 745 |
| XmnI | GAANNNNTTC | 1 cut(s) | 181 |
| XspI | CTAG | 2 cut(s) | 789, 941 |