initiator tRNA phosphoribosyl transferase family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40570 AT2G40570 AT2G40570 |
| fragaria_vesca | FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 |
| malus_domestica | MD02G1065300.v1.1 MD15G1196200.v1.1 |
| prunus_persica | Prupe.7G220200_v2.0.a1 Prupe.7G220200_v2.0.a1 Prupe.7G220200_v2.0.a1 |
| pyrus_communis | pycom02g05140 |
| rosa_chinensis | RchiOBHm_Chr2g0091831 |
| rosa_laevigata | RLG00000016255 |
| rosa_multiflora | Rmu_sc0021402.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00149700 |
| rosa_rugosa | Rorug02G0021400 |
| rosa_samantha | Rh2AG066000 Rh2BG065500 Rh2CG066900 Rh2DG065100 |
| rosa_wichuraiana | Rw2G005460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 440 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 806 |
| AccII | CGCG | 3 cut(s) | 1274, 1484, 1548 |
| AccIII | TCCGGA | 1 cut(s) | 358 |
| AciI | CCGC | 4 cut(s) | 1272, 1274, 1484, 1546 |
| AcoI | YGGCCR | 1 cut(s) | 1365 |
| AcsI | RAATTY | 2 cut(s) | 1235, 1552 |
| AcyI | GRCGYC | 1 cut(s) | 213 |
| AfaI | GTAC | 2 cut(s) | 197, 693 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 806, 1226, 1505 |
| AflIII | ACRYGT | 1 cut(s) | 862 |
| AhlI | ACTAGT | 2 cut(s) | 458, 770 |
| AjnI | CCWGG | 1 cut(s) | 799 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1301, 1333 |
| AluBI | AGCT | 9 cut(s) | 56, 563, 605, 614, 623, 740, 965, 1127, 1291 |
| AluI | AGCT | 9 cut(s) | 56, 563, 605, 614, 623, 740, 965, 1127, 1291 |
| Alw21I | GWGCWC | 1 cut(s) | 1048 |
| Alw26I | GTCTC | 7 cut(s) | 72, 92, 194, 281, 739, 1130, 1545 |
| Alw44I | GTGCAC | 1 cut(s) | 1044 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 743, 806, 890, 1187 |
| Aor13HI | TCCGGA | 1 cut(s) | 358 |
| AoxI | GGCC | 4 cut(s) | 152, 887, 1365, 1398 |
| ApaLI | GTGCAC | 1 cut(s) | 1044 |
| ApeKI | GCWGC | 1 cut(s) | 56 |
| ApoI | RAATTY | 2 cut(s) | 1235, 1552 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 110, 142 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 772 |
| AspLEI | GCGC | 1 cut(s) | 949 |
| AspS9I | GGNCC | 2 cut(s) | 887, 1398 |
| AsuHPI | GGTGA | 5 cut(s) | 485, 764, 821, 1498, 1535 |
| AxyI | CCTNAGG | 1 cut(s) | 969 |
| BaeGI | GKGCMC | 1 cut(s) | 1048 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 371, 404 |
| BalI | TGGCCA | 1 cut(s) | 1367 |
| BauI | CACGAG | 1 cut(s) | 134 |
| Bbv12I | GWGCWC | 1 cut(s) | 1048 |
| BbvI | GCAGC | 1 cut(s) | 43 |
| BccI | CCATC | 8 cut(s) | 131, 233, 294, 464, 1328, 1376, 1400, 1507 |
| BciT130I | CCWGG | 1 cut(s) | 801 |
| BclI | TGATCA | 1 cut(s) | 1165 |
| BcoDI | GTCTC | 7 cut(s) | 72, 92, 194, 281, 739, 1130, 1545 |
| BcuI | ACTAGT | 2 cut(s) | 458, 770 |
| BfaI | CTAG | 6 cut(s) | 459, 564, 620, 771, 831, 1503 |
| BfuAI | ACCTGC | 1 cut(s) | 440 |
| BglII | AGATCT | 1 cut(s) | 138 |
| BisI | GCNGC | 1 cut(s) | 57 |
| BlpI | GCTNAGC | 1 cut(s) | 1287 |
| BlsI | GCNGC | 1 cut(s) | 58 |
| Bme1390I | CCNGG | 1 cut(s) | 801 |
| BmgT120I | GGNCC | 2 cut(s) | 887, 1398 |
| BmiI | GGNNCC | 1 cut(s) | 1399 |
| BmrFI | CCNGG | 1 cut(s) | 801 |
| BmsI | GCATC | 6 cut(s) | 308, 330, 436, 1124, 1222, 1449 |
| BoxI | GACNNNNGTC | 1 cut(s) | 84 |
| BpmI | CTGGAG | 1 cut(s) | 324 |
| Bpu10I | CCTNAGC | 1 cut(s) | 696 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1287 |
| BpuEI | CTTGAG | 1 cut(s) | 1277 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1170 |
| BsaHI | GRCGYC | 1 cut(s) | 213 |
| BsaI | GGTCTC | 1 cut(s) | 194 |
| BsaJI | CCNNGG | 2 cut(s) | 800, 1272 |
| BsaWI | WCCGGW | 1 cut(s) | 358 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 806, 1226, 1505 |
| Bse21I | CCTNAGG | 1 cut(s) | 969 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1170 |
| BseAI | TCCGGA | 1 cut(s) | 358 |
| BseBI | CCWGG | 1 cut(s) | 801 |
| BseDI | CCNNGG | 2 cut(s) | 800, 1272 |
| BseGI | GGATG | 3 cut(s) | 323, 577, 1464 |
| BseJI | GATNNNNATC | 1 cut(s) | 1170 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 806, 1226, 1505 |
| BseMII | CTCAG | 6 cut(s) | 534, 687, 750, 897, 983, 1194 |
| BseRI | GAGGAG | 1 cut(s) | 957 |
| BseSI | GKGCMC | 1 cut(s) | 1048 |
| BseXI | GCAGC | 1 cut(s) | 43 |
| Bsh1236I | CGCG | 3 cut(s) | 1274, 1484, 1548 |
| BshFI | GGCC | 4 cut(s) | 154, 889, 1367, 1400 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1048 |
| BsiSI | CCGG | 1 cut(s) | 359 |
| BslFI | GGGAC | 1 cut(s) | 1169 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 806, 1226, 1505 |
| BsmAI | GTCTC | 7 cut(s) | 72, 92, 194, 281, 739, 1130, 1545 |
| BsmBI | CGTCTC | 2 cut(s) | 281, 1545 |
| BsmFI | GGGAC | 1 cut(s) | 1169 |
| BsmI | GAATGC | 1 cut(s) | 1495 |
| BsnI | GGCC | 4 cut(s) | 154, 889, 1367, 1400 |
| Bso31I | GGTCTC | 1 cut(s) | 194 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1048 |
| Bsp13I | TCCGGA | 1 cut(s) | 358 |
| Bsp143I | GATC | 3 cut(s) | 104, 138, 1165 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1287 |
| BspACI | CCGC | 4 cut(s) | 1272, 1274, 1484, 1546 |
| BspANI | GGCC | 4 cut(s) | 154, 889, 1367, 1400 |
| BspCNI | CTCAG | 6 cut(s) | 535, 688, 749, 896, 982, 1193 |
| BspEI | TCCGGA | 1 cut(s) | 358 |
| BspFNI | CGCG | 3 cut(s) | 1274, 1484, 1548 |
| BspLI | GGNNCC | 1 cut(s) | 1399 |
| BspMI | ACCTGC | 1 cut(s) | 440 |
| BspQI | GCTCTTC | 3 cut(s) | 12, 105, 1197 |
| BspTNI | GGTCTC | 1 cut(s) | 194 |
| BssECI | CCNNGG | 2 cut(s) | 800, 1272 |
| BssMI | GATC | 3 cut(s) | 104, 138, 1165 |
| BssNI | GRCGYC | 1 cut(s) | 213 |
| BssSI | CACGAG | 1 cut(s) | 134 |
| Bst2BI | CACGAG | 1 cut(s) | 134 |
| Bst2UI | CCWGG | 1 cut(s) | 801 |
| Bst4CI | ACNGT | 3 cut(s) | 86, 407, 673 |
| Bst6I | CTCTTC | 7 cut(s) | 12, 105, 300, 813, 1197, 1419, 1424 |
| BstACI | GRCGYC | 1 cut(s) | 213 |
| BstDEI | CTNAG | 9 cut(s) | 543, 696, 736, 883, 969, 1017, 1040, 1180, 1287 |
| BstDSI | CCRYGG | 1 cut(s) | 1272 |
| BstF5I | GGATG | 3 cut(s) | 323, 577, 1464 |
| BstFNI | CGCG | 3 cut(s) | 1274, 1484, 1548 |
| BstHHI | GCGC | 1 cut(s) | 949 |
| BstKTI | GATC | 3 cut(s) | 107, 141, 1168 |
| BstMAI | GTCTC | 7 cut(s) | 72, 92, 194, 281, 739, 1130, 1545 |
| BstMBI | GATC | 3 cut(s) | 104, 138, 1165 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 611, 620, 1112, 1459, 1490 |
| BstNI | CCWGG | 1 cut(s) | 801 |
| BstNSI | RCATGY | 2 cut(s) | 370, 866 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 84 |
| BstSCI | CCNGG | 1 cut(s) | 799 |
| BstSLI | GKGCMC | 1 cut(s) | 1048 |
| BstUI | CGCG | 3 cut(s) | 1274, 1484, 1548 |
| BstV1I | GCAGC | 1 cut(s) | 43 |
| BstX2I | RGATCY | 1 cut(s) | 138 |
| BstYI | RGATCY | 1 cut(s) | 138 |
| Bsu36I | CCTNAGG | 1 cut(s) | 969 |
| BsuRI | GGCC | 4 cut(s) | 154, 889, 1367, 1400 |
| BtgI | CCRYGG | 1 cut(s) | 1272 |
| BtsCI | GGATG | 3 cut(s) | 323, 577, 1464 |
| BveI | ACCTGC | 1 cut(s) | 440 |
| CaiI | CAGNNNCTG | 4 cut(s) | 743, 806, 890, 1187 |
| CfoI | GCGC | 1 cut(s) | 949 |
| Cfr13I | GGNCC | 2 cut(s) | 887, 1398 |
| Cfr42I | CCGCGG | 1 cut(s) | 1275 |
| CseI | GACGC | 2 cut(s) | 221, 635 |
| Csp6I | GTAC | 2 cut(s) | 196, 692 |
| CviAII | CATG | 6 cut(s) | 367, 627, 701, 708, 863, 1222 |
| CviQI | GTAC | 2 cut(s) | 196, 692 |
| DdeI | CTNAG | 9 cut(s) | 543, 696, 736, 883, 969, 1017, 1040, 1180, 1287 |
| DpnI | GATC | 3 cut(s) | 106, 140, 1167 |
| DpnII | GATC | 3 cut(s) | 104, 138, 1165 |
| EaeI | YGGCCR | 1 cut(s) | 1365 |
| Eam1104I | CTCTTC | 7 cut(s) | 12, 105, 300, 813, 1197, 1419, 1424 |
| EarI | CTCTTC | 7 cut(s) | 12, 105, 300, 813, 1197, 1419, 1424 |
| Eco31I | GGTCTC | 1 cut(s) | 194 |
| Eco32I | GATATC | 1 cut(s) | 1345 |
| Eco81I | CCTNAGG | 1 cut(s) | 969 |
| EcoO109I | RGGNCCY | 2 cut(s) | 887, 1398 |
| EcoRII | CCWGG | 1 cut(s) | 799 |
| EcoRV | GATATC | 1 cut(s) | 1345 |
| EcoT22I | ATGCAT | 1 cut(s) | 323 |
| Esp3I | CGTCTC | 2 cut(s) | 281, 1545 |
| FaeI | CATG | 6 cut(s) | 370, 630, 704, 711, 866, 1225 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1301, 1333 |
| FaqI | GGGAC | 1 cut(s) | 1169 |
| FatI | CATG | 6 cut(s) | 366, 626, 700, 707, 862, 1221 |
| FauI | CCCGC | 1 cut(s) | 1279 |
| FbaI | TGATCA | 1 cut(s) | 1165 |
| Fnu4HI | GCNGC | 1 cut(s) | 57 |
| FokI | GGATG | 3 cut(s) | 330, 584, 1471 |
| Fsp4HI | GCNGC | 1 cut(s) | 57 |
| FspBI | CTAG | 6 cut(s) | 459, 564, 620, 771, 831, 1503 |
| GlaI | GCGC | 1 cut(s) | 948 |
| GluI | GCNGC | 1 cut(s) | 57 |
| GsuI | CTGGAG | 1 cut(s) | 324 |
| HaeIII | GGCC | 4 cut(s) | 154, 889, 1367, 1400 |
| HapII | CCGG | 1 cut(s) | 359 |
| HgaI | GACGC | 2 cut(s) | 221, 635 |
| HhaI | GCGC | 1 cut(s) | 949 |
| Hin1I | GRCGYC | 1 cut(s) | 213 |
| Hin1II | CATG | 6 cut(s) | 370, 630, 704, 711, 866, 1225 |
| Hin6I | GCGC | 1 cut(s) | 947 |
| HinP1I | GCGC | 1 cut(s) | 947 |
| HinfI | GANTC | 6 cut(s) | 119, 332, 704, 877, 1005, 1099 |
| HpaII | CCGG | 1 cut(s) | 359 |
| HphI | GGTGA | 5 cut(s) | 485, 764, 821, 1498, 1535 |
| Hpy166II | GTNNAC | 5 cut(s) | 133, 403, 579, 755, 1046 |
| Hpy188I | TCNGA | 4 cut(s) | 16, 202, 778, 1558 |
| Hpy188III | TCNNGA | 9 cut(s) | 359, 484, 959, 1199, 1257, 1294, 1331, 1372, 1503 |
| Hpy8I | GTNNAC | 5 cut(s) | 133, 403, 579, 755, 1046 |
| Hpy99I | CGWCG | 3 cut(s) | 78, 215, 1458 |
| HpyAV | CCTTC | 3 cut(s) | 188, 1219, 1388 |
| HpyCH4III | ACNGT | 3 cut(s) | 86, 407, 673 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 611, 620, 1112, 1459, 1490 |
| HpyF3I | CTNAG | 9 cut(s) | 543, 696, 736, 883, 969, 1017, 1040, 1180, 1287 |
| Hsp92I | GRCGYC | 1 cut(s) | 213 |
| Hsp92II | CATG | 6 cut(s) | 370, 630, 704, 711, 866, 1225 |
| HspAI | GCGC | 1 cut(s) | 947 |
| Kpn2I | TCCGGA | 1 cut(s) | 358 |
| Ksp22I | TGATCA | 1 cut(s) | 1165 |
| KspI | CCGCGG | 1 cut(s) | 1275 |
| Kzo9I | GATC | 3 cut(s) | 104, 138, 1165 |
| LguI | GCTCTTC | 3 cut(s) | 12, 105, 1197 |
| LmnI | GCTCC | 2 cut(s) | 602, 970 |
| Lsp1109I | GCAGC | 1 cut(s) | 43 |
| LweI | GCATC | 6 cut(s) | 308, 330, 436, 1124, 1222, 1449 |
| MaeI | CTAG | 6 cut(s) | 459, 564, 620, 771, 831, 1503 |
| MaeIII | GTNAC | 3 cut(s) | 437, 513, 899 |
| MalI | GATC | 3 cut(s) | 106, 140, 1167 |
| MboI | GATC | 3 cut(s) | 104, 138, 1165 |
| MfeI | CAATTG | 1 cut(s) | 1143 |
| MflI | RGATCY | 1 cut(s) | 138 |
| MhlI | GDGCHC | 1 cut(s) | 1048 |
| MlsI | TGGCCA | 1 cut(s) | 1367 |
| MluCI | AATT | 8 cut(s) | 253, 488, 790, 1143, 1159, 1235, 1279, 1552 |
| MluNI | TGGCCA | 1 cut(s) | 1367 |
| MlyI | GAGTC | 2 cut(s) | 113, 1014 |
| MmeI | TCCRAC | 1 cut(s) | 767 |
| Mox20I | TGGCCA | 1 cut(s) | 1367 |
| Mph1103I | ATGCAT | 1 cut(s) | 323 |
| MroI | TCCGGA | 1 cut(s) | 358 |
| MroXI | GAANNNNTTC | 1 cut(s) | 772 |
| MscI | TGGCCA | 1 cut(s) | 1367 |
| MseI | TTAA | 4 cut(s) | 264, 417, 1157, 1278 |
| MslI | CAYNNNNRTG | 2 cut(s) | 867, 1373 |
| Msp20I | TGGCCA | 1 cut(s) | 1367 |
| MspA1I | CMGCKG | 1 cut(s) | 1274 |
| MspI | CCGG | 1 cut(s) | 359 |
| MspR9I | CCNGG | 1 cut(s) | 801 |
| MunI | CAATTG | 1 cut(s) | 1143 |
| Mva1269I | GAATGC | 1 cut(s) | 1495 |
| MvaI | CCWGG | 1 cut(s) | 801 |
| MvnI | CGCG | 3 cut(s) | 1274, 1484, 1548 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 611, 620, 1112, 1459, 1490 |
| NdeII | GATC | 3 cut(s) | 104, 138, 1165 |
| NlaIII | CATG | 6 cut(s) | 370, 630, 704, 711, 866, 1225 |
| NlaIV | GGNNCC | 1 cut(s) | 1399 |
| NsiI | ATGCAT | 1 cut(s) | 323 |
| NspI | RCATGY | 2 cut(s) | 370, 866 |
| PciI | ACATGT | 1 cut(s) | 862 |
| PciSI | GCTCTTC | 3 cut(s) | 12, 105, 1197 |
| PctI | GAATGC | 1 cut(s) | 1495 |
| PdmI | GAANNNNTTC | 1 cut(s) | 772 |
| PfeI | GAWTC | 4 cut(s) | 332, 704, 877, 1099 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 806 |
| PkrI | GCNGC | 1 cut(s) | 58 |
| PleI | GAGTC | 2 cut(s) | 113, 1013 |
| PpsI | GAGTC | 2 cut(s) | 113, 1013 |
| PscI | ACATGT | 1 cut(s) | 862 |
| PshAI | GACNNNNGTC | 1 cut(s) | 84 |
| Psp6I | CCWGG | 1 cut(s) | 799 |
| PspGI | CCWGG | 1 cut(s) | 799 |
| PspN4I | GGNNCC | 1 cut(s) | 1399 |
| PspPI | GGNCC | 2 cut(s) | 887, 1398 |
| PstNI | CAGNNNCTG | 4 cut(s) | 743, 806, 890, 1187 |
| PsuI | RGATCY | 1 cut(s) | 138 |
| RsaI | GTAC | 2 cut(s) | 197, 693 |
| RsaNI | GTAC | 2 cut(s) | 196, 692 |
| RseI | CAYNNNNRTG | 2 cut(s) | 867, 1373 |
| SacII | CCGCGG | 1 cut(s) | 1275 |
| SapI | GCTCTTC | 3 cut(s) | 12, 105, 1197 |
| SaqAI | TTAA | 4 cut(s) | 264, 417, 1157, 1278 |
| SatI | GCNGC | 1 cut(s) | 57 |
| Sau3AI | GATC | 3 cut(s) | 104, 138, 1165 |
| Sau96I | GGNCC | 2 cut(s) | 887, 1398 |
| SchI | GAGTC | 2 cut(s) | 113, 1014 |
| ScrFI | CCNGG | 1 cut(s) | 801 |
| SduI | GDGCHC | 1 cut(s) | 1048 |
| SfaNI | GCATC | 6 cut(s) | 308, 330, 436, 1124, 1222, 1449 |
| Sfr303I | CCGCGG | 1 cut(s) | 1275 |
| SgrBI | CCGCGG | 1 cut(s) | 1275 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 867, 1373 |
| SmlI | CTYRAG | 1 cut(s) | 1292 |
| SmoI | CTYRAG | 1 cut(s) | 1292 |
| SpeI | ACTAGT | 2 cut(s) | 458, 770 |
| Sse9I | AATT | 8 cut(s) | 253, 488, 790, 1143, 1159, 1235, 1279, 1552 |
| SsiI | CCGC | 4 cut(s) | 1272, 1274, 1484, 1546 |
| SspI | AATATT | 2 cut(s) | 414, 1467 |
| SspMI | CTAG | 6 cut(s) | 459, 564, 620, 771, 831, 1503 |
| StyD4I | CCNGG | 1 cut(s) | 799 |
| TaaI | ACNGT | 3 cut(s) | 86, 407, 673 |
| TaqI | TCGA | 5 cut(s) | 103, 210, 371, 943, 1495 |
| TasI | AATT | 8 cut(s) | 253, 488, 790, 1143, 1159, 1235, 1279, 1552 |
| TfiI | GAWTC | 4 cut(s) | 332, 704, 877, 1099 |
| Tru1I | TTAA | 4 cut(s) | 264, 417, 1157, 1278 |
| Tru9I | TTAA | 4 cut(s) | 264, 417, 1157, 1278 |
| TseI | GCWGC | 1 cut(s) | 56 |
| TspDTI | ATGAA | 8 cut(s) | 615, 696, 702, 831, 1041, 1080, 1238, 1404 |
| TspGWI | ACGGA | 1 cut(s) | 1471 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 806 |
| VneI | GTGCAC | 1 cut(s) | 1044 |
| XapI | RAATTY | 2 cut(s) | 1235, 1552 |
| XbaI | TCTAGA | 1 cut(s) | 1502 |
| XceI | RCATGY | 2 cut(s) | 370, 866 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 852 |
| XmnI | GAANNNNTTC | 1 cut(s) | 772 |
| XspI | CTAG | 6 cut(s) | 459, 564, 620, 771, 831, 1503 |
| Zsp2I | ATGCAT | 1 cut(s) | 323 |