Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0003887

Physical Location & Seq

Genomic Coordinates Forward (+)

5152868 .. 5155731

Gene Structure 2864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G005460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGAAGACGACGAGGATACGCGTCAGCTGAGCATATACAGAGCCGCCAGAACCATAAAGCGCAGGGACAACACCCTCTACAACGCCCTCAGATCCATCTACGACGACTCTGTCTTCGTCGGCGAGATCTTCCAGCTCTGGCCCGACCTCCCTCTCCTCGCCAACCTTCGATGTGGCCTCTGGTACTCCCGAACGTTCCACGCCACGTGTTACTTCAAGTCCACCGACGGCCACAACAACAACTGGTCCTTCAACACGTCCCGGCTCAACCTCCACGTCGCTCAGCTCGCAGGACAGAAGGGCGGGTGTTTTATTGTGGATGCAACTAGGAGAGGGAAGCGGTTTCCGGACAGCATGTCGAAGACGATTCCGATTTGGACTTGCGTTTTGAACCGTTCGATTCAAAACCATCGAGAAAGAATGCGGCATAGTGCTCTGTCAAGTACTTGTGATGAATATTATGGAGATGCAAGACAGATGCCTATTGATTGGGATTGTTCCTTGCATCTTCCGCTTTGGGTGTCTGGAACAGAGAGAGCTTCTATCGAGAAGCGATTGGAAGAATGGACTCAACAGTTGGATGCAAGTGGAGCTGATATTAGCTCTCTTGCTTCTTGTTTAAAAAAGCCTTTACGCCCTCTATGGATATCACAGAAAACTGTCATTTGGTTGAATGAAGTTCCAGATCATGAGTCCTGGGATTTCACACCTATCATTCTTGTTTCTGCCTCATCCCCGAGCGGTGTTGTGCAACACAGGATTAGTTCAGAATTTAGCTGGAATTATATACCAGGAGCTGGTGATGATGAAGAAAGTTGGGCGAGGGGTTTAACACCTATTCTTTTCTGGAATTGTGCCTATGATATTATAAATGCAGGTCCTGAAATGTGTAATCAGATGGTGGCTGATATAGTTGAGAAGGATAGAGTGTATCGTGCTCGAAGGGGACAGGATGCTCCTCAGGTCACTGTTAAAGCTCCAAATCTGTTACCAAGCTCGGATCATCGGTTGAGGGACAATGATGAGTCACAATTAGCTGTGGATCTTGCAAACTTTAATATCGATCGTAATTCTTCTGATGAAGATTGTGTTATATCTTGGCTTGGTTTGACTAACCTTGCTGTAGGCACATCTCAGAACGCCGGAGTATCTAAAGTTGACTGCATATTAAATTGTGATAAGGAGTCTATCTCTGCTGATCCTAACGCATATTTACATCTTCATATGGTGACATCAAAGTTTGATCGCTTCTCCTTGTTAAATAATCTCCCTTCTGCAGTAAACTTTGCAAAGTTGAACCTCAGCCAAGGGAAGACACTTCTAATTTGTTGCGATAATGGGGAAGATATCAGTGTATGCATCTGTCTGGCAATCTTGACAGCACTATTTGATGAAGAAGGAACCTTCGATGGTGGAAACTTCTTCAGTGACACATGCATTACCAAGTTAGAAATGCGGAGAAGACTCATTACTATCTGCAAATATGTAGTAAATGCCAGGCCATCAAGAGGGAATCTGAAGCAGGTTTTTAACTTTCTTAGTAGTGGAAGAGCTGGTTTGACAAACATGCCTACGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006464 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016757 GO:0016763 GO:0019538 GO:0019988 GO:0034470 GO:0034641 GO:0034660 GO:0036211 GO:0043170 GO:0043399 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Init_tRNA_PT Rit1_C

Protein Analysis

525

Amino Acids

59.22

Weight (kDa)

5.82

Isoelectric Point (pI)

41.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rit1_C	PF17184	19 - 306	3.4e-96	Rit1 N-terminal domain
Init_tRNA_PT	PF04179	404 - 513	9.8e-32	Rit1 DUSP-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40570 AT2G40570 AT2G40570
fragaria_vesca	FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070
malus_domestica	MD02G1065300.v1.1 MD15G1196200.v1.1
prunus_persica	Prupe.7G220200_v2.0.a1 Prupe.7G220200_v2.0.a1 Prupe.7G220200_v2.0.a1
pyrus_communis	pycom02g05140
rosa_chinensis	RchiOBHm_Chr2g0091831
rosa_laevigata	RLG00000016255
rosa_multiflora	Rmu_sc0021402.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149700
rosa_rugosa	Rorug02G0021400
rosa_samantha	Rh2AG066000 Rh2BG065500 Rh2CG066900 Rh2DG065100
rosa_wichuraiana	Rw2G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	869
AasI	GACNNNNNNGTC	1 cut(s)	110
Acc36I	ACCTGC	2 cut(s)	866, 1513
AccB7I	CCANNNNNTGG	1 cut(s)	797
AccBSI	CCGCTC	1 cut(s)	741
AccII	CGCG	1 cut(s)	22
AccIII	TCCGGA	1 cut(s)	346
AciI	CCGC	7 cut(s)	45, 303, 340, 424, 512, 741, 1456
AclI	AACGTT	1 cut(s)	194
AclWI	GGATC	4 cut(s)	87, 1008, 1050, 1193
AcoI	YGGCCR	1 cut(s)	229
AcsI	RAATTY	1 cut(s)	770
AcuI	CTGAAG	2 cut(s)	1408, 1538
AcvI	CACGTG	1 cut(s)	207
AfaI	GTAC	2 cut(s)	185, 445
AfiI	CCNNNNNNNGG	2 cut(s)	797, 1508
AflIII	ACRYGT	3 cut(s)	20, 206, 255
AgsI	TTSAA	6 cut(s)	217, 253, 391, 404, 673, 1297
AhdI	GACNNNNNGTC	1 cut(s)	355
AjiI	CACGTC	2 cut(s)	258, 277
AjnI	CCWGG	3 cut(s)	695, 790, 1496
Alw21I	GWGCWC	2 cut(s)	436, 940
AlwI	GGATC	4 cut(s)	87, 1008, 1050, 1193
AlwNI	CAGNNNCTG	2 cut(s)	797, 881
Ama87I	CYCGRG	1 cut(s)	736
Aor13HI	TCCGGA	1 cut(s)	346
AoxI	GGCC	4 cut(s)	140, 175, 229, 1499
ApoI	RAATTY	1 cut(s)	770
ArsI	GACNNNNNNTTYG	4 cut(s)	98, 130, 370, 402
AspLEI	GCGC	1 cut(s)	63
AspS9I	GGNCC	3 cut(s)	141, 246, 878
AsuC2I	CCSGG	1 cut(s)	262
AsuHPI	GGTGA	2 cut(s)	812, 1240
AvaI	CYCGRG	1 cut(s)	736
AvaII	GGWCC	2 cut(s)	246, 878
AxyI	CCTNAGG	1 cut(s)	960
BarI	GAAGNNNNNNTAC	2 cut(s)	1453, 1485
BbrPI	CACGTG	1 cut(s)	207
BbsI	GAAGAC	5 cut(s)	12, 106, 368, 1319, 1468
Bbv12I	GWGCWC	2 cut(s)	436, 940
BbvCI	CCTCAGC	1 cut(s)	1301
BccI	CCATC	5 cut(s)	104, 417, 892, 1403, 1510
BceAI	ACGGC	1 cut(s)	244
BciT130I	CCWGG	3 cut(s)	697, 792, 1498
BciVI	GTATCC	1 cut(s)	10
BcnI	CCSGG	1 cut(s)	262
BfaI	CTAG	1 cut(s)	327
BfmI	CTRYAG	2 cut(s)	1122, 1275
BfuAI	ACCTGC	2 cut(s)	866, 1513
BfuI	GTATCC	1 cut(s)	10
BglII	AGATCT	1 cut(s)	126
BisI	GCNGC	2 cut(s)	45, 425
BlpI	GCTNAGC	2 cut(s)	29, 282
BlsI	GCNGC	2 cut(s)	46, 426
BmcAI	AGTACT	1 cut(s)	445
Bme1390I	CCNGG	4 cut(s)	262, 697, 792, 1498
Bme18I	GGWCC	2 cut(s)	246, 878
BmeRI	GACNNNNNGTC	1 cut(s)	355
BmeT110I	CYCGRG	1 cut(s)	736
BmgBI	CACGTC	2 cut(s)	258, 277
BmgT120I	GGNCC	3 cut(s)	141, 246, 878
BmiI	GGNNCC	1 cut(s)	1402
BmrFI	CCNGG	4 cut(s)	262, 697, 792, 1498
BmsI	GCATC	7 cut(s)	310, 457, 468, 514, 571, 943, 1368
BpiI	GAAGAC	5 cut(s)	12, 106, 368, 1319, 1468
BplI	GAGNNNNNCTC	2 cut(s)	1175, 1207
Bpu10I	CCTNAGC	1 cut(s)	1301
Bpu1102I	GCTNAGC	2 cut(s)	29, 282
BpuMI	CCSGG	1 cut(s)	262
Bsa29I	ATCGAT	1 cut(s)	1062
BsaAI	YACGTR	2 cut(s)	207, 1575
BsaJI	CCNNGG	2 cut(s)	696, 1306
BsaWI	WCCGGW	1 cut(s)	346
Bsc4I	CCNNNNNNNGG	2 cut(s)	797, 1508
Bse1I	ACTGG	1 cut(s)	248
Bse21I	CCTNAGG	1 cut(s)	960
BseAI	TCCGGA	1 cut(s)	346
BseBI	CCWGG	3 cut(s)	697, 792, 1498
BseCI	ATCGAT	1 cut(s)	1062
BseDI	CCNNGG	2 cut(s)	696, 1306
BseGI	GGATG	4 cut(s)	325, 586, 731, 958
BseLI	CCNNNNNNNGG	2 cut(s)	797, 1508
BseMII	CTCAG	6 cut(s)	20, 103, 296, 974, 1148, 1315
BseNI	ACTGG	1 cut(s)	248
BseRI	GAGGAG	2 cut(s)	146, 948
Bsh1236I	CGCG	1 cut(s)	22
Bsh1285I	CGRYCG	1 cut(s)	1066
BshFI	GGCC	4 cut(s)	142, 177, 231, 1501
BshVI	ATCGAT	1 cut(s)	1062
BsiEI	CGRYCG	1 cut(s)	1066
BsiHKAI	GWGCWC	2 cut(s)	436, 940
BsiHKCI	CYCGRG	1 cut(s)	736
BsiSI	CCGG	3 cut(s)	262, 347, 1143
BslFI	GGGAC	4 cut(s)	80, 244, 960, 1028
BslI	CCNNNNNNNGG	2 cut(s)	797, 1508
BsmFI	GGGAC	4 cut(s)	80, 244, 960, 1028
BsmI	GAATGC	1 cut(s)	426
BsnI	GGCC	4 cut(s)	142, 177, 231, 1501
BsoBI	CYCGRG	1 cut(s)	736
Bsp1286I	GDGCHC	2 cut(s)	436, 940
Bsp13I	TCCGGA	1 cut(s)	346
Bsp143I	GATC	8 cut(s)	92, 126, 685, 1000, 1042, 1063, 1198, 1243
Bsp1720I	GCTNAGC	2 cut(s)	29, 282
BspACI	CCGC	7 cut(s)	45, 303, 340, 424, 512, 741, 1456
BspANI	GGCC	4 cut(s)	142, 177, 231, 1501
BspCNI	CTCAG	6 cut(s)	21, 102, 295, 973, 1147, 1314
BspDI	ATCGAT	1 cut(s)	1062
BspEI	TCCGGA	1 cut(s)	346
BspFNI	CGCG	1 cut(s)	22
BspHI	TCATGA	1 cut(s)	688
BspLI	GGNNCC	1 cut(s)	1402
BspMAI	CTGCAG	1 cut(s)	1279
BspMI	ACCTGC	2 cut(s)	866, 1513
BspPI	GGATC	4 cut(s)	87, 1008, 1050, 1193
BspQI	GCTCTTC	1 cut(s)	1543
BsrBI	CCGCTC	1 cut(s)	741
BsrI	ACTGG	1 cut(s)	248
BssECI	CCNNGG	2 cut(s)	696, 1306
BssMI	GATC	8 cut(s)	92, 126, 685, 1000, 1042, 1063, 1198, 1243
BssT1I	CCWWGG	1 cut(s)	1306
Bst2UI	CCWGG	3 cut(s)	697, 792, 1498
Bst4CI	ACNGT	4 cut(s)	395, 576, 661, 970
Bst6I	CTCTTC	1 cut(s)	1543
BstBAI	YACGTR	2 cut(s)	207, 1575
BstC8I	GCNNGC	1 cut(s)	288
BstDEI	CTNAG	7 cut(s)	29, 89, 282, 960, 1134, 1301, 1538
BstF5I	GGATG	4 cut(s)	325, 586, 731, 958
BstFNI	CGCG	1 cut(s)	22
BstHHI	GCGC	1 cut(s)	63
BstKTI	GATC	8 cut(s)	95, 129, 688, 1003, 1045, 1066, 1201, 1246
BstMBI	GATC	8 cut(s)	92, 126, 685, 1000, 1042, 1063, 1198, 1243
BstMCI	CGRYCG	1 cut(s)	1066
BstMWI	GCNNNNNNNGC	3 cut(s)	287, 511, 590
BstNI	CCWGG	3 cut(s)	697, 792, 1498
BstNSI	RCATGY	3 cut(s)	358, 1437, 1570
BstSCI	CCNGG	4 cut(s)	260, 695, 790, 1496
BstSFI	CTRYAG	2 cut(s)	1122, 1275
BstSNI	TACGTA	1 cut(s)	1575
BstUI	CGCG	1 cut(s)	22
BstV2I	GAAGAC	5 cut(s)	12, 106, 368, 1319, 1468
BstX2I	RGATCY	3 cut(s)	92, 126, 1042
BstYI	RGATCY	3 cut(s)	92, 126, 1042
Bsu15I	ATCGAT	1 cut(s)	1062
Bsu36I	CCTNAGG	1 cut(s)	960
BsuI	GTATCC	1 cut(s)	10
BsuRI	GGCC	4 cut(s)	142, 177, 231, 1501
BsuTUI	ATCGAT	1 cut(s)	1062
BtrI	CACGTC	2 cut(s)	258, 277
BtsCI	GGATG	4 cut(s)	325, 586, 731, 958
BtsIMutI	CAGTG	3 cut(s)	966, 1357, 1432
BveI	ACCTGC	2 cut(s)	866, 1513
Cac8I	GCNNGC	1 cut(s)	288
CaiI	CAGNNNCTG	2 cut(s)	797, 881
CciI	TCATGA	1 cut(s)	688
CfoI	GCGC	1 cut(s)	63
Cfr13I	GGNCC	3 cut(s)	141, 246, 878
ClaI	ATCGAT	1 cut(s)	1062
CseI	GACGC	1 cut(s)	11
Csp6I	GTAC	2 cut(s)	184, 444
CviAII	CATG	4 cut(s)	355, 689, 1434, 1567
CviQI	GTAC	2 cut(s)	184, 444
DdeI	CTNAG	7 cut(s)	29, 89, 282, 960, 1134, 1301, 1538
DpnI	GATC	8 cut(s)	94, 128, 687, 1002, 1044, 1065, 1200, 1245
DpnII	GATC	8 cut(s)	92, 126, 685, 1000, 1042, 1063, 1198, 1243
DraI	TTTAAA	1 cut(s)	621
DrdI	GACNNNNNNGTC	1 cut(s)	110
DriI	GACNNNNNGTC	1 cut(s)	355
DseDI	GACNNNNNNGTC	1 cut(s)	110
EaeI	YGGCCR	1 cut(s)	229
Eam1104I	CTCTTC	1 cut(s)	1543
Eam1105I	GACNNNNNGTC	1 cut(s)	355
EarI	CTCTTC	1 cut(s)	1543
Eco105I	TACGTA	1 cut(s)	1575
Eco130I	CCWWGG	1 cut(s)	1306
Eco32I	GATATC	2 cut(s)	648, 1348
Eco47I	GGWCC	2 cut(s)	246, 878
Eco57I	CTGAAG	2 cut(s)	1408, 1538
Eco72I	CACGTG	1 cut(s)	207
Eco81I	CCTNAGG	1 cut(s)	960
Eco88I	CYCGRG	1 cut(s)	736
EcoO109I	RGGNCCY	1 cut(s)	878
EcoRII	CCWGG	3 cut(s)	695, 790, 1496
EcoRV	GATATC	2 cut(s)	648, 1348
EcoT14I	CCWWGG	1 cut(s)	1306
EcoT22I	ATGCAT	2 cut(s)	1361, 1439
ErhI	CCWWGG	1 cut(s)	1306
FaeI	CATG	4 cut(s)	358, 692, 1437, 1570
FaqI	GGGAC	4 cut(s)	80, 244, 960, 1028
FatI	CATG	4 cut(s)	354, 688, 1433, 1566
FauI	CCCGC	1 cut(s)	296
FauNDI	CATATG	1 cut(s)	1224
Fnu4HI	GCNGC	2 cut(s)	45, 425
FokI	GGATG	4 cut(s)	332, 593, 718, 965
Fsp4HI	GCNGC	2 cut(s)	45, 425
FspBI	CTAG	1 cut(s)	327
GlaI	GCGC	1 cut(s)	62
GluI	GCNGC	2 cut(s)	45, 425
HaeIII	GGCC	4 cut(s)	142, 177, 231, 1501
HapII	CCGG	3 cut(s)	262, 347, 1143
HgaI	GACGC	1 cut(s)	11
HhaI	GCGC	1 cut(s)	63
Hin1II	CATG	4 cut(s)	358, 692, 1437, 1570
Hin6I	GCGC	1 cut(s)	61
HinP1I	GCGC	1 cut(s)	61
HincII	GTYRAC	1 cut(s)	1159
HindII	GTYRAC	1 cut(s)	1159
HinfI	GANTC	9 cut(s)	107, 367, 400, 568, 692, 1025, 1184, 1464, 1513
HpaII	CCGG	3 cut(s)	262, 347, 1143
HphI	GGTGA	2 cut(s)	812, 1240
Hpy166II	GTNNAC	3 cut(s)	222, 1159, 1282
Hpy188I	TCNGA	8 cut(s)	92, 372, 769, 897, 1000, 1078, 1137, 1518
Hpy8I	GTNNAC	3 cut(s)	222, 1159, 1282
Hpy99I	CGWCG	5 cut(s)	14, 107, 122, 230, 281
HpyAV	CCTTC	8 cut(s)	176, 259, 292, 913, 936, 1281, 1391, 1414
HpyCH4III	ACNGT	4 cut(s)	395, 576, 661, 970
HpyCH4IV	ACGT	5 cut(s)	194, 206, 257, 276, 1574
HpyF10VI	GCNNNNNNNGC	3 cut(s)	287, 511, 590
HpyF3I	CTNAG	7 cut(s)	29, 89, 282, 960, 1134, 1301, 1538
HpySE526I	ACGT	5 cut(s)	194, 206, 257, 276, 1574
Hsp92II	CATG	4 cut(s)	358, 692, 1437, 1570
HspAI	GCGC	1 cut(s)	61
Kpn2I	TCCGGA	1 cut(s)	346
Kzo9I	GATC	8 cut(s)	92, 126, 685, 1000, 1042, 1063, 1198, 1243
LguI	GCTCTTC	1 cut(s)	1543
LmnI	GCTCC	4 cut(s)	590, 794, 961, 982
LweI	GCATC	7 cut(s)	310, 457, 468, 514, 571, 943, 1368
MaeI	CTAG	1 cut(s)	327
MaeII	ACGT	5 cut(s)	194, 206, 257, 276, 1574
MaeIII	GTNAC	6 cut(s)	209, 964, 987, 1026, 1228, 1427
MalI	GATC	8 cut(s)	94, 128, 687, 1002, 1044, 1065, 1200, 1245
MbiI	CCGCTC	1 cut(s)	741
MboI	GATC	8 cut(s)	92, 126, 685, 1000, 1042, 1063, 1198, 1243
MflI	RGATCY	3 cut(s)	92, 126, 1042
MhlI	GDGCHC	2 cut(s)	436, 940
MluCI	AATT	7 cut(s)	770, 781, 850, 1031, 1069, 1171, 1323
MluI	ACGCGT	1 cut(s)	20
MlyI	GAGTC	6 cut(s)	101, 562, 701, 1034, 1193, 1458
MmeI	TCCRAC	1 cut(s)	558
Mph1103I	ATGCAT	2 cut(s)	1361, 1439
MroI	TCCGGA	1 cut(s)	346
MseI	TTAA	7 cut(s)	620, 830, 972, 1056, 1169, 1259, 1530
MspA1I	CMGCKG	1 cut(s)	28
MspI	CCGG	3 cut(s)	262, 347, 1143
MspR9I	CCNGG	4 cut(s)	262, 697, 792, 1498
Mva1269I	GAATGC	1 cut(s)	426
MvaI	CCWGG	3 cut(s)	697, 792, 1498
MvnI	CGCG	1 cut(s)	22
MwoI	GCNNNNNNNGC	3 cut(s)	287, 511, 590
NciI	CCSGG	1 cut(s)	262
NdeI	CATATG	1 cut(s)	1224
NdeII	GATC	8 cut(s)	92, 126, 685, 1000, 1042, 1063, 1198, 1243
NlaIII	CATG	4 cut(s)	358, 692, 1437, 1570
NlaIV	GGNNCC	1 cut(s)	1402
NmuCI	GTSAC	4 cut(s)	964, 1026, 1228, 1427
NsiI	ATGCAT	2 cut(s)	1361, 1439
NspI	RCATGY	3 cut(s)	358, 1437, 1570
PagI	TCATGA	1 cut(s)	688
PciSI	GCTCTTC	1 cut(s)	1543
PctI	GAATGC	1 cut(s)	426
PfeI	GAWTC	3 cut(s)	367, 400, 1513
PflFI	GACNNNGTC	1 cut(s)	110
PflMI	CCANNNNNTGG	1 cut(s)	797
PkrI	GCNGC	2 cut(s)	46, 426
Ple19I	CGATCG	1 cut(s)	1066
PleI	GAGTC	6 cut(s)	101, 562, 700, 1033, 1192, 1458
PmaCI	CACGTG	1 cut(s)	207
PmlI	CACGTG	1 cut(s)	207
PpsI	GAGTC	6 cut(s)	101, 562, 700, 1033, 1192, 1458
Ppu21I	YACGTR	2 cut(s)	207, 1575
PpuMI	RGGWCCY	1 cut(s)	878
PsiI	TTATAA	1 cut(s)	869
Psp1406I	AACGTT	1 cut(s)	194
Psp5II	RGGWCCY	1 cut(s)	878
Psp6I	CCWGG	3 cut(s)	695, 790, 1496
PspCI	CACGTG	1 cut(s)	207
PspGI	CCWGG	3 cut(s)	695, 790, 1496
PspN4I	GGNNCC	1 cut(s)	1402
PspPI	GGNCC	3 cut(s)	141, 246, 878
PspPPI	RGGWCCY	1 cut(s)	878
PstI	CTGCAG	1 cut(s)	1279
PstNI	CAGNNNCTG	2 cut(s)	797, 881
PsuI	RGATCY	3 cut(s)	92, 126, 1042
PsyI	GACNNNGTC	1 cut(s)	110
PvuI	CGATCG	1 cut(s)	1066
PvuII	CAGCTG	1 cut(s)	28
RsaI	GTAC	2 cut(s)	185, 445
RsaNI	GTAC	2 cut(s)	184, 444
SapI	GCTCTTC	1 cut(s)	1543
SaqAI	TTAA	7 cut(s)	620, 830, 972, 1056, 1169, 1259, 1530
SatI	GCNGC	2 cut(s)	45, 425
Sau3AI	GATC	8 cut(s)	92, 126, 685, 1000, 1042, 1063, 1198, 1243
Sau96I	GGNCC	3 cut(s)	141, 246, 878
ScaI	AGTACT	1 cut(s)	445
SchI	GAGTC	6 cut(s)	101, 562, 701, 1034, 1193, 1458
ScrFI	CCNGG	4 cut(s)	262, 697, 792, 1498
SduI	GDGCHC	2 cut(s)	436, 940
SfaNI	GCATC	7 cut(s)	310, 457, 468, 514, 571, 943, 1368
SfcI	CTRYAG	2 cut(s)	1122, 1275
SinI	GGWCC	2 cut(s)	246, 878
SnaBI	TACGTA	1 cut(s)	1575
Sse9I	AATT	7 cut(s)	770, 781, 850, 1031, 1069, 1171, 1323
SsiI	CCGC	7 cut(s)	45, 303, 340, 424, 512, 741, 1456
SspI	AATATT	1 cut(s)	458
SspMI	CTAG	1 cut(s)	327
StyD4I	CCNGG	4 cut(s)	260, 695, 790, 1496
StyI	CCWWGG	1 cut(s)	1306
TaaI	ACNGT	4 cut(s)	395, 576, 661, 970
TaiI	ACGT	5 cut(s)	197, 209, 260, 279, 1577
TaqI	TCGA	8 cut(s)	169, 359, 398, 412, 546, 940, 1062, 1407
TasI	AATT	7 cut(s)	770, 781, 850, 1031, 1069, 1171, 1323
TatI	WGTACW	1 cut(s)	443
TauI	GCSGC	2 cut(s)	47, 427
TfiI	GAWTC	3 cut(s)	367, 400, 1513
Tru1I	TTAA	7 cut(s)	620, 830, 972, 1056, 1169, 1259, 1530
Tru9I	TTAA	7 cut(s)	620, 830, 972, 1056, 1169, 1259, 1530
TscAI	CASTG	3 cut(s)	973, 1357, 1432
TseFI	GTSAC	4 cut(s)	964, 1026, 1228, 1427
Tsp45I	GTSAC	4 cut(s)	964, 1026, 1228, 1427
TspDTI	ATGAA	6 cut(s)	468, 690, 822, 1095, 1211, 1407
TspRI	CASTG	3 cut(s)	973, 1357, 1432
Tth111I	GACNNNGTC	1 cut(s)	110
Van91I	CCANNNNNTGG	1 cut(s)	797
VpaK11BI	GGWCC	2 cut(s)	246, 878
XapI	RAATTY	1 cut(s)	770
XceI	RCATGY	3 cut(s)	358, 1437, 1570
XspI	CTAG	1 cut(s)	327
ZrmI	AGTACT	1 cut(s)	445
Zsp2I	ATGCAT	2 cut(s)	1361, 1439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.