Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0003887

Physical Location & Seq

Genomic Coordinates Reverse (-)

5291621 .. 5295614

Gene Structure 3994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1065300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGAAGAGGACGATGGCACGAAGCAGCTGAGCATATACAGGGCGGCGAGGACAATAAAACGACGGCAGAACACCCTCTACAACGCCCTCAAATCAATCTACGACGACTCAATCTTTGTCGGAGAAATCTCCCAGCTCTGGCCGGACCTCCCTCTCCTCGCCAACCTCCGCTGCGGCCTCTGGTATTCTCCGACTGCCAACTTCCACTCCACCTGCTACTTCAAATCCACCGACGGCCACACCAACAACTGGTCCTTCAACACCTCCCGCCTCAACCTCCACGTCGCCCAACTTGCCGGACAGAAAGGAGGGTGCTTTATTGTGGATGCGACTCGGAAGGGGAAGCGATTTCCGGATAGTATGTCGAAGACGATTCCGATTTGGACATGTGTTTTGAATCGGGCGATTTATAGGCATTTGAAGAAAGATCATCAGAGTGATTTGTTCAATGATGAGGAGCTAAGTACTTCTGGTGAACATTCTGAAGAGAATGGACAGACCAATTTTGATTGGGATTGTTCCTTGCATCTTCCTCTTTGGGTTTCAGAAACAGAGAAGGCATCTATCGAGGATCGATTAGACGAATGGACTCAACAGTTGGAAGCCAGCGGTGCTGACATTGCCTCTCTTGCTTCTTTATTGAAAAAGCCGCTGCGCCCTCTGTGGATATCACAAAAGACTGTGATTTGGTTGAATGAAGTTCCGGACCATGAATCCTGGGATTTCACACCCATCATTCTTGTTTCTGCCTCTGCCTCTAATGGTGTTGTACCACACAGGACTAGTTCGGAATTTAGCTGGAATTACATAGCAGGAGCCGGTGATGATGAAGAAAGCTGGGCAAAGGGTTTAACACCCACCCTCTTCTGGAACCATGCCTATGATATTATCGATGTGGGGCCTGTTTTGTGTAACCAGATGGTAGCTGATATAGTTGAGAAGGATCGTGTTTATCGTGCTCGAAGGGGACAAATTGCTCCTCAAGTTTCTGTCAAGGCCCCAAATTTGGTAGAAAACTCAGTTCATTGTTTGCTCGGCGACTCGTTGTTGCCTTTGGATATTTCAAACACGAATATGGATTTAAATCCTTGTGATGAAGATTGTCCTATGTCATGGATGGGTTCAACTGGCCTTGCTGTAGGCATATCTCCAACCACTGCAGTATCTAAAGTTGATTGCATATTGAATTGTGATCAAGAGTCAATCCCTGTTTCTCATCGGAATGCTAAAGCATATATGCATCTTCCTATGGTGACATCAAAGTTTGATCGGTTTTCCTTGTTGAATAATCTCCCTTCTGCTGTGAACTTTGCAAAGTTGAATCTAAGTGAAGGGAAGACCCTCCTAATTTGTTGCCACAACGGGGAAGATATCAGCGTATGTATATGTCTGGCAATCTTGACTTCATTATTTGATGATAGAGGAACCTTTGATGGTGGAAGCTTCTTCAGTGAGACATGCATTACAAAATTAGAAATGCGGAGAAGACTCGTAACTATCTGTAAATATGTAGTAAATGCAAGGCCTTCAAGAGGAAACCTGAAGCAAGTTTTTGGTTTTCTTAATGGCGGAAGAGCTGTCGTGGAGAACGGGCCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006464 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016757 GO:0016763 GO:0019538 GO:0019988 GO:0034470 GO:0034641 GO:0034660 GO:0036211 GO:0043170 GO:0043399 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Init_tRNA_PT Rit1_C

Protein Analysis

534

Amino Acids

59.51

Weight (kDa)

5.65

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rit1_C	PF17184	19 - 313	3.7e-99	Rit1 N-terminal domain
Init_tRNA_PT	PF04179	412 - 521	2.5e-31	Rit1 DUSP-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40570 AT2G40570 AT2G40570
fragaria_vesca	FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070 FvH4_1g06070
malus_domestica	MD02G1065300.v1.1 MD15G1196200.v1.1
prunus_persica	Prupe.7G220200_v2.0.a1 Prupe.7G220200_v2.0.a1 Prupe.7G220200_v2.0.a1
pyrus_communis	pycom02g05140
rosa_chinensis	RchiOBHm_Chr2g0091831
rosa_laevigata	RLG00000016255
rosa_multiflora	Rmu_sc0021402.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149700
rosa_rugosa	Rorug02G0021400
rosa_samantha	Rh2AG066000 Rh2BG065500 Rh2CG066900 Rh2DG065100
rosa_wichuraiana	Rw2G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	221
Acc36I	ACCTGC	1 cut(s)	221
AccB7I	CCANNNNNTGG	1 cut(s)	249
AccIII	TCCGGA	2 cut(s)	352, 703
AciI	CCGC	8 cut(s)	44, 169, 174, 268, 609, 650, 1480, 1569
AclWI	GGATC	2 cut(s)	579, 951
AcoI	YGGCCR	2 cut(s)	140, 235
AcsI	RAATTY	2 cut(s)	791, 1003
AcuI	CTGAAG	3 cut(s)	504, 1432, 1562
AfaI	GTAC	2 cut(s)	466, 771
AfiI	CCNNNNNNNGG	6 cut(s)	138, 249, 867, 1006, 1363, 1532
AflIII	ACRYGT	1 cut(s)	386
AhlI	ACTAGT	1 cut(s)	782
AjiI	CACGTC	1 cut(s)	283
AjnI	CCWGG	1 cut(s)	716
AluBI	AGCT	8 cut(s)	28, 136, 460, 798, 837, 926, 1443, 1577
AluI	AGCT	8 cut(s)	28, 136, 460, 798, 837, 926, 1443, 1577
Alw21I	GWGCWC	1 cut(s)	961
Alw26I	GTCTC	1 cut(s)	1448
AlwI	GGATC	2 cut(s)	579, 951
Aor13HI	TCCGGA	2 cut(s)	352, 703
AoxI	GGCC	8 cut(s)	140, 175, 235, 899, 996, 1129, 1523, 1592
ApeKI	GCWGC	3 cut(s)	25, 171, 652
ApoI	RAATTY	2 cut(s)	791, 1003
ArsI	GACNNNNNNTTYG	4 cut(s)	98, 130, 376, 408
AspLEI	GCGC	1 cut(s)	657
AspS9I	GGNCC	6 cut(s)	145, 252, 706, 899, 997, 1592
AsuHPI	GGTGA	3 cut(s)	485, 833, 1264
AvaII	GGWCC	3 cut(s)	145, 252, 706
BaeI	ACNNNNGTAYC	2 cut(s)	1146, 1179
BbsI	GAAGAC	3 cut(s)	374, 1343, 1492
Bbv12I	GWGCWC	1 cut(s)	961
BbvI	GCAGC	3 cut(s)	37, 158, 639
BccI	CCATC	5 cut(s)	8, 740, 913, 1111, 1427
BceAI	ACGGC	2 cut(s)	80, 250
BciT130I	CCWGG	1 cut(s)	718
BclI	TGATCA	1 cut(s)	1192
BcoDI	GTCTC	1 cut(s)	1448
BcuI	ACTAGT	1 cut(s)	782
BfaI	CTAG	1 cut(s)	783
BfmI	CTRYAG	2 cut(s)	1137, 1158
BfuAI	ACCTGC	1 cut(s)	221
BisI	GCNGC	6 cut(s)	26, 45, 172, 175, 650, 653
BlpI	GCTNAGC	1 cut(s)	29
BlsI	GCNGC	6 cut(s)	27, 46, 173, 176, 651, 654
BmcAI	AGTACT	1 cut(s)	466
Bme1390I	CCNGG	1 cut(s)	718
Bme18I	GGWCC	3 cut(s)	145, 252, 706
BmgBI	CACGTC	1 cut(s)	283
BmgT120I	GGNCC	6 cut(s)	145, 252, 706, 899, 997, 1592
BmiI	GGNNCC	5 cut(s)	817, 872, 900, 999, 1426
BmrFI	CCNGG	1 cut(s)	718
BmsI	GCATC	4 cut(s)	316, 535, 569, 1249
BpiI	GAAGAC	3 cut(s)	374, 1343, 1492
Bpu1102I	GCTNAGC	1 cut(s)	29
BpuEI	CTTGAG	1 cut(s)	966
Bsa29I	ATCGAT	2 cut(s)	574, 891
BsaBI	GATNNNNATC	1 cut(s)	1083
BsaJI	CCNNGG	1 cut(s)	717
BsaWI	WCCGGW	2 cut(s)	352, 703
BsaXI	ACNNNNNCTCC	2 cut(s)	191, 221
Bsc4I	CCNNNNNNNGG	6 cut(s)	138, 249, 867, 1006, 1363, 1532
Bse118I	RCCGGY	1 cut(s)	818
Bse1I	ACTGG	2 cut(s)	254, 1132
Bse3DI	GCAATG	1 cut(s)	618
Bse8I	GATNNNNATC	1 cut(s)	1083
BseAI	TCCGGA	2 cut(s)	352, 703
BseBI	CCWGG	1 cut(s)	718
BseCI	ATCGAT	2 cut(s)	574, 891
BseDI	CCNNGG	1 cut(s)	717
BseGI	GGATG	2 cut(s)	331, 1122
BseJI	GATNNNNATC	1 cut(s)	1083
BseLI	CCNNNNNNNGG	6 cut(s)	138, 249, 867, 1006, 1363, 1532
BseMI	GCAATG	1 cut(s)	618
BseMII	CTCAG	2 cut(s)	20, 1032
BseNI	ACTGG	2 cut(s)	254, 1132
BseRI	GAGGAG	3 cut(s)	146, 470, 969
BseXI	GCAGC	3 cut(s)	37, 158, 639
BseYI	CCCAGC	2 cut(s)	132, 837
BshFI	GGCC	8 cut(s)	142, 177, 237, 901, 998, 1131, 1525, 1594
BshVI	ATCGAT	2 cut(s)	574, 891
BsiHKAI	GWGCWC	1 cut(s)	961
BsiSI	CCGG	5 cut(s)	143, 297, 353, 704, 819
BslFI	GGGAC	1 cut(s)	981
BslI	CCNNNNNNNGG	6 cut(s)	138, 249, 867, 1006, 1363, 1532
BsmAI	GTCTC	1 cut(s)	1448
BsmFI	GGGAC	1 cut(s)	981
BsmI	GAATGC	1 cut(s)	1228
BsnI	GGCC	8 cut(s)	142, 177, 237, 901, 998, 1131, 1525, 1594
Bsp1286I	GDGCHC	1 cut(s)	961
Bsp13I	TCCGGA	2 cut(s)	352, 703
Bsp143I	GATC	5 cut(s)	427, 571, 943, 1192, 1267
Bsp1720I	GCTNAGC	1 cut(s)	29
BspACI	CCGC	8 cut(s)	44, 169, 174, 268, 609, 650, 1480, 1569
BspANI	GGCC	8 cut(s)	142, 177, 237, 901, 998, 1131, 1525, 1594
BspCNI	CTCAG	2 cut(s)	21, 1031
BspDI	ATCGAT	2 cut(s)	574, 891
BspEI	TCCGGA	2 cut(s)	352, 703
BspLI	GGNNCC	5 cut(s)	817, 872, 900, 999, 1426
BspMAI	CTGCAG	1 cut(s)	1162
BspMI	ACCTGC	1 cut(s)	221
BspPI	GGATC	2 cut(s)	579, 951
BspQI	GCTCTTC	1 cut(s)	1567
BsrDI	GCAATG	1 cut(s)	618
BsrFI	RCCGGY	1 cut(s)	818
BsrI	ACTGG	2 cut(s)	254, 1132
BssAI	RCCGGY	1 cut(s)	818
BssECI	CCNNGG	1 cut(s)	717
BssMI	GATC	5 cut(s)	427, 571, 943, 1192, 1267
Bst2UI	CCWGG	1 cut(s)	718
Bst4CI	ACNGT	2 cut(s)	597, 682
Bst6I	CTCTTC	3 cut(s)	480, 869, 1567
BstC8I	GCNNGC	2 cut(s)	607, 1596
BstDEI	CTNAG	5 cut(s)	29, 461, 1018, 1325, 1599
BstENI	CCTNNNNNAGG	1 cut(s)	1530
BstF5I	GGATG	2 cut(s)	331, 1122
BstHHI	GCGC	1 cut(s)	657
BstKTI	GATC	5 cut(s)	430, 574, 946, 1195, 1270
BstMAI	GTCTC	1 cut(s)	1448
BstMBI	GATC	5 cut(s)	427, 571, 943, 1192, 1267
BstMWI	GCNNNNNNNGC	4 cut(s)	293, 611, 620, 629
BstNI	CCWGG	1 cut(s)	718
BstNSI	RCATGY	2 cut(s)	390, 1461
BstSCI	CCNGG	1 cut(s)	716
BstSFI	CTRYAG	2 cut(s)	1137, 1158
BstV1I	GCAGC	3 cut(s)	37, 158, 639
BstV2I	GAAGAC	3 cut(s)	374, 1343, 1492
Bsu15I	ATCGAT	2 cut(s)	574, 891
BsuRI	GGCC	8 cut(s)	142, 177, 237, 901, 998, 1131, 1525, 1594
BsuTUI	ATCGAT	2 cut(s)	574, 891
BtrI	CACGTC	1 cut(s)	283
BtsCI	GGATG	2 cut(s)	331, 1122
BtsI	GCAGTG	1 cut(s)	1155
BtsIMutI	CAGTG	2 cut(s)	1155, 1456
BveI	ACCTGC	1 cut(s)	221
Cac8I	GCNNGC	2 cut(s)	607, 1596
CfoI	GCGC	1 cut(s)	657
Cfr10I	RCCGGY	1 cut(s)	818
Cfr13I	GGNCC	6 cut(s)	145, 252, 706, 899, 997, 1592
ClaI	ATCGAT	2 cut(s)	574, 891
Csp6I	GTAC	2 cut(s)	465, 770
CviAII	CATG	5 cut(s)	387, 710, 875, 1113, 1458
CviQI	GTAC	2 cut(s)	465, 770
DdeI	CTNAG	5 cut(s)	29, 461, 1018, 1325, 1599
DpnI	GATC	5 cut(s)	429, 573, 945, 1194, 1269
DpnII	GATC	5 cut(s)	427, 571, 943, 1192, 1267
DraI	TTTAAA	1 cut(s)	1083
EaeI	YGGCCR	2 cut(s)	140, 235
Eam1104I	CTCTTC	3 cut(s)	480, 869, 1567
EarI	CTCTTC	3 cut(s)	480, 869, 1567
EciI	GGCGGA	1 cut(s)	1584
Eco147I	AGGCCT	1 cut(s)	1525
Eco32I	GATATC	2 cut(s)	669, 1372
Eco47I	GGWCC	3 cut(s)	145, 252, 706
Eco57I	CTGAAG	3 cut(s)	504, 1432, 1562
EcoNI	CCTNNNNNAGG	1 cut(s)	1530
EcoO109I	RGGNCCY	2 cut(s)	899, 997
EcoRII	CCWGG	1 cut(s)	716
EcoRV	GATATC	2 cut(s)	669, 1372
EcoT22I	ATGCAT	2 cut(s)	1242, 1463
FaeI	CATG	5 cut(s)	390, 713, 878, 1116, 1461
FaqI	GGGAC	1 cut(s)	981
FatI	CATG	5 cut(s)	386, 709, 874, 1112, 1457
FauI	CCCGC	1 cut(s)	275
FbaI	TGATCA	1 cut(s)	1192
Fnu4HI	GCNGC	6 cut(s)	26, 45, 172, 175, 650, 653
FokI	GGATG	2 cut(s)	338, 1129
Fsp4HI	GCNGC	6 cut(s)	26, 45, 172, 175, 650, 653
FspBI	CTAG	1 cut(s)	783
GlaI	GCGC	1 cut(s)	656
GluI	GCNGC	6 cut(s)	26, 45, 172, 175, 650, 653
GsaI	CCCAGC	2 cut(s)	136, 841
HaeIII	GGCC	8 cut(s)	142, 177, 237, 901, 998, 1131, 1525, 1594
HapII	CCGG	5 cut(s)	143, 297, 353, 704, 819
HhaI	GCGC	1 cut(s)	657
Hin1II	CATG	5 cut(s)	390, 713, 878, 1116, 1461
Hin6I	GCGC	1 cut(s)	655
HinP1I	GCGC	1 cut(s)	655
HindIII	AAGCTT	1 cut(s)	1441
HpaII	CCGG	5 cut(s)	143, 297, 353, 704, 819
HphI	GGTGA	3 cut(s)	485, 833, 1264
Hpy166II	GTNNAC	2 cut(s)	476, 1306
Hpy188I	TCNGA	9 cut(s)	122, 192, 336, 378, 435, 484, 547, 790, 1221
Hpy188III	TCNNGA	6 cut(s)	353, 704, 868, 1196, 1399, 1530
Hpy8I	GTNNAC	2 cut(s)	476, 1306
Hpy99I	CGWCG	4 cut(s)	66, 107, 236, 287
HpyAV	CCTTC	8 cut(s)	265, 331, 550, 934, 957, 1305, 1325, 1536
HpyCH4III	ACNGT	2 cut(s)	597, 682
HpyCH4IV	ACGT	1 cut(s)	282
HpyCH4V	TGCA	7 cut(s)	526, 1160, 1179, 1240, 1313, 1461, 1520
HpyF10VI	GCNNNNNNNGC	4 cut(s)	293, 611, 620, 629
HpyF3I	CTNAG	5 cut(s)	29, 461, 1018, 1325, 1599
HpySE526I	ACGT	1 cut(s)	282
Hsp92II	CATG	5 cut(s)	390, 713, 878, 1116, 1461
HspAI	GCGC	1 cut(s)	655
Kpn2I	TCCGGA	2 cut(s)	352, 703
Ksp22I	TGATCA	1 cut(s)	1192
Kzo9I	GATC	5 cut(s)	427, 571, 943, 1192, 1267
LguI	GCTCTTC	1 cut(s)	1567
LmnI	GCTCC	3 cut(s)	457, 815, 982
Lsp1109I	GCAGC	3 cut(s)	37, 158, 639
LweI	GCATC	4 cut(s)	316, 535, 569, 1249
MaeI	CTAG	1 cut(s)	783
MaeII	ACGT	1 cut(s)	282
MaeIII	GTNAC	3 cut(s)	911, 1252, 1492
MalI	GATC	5 cut(s)	429, 573, 945, 1194, 1269
MboI	GATC	5 cut(s)	427, 571, 943, 1192, 1267
MhlI	GDGCHC	1 cut(s)	961
MluCI	AATT	8 cut(s)	502, 791, 802, 972, 1003, 1186, 1347, 1469
MlyI	GAGTC	6 cut(s)	101, 325, 583, 1034, 1208, 1482
MmeI	TCCRAC	4 cut(s)	100, 215, 579, 1175
Mph1103I	ATGCAT	2 cut(s)	1242, 1463
MroI	TCCGGA	2 cut(s)	352, 703
MseI	TTAA	3 cut(s)	851, 1082, 1563
MslI	CAYNNNNRTG	4 cut(s)	435, 879, 1073, 1221
MspA1I	CMGCKG	4 cut(s)	28, 171, 609, 652
MspI	CCGG	5 cut(s)	143, 297, 353, 704, 819
MspR9I	CCNGG	1 cut(s)	718
Mva1269I	GAATGC	1 cut(s)	1228
MvaI	CCWGG	1 cut(s)	718
MwoI	GCNNNNNNNGC	4 cut(s)	293, 611, 620, 629
NdeII	GATC	5 cut(s)	427, 571, 943, 1192, 1267
NlaIII	CATG	5 cut(s)	390, 713, 878, 1116, 1461
NlaIV	GGNNCC	5 cut(s)	817, 872, 900, 999, 1426
NmeAIII	GCCGAG	1 cut(s)	1014
NmuCI	GTSAC	1 cut(s)	1252
NsiI	ATGCAT	2 cut(s)	1242, 1463
NspI	RCATGY	2 cut(s)	390, 1461
PaqCI	CACCTGC	1 cut(s)	221
PceI	AGGCCT	1 cut(s)	1525
PciI	ACATGT	1 cut(s)	386
PciSI	GCTCTTC	1 cut(s)	1567
PcsI	WCGNNNNNNNCGW	1 cut(s)	952
PctI	GAATGC	1 cut(s)	1228
PfeI	GAWTC	4 cut(s)	373, 397, 713, 1321
PflMI	CCANNNNNTGG	1 cut(s)	249
PkrI	GCNGC	6 cut(s)	27, 46, 173, 176, 651, 654
PleI	GAGTC	6 cut(s)	101, 325, 583, 1034, 1207, 1482
PpsI	GAGTC	6 cut(s)	101, 325, 583, 1034, 1207, 1482
PscI	ACATGT	1 cut(s)	386
Psp6I	CCWGG	1 cut(s)	716
PspFI	CCCAGC	2 cut(s)	132, 837
PspGI	CCWGG	1 cut(s)	716
PspN4I	GGNNCC	5 cut(s)	817, 872, 900, 999, 1426
PspPI	GGNCC	6 cut(s)	145, 252, 706, 899, 997, 1592
PsrI	GAACNNNNNNTAC	2 cut(s)	62, 94
PstI	CTGCAG	1 cut(s)	1162
PvuII	CAGCTG	1 cut(s)	28
RsaI	GTAC	2 cut(s)	466, 771
RsaNI	GTAC	2 cut(s)	465, 770
RseI	CAYNNNNRTG	4 cut(s)	435, 879, 1073, 1221
SapI	GCTCTTC	1 cut(s)	1567
SaqAI	TTAA	3 cut(s)	851, 1082, 1563
SatI	GCNGC	6 cut(s)	26, 45, 172, 175, 650, 653
Sau3AI	GATC	5 cut(s)	427, 571, 943, 1192, 1267
Sau96I	GGNCC	6 cut(s)	145, 252, 706, 899, 997, 1592
ScaI	AGTACT	1 cut(s)	466
SchI	GAGTC	6 cut(s)	101, 325, 583, 1034, 1208, 1482
ScrFI	CCNGG	1 cut(s)	718
SduI	GDGCHC	1 cut(s)	961
SfaNI	GCATC	4 cut(s)	316, 535, 569, 1249
SfcI	CTRYAG	2 cut(s)	1137, 1158
SinI	GGWCC	3 cut(s)	145, 252, 706
SmiI	ATTTAAAT	1 cut(s)	1083
SmiMI	CAYNNNNRTG	4 cut(s)	435, 879, 1073, 1221
SmlI	CTYRAG	1 cut(s)	981
SmoI	CTYRAG	1 cut(s)	981
SpeI	ACTAGT	1 cut(s)	782
Sse9I	AATT	8 cut(s)	502, 791, 802, 972, 1003, 1186, 1347, 1469
SseBI	AGGCCT	1 cut(s)	1525
SsiI	CCGC	8 cut(s)	44, 169, 174, 268, 609, 650, 1480, 1569
SspMI	CTAG	1 cut(s)	783
StuI	AGGCCT	1 cut(s)	1525
StyD4I	CCNGG	1 cut(s)	716
SwaI	ATTTAAAT	1 cut(s)	1083
TaaI	ACNGT	2 cut(s)	597, 682
TaiI	ACGT	1 cut(s)	285
TaqI	TCGA	5 cut(s)	365, 567, 574, 891, 961
TasI	AATT	8 cut(s)	502, 791, 802, 972, 1003, 1186, 1347, 1469
TatI	WGTACW	1 cut(s)	464
TauI	GCSGC	3 cut(s)	47, 177, 652
TfiI	GAWTC	4 cut(s)	373, 397, 713, 1321
Tru1I	TTAA	3 cut(s)	851, 1082, 1563
Tru9I	TTAA	3 cut(s)	851, 1082, 1563
TscAI	CASTG	2 cut(s)	1162, 1456
TseFI	GTSAC	1 cut(s)	1252
TseI	GCWGC	3 cut(s)	25, 171, 652
Tsp45I	GTSAC	1 cut(s)	1252
TspDTI	ATGAA	6 cut(s)	711, 726, 843, 1013, 1110, 1395
TspRI	CASTG	2 cut(s)	1162, 1456
Van91I	CCANNNNNTGG	1 cut(s)	249
VpaK11BI	GGWCC	3 cut(s)	145, 252, 706
XagI	CCTNNNNNAGG	1 cut(s)	1530
XapI	RAATTY	2 cut(s)	791, 1003
XceI	RCATGY	2 cut(s)	390, 1461
XspI	CTAG	1 cut(s)	783
ZrmI	AGTACT	1 cut(s)	466
Zsp2I	ATGCAT	2 cut(s)	1242, 1463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.