Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012171

Physical Location & Seq

Genomic Coordinates Forward (+)

16976636 .. 16979650

Gene Structure 3015 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G40700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGATGAAGAGAGCCCAACAATCGGCAAGAGAAACAAAGCAAGAAGCTAAAGATGCTAGCAAAGCGAAGAGCGGTTTGTTCGCTTCTTGTTCCTTCTCTTCACTTGGTTTAGATACCAAGCTCTCTGACCAGCTCAAAGAAAGGATGGGTTTTGAAGCTCCTACTCTTGTACAAGCTCAAGCAATTCCTGTTATTCTCTCTGGTCGAGATGTACTTGTTAATGCTCCAACCGGTACTGGAAAGACTATAGCGTATTTGGCACCCCTCATCCATCACTTGCAGGGTCATTCTCCTAAGGTTGATCGTTCTCATGGAACTTTTGCTTTGGTGATTGTGCCTACACGGGAACTATGCCTTCAGGTGTATGAAACCTTGGAGAAGTTACTGCATCGGTTCCATTGGATAGTCCCTGGCTATGTTATGGGAGGAGAGAAAAAGGCTAAAGAAAAGGCTAGATTAAGGAAAGGAATATCCATTCTAATTGCAACCCCGGGACGCCTTCTTGACCATTTGAAGAACACAGCTTCATTTGTGCACAAAAATCTGCGTTGGGTCATCTTTGATGAAGCTGATAGCATTCTCGAATTAGGTTATGGGAAGGAGATAGAACAGATAATTAAGCTTCTAGGTTCAGGGCAAAACGAGCAAGGGGAAGAAGATGATATTGTTCCAAAGGGTATTCAGAAGCAGAACTTGTTATTGTCAGCAACATTGAATGATAAAGTTAACGATCTTGCAAAACTTAGTTTGGACGATCCGGTAATGATTGGTCTTGACAACACCAAATTGCAACAAAATCTATCAATAGAGTCTCCTGCGGCTCCTGACTCTGATGCGGAAGATATGGTAATTCATGTTAACAAATCCGCAAACCCTTTATCTGAGGACTATGGAATACCATCACAGCTGGTACAGAGATATCTTAGAGTGCCATGTGGTGCACGGCTTGTGGCACTTCTTTCTGTTCTCAAGAACCTTTTTGAAAGAGAAGCTTCTCAAAAGGTGGTCGTCTTCTTTTCGACACGTGATGCTGTAGATTTTCATTACTCACTTCTGAGTGAATTCCAGTGGCCACCGAATTCTGAGACAGAAGAGGAGGGGACTAAAGAGTTGTTTCTCAAGTGCAAAACGTTCCGGTTACATGGAAGTATGGAGCAGGAGGATAGAAGATCTGCGTTTGGGACCTTTAAAACAGAGAAGCAGGCTGTTCTGTTGAGTACAGATGTTGCTGCTAGAGGCTTGGATTTCCCAAAAGTAAGATGTATTATACAATATGACTGTCCCGGGGAAGCTACCGAGTATGTGCATAGAGTTGGTAGAACAGCTCGTATTGGTGAAAAAGGAGAAGCCTTGTTATTTCTACAACCGATTGAAATAGACTATCTTAAGGAGCTGAAGAAACATGGTGCATCACTTACAGAGTACCCTCTTATGAAAGTACTTGATAAATTTCCCATACCCGGCAATATGCCCCGAATCAAAAAGGTCCTATCTCTAGAATCCCATCCATGGGTCATATCTCTGCAGAGAGCTCTTGAATCCCTTACTTACGCCGAGCCAAAGATGAAGAGCCTGGCCAAGAATGCATTTGTCTCTTGGGTTAGGGGATATGCAGCTCACAAGGGAGAGCTCAAGAGTATTTTCGTGGTGAAGAAGCTTCACTTGGGTCATGTCGCCAAGAGTTTTGCTCTGAGAGAACAACCGTCTTTAGTTGGGAAATCACATCACAAGGAAACAATGAAGAGAAAGAGAGACGAACGTCAAAAAGGGCAACAAGGTAAGAAGAGAAAGAAGATGAGTGGTACTGGCAATAGAAGTACACAAAAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

610

Amino Acids

68.34

Weight (kDa)

9.41

Isoelectric Point (pI)

39.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	56 - 244	2.1e-43	DEAD/DEAH box helicase
ResIII	PF04851	67 - 193	1.2e-09	Type III restriction enzyme, res subunit
Helicase_C	PF00271	321 - 445	3.3e-25	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	520 - 569	4.2e-19	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40700
fragaria_vesca	FvH4_1g09140 FvH4_1g09140 FvH4_1g09140
malus_domestica	MD02G1096800.v1.1
prunus_persica	Prupe.7G194100_v2.0.a1
pyrus_communis	pycom02g07680 pycom15g19610
rosa_chinensis	RchiOBHm_Chr2g0095531
rosa_laevigata	RLG00000016576
rosa_multiflora	Rmu_co8308315.1_g000001 Rmu_co8333539.1_g000001
rosa_roxburghii	Rroxscaffold_2G00146220
rosa_rugosa	Rorug02G0052200
rosa_samantha	Rh2AG100000 Rh2BG101400 Rh2CG103600 Rh2DG100900
rosa_wichuraiana	Rw2G007590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	259
AccBSI	CCGCTC	1 cut(s)	72
AciI	CCGC	4 cut(s)	72, 818, 836, 867
AclI	AACGTT	1 cut(s)	1130
AclWI	GGATC	1 cut(s)	749
AcoI	YGGCCR	2 cut(s)	1070, 1575
AcsI	RAATTY	3 cut(s)	1061, 1078, 1448
AcuI	CTGAAG	2 cut(s)	341, 1415
AcvI	CACGTG	1 cut(s)	1025
AcyI	GRCGYC	1 cut(s)	496
AfaI	GTAC	9 cut(s)	171, 213, 235, 912, 1219, 1424, 1440, 1804, 1819
AfiI	CCNNNNNNNGG	4 cut(s)	22, 1460, 1509, 1510
AflII	CTTAAG	1 cut(s)	1385
AflIII	ACRYGT	1 cut(s)	1022
AgeI	ACCGGT	1 cut(s)	230
AgsI	TTSAA	6 cut(s)	155, 514, 715, 983, 1373, 1538
AjnI	CCWGG	2 cut(s)	409, 1572
AjuI	GAANNNNNNNTTGG	2 cut(s)	1646, 1678
Alw21I	GWGCWC	4 cut(s)	537, 943, 1534, 1632
Alw26I	GTCTC	4 cut(s)	816, 1079, 1597, 1746
Alw44I	GTGCAC	2 cut(s)	533, 939
AlwI	GGATC	1 cut(s)	749
Ama87I	CYCGRG	2 cut(s)	490, 1283
AoxI	GGCC	2 cut(s)	1070, 1575
ApaLI	GTGCAC	2 cut(s)	533, 939
ApeKI	GCWGC	2 cut(s)	1229, 1613
ApoI	RAATTY	3 cut(s)	1061, 1078, 1448
AsiGI	ACCGGT	1 cut(s)	230
AspS9I	GGNCC	2 cut(s)	1182, 1486
AsuC2I	CCSGG	5 cut(s)	491, 492, 1284, 1285, 1461
AsuHPI	GGTGA	3 cut(s)	340, 1346, 1660
AsuNHI	GCTAGC	1 cut(s)	56
AvaI	CYCGRG	2 cut(s)	490, 1283
AvaII	GGWCC	2 cut(s)	1182, 1486
AxyI	CCTNAGG	1 cut(s)	294
BaeGI	GKGCMC	2 cut(s)	537, 943
BalI	TGGCCA	2 cut(s)	1072, 1577
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	3 cut(s)	16, 1534, 1632
BbrPI	CACGTG	1 cut(s)	1025
BbsI	GAAGAC	1 cut(s)	1003
Bbv12I	GWGCWC	4 cut(s)	537, 943, 1534, 1632
BbvI	GCAGC	2 cut(s)	1216, 1625
BccI	CCATC	4 cut(s)	139, 279, 907, 1512
BceAI	ACGGC	1 cut(s)	959
BciT130I	CCWGG	2 cut(s)	411, 1574
BcnI	CCSGG	5 cut(s)	491, 492, 1284, 1285, 1461
BcoDI	GTCTC	4 cut(s)	816, 1079, 1597, 1746
BfaI	CTAG	5 cut(s)	57, 453, 626, 1233, 1496
BfmI	CTRYAG	3 cut(s)	246, 1032, 1523
BfrI	CTTAAG	1 cut(s)	1385
BglII	AGATCT	1 cut(s)	1169
BisI	GCNGC	3 cut(s)	819, 1230, 1614
BlsI	GCNGC	3 cut(s)	820, 1231, 1615
BmcAI	AGTACT	1 cut(s)	1440
Bme1390I	CCNGG	7 cut(s)	411, 491, 492, 1284, 1285, 1461, 1574
Bme18I	GGWCC	2 cut(s)	1182, 1486
BmeT110I	CYCGRG	2 cut(s)	490, 1283
BmgT120I	GGNCC	2 cut(s)	1182, 1486
BmiI	GGNNCC	4 cut(s)	261, 395, 822, 1183
BmrFI	CCNGG	7 cut(s)	411, 491, 492, 1284, 1285, 1461, 1574
BmsI	GCATC	5 cut(s)	43, 397, 823, 1018, 1418
BmtI	GCTAGC	1 cut(s)	60
BoxI	GACNNNNGTC	1 cut(s)	1758
BpiI	GAAGAC	1 cut(s)	1003
BplI	GAGNNNNNCTC	2 cut(s)	1672, 1704
BpuEI	CTTGAG	4 cut(s)	162, 953, 1103, 1616
BpuMI	CCSGG	5 cut(s)	491, 492, 1284, 1285, 1461
BsaAI	YACGTR	1 cut(s)	1025
BsaHI	GRCGYC	1 cut(s)	496
BsaJI	CCNNGG	7 cut(s)	372, 409, 489, 490, 1283, 1284, 1508
BsaWI	WCCGGW	3 cut(s)	230, 757, 1134
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 1460, 1509, 1510
Bse118I	RCCGGY	1 cut(s)	230
Bse1I	ACTGG	3 cut(s)	241, 1066, 1810
Bse21I	CCTNAGG	1 cut(s)	294
BseBI	CCWGG	2 cut(s)	411, 1574
BseDI	CCNNGG	7 cut(s)	372, 409, 489, 490, 1283, 1284, 1508
BseGI	GGATG	3 cut(s)	150, 267, 1504
BseLI	CCNNNNNNNGG	4 cut(s)	22, 1460, 1509, 1510
BseMII	CTCAG	4 cut(s)	873, 1046, 1074, 1682
BseNI	ACTGG	3 cut(s)	241, 1066, 1810
BseRI	GAGGAG	2 cut(s)	441, 1109
BseSI	GKGCMC	2 cut(s)	537, 943
BseXI	GCAGC	2 cut(s)	1216, 1625
BshFI	GGCC	2 cut(s)	1072, 1577
BshNI	GGYRCC	1 cut(s)	259
BshTI	ACCGGT	1 cut(s)	230
BsiHKAI	GWGCWC	4 cut(s)	537, 943, 1534, 1632
BsiHKCI	CYCGRG	2 cut(s)	490, 1283
BsiSI	CCGG	6 cut(s)	231, 491, 758, 1135, 1284, 1461
BslFI	GGGAC	5 cut(s)	392, 507, 1114, 1195, 1266
BslI	CCNNNNNNNGG	4 cut(s)	22, 1460, 1509, 1510
BsmAI	GTCTC	4 cut(s)	816, 1079, 1597, 1746
BsmBI	CGTCTC	1 cut(s)	1746
BsmFI	GGGAC	5 cut(s)	392, 507, 1114, 1195, 1266
BsmI	GAATGC	2 cut(s)	576, 1588
BsnI	GGCC	2 cut(s)	1072, 1577
BsoBI	CYCGRG	2 cut(s)	490, 1283
Bsp1286I	GDGCHC	5 cut(s)	16, 537, 943, 1534, 1632
Bsp1407I	TGTACA	1 cut(s)	169
Bsp143I	GATC	4 cut(s)	301, 730, 754, 1169
Bsp19I	CCATGG	1 cut(s)	1508
BspACI	CCGC	4 cut(s)	72, 818, 836, 867
BspANI	GGCC	2 cut(s)	1072, 1577
BspCNI	CTCAG	4 cut(s)	874, 1047, 1075, 1683
BspLI	GGNNCC	4 cut(s)	261, 395, 822, 1183
BspMAI	CTGCAG	1 cut(s)	1527
BspOI	GCTAGC	1 cut(s)	60
BspPI	GGATC	1 cut(s)	749
BspQI	GCTCTTC	2 cut(s)	62, 1562
BspT107I	GGYRCC	1 cut(s)	259
BspTI	CTTAAG	1 cut(s)	1385
BsrBI	CCGCTC	1 cut(s)	72
BsrFI	RCCGGY	1 cut(s)	230
BsrGI	TGTACA	1 cut(s)	169
BsrI	ACTGG	3 cut(s)	241, 1066, 1810
BssAI	RCCGGY	1 cut(s)	230
BssECI	CCNNGG	7 cut(s)	372, 409, 489, 490, 1283, 1284, 1508
BssMI	GATC	4 cut(s)	301, 730, 754, 1169
BssNI	GRCGYC	1 cut(s)	496
BssT1I	CCWWGG	2 cut(s)	372, 1508
Bst2UI	CCWGG	2 cut(s)	411, 1574
Bst4CI	ACNGT	2 cut(s)	1280, 1704
Bst6I	CTCTTC	7 cut(s)	2, 62, 103, 1086, 1562, 1736, 1778
BstACI	GRCGYC	1 cut(s)	496
BstAFI	CTTAAG	1 cut(s)	1385
BstAUI	TGTACA	1 cut(s)	169
BstBAI	YACGTR	1 cut(s)	1025
BstC8I	GCNNGC	2 cut(s)	58, 1203
BstDEI	CTNAG	7 cut(s)	294, 743, 882, 923, 1055, 1083, 1691
BstDSI	CCRYGG	1 cut(s)	1508
BstF5I	GGATG	3 cut(s)	150, 267, 1504
BstKTI	GATC	4 cut(s)	304, 733, 757, 1172
BstMAI	GTCTC	4 cut(s)	816, 1079, 1597, 1746
BstMBI	GATC	4 cut(s)	301, 730, 754, 1169
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 62, 257, 643, 1583
BstNI	CCWGG	2 cut(s)	411, 1574
BstPAI	GACNNNNGTC	1 cut(s)	1758
BstSCI	CCNGG	7 cut(s)	409, 489, 490, 1282, 1283, 1459, 1572
BstSFI	CTRYAG	3 cut(s)	246, 1032, 1523
BstSLI	GKGCMC	2 cut(s)	537, 943
BstV1I	GCAGC	2 cut(s)	1216, 1625
BstV2I	GAAGAC	1 cut(s)	1003
BstX2I	RGATCY	1 cut(s)	1169
BstYI	RGATCY	1 cut(s)	1169
Bsu36I	CCTNAGG	1 cut(s)	294
BsuRI	GGCC	2 cut(s)	1072, 1577
BtgI	CCRYGG	1 cut(s)	1508
BtsCI	GGATG	3 cut(s)	150, 267, 1504
BtsIMutI	CAGTG	1 cut(s)	1073
Cac8I	GCNNGC	2 cut(s)	58, 1203
Cfr10I	RCCGGY	1 cut(s)	230
Cfr13I	GGNCC	2 cut(s)	1182, 1486
Cfr9I	CCCGGG	2 cut(s)	490, 1283
CseI	GACGC	1 cut(s)	504
Csp6I	GTAC	9 cut(s)	170, 212, 234, 911, 1218, 1423, 1439, 1803, 1818
CspAI	ACCGGT	1 cut(s)	230
CviAII	CATG	7 cut(s)	311, 854, 933, 1142, 1403, 1509, 1670
CviQI	GTAC	9 cut(s)	170, 212, 234, 911, 1218, 1423, 1439, 1803, 1818
DdeI	CTNAG	7 cut(s)	294, 743, 882, 923, 1055, 1083, 1691
DpnI	GATC	4 cut(s)	303, 732, 756, 1171
DpnII	GATC	4 cut(s)	301, 730, 754, 1169
DraI	TTTAAA	1 cut(s)	1189
EaeI	YGGCCR	2 cut(s)	1070, 1575
Eam1104I	CTCTTC	7 cut(s)	2, 62, 103, 1086, 1562, 1736, 1778
EarI	CTCTTC	7 cut(s)	2, 62, 103, 1086, 1562, 1736, 1778
Ecl136II	GAGCTC	2 cut(s)	1532, 1630
Eco130I	CCWWGG	2 cut(s)	372, 1508
Eco24I	GRGCYC	3 cut(s)	16, 1534, 1632
Eco32I	GATATC	1 cut(s)	920
Eco47I	GGWCC	2 cut(s)	1182, 1486
Eco53kI	GAGCTC	2 cut(s)	1532, 1630
Eco57I	CTGAAG	2 cut(s)	341, 1415
Eco72I	CACGTG	1 cut(s)	1025
Eco81I	CCTNAGG	1 cut(s)	294
Eco88I	CYCGRG	2 cut(s)	490, 1283
EcoICRI	GAGCTC	2 cut(s)	1532, 1630
EcoO109I	RGGNCCY	2 cut(s)	1182, 1486
EcoRI	GAATTC	2 cut(s)	1061, 1078
EcoRII	CCWGG	2 cut(s)	409, 1572
EcoRV	GATATC	1 cut(s)	920
EcoT14I	CCWWGG	2 cut(s)	372, 1508
EcoT22I	ATGCAT	1 cut(s)	1588
EcoT38I	GRGCYC	3 cut(s)	16, 1534, 1632
ErhI	CCWWGG	2 cut(s)	372, 1508
Esp3I	CGTCTC	1 cut(s)	1746
FaeI	CATG	7 cut(s)	314, 857, 936, 1145, 1406, 1512, 1673
FalI	AAGNNNNNCTT	6 cut(s)	677, 709, 976, 1008, 1646, 1678
FaqI	GGGAC	5 cut(s)	392, 507, 1114, 1195, 1266
FatI	CATG	7 cut(s)	310, 853, 932, 1141, 1402, 1508, 1669
Fnu4HI	GCNGC	3 cut(s)	819, 1230, 1614
FokI	GGATG	3 cut(s)	157, 254, 1491
FriOI	GRGCYC	3 cut(s)	16, 1534, 1632
Fsp4HI	GCNGC	3 cut(s)	819, 1230, 1614
FspBI	CTAG	5 cut(s)	57, 453, 626, 1233, 1496
GluI	GCNGC	3 cut(s)	819, 1230, 1614
HaeIII	GGCC	2 cut(s)	1072, 1577
HapII	CCGG	6 cut(s)	231, 491, 758, 1135, 1284, 1461
HgaI	GACGC	1 cut(s)	504
Hin1I	GRCGYC	1 cut(s)	496
Hin1II	CATG	7 cut(s)	314, 857, 936, 1145, 1406, 1512, 1673
HincII	GTYRAC	2 cut(s)	727, 859
HindII	GTYRAC	2 cut(s)	727, 859
HindIII	AAGCTT	3 cut(s)	620, 990, 1655
HinfI	GANTC	5 cut(s)	809, 827, 1476, 1499, 1538
HpaI	GTTAAC	2 cut(s)	727, 859
HpaII	CCGG	6 cut(s)	231, 491, 758, 1135, 1284, 1461
HphI	GGTGA	3 cut(s)	340, 1346, 1660
Hpy166II	GTNNAC	5 cut(s)	535, 727, 859, 941, 1820
Hpy188I	TCNGA	7 cut(s)	127, 684, 832, 883, 1056, 1084, 1692
Hpy188III	TCNNGA	9 cut(s)	206, 503, 581, 773, 824, 970, 1496, 1535, 1633
Hpy8I	GTNNAC	5 cut(s)	535, 727, 859, 941, 1820
HpyAV	CCTTC	4 cut(s)	103, 365, 509, 592
HpyCH4III	ACNGT	2 cut(s)	1280, 1704
HpyCH4IV	ACGT	3 cut(s)	1024, 1130, 1759
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 62, 257, 643, 1583
HpyF3I	CTNAG	7 cut(s)	294, 743, 882, 923, 1055, 1083, 1691
HpySE526I	ACGT	3 cut(s)	1024, 1130, 1759
Hsp92I	GRCGYC	1 cut(s)	496
Hsp92II	CATG	7 cut(s)	314, 857, 936, 1145, 1406, 1512, 1673
KspAI	GTTAAC	2 cut(s)	727, 859
Kzo9I	GATC	4 cut(s)	301, 730, 754, 1169
LguI	GCTCTTC	2 cut(s)	62, 1562
LmnI	GCTCC	5 cut(s)	163, 229, 826, 1153, 1390
Lsp1109I	GCAGC	2 cut(s)	1216, 1625
LweI	GCATC	5 cut(s)	43, 397, 823, 1018, 1418
MaeI	CTAG	5 cut(s)	57, 453, 626, 1233, 1496
MaeII	ACGT	3 cut(s)	1024, 1130, 1759
MaeIII	GTNAC	2 cut(s)	381, 1137
MalI	GATC	4 cut(s)	303, 732, 756, 1171
MbiI	CCGCTC	1 cut(s)	72
MboI	GATC	4 cut(s)	301, 730, 754, 1169
MflI	RGATCY	1 cut(s)	1169
MhlI	GDGCHC	5 cut(s)	16, 537, 943, 1534, 1632
MlsI	TGGCCA	2 cut(s)	1072, 1577
MluCI	AATT	9 cut(s)	183, 480, 584, 615, 785, 849, 1061, 1078, 1448
MluNI	TGGCCA	2 cut(s)	1072, 1577
MlyI	GAGTC	2 cut(s)	818, 821
MmeI	TCCRAC	1 cut(s)	251
MnlI	CCTC	8 cut(s)	275, 419, 877, 1087, 1090, 1153, 1229, 1437
Mox20I	TGGCCA	2 cut(s)	1072, 1577
Mph1103I	ATGCAT	1 cut(s)	1588
MscI	TGGCCA	2 cut(s)	1072, 1577
MseI	TTAA	7 cut(s)	219, 458, 618, 726, 858, 1188, 1386
Msp20I	TGGCCA	2 cut(s)	1072, 1577
MspA1I	CMGCKG	1 cut(s)	907
MspCI	CTTAAG	1 cut(s)	1385
MspI	CCGG	6 cut(s)	231, 491, 758, 1135, 1284, 1461
MspR9I	CCNGG	7 cut(s)	411, 491, 492, 1284, 1285, 1461, 1574
Mva1269I	GAATGC	2 cut(s)	576, 1588
MvaI	CCWGG	2 cut(s)	411, 1574
MwoI	GCNNNNNNNGC	5 cut(s)	53, 62, 257, 643, 1583
NciI	CCSGG	5 cut(s)	491, 492, 1284, 1285, 1461
NcoI	CCATGG	1 cut(s)	1508
NdeII	GATC	4 cut(s)	301, 730, 754, 1169
NheI	GCTAGC	1 cut(s)	56
NlaIII	CATG	7 cut(s)	314, 857, 936, 1145, 1406, 1512, 1673
NlaIV	GGNNCC	4 cut(s)	261, 395, 822, 1183
NmeAIII	GCCGAG	1 cut(s)	1579
NsiI	ATGCAT	1 cut(s)	1588
PciSI	GCTCTTC	2 cut(s)	62, 1562
PctI	GAATGC	2 cut(s)	576, 1588
PfeI	GAWTC	3 cut(s)	1476, 1499, 1538
PinAI	ACCGGT	1 cut(s)	230
PkrI	GCNGC	3 cut(s)	820, 1231, 1615
PleI	GAGTC	2 cut(s)	817, 821
PmaCI	CACGTG	1 cut(s)	1025
PmlI	CACGTG	1 cut(s)	1025
PpsI	GAGTC	2 cut(s)	817, 821
Ppu21I	YACGTR	1 cut(s)	1025
PpuMI	RGGWCCY	2 cut(s)	1182, 1486
PshAI	GACNNNNGTC	1 cut(s)	1758
Psp124BI	GAGCTC	2 cut(s)	1534, 1632
Psp1406I	AACGTT	1 cut(s)	1130
Psp5II	RGGWCCY	2 cut(s)	1182, 1486
Psp6I	CCWGG	2 cut(s)	409, 1572
PspCI	CACGTG	1 cut(s)	1025
PspGI	CCWGG	2 cut(s)	409, 1572
PspN4I	GGNNCC	4 cut(s)	261, 395, 822, 1183
PspPI	GGNCC	2 cut(s)	1182, 1486
PspPPI	RGGWCCY	2 cut(s)	1182, 1486
PstI	CTGCAG	1 cut(s)	1527
PsuI	RGATCY	1 cut(s)	1169
PvuII	CAGCTG	1 cut(s)	907
RsaI	GTAC	9 cut(s)	171, 213, 235, 912, 1219, 1424, 1440, 1804, 1819
RsaNI	GTAC	9 cut(s)	170, 212, 234, 911, 1218, 1423, 1439, 1803, 1818
SacI	GAGCTC	2 cut(s)	1534, 1632
SapI	GCTCTTC	2 cut(s)	62, 1562
SaqAI	TTAA	7 cut(s)	219, 458, 618, 726, 858, 1188, 1386
SatI	GCNGC	3 cut(s)	819, 1230, 1614
Sau3AI	GATC	4 cut(s)	301, 730, 754, 1169
Sau96I	GGNCC	2 cut(s)	1182, 1486
ScaI	AGTACT	1 cut(s)	1440
SchI	GAGTC	2 cut(s)	818, 821
ScrFI	CCNGG	7 cut(s)	411, 491, 492, 1284, 1285, 1461, 1574
SduI	GDGCHC	5 cut(s)	16, 537, 943, 1534, 1632
SfaNI	GCATC	5 cut(s)	43, 397, 823, 1018, 1418
SfcI	CTRYAG	3 cut(s)	246, 1032, 1523
SinI	GGWCC	2 cut(s)	1182, 1486
SmaI	CCCGGG	2 cut(s)	492, 1285
SmlI	CTYRAG	5 cut(s)	177, 968, 1118, 1385, 1631
SmoI	CTYRAG	5 cut(s)	177, 968, 1118, 1385, 1631
Sse9I	AATT	9 cut(s)	183, 480, 584, 615, 785, 849, 1061, 1078, 1448
SsiI	CCGC	4 cut(s)	72, 818, 836, 867
SspMI	CTAG	5 cut(s)	57, 453, 626, 1233, 1496
SstI	GAGCTC	2 cut(s)	1534, 1632
StyD4I	CCNGG	7 cut(s)	409, 489, 490, 1282, 1283, 1459, 1572
StyI	CCWWGG	2 cut(s)	372, 1508
TaaI	ACNGT	2 cut(s)	1280, 1704
TaiI	ACGT	3 cut(s)	1027, 1133, 1762
TaqI	TCGA	3 cut(s)	205, 582, 1019
TasI	AATT	9 cut(s)	183, 480, 584, 615, 785, 849, 1061, 1078, 1448
TatI	WGTACW	5 cut(s)	169, 211, 1217, 1438, 1817
TauI	GCSGC	1 cut(s)	821
TfiI	GAWTC	3 cut(s)	1476, 1499, 1538
Tru1I	TTAA	7 cut(s)	219, 458, 618, 726, 858, 1188, 1386
Tru9I	TTAA	7 cut(s)	219, 458, 618, 726, 858, 1188, 1386
TscAI	CASTG	1 cut(s)	1073
TseI	GCWGC	2 cut(s)	1229, 1613
TspDTI	ATGAA	9 cut(s)	20, 381, 516, 579, 842, 1031, 1448, 1580, 1754
TspMI	CCCGGG	2 cut(s)	490, 1283
TspRI	CASTG	1 cut(s)	1073
Vha464I	CTTAAG	1 cut(s)	1385
VneI	GTGCAC	2 cut(s)	533, 939
VpaK11BI	GGWCC	2 cut(s)	1182, 1486
XapI	RAATTY	3 cut(s)	1061, 1078, 1448
XbaI	TCTAGA	1 cut(s)	1495
XmaI	CCCGGG	2 cut(s)	490, 1283
XspI	CTAG	5 cut(s)	57, 453, 626, 1233, 1496
ZrmI	AGTACT	1 cut(s)	1440
Zsp2I	ATGCAT	1 cut(s)	1588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.