Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0012171

Physical Location & Seq

Genomic Coordinates Reverse (-)

7659443 .. 7662720

Gene Structure 3278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1096800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGTGCTTTATTAACAAGCGAATTCGAAGTTGGAACAAGGAAGAACAAGCAGAAGCAGAAGCAGAAGCAGCTCAAATGGTGGCCGCCAAGAGAAAACCGACCGAAACAGAGGAATCCGATATCTTCGCGCCTTGCTCTTTCTCCAGTATCGGACTTCACACACAATTATGCGAACAACTCGAAGAGAGGTTGGGCTTCAAAGCTCCGACTCTGGTCCAAGCTCAAGCCATCCCGGTCATCCTCTCCGGCCGCCACGTGCTCGTCAATGCGGCCACCGGCACGGGGAAGACCGTGGCGTATTTGGCTCCAGTCATCCACCACCTGCACTTGTACCAGCCTCGGATTCAGCGCTCCGACGGAACTTTCGCGCTGGTTCTTGTGCCCACGAGGGAGCTGTGTTTGCAGGTTCACGAGATTCTGCACAAGGTGCTGCACAGGTTTCATTGGATTGTTCCGGGTTATGTAATGGGGGGTGAAAACAGGTCTAAGGAGAAGGCCCGTCTGCGAAAAGGCATATCTATTCTTGTTGCAACTCCTGGACGGCTCTTGGATCACCTGAAGAATACTGCTTCTTTCGTGCACACGAATTTGCGTTGGATTATCTTCGATGAAGCAGATAGAATTTTGGAATTGGGATTTGGAAAAGAAATAGAGGAAATACTAGATCTTTTAGGCTCAAGGCAACATGGCTCTGCCGCTAAGAATGTCGCTGTTACAAGTAAATATGAGTTTCCGAGGCAGAATTTGCTATTATCAGCTACCTTAAATGAAAAAGTCAATCACCTTGCAAAAATGAGTTTAGAGAAACCTGTTATGATTGGCATGCCTGAGAAGAAGAGGCAGTCTATTGCATTGCATGAGCATTTAGGATCGGACGCGGATGATGATGACACACAAACAATGAACACAACAGGCTCTGTTAGTGAAGATTATAGACTTCCTGCTCAATTGACACAGAAATATGTAAAAGTACCATGTAATGCGCGGCTTGCTGTACTTCTTTCCATTCTAAAGTATCTTTTTGAGCGACAAACTTCCGAAAAGATTGTGCTATTCTTTTCAACATGTGATGCAGTGGATTTTCACTACTCCTTGTTAAGTGAGTTTCAATTCAAACCTTCTTCAGGACCAGATGCAGAACCTAAGCATAGGTTTGTTAATTGTAAGACCTTCCGGTTACATGGGAATATGGAGCAGGAGGACCGAAGAACTGCTTTTGAGACCTTCAAAAGAGAAAAATCGGCTCTTCTTTTGTCCACAGATGTTTGTGCTAGAGGTTTGGATTTCCCGAAAGTAAAATGTATTATACAATATGATTCTCCAGGCGAGGCTACTGAATATGTTCATAGGGTTGGAAGAACCGCTCGGCTGGGTGAACGAGGAGATTCATTGTTGTTTCTACAGCCAATTGAAATGGATTATTTGAAAGAGTTGGAGAAACATGGTGTTTCTCTAACAGAGTTTCCCCTCCTCAAAATATTAGATAGTTTTCCACTATATGGTCATAAGCATGTCAGGAAATTTGTTTCCATTGACGGACATCCCTGGGTTATGTCTTTGCAAAAGGCGCTCGAAGCATTTACCGATAAGCCGGATATGAAGATACTGGCCAAAAACGCATTTTGCTCGTGGGTTCGTGCATACACTGCCCACCGTGGTGAGCTGAAAAGAATATTTATGGTGAAGAAACTTCACTTGGGACATGTTGCGAAAAGCTTTGCATTGAAAGACCAGCCTTCCTTGGTCGGTAAGTCATTCCACAATCAAGAAAAAAAGAGGAAGAGGGACGAAAAGCATAAGGGATCATCGAGAAAGAGGAAGGTTTCGAGGAAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

613

Amino Acids

69.66

Weight (kDa)

9.38

Isoelectric Point (pI)

40.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	71 - 260	3.3e-41	DEAD/DEAH box helicase
ResIII	PF04851	73 - 220	1.5e-09	Type III restriction enzyme, res subunit
Helicase_C	PF00271	335 - 458	9.8e-24	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	531 - 580	3.5e-18	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40700
fragaria_vesca	FvH4_1g09140 FvH4_1g09140 FvH4_1g09140
malus_domestica	MD02G1096800.v1.1
prunus_persica	Prupe.7G194100_v2.0.a1
pyrus_communis	pycom02g07680 pycom15g19610
rosa_chinensis	RchiOBHm_Chr2g0095531
rosa_laevigata	RLG00000016576
rosa_multiflora	Rmu_co8308315.1_g000001 Rmu_co8333539.1_g000001
rosa_roxburghii	Rroxscaffold_2G00146220
rosa_rugosa	Rorug02G0052200
rosa_samantha	Rh2AG100000 Rh2BG101400 Rh2CG103600 Rh2DG100900
rosa_wichuraiana	Rw2G007590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	330
Acc36I	ACCTGC	2 cut(s)	330, 394
AccB7I	CCANNNNNTGG	1 cut(s)	1499
AccBSI	CCGCTC	1 cut(s)	1364
AccII	CGCG	4 cut(s)	128, 368, 878, 985
AciI	CCGC	7 cut(s)	84, 250, 269, 696, 878, 985, 1362
AclWI	GGATC	3 cut(s)	558, 877, 1810
AcoI	YGGCCR	4 cut(s)	81, 247, 270, 1608
AcsI	RAATTY	5 cut(s)	21, 586, 621, 742, 1520
AcuI	CTGAAG	2 cut(s)	578, 1107
AcvI	CACGTG	1 cut(s)	256
AdeI	CACNNNGTG	1 cut(s)	427
AfaI	GTAC	3 cut(s)	332, 972, 996
AfeI	AGCGCT	1 cut(s)	350
AfiI	CCNNNNNNNGG	3 cut(s)	282, 1124, 1499
AflIII	ACRYGT	2 cut(s)	1064, 1702
AgsI	TTSAA	8 cut(s)	199, 1062, 1109, 1114, 1228, 1412, 1426, 1726
AjnI	CCWGG	3 cut(s)	535, 1321, 1544
AjuI	GAANNNNNNNTTGG	6 cut(s)	13, 45, 621, 653, 1679, 1711
AleI	CACNNNNGTG	1 cut(s)	1656
AluBI	AGCT	7 cut(s)	71, 203, 221, 394, 758, 1663, 1716
AluI	AGCT	7 cut(s)	71, 203, 221, 394, 758, 1663, 1716
Alw21I	GWGCWC	2 cut(s)	261, 582
Alw26I	GTCTC	1 cut(s)	1214
Alw44I	GTGCAC	1 cut(s)	578
AlwI	GGATC	3 cut(s)	558, 877, 1810
AlwNI	CAGNNNCTG	1 cut(s)	917
Aor51HI	AGCGCT	1 cut(s)	350
AoxI	GGCC	5 cut(s)	81, 247, 270, 495, 1608
ApaLI	GTGCAC	1 cut(s)	578
ApeKI	GCWGC	2 cut(s)	68, 430
ApoI	RAATTY	5 cut(s)	21, 586, 621, 742, 1520
ArsI	GACNNNNNNTTYG	2 cut(s)	347, 379
Asp700I	GAANNNNTTC	1 cut(s)	1341
AspLEI	GCGC	5 cut(s)	130, 351, 370, 985, 1570
AspS9I	GGNCC	4 cut(s)	214, 496, 1127, 1201
AsuC2I	CCSGG	2 cut(s)	233, 456
AsuHPI	GGTGA	6 cut(s)	485, 545, 773, 1385, 1670, 1693
AsuII	TTCGAA	1 cut(s)	25
AvaII	GGWCC	3 cut(s)	214, 1127, 1201
BaeGI	GKGCMC	2 cut(s)	384, 582
BalI	TGGCCA	1 cut(s)	1610
BauI	CACGAG	3 cut(s)	385, 410, 1627
BbrPI	CACGTG	1 cut(s)	256
BbsI	GAAGAC	1 cut(s)	293
Bbv12I	GWGCWC	2 cut(s)	261, 582
BbvI	GCAGC	2 cut(s)	80, 417
BccI	CCATC	1 cut(s)	236
BceAI	ACGGC	1 cut(s)	557
BcgI	CGANNNNNNTGC	2 cut(s)	1608, 1642
BciT130I	CCWGG	3 cut(s)	537, 1323, 1546
BcnI	CCSGG	2 cut(s)	233, 456
BcoDI	GTCTC	1 cut(s)	1214
BfaI	CTAG	2 cut(s)	662, 1272
BfmI	CTRYAG	1 cut(s)	1400
BfoI	RGCGCY	2 cut(s)	352, 1571
BfuAI	ACCTGC	2 cut(s)	330, 394
BglII	AGATCT	1 cut(s)	664
BisI	GCNGC	7 cut(s)	69, 84, 250, 270, 431, 696, 986
BlsI	GCNGC	7 cut(s)	70, 85, 251, 271, 432, 697, 987
Bme1390I	CCNGG	5 cut(s)	233, 456, 537, 1323, 1546
Bme18I	GGWCC	3 cut(s)	214, 1127, 1201
BmgT120I	GGNCC	4 cut(s)	214, 496, 1127, 1201
BmiI	GGNNCC	1 cut(s)	306
BmrFI	CCNGG	5 cut(s)	233, 456, 537, 1323, 1546
BmsI	GCATC	2 cut(s)	1060, 1123
BoxI	GACNNNNGTC	1 cut(s)	212
BpiI	GAAGAC	1 cut(s)	293
BpmI	CTGGAG	3 cut(s)	127, 291, 1305
Bpu10I	CCTNAGC	1 cut(s)	1143
Bpu14I	TTCGAA	1 cut(s)	25
BpuEI	CTTGAG	2 cut(s)	207, 661
BpuMI	CCSGG	2 cut(s)	233, 456
BsaAI	YACGTR	1 cut(s)	256
BsaI	GGTCTC	1 cut(s)	1214
BsaJI	CCNNGG	7 cut(s)	291, 338, 734, 1544, 1545, 1654, 1740
BsaWI	WCCGGW	1 cut(s)	1173
Bsc4I	CCNNNNNNNGG	3 cut(s)	282, 1124, 1499
Bse118I	RCCGGY	1 cut(s)	275
Bse1I	ACTGG	3 cut(s)	144, 308, 1611
Bse3DI	GCAATG	1 cut(s)	851
BseBI	CCWGG	3 cut(s)	537, 1323, 1546
BseDI	CCNNGG	7 cut(s)	291, 338, 734, 1544, 1545, 1654, 1740
BseGI	GGATG	5 cut(s)	228, 237, 312, 886, 1540
BseLI	CCNNNNNNNGG	3 cut(s)	282, 1124, 1499
BseMI	GCAATG	1 cut(s)	851
BseMII	CTCAG	1 cut(s)	819
BseNI	ACTGG	3 cut(s)	144, 308, 1611
BseRI	GAGGAG	2 cut(s)	1395, 1460
BseSI	GKGCMC	2 cut(s)	384, 582
BseX3I	CGGCCG	1 cut(s)	247
BseXI	GCAGC	2 cut(s)	80, 417
BseYI	CCCAGC	1 cut(s)	1369
BsgI	GTGCAG	3 cut(s)	308, 404, 416
Bsh1236I	CGCG	4 cut(s)	128, 368, 878, 985
Bsh1285I	CGRYCG	2 cut(s)	102, 250
BshFI	GGCC	5 cut(s)	83, 249, 272, 497, 1610
BsiEI	CGRYCG	2 cut(s)	102, 250
BsiHKAI	GWGCWC	2 cut(s)	261, 582
BsiSI	CCGG	6 cut(s)	233, 246, 276, 455, 1174, 1592
BslFI	GGGAC	2 cut(s)	1713, 1799
BslI	CCNNNNNNNGG	3 cut(s)	282, 1124, 1499
BsmAI	GTCTC	1 cut(s)	1214
BsmFI	GGGAC	2 cut(s)	1713, 1799
BsnI	GGCC	5 cut(s)	83, 249, 272, 497, 1610
Bso31I	GGTCTC	1 cut(s)	1214
Bsp119I	TTCGAA	1 cut(s)	25
Bsp1286I	GDGCHC	3 cut(s)	261, 384, 582
Bsp143I	GATC	4 cut(s)	550, 664, 869, 1802
BspACI	CCGC	7 cut(s)	84, 250, 269, 696, 878, 985, 1362
BspANI	GGCC	5 cut(s)	83, 249, 272, 497, 1610
BspCNI	CTCAG	1 cut(s)	820
BspFNI	CGCG	4 cut(s)	128, 368, 878, 985
BspLI	GGNNCC	1 cut(s)	306
BspMI	ACCTGC	2 cut(s)	330, 394
BspPI	GGATC	3 cut(s)	558, 877, 1810
BspQI	GCTCTTC	1 cut(s)	1251
BspT104I	TTCGAA	1 cut(s)	25
BspTNI	GGTCTC	1 cut(s)	1214
BsrBI	CCGCTC	1 cut(s)	1364
BsrDI	GCAATG	1 cut(s)	851
BsrFI	RCCGGY	1 cut(s)	275
BsrI	ACTGG	3 cut(s)	144, 308, 1611
BssAI	RCCGGY	1 cut(s)	275
BssECI	CCNNGG	7 cut(s)	291, 338, 734, 1544, 1545, 1654, 1740
BssMI	GATC	4 cut(s)	550, 664, 869, 1802
BssSI	CACGAG	3 cut(s)	385, 410, 1627
BssT1I	CCWWGG	1 cut(s)	1740
Bst2BI	CACGAG	3 cut(s)	385, 410, 1627
Bst2UI	CCWGG	3 cut(s)	537, 1323, 1546
Bst4CI	ACNGT	2 cut(s)	292, 1655
Bst6I	CTCTTC	4 cut(s)	177, 830, 1251, 1775
BstAPI	GCANNNNNTGC	3 cut(s)	427, 745, 1646
BstBAI	YACGTR	1 cut(s)	256
BstBI	TTCGAA	1 cut(s)	25
BstC8I	GCNNGC	2 cut(s)	824, 990
BstDEI	CTNAG	4 cut(s)	486, 699, 828, 1143
BstDSI	CCRYGG	2 cut(s)	291, 1654
BstENI	CCTNNNNNAGG	1 cut(s)	1122
BstF5I	GGATG	5 cut(s)	228, 237, 312, 886, 1540
BstFNI	CGCG	4 cut(s)	128, 368, 878, 985
BstH2I	RGCGCY	2 cut(s)	352, 1571
BstHHI	GCGC	5 cut(s)	130, 351, 370, 985, 1570
BstKTI	GATC	4 cut(s)	553, 667, 872, 1805
BstMAI	GTCTC	1 cut(s)	1214
BstMBI	GATC	4 cut(s)	550, 664, 869, 1802
BstMCI	CGRYCG	2 cut(s)	102, 250
BstNI	CCWGG	3 cut(s)	537, 1323, 1546
BstNSI	RCATGY	4 cut(s)	826, 1068, 1514, 1706
BstPAI	GACNNNNGTC	1 cut(s)	212
BstSCI	CCNGG	5 cut(s)	231, 454, 535, 1321, 1544
BstSFI	CTRYAG	1 cut(s)	1400
BstSLI	GKGCMC	2 cut(s)	384, 582
BstUI	CGCG	4 cut(s)	128, 368, 878, 985
BstV1I	GCAGC	2 cut(s)	80, 417
BstV2I	GAAGAC	1 cut(s)	293
BstX2I	RGATCY	1 cut(s)	664
BstYI	RGATCY	1 cut(s)	664
BstZI	CGGCCG	1 cut(s)	247
BsuRI	GGCC	5 cut(s)	83, 249, 272, 497, 1610
BtgI	CCRYGG	2 cut(s)	291, 1654
BtsCI	GGATG	5 cut(s)	228, 237, 312, 886, 1540
BtsI	GCAGTG	2 cut(s)	1080, 1644
BtsIMutI	CAGTG	2 cut(s)	1080, 1644
BveI	ACCTGC	2 cut(s)	330, 394
Cac8I	GCNNGC	2 cut(s)	824, 990
CaiI	CAGNNNCTG	1 cut(s)	917
CfoI	GCGC	5 cut(s)	130, 351, 370, 985, 1570
Cfr10I	RCCGGY	1 cut(s)	275
Cfr13I	GGNCC	4 cut(s)	214, 496, 1127, 1201
CseI	GACGC	1 cut(s)	884
Csp6I	GTAC	3 cut(s)	331, 971, 995
CviQI	GTAC	3 cut(s)	331, 971, 995
DdeI	CTNAG	4 cut(s)	486, 699, 828, 1143
DpnI	GATC	4 cut(s)	552, 666, 871, 1804
DpnII	GATC	4 cut(s)	550, 664, 869, 1802
DraIII	CACNNNGTG	1 cut(s)	427
EaeI	YGGCCR	4 cut(s)	81, 247, 270, 1608
EagI	CGGCCG	1 cut(s)	247
Eam1104I	CTCTTC	4 cut(s)	177, 830, 1251, 1775
EarI	CTCTTC	4 cut(s)	177, 830, 1251, 1775
EclXI	CGGCCG	1 cut(s)	247
Eco130I	CCWWGG	1 cut(s)	1740
Eco31I	GGTCTC	1 cut(s)	1214
Eco32I	GATATC	1 cut(s)	121
Eco47I	GGWCC	3 cut(s)	214, 1127, 1201
Eco47III	AGCGCT	1 cut(s)	350
Eco52I	CGGCCG	1 cut(s)	247
Eco57I	CTGAAG	2 cut(s)	578, 1107
Eco72I	CACGTG	1 cut(s)	256
EcoNI	CCTNNNNNAGG	1 cut(s)	1122
EcoRI	GAATTC	1 cut(s)	21
EcoRII	CCWGG	3 cut(s)	535, 1321, 1544
EcoRV	GATATC	1 cut(s)	121
EcoT14I	CCWWGG	1 cut(s)	1740
ErhI	CCWWGG	1 cut(s)	1740
FalI	AAGNNNNNCTT	2 cut(s)	1198, 1230
FaqI	GGGAC	2 cut(s)	1713, 1799
Fnu4HI	GCNGC	7 cut(s)	69, 84, 250, 270, 431, 696, 986
FokI	GGATG	5 cut(s)	215, 224, 299, 893, 1527
Fsp4HI	GCNGC	7 cut(s)	69, 84, 250, 270, 431, 696, 986
FspBI	CTAG	2 cut(s)	662, 1272
GlaI	GCGC	5 cut(s)	129, 350, 369, 984, 1569
GluI	GCNGC	7 cut(s)	69, 84, 250, 270, 431, 696, 986
GsaI	CCCAGC	1 cut(s)	1373
GsuI	CTGGAG	3 cut(s)	127, 291, 1305
HaeII	RGCGCY	2 cut(s)	352, 1571
HaeIII	GGCC	5 cut(s)	83, 249, 272, 497, 1610
HapII	CCGG	6 cut(s)	233, 246, 276, 455, 1174, 1592
HgaI	GACGC	1 cut(s)	884
HhaI	GCGC	5 cut(s)	130, 351, 370, 985, 1570
Hin6I	GCGC	5 cut(s)	128, 349, 368, 983, 1568
HinP1I	GCGC	5 cut(s)	128, 349, 368, 983, 1568
HindIII	AAGCTT	1 cut(s)	1714
HinfI	GANTC	6 cut(s)	113, 208, 343, 415, 1316, 1385
HpaII	CCGG	6 cut(s)	233, 246, 276, 455, 1174, 1592
HphI	GGTGA	6 cut(s)	485, 545, 773, 1385, 1670, 1693
Hpy166II	GTNNAC	4 cut(s)	409, 580, 1257, 1376
Hpy188I	TCNGA	8 cut(s)	118, 152, 207, 342, 355, 735, 874, 1039
Hpy188III	TCNNGA	6 cut(s)	410, 1125, 1288, 1516, 1766, 1809
Hpy8I	GTNNAC	4 cut(s)	409, 580, 1257, 1376
Hpy99I	CGWCG	1 cut(s)	359
HpyAV	CCTTC	6 cut(s)	487, 1128, 1180, 1234, 1746, 1813
HpyCH4III	ACNGT	2 cut(s)	292, 1655
HpyCH4IV	ACGT	1 cut(s)	255
HpyF3I	CTNAG	4 cut(s)	486, 699, 828, 1143
HpySE526I	ACGT	1 cut(s)	255
HspAI	GCGC	5 cut(s)	128, 349, 368, 983, 1568
Kzo9I	GATC	4 cut(s)	550, 664, 869, 1802
LguI	GCTCTTC	1 cut(s)	1251
LmnI	GCTCC	5 cut(s)	208, 310, 356, 391, 1192
Lsp1109I	GCAGC	2 cut(s)	80, 417
LweI	GCATC	2 cut(s)	1060, 1123
MaeI	CTAG	2 cut(s)	662, 1272
MaeII	ACGT	1 cut(s)	255
MaeIII	GTNAC	2 cut(s)	712, 1176
MalI	GATC	4 cut(s)	552, 666, 871, 1804
MbiI	CCGCTC	1 cut(s)	1364
MboI	GATC	4 cut(s)	550, 664, 869, 1802
MfeI	CAATTG	2 cut(s)	947, 1407
MflI	RGATCY	1 cut(s)	664
MhlI	GDGCHC	3 cut(s)	261, 384, 582
MlsI	TGGCCA	1 cut(s)	1610
MluNI	TGGCCA	1 cut(s)	1610
MlyI	GAGTC	1 cut(s)	202
MmeI	TCCRAC	6 cut(s)	11, 230, 378, 575, 1333, 1413
Mox20I	TGGCCA	1 cut(s)	1610
MroXI	GAANNNNTTC	1 cut(s)	1341
MscI	TGGCCA	1 cut(s)	1610
MseI	TTAA	4 cut(s)	12, 764, 1097, 1158
MslI	CAYNNNNRTG	3 cut(s)	166, 1509, 1656
Msp20I	TGGCCA	1 cut(s)	1610
MspI	CCGG	6 cut(s)	233, 246, 276, 455, 1174, 1592
MspR9I	CCNGG	5 cut(s)	233, 456, 537, 1323, 1546
MunI	CAATTG	2 cut(s)	947, 1407
MvaI	CCWGG	3 cut(s)	537, 1323, 1546
MvnI	CGCG	4 cut(s)	128, 368, 878, 985
NciI	CCSGG	2 cut(s)	233, 456
NdeII	GATC	4 cut(s)	550, 664, 869, 1802
NlaIV	GGNNCC	1 cut(s)	306
NmeAIII	GCCGAG	1 cut(s)	1345
NspI	RCATGY	4 cut(s)	826, 1068, 1514, 1706
NspV	TTCGAA	1 cut(s)	25
OliI	CACNNNNGTG	1 cut(s)	1656
PaeI	GCATGC	1 cut(s)	826
PaqCI	CACCTGC	1 cut(s)	330
PasI	CCCWGGG	1 cut(s)	1545
PciI	ACATGT	2 cut(s)	1064, 1702
PciSI	GCTCTTC	1 cut(s)	1251
PdmI	GAANNNNTTC	1 cut(s)	1341
PfeI	GAWTC	5 cut(s)	113, 343, 415, 1316, 1385
PflMI	CCANNNNNTGG	1 cut(s)	1499
PfoI	TCCNGGA	1 cut(s)	535
PkrI	GCNGC	7 cut(s)	70, 85, 251, 271, 432, 697, 987
PleI	GAGTC	1 cut(s)	202
PmaCI	CACGTG	1 cut(s)	256
PmlI	CACGTG	1 cut(s)	256
PpsI	GAGTC	1 cut(s)	202
Ppu21I	YACGTR	1 cut(s)	256
PscI	ACATGT	2 cut(s)	1064, 1702
PshAI	GACNNNNGTC	1 cut(s)	212
Psp6I	CCWGG	3 cut(s)	535, 1321, 1544
PspCI	CACGTG	1 cut(s)	256
PspFI	CCCAGC	1 cut(s)	1369
PspGI	CCWGG	3 cut(s)	535, 1321, 1544
PspN4I	GGNNCC	1 cut(s)	306
PspPI	GGNCC	4 cut(s)	214, 496, 1127, 1201
PstNI	CAGNNNCTG	1 cut(s)	917
PsuI	RGATCY	1 cut(s)	664
RsaI	GTAC	3 cut(s)	332, 972, 996
RsaNI	GTAC	3 cut(s)	331, 971, 995
RseI	CAYNNNNRTG	3 cut(s)	166, 1509, 1656
SapI	GCTCTTC	1 cut(s)	1251
SaqAI	TTAA	4 cut(s)	12, 764, 1097, 1158
SatI	GCNGC	7 cut(s)	69, 84, 250, 270, 431, 696, 986
Sau3AI	GATC	4 cut(s)	550, 664, 869, 1802
Sau96I	GGNCC	4 cut(s)	214, 496, 1127, 1201
SchI	GAGTC	1 cut(s)	202
ScrFI	CCNGG	5 cut(s)	233, 456, 537, 1323, 1546
SduI	GDGCHC	3 cut(s)	261, 384, 582
SfaNI	GCATC	2 cut(s)	1060, 1123
SfcI	CTRYAG	1 cut(s)	1400
SfuI	TTCGAA	1 cut(s)	25
SinI	GGWCC	3 cut(s)	214, 1127, 1201
SmiMI	CAYNNNNRTG	3 cut(s)	166, 1509, 1656
SmlI	CTYRAG	2 cut(s)	222, 676
SmoI	CTYRAG	2 cut(s)	222, 676
SphI	GCATGC	1 cut(s)	826
SsiI	CCGC	7 cut(s)	84, 250, 269, 696, 878, 985, 1362
SspI	AATATT	2 cut(s)	1479, 1674
SspMI	CTAG	2 cut(s)	662, 1272
StyD4I	CCNGG	5 cut(s)	231, 454, 535, 1321, 1544
StyI	CCWWGG	1 cut(s)	1740
TaaI	ACNGT	2 cut(s)	292, 1655
TaiI	ACGT	1 cut(s)	258
TaqI	TCGA	6 cut(s)	25, 180, 606, 1572, 1808, 1826
TaqII	GACCGA	2 cut(s)	116, 1218
TatI	WGTACW	1 cut(s)	994
TauI	GCSGC	5 cut(s)	86, 252, 272, 698, 988
TfiI	GAWTC	5 cut(s)	113, 343, 415, 1316, 1385
Tru1I	TTAA	4 cut(s)	12, 764, 1097, 1158
Tru9I	TTAA	4 cut(s)	12, 764, 1097, 1158
TscAI	CASTG	2 cut(s)	1080, 1651
TseI	GCWGC	2 cut(s)	68, 430
TspDTI	ATGAA	7 cut(s)	431, 624, 783, 917, 1334, 1377, 1613
TspGWI	ACGGA	2 cut(s)	372, 1551
TspRI	CASTG	2 cut(s)	1080, 1651
Van91I	CCANNNNNTGG	1 cut(s)	1499
VneI	GTGCAC	1 cut(s)	578
VpaK11BI	GGWCC	3 cut(s)	214, 1127, 1201
XagI	CCTNNNNNAGG	1 cut(s)	1122
XapI	RAATTY	5 cut(s)	21, 586, 621, 742, 1520
XceI	RCATGY	4 cut(s)	826, 1068, 1514, 1706
XmnI	GAANNNNTTC	1 cut(s)	1341
XspI	CTAG	2 cut(s)	662, 1272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.