Protein kinase domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40730 |
| fragaria_vesca | FvH4_4g37220 FvH4_4g37220 FvH4_4g37220 FvH4_4g37220 |
| malus_domestica | MD00G1126900.v1.1 MD13G1002600.v1.1 |
| prunus_persica | Prupe.1G349800_v2.0.a1 |
| pyrus_communis | pycom13g00220 pycom16g00140 |
| rosa_chinensis | RchiOBHm_Chr4g0447001 |
| rosa_laevigata | RLG00000005613 |
| rosa_multiflora | Rmu_sc0001753.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00387330 |
| rosa_rugosa | Rorug04G0376900 Rorug04G0377000 |
| rosa_samantha | Rh4AG438500 Rh4BG447500 Rh4CG464600 Rh4DG446100 |
| rosa_wichuraiana | Rw4G037500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 63 |
| AarI | CACCTGC | 2 cut(s) | 1501, 2212 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2245 |
| Acc36I | ACCTGC | 4 cut(s) | 1501, 1933, 2212, 2350 |
| Acc65I | GGTACC | 1 cut(s) | 116 |
| AccB1I | GGYRCC | 3 cut(s) | 116, 1867, 2360 |
| AccI | GTMKAC | 1 cut(s) | 1215 |
| AciI | CCGC | 5 cut(s) | 332, 931, 1241, 1704, 2024 |
| AclWI | GGATC | 9 cut(s) | 40, 60, 68, 142, 1320, 1333, 2022, 2178, 2191 |
| AcoI | YGGCCR | 1 cut(s) | 2326 |
| AcsI | RAATTY | 1 cut(s) | 1013 |
| AcuI | CTGAAG | 4 cut(s) | 1098, 1634, 1797, 2091 |
| AdeI | CACNNNGTG | 1 cut(s) | 1874 |
| AfaI | GTAC | 9 cut(s) | 118, 223, 262, 386, 602, 1098, 1315, 1534, 2244 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1499 |
| AflII | CTTAAG | 2 cut(s) | 977, 1052 |
| AflIII | ACRYGT | 2 cut(s) | 1162, 1895 |
| AjnI | CCWGG | 1 cut(s) | 2264 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 229, 261, 1895, 1927 |
| AleI | CACNNNNGTG | 1 cut(s) | 111 |
| Alw26I | GTCTC | 2 cut(s) | 768, 2094 |
| AlwI | GGATC | 9 cut(s) | 40, 60, 68, 142, 1320, 1333, 2022, 2178, 2191 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1028, 1835 |
| Ama87I | CYCGRG | 4 cut(s) | 706, 963, 1400, 1497 |
| AoxI | GGCC | 3 cut(s) | 660, 1632, 2326 |
| ApoI | RAATTY | 1 cut(s) | 1013 |
| AseI | ATTAAT | 1 cut(s) | 1452 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 957, 1644 |
| Asp718I | GGTACC | 1 cut(s) | 116 |
| AspLEI | GCGC | 2 cut(s) | 216, 1795 |
| AspS9I | GGNCC | 2 cut(s) | 563, 660 |
| AsuHPI | GGTGA | 1 cut(s) | 83 |
| AvaI | CYCGRG | 4 cut(s) | 706, 963, 1400, 1497 |
| AvaII | GGWCC | 1 cut(s) | 563 |
| BaeGI | GKGCMC | 1 cut(s) | 2365 |
| BamHI | GGATCC | 2 cut(s) | 1325, 2183 |
| BanI | GGYRCC | 3 cut(s) | 116, 1867, 2360 |
| BanII | GRGCYC | 1 cut(s) | 713 |
| BbsI | GAAGAC | 3 cut(s) | 1682, 2172, 2265 |
| BbvCI | CCTCAGC | 1 cut(s) | 1714 |
| BccI | CCATC | 9 cut(s) | 125, 173, 275, 533, 1051, 1740, 1828, 1942, 1946 |
| BceAI | ACGGC | 1 cut(s) | 1619 |
| BciT130I | CCWGG | 1 cut(s) | 2266 |
| BciVI | GTATCC | 1 cut(s) | 1237 |
| BclI | TGATCA | 2 cut(s) | 1168, 1597 |
| BcoDI | GTCTC | 2 cut(s) | 768, 2094 |
| BfaI | CTAG | 7 cut(s) | 356, 587, 833, 1563, 1826, 2100, 2357 |
| BfmI | CTRYAG | 2 cut(s) | 1352, 2343 |
| BfoI | RGCGCY | 2 cut(s) | 217, 1796 |
| BfrI | CTTAAG | 2 cut(s) | 977, 1052 |
| BfuAI | ACCTGC | 4 cut(s) | 1501, 1933, 2212, 2350 |
| BfuI | GTATCC | 1 cut(s) | 1237 |
| BmcAI | AGTACT | 3 cut(s) | 262, 386, 1534 |
| Bme1390I | CCNGG | 1 cut(s) | 2266 |
| Bme18I | GGWCC | 1 cut(s) | 563 |
| BmeT110I | CYCGRG | 4 cut(s) | 706, 963, 1400, 1497 |
| BmgT120I | GGNCC | 2 cut(s) | 563, 660 |
| BmiI | GGNNCC | 8 cut(s) | 118, 1327, 1699, 1711, 1869, 2185, 2335, 2362 |
| BmrFI | CCNGG | 1 cut(s) | 2266 |
| BmrI | ACTGGG | 1 cut(s) | 404 |
| BmsI | GCATC | 3 cut(s) | 241, 1272, 1954 |
| BmuI | ACTGGG | 1 cut(s) | 404 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2086 |
| BpiI | GAAGAC | 3 cut(s) | 1682, 2172, 2265 |
| BpmI | CTGGAG | 3 cut(s) | 123, 1707, 2031 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1714 |
| BpuEI | CTTGAG | 4 cut(s) | 32, 159, 1754, 2107 |
| Bsa29I | ATCGAT | 1 cut(s) | 1280 |
| BsaBI | GATNNNNATC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 6 cut(s) | 123, 656, 962, 2264, 2265, 2329 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1499 |
| Bse1I | ACTGG | 6 cut(s) | 140, 399, 506, 1237, 1530, 1884 |
| Bse3DI | GCAATG | 3 cut(s) | 553, 1472, 2274 |
| Bse8I | GATNNNNATC | 1 cut(s) | 78 |
| BseBI | CCWGG | 1 cut(s) | 2266 |
| BseCI | ATCGAT | 1 cut(s) | 1280 |
| BseDI | CCNNGG | 6 cut(s) | 123, 656, 962, 2264, 2265, 2329 |
| BseGI | GGATG | 9 cut(s) | 133, 232, 385, 689, 1366, 1751, 1820, 1934, 2035 |
| BseJI | GATNNNNATC | 1 cut(s) | 78 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1499 |
| BseMI | GCAATG | 3 cut(s) | 553, 1472, 2274 |
| BseMII | CTCAG | 6 cut(s) | 255, 309, 1322, 1728, 1959, 2105 |
| BseNI | ACTGG | 6 cut(s) | 140, 399, 506, 1237, 1530, 1884 |
| BseRI | GAGGAG | 4 cut(s) | 746, 1722, 2187, 2346 |
| BseSI | GKGCMC | 1 cut(s) | 2365 |
| BsgI | GTGCAG | 2 cut(s) | 1524, 1911 |
| BshFI | GGCC | 3 cut(s) | 662, 1634, 2328 |
| BshNI | GGYRCC | 3 cut(s) | 116, 1867, 2360 |
| BshVI | ATCGAT | 1 cut(s) | 1280 |
| BsiHKCI | CYCGRG | 4 cut(s) | 706, 963, 1400, 1497 |
| BslFI | GGGAC | 3 cut(s) | 52, 57, 1444 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1499 |
| BsmAI | GTCTC | 2 cut(s) | 768, 2094 |
| BsmFI | GGGAC | 3 cut(s) | 52, 57, 1444 |
| BsmI | GAATGC | 1 cut(s) | 753 |
| BsnI | GGCC | 3 cut(s) | 662, 1634, 2328 |
| BsoBI | CYCGRG | 4 cut(s) | 706, 963, 1400, 1497 |
| Bsp1286I | GDGCHC | 2 cut(s) | 713, 2365 |
| Bsp19I | CCATGG | 1 cut(s) | 656 |
| BspACI | CCGC | 5 cut(s) | 332, 931, 1241, 1704, 2024 |
| BspANI | GGCC | 3 cut(s) | 662, 1634, 2328 |
| BspCNI | CTCAG | 6 cut(s) | 256, 310, 1321, 1727, 1960, 2104 |
| BspDI | ATCGAT | 1 cut(s) | 1280 |
| BspHI | TCATGA | 2 cut(s) | 277, 1990 |
| BspLI | GGNNCC | 8 cut(s) | 118, 1327, 1699, 1711, 1869, 2185, 2335, 2362 |
| BspMAI | CTGCAG | 1 cut(s) | 2347 |
| BspMI | ACCTGC | 4 cut(s) | 1501, 1933, 2212, 2350 |
| BspPI | GGATC | 9 cut(s) | 40, 60, 68, 142, 1320, 1333, 2022, 2178, 2191 |
| BspQI | GCTCTTC | 1 cut(s) | 1359 |
| BspT107I | GGYRCC | 3 cut(s) | 116, 1867, 2360 |
| BspTI | CTTAAG | 2 cut(s) | 977, 1052 |
| BsrDI | GCAATG | 3 cut(s) | 553, 1472, 2274 |
| BsrI | ACTGG | 6 cut(s) | 140, 399, 506, 1237, 1530, 1884 |
| BssECI | CCNNGG | 6 cut(s) | 123, 656, 962, 2264, 2265, 2329 |
| BssNAI | GTATAC | 1 cut(s) | 1216 |
| BssT1I | CCWWGG | 2 cut(s) | 123, 656 |
| Bst1107I | GTATAC | 1 cut(s) | 1216 |
| Bst2UI | CCWGG | 1 cut(s) | 2266 |
| Bst6I | CTCTTC | 2 cut(s) | 707, 1359 |
| BstAFI | CTTAAG | 2 cut(s) | 977, 1052 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1043, 1523, 1835 |
| BstC8I | GCNNGC | 4 cut(s) | 720, 1371, 1470, 1702 |
| BstDEI | CTNAG | 9 cut(s) | 264, 318, 714, 759, 791, 1308, 1714, 1968, 2091 |
| BstDSI | CCRYGG | 1 cut(s) | 656 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1497 |
| BstF5I | GGATG | 9 cut(s) | 133, 232, 385, 689, 1366, 1751, 1820, 1934, 2035 |
| BstH2I | RGCGCY | 2 cut(s) | 217, 1796 |
| BstHHI | GCGC | 2 cut(s) | 216, 1795 |
| BstMAI | GTCTC | 2 cut(s) | 768, 2094 |
| BstNI | CCWGG | 1 cut(s) | 2266 |
| BstNSI | RCATGY | 1 cut(s) | 1166 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2086 |
| BstSCI | CCNGG | 1 cut(s) | 2264 |
| BstSFI | CTRYAG | 2 cut(s) | 1352, 2343 |
| BstSLI | GKGCMC | 1 cut(s) | 2365 |
| BstV2I | GAAGAC | 3 cut(s) | 1682, 2172, 2265 |
| BstX2I | RGATCY | 6 cut(s) | 32, 52, 134, 1325, 2014, 2183 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 582 |
| BstYI | RGATCY | 6 cut(s) | 32, 52, 134, 1325, 2014, 2183 |
| BstZ17I | GTATAC | 1 cut(s) | 1216 |
| Bsu15I | ATCGAT | 1 cut(s) | 1280 |
| BsuI | GTATCC | 1 cut(s) | 1237 |
| BsuRI | GGCC | 3 cut(s) | 662, 1634, 2328 |
| BsuTUI | ATCGAT | 1 cut(s) | 1280 |
| BtgI | CCRYGG | 1 cut(s) | 656 |
| BtsCI | GGATG | 9 cut(s) | 133, 232, 385, 689, 1366, 1751, 1820, 1934, 2035 |
| BtsIMutI | CAGTG | 9 cut(s) | 315, 392, 744, 913, 1093, 1470, 1548, 1612, 2148 |
| BveI | ACCTGC | 4 cut(s) | 1501, 1933, 2212, 2350 |
| Cac8I | GCNNGC | 4 cut(s) | 720, 1371, 1470, 1702 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1028, 1835 |
| CciI | TCATGA | 2 cut(s) | 277, 1990 |
| CfoI | GCGC | 2 cut(s) | 216, 1795 |
| Cfr13I | GGNCC | 2 cut(s) | 563, 660 |
| ClaI | ATCGAT | 1 cut(s) | 1280 |
| CseI | GACGC | 1 cut(s) | 1827 |
| Csp6I | GTAC | 9 cut(s) | 117, 222, 261, 385, 601, 1097, 1314, 1533, 2243 |
| CviAII | CATG | 9 cut(s) | 99, 278, 455, 512, 657, 799, 1163, 1223, 1991 |
| CviQI | GTAC | 9 cut(s) | 117, 222, 261, 385, 601, 1097, 1314, 1533, 2243 |
| DdeI | CTNAG | 9 cut(s) | 264, 318, 714, 759, 791, 1308, 1714, 1968, 2091 |
| DraIII | CACNNNGTG | 1 cut(s) | 1874 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2245 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2245 |
| EaeI | YGGCCR | 1 cut(s) | 2326 |
| Eam1104I | CTCTTC | 2 cut(s) | 707, 1359 |
| EarI | CTCTTC | 2 cut(s) | 707, 1359 |
| Eco130I | CCWWGG | 2 cut(s) | 123, 656 |
| Eco24I | GRGCYC | 1 cut(s) | 713 |
| Eco47I | GGWCC | 1 cut(s) | 563 |
| Eco57I | CTGAAG | 4 cut(s) | 1098, 1634, 1797, 2091 |
| Eco88I | CYCGRG | 4 cut(s) | 706, 963, 1400, 1497 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1497 |
| EcoRII | CCWGG | 1 cut(s) | 2264 |
| EcoT14I | CCWWGG | 2 cut(s) | 123, 656 |
| EcoT38I | GRGCYC | 1 cut(s) | 713 |
| ErhI | CCWWGG | 2 cut(s) | 123, 656 |
| FaeI | CATG | 9 cut(s) | 102, 281, 458, 515, 660, 802, 1166, 1226, 1994 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1782, 1814 |
| FaqI | GGGAC | 3 cut(s) | 52, 57, 1444 |
| FatI | CATG | 9 cut(s) | 98, 277, 454, 511, 656, 798, 1162, 1222, 1990 |
| FauNDI | CATATG | 1 cut(s) | 577 |
| FbaI | TGATCA | 2 cut(s) | 1168, 1597 |
| FblI | GTMKAC | 1 cut(s) | 1215 |
| FokI | GGATG | 9 cut(s) | 140, 219, 392, 696, 1373, 1758, 1807, 1921, 2042 |
| FriOI | GRGCYC | 1 cut(s) | 713 |
| FspBI | CTAG | 7 cut(s) | 356, 587, 833, 1563, 1826, 2100, 2357 |
| GlaI | GCGC | 2 cut(s) | 215, 1794 |
| GsuI | CTGGAG | 3 cut(s) | 123, 1707, 2031 |
| HaeII | RGCGCY | 2 cut(s) | 217, 1796 |
| HaeIII | GGCC | 3 cut(s) | 662, 1634, 2328 |
| HgaI | GACGC | 1 cut(s) | 1827 |
| HhaI | GCGC | 2 cut(s) | 216, 1795 |
| Hin1II | CATG | 9 cut(s) | 102, 281, 458, 515, 660, 802, 1166, 1226, 1994 |
| Hin6I | GCGC | 2 cut(s) | 214, 1793 |
| HinP1I | GCGC | 2 cut(s) | 214, 1793 |
| HindIII | AAGCTT | 3 cut(s) | 983, 1115, 1301 |
| HinfI | GANTC | 8 cut(s) | 45, 103, 551, 668, 786, 1181, 1270, 1567 |
| HphI | GGTGA | 1 cut(s) | 83 |
| Hpy166II | GTNNAC | 4 cut(s) | 563, 868, 1216, 1316 |
| Hpy8I | GTNNAC | 4 cut(s) | 563, 868, 1216, 1316 |
| Hpy99I | CGWCG | 1 cut(s) | 1205 |
| HpyAV | CCTTC | 7 cut(s) | 93, 227, 813, 1421, 1979, 2052, 2115 |
| HpyCH4IV | ACGT | 2 cut(s) | 1897, 2229 |
| HpyF3I | CTNAG | 9 cut(s) | 264, 318, 714, 759, 791, 1308, 1714, 1968, 2091 |
| HpySE526I | ACGT | 2 cut(s) | 1897, 2229 |
| Hsp92II | CATG | 9 cut(s) | 102, 281, 458, 515, 660, 802, 1166, 1226, 1994 |
| HspAI | GCGC | 2 cut(s) | 214, 1793 |
| KpnI | GGTACC | 1 cut(s) | 120 |
| Ksp22I | TGATCA | 2 cut(s) | 1168, 1597 |
| LguI | GCTCTTC | 1 cut(s) | 1359 |
| LmnI | GCTCC | 9 cut(s) | 352, 543, 1036, 1300, 1697, 1709, 2200, 2287, 2333 |
| LweI | GCATC | 3 cut(s) | 241, 1272, 1954 |
| MaeI | CTAG | 7 cut(s) | 356, 587, 833, 1563, 1826, 2100, 2357 |
| MaeII | ACGT | 2 cut(s) | 1897, 2229 |
| MaeIII | GTNAC | 6 cut(s) | 104, 298, 313, 484, 740, 1997 |
| MfeI | CAATTG | 1 cut(s) | 1107 |
| MflI | RGATCY | 6 cut(s) | 32, 52, 134, 1325, 2014, 2183 |
| MhlI | GDGCHC | 2 cut(s) | 713, 2365 |
| MluCI | AATT | 3 cut(s) | 1013, 1107, 1172 |
| MlyI | GAGTC | 4 cut(s) | 39, 112, 780, 1264 |
| MmeI | TCCRAC | 1 cut(s) | 1926 |
| MroXI | GAANNNNTTC | 2 cut(s) | 957, 1644 |
| MseI | TTAA | 9 cut(s) | 6, 14, 978, 1040, 1053, 1275, 1452, 2352, 2373 |
| MslI | CAYNNNNRTG | 4 cut(s) | 111, 459, 580, 1995 |
| MspA1I | CMGCKG | 7 cut(s) | 334, 1025, 1704, 1832, 2026, 2111, 2153 |
| MspCI | CTTAAG | 2 cut(s) | 977, 1052 |
| MspR9I | CCNGG | 1 cut(s) | 2266 |
| MunI | CAATTG | 1 cut(s) | 1107 |
| Mva1269I | GAATGC | 1 cut(s) | 753 |
| MvaI | CCWGG | 1 cut(s) | 2266 |
| NcoI | CCATGG | 1 cut(s) | 656 |
| NdeI | CATATG | 1 cut(s) | 577 |
| NlaIII | CATG | 9 cut(s) | 102, 281, 458, 515, 660, 802, 1166, 1226, 1994 |
| NlaIV | GGNNCC | 8 cut(s) | 118, 1327, 1699, 1711, 1869, 2185, 2335, 2362 |
| NmeAIII | GCCGAG | 1 cut(s) | 2354 |
| NmuCI | GTSAC | 3 cut(s) | 104, 313, 1997 |
| NspI | RCATGY | 1 cut(s) | 1166 |
| OliI | CACNNNNGTG | 1 cut(s) | 111 |
| PaeR7I | CTCGAG | 1 cut(s) | 1497 |
| PagI | TCATGA | 2 cut(s) | 277, 1990 |
| PaqCI | CACCTGC | 2 cut(s) | 1501, 2212 |
| PasI | CCCWGGG | 1 cut(s) | 2265 |
| PciI | ACATGT | 1 cut(s) | 1162 |
| PciSI | GCTCTTC | 1 cut(s) | 1359 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1868, 2374 |
| PctI | GAATGC | 1 cut(s) | 753 |
| PdmI | GAANNNNTTC | 2 cut(s) | 957, 1644 |
| PfeI | GAWTC | 4 cut(s) | 551, 668, 1181, 1567 |
| PflFI | GACNNNGTC | 1 cut(s) | 908 |
| PleI | GAGTC | 4 cut(s) | 39, 111, 780, 1264 |
| PpsI | GAGTC | 4 cut(s) | 39, 111, 780, 1264 |
| PscI | ACATGT | 1 cut(s) | 1162 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2086 |
| PshBI | ATTAAT | 1 cut(s) | 1452 |
| PsiI | TTATAA | 1 cut(s) | 63 |
| Psp6I | CCWGG | 1 cut(s) | 2264 |
| PspGI | CCWGG | 1 cut(s) | 2264 |
| PspN4I | GGNNCC | 8 cut(s) | 118, 1327, 1699, 1711, 1869, 2185, 2335, 2362 |
| PspPI | GGNCC | 2 cut(s) | 563, 660 |
| PspXI | VCTCGAGB | 1 cut(s) | 1497 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1372, 1404 |
| PstI | CTGCAG | 1 cut(s) | 2347 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1028, 1835 |
| PsuI | RGATCY | 6 cut(s) | 32, 52, 134, 1325, 2014, 2183 |
| PsyI | GACNNNGTC | 1 cut(s) | 908 |
| PvuII | CAGCTG | 4 cut(s) | 1025, 1832, 2111, 2153 |
| RsaI | GTAC | 9 cut(s) | 118, 223, 262, 386, 602, 1098, 1315, 1534, 2244 |
| RsaNI | GTAC | 9 cut(s) | 117, 222, 261, 385, 601, 1097, 1314, 1533, 2243 |
| RseI | CAYNNNNRTG | 4 cut(s) | 111, 459, 580, 1995 |
| SapI | GCTCTTC | 1 cut(s) | 1359 |
| SaqAI | TTAA | 9 cut(s) | 6, 14, 978, 1040, 1053, 1275, 1452, 2352, 2373 |
| Sau96I | GGNCC | 2 cut(s) | 563, 660 |
| ScaI | AGTACT | 3 cut(s) | 262, 386, 1534 |
| SchI | GAGTC | 4 cut(s) | 39, 112, 780, 1264 |
| ScrFI | CCNGG | 1 cut(s) | 2266 |
| SduI | GDGCHC | 2 cut(s) | 713, 2365 |
| SfaNI | GCATC | 3 cut(s) | 241, 1272, 1954 |
| SfcI | CTRYAG | 2 cut(s) | 1352, 2343 |
| Sfr274I | CTCGAG | 1 cut(s) | 1497 |
| SinI | GGWCC | 1 cut(s) | 563 |
| SlaI | CTCGAG | 1 cut(s) | 1497 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 111, 459, 580, 1995 |
| SmlI | CTYRAG | 7 cut(s) | 47, 174, 977, 1052, 1497, 1769, 2122 |
| SmoI | CTYRAG | 7 cut(s) | 47, 174, 977, 1052, 1497, 1769, 2122 |
| Sse9I | AATT | 3 cut(s) | 1013, 1107, 1172 |
| SsiI | CCGC | 5 cut(s) | 332, 931, 1241, 1704, 2024 |
| SspI | AATATT | 2 cut(s) | 150, 241 |
| SspMI | CTAG | 7 cut(s) | 356, 587, 833, 1563, 1826, 2100, 2357 |
| StyD4I | CCNGG | 1 cut(s) | 2264 |
| StyI | CCWWGG | 2 cut(s) | 123, 656 |
| TaiI | ACGT | 2 cut(s) | 1900, 2232 |
| TaqI | TCGA | 7 cut(s) | 270, 912, 1135, 1203, 1280, 1498, 2019 |
| TaqII | GACCGA | 1 cut(s) | 1605 |
| TasI | AATT | 3 cut(s) | 1013, 1107, 1172 |
| TatI | WGTACW | 5 cut(s) | 260, 384, 600, 1532, 2242 |
| TauI | GCSGC | 1 cut(s) | 334 |
| TfiI | GAWTC | 4 cut(s) | 551, 668, 1181, 1567 |
| Tru1I | TTAA | 9 cut(s) | 6, 14, 978, 1040, 1053, 1275, 1452, 2352, 2373 |
| Tru9I | TTAA | 9 cut(s) | 6, 14, 978, 1040, 1053, 1275, 1452, 2352, 2373 |
| TscAI | CASTG | 9 cut(s) | 322, 399, 751, 913, 1093, 1470, 1555, 1612, 2148 |
| TseFI | GTSAC | 3 cut(s) | 104, 313, 1997 |
| Tsp45I | GTSAC | 3 cut(s) | 104, 313, 1997 |
| TspGWI | ACGGA | 2 cut(s) | 1877, 2177 |
| TspRI | CASTG | 9 cut(s) | 322, 399, 751, 913, 1093, 1470, 1555, 1612, 2148 |
| Tth111I | GACNNNGTC | 1 cut(s) | 908 |
| Vha464I | CTTAAG | 2 cut(s) | 977, 1052 |
| VpaK11BI | GGWCC | 1 cut(s) | 563 |
| VspI | ATTAAT | 1 cut(s) | 1452 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1497 |
| XapI | RAATTY | 1 cut(s) | 1013 |
| XbaI | TCTAGA | 2 cut(s) | 832, 2099 |
| XceI | RCATGY | 1 cut(s) | 1166 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 880, 1354 |
| XhoI | CTCGAG | 1 cut(s) | 1497 |
| XmiI | GTMKAC | 1 cut(s) | 1215 |
| XmnI | GAANNNNTTC | 2 cut(s) | 957, 1644 |
| XspI | CTAG | 7 cut(s) | 356, 587, 833, 1563, 1826, 2100, 2357 |
| ZrmI | AGTACT | 3 cut(s) | 262, 386, 1534 |