Rroxscaffold_5G00387330
NAC Family

inactive serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0010351
Physical Location & Seq
Reverse (-)
66017928 .. 66025725
7798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00387330.1

Sequence Viewer

Length: 2397 bp
ATGTTGAAATTCTTGAATCGAGTGGTGGGTGGATCTGGGAGCGGACCCAAAGATCTGCCATACAACATCGGCGAGCCCTATCCCTCTGCTTGGGGCTCTTGGACTCACTTCAGGGGCACCTCCAAGGACGATGGGTCTCCGGTGTCCATATTTTCCATTAGTGCAAGTAATGCTCAGGATGGCCATTTGGCCGCCGCTCGCAATGGCGTCAAGCGTCTCCGTACTGTCAGACATCCCAACATCTTATCATTTCTCCACAGTACTGAAACCGAAACCATGGATGCTTCTACCACCAAGCACACTATCTACATTGTCACCGAGCCTGTTATGCCACTCTCTGAGAAGATCAAAGAACTCAGTTTACAAAACATCCAAAGGGATGAATATTACGCTTGGGGCCTGCACCAGATTGCTAAAGCTGTTAGTTTCTTAAATAATGATTGTAAACTGGTTCATGCCAATGTTTGTGTTGCCAGTGTGGTTGTAACTCAAACGTTGGACTGGAAGCTGCATGCTTTTGATGTTCTTTCCGAGTTTGATGGCAGCAATGAGGCTTCTGCTGGACCAATGCTGCAATATGCCTGGCTTGTTGGATCACAATACAAACCTGTGGAGTTGTTGAAGTCTGATTGGGCGGCAGTCAGAAAGTCTCCACCATGGGCCATTGATTCTTGGGGCTTGGGCTGTCTTATCTACGAGCTCTTCTCTGGTCTGAAGTTAAGCAAAACAGAGGAGCTGCGAAACACTGCTTCTATTCCAAAGTCTCTGCTTCCAGATTATCAGCGGCTCCTGAGTGCCATGCCTTCTCGTAGGTTGAATACGTCGAAGCTTATAGAAAACAGTGCCTATTTTCAAAATAAGTTGGTGGATACAATACACTTCATGGAAATTCTAAATTTGAAGGATAGTGTTGAGAAAGATACTTTCTTCCGCAAGCTTCCGAATTTGGCAGAGCAGCTACCTCGTCAAATTGTGCTGAAAAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCACCTGCTTTGACTGCATTGTTAAAAATGGGTTCTTGGCTTTCAACTGAAGAATTTAGTGTGAAGGTGCTTCCAACCATTGTGAAACTGTTTGCTTCCAATGACCGAGCTATTCGAGTTGGTCTTTTGCAACATGTTGATCAGTTTGGAGAATCATTATCAGCACAAATTGTTGATGAGCAAGTTTATCCCCACGTTGCTACCGGTTTCTCTGATACATCTGCTTTTCTTCGGGAACTGACTCTAAAATCGATGCTCGTTCTCGCTCCCAAGCTTTCTCAACGTACCATTTCAGGGTCGTTGTTGAAGTATCTTTCAAAGTTACAGGTTGATGAAGAACCTGCAATTAGAACAAATACTACTATATTATTAGGGAACATTGCAAGCCACCTGAATGAAGGGACAAGGAAAAGAGTTTTGATTAATGCATTTACTGTTCGTGCATTACGGGATAGTTTCTCACCTGCCCGAGGAGCAGGGATTATGGCTTTATGTGCAACCAGCTCTTATTATGACATCACTGAGATTTCAACTAGGATCCTCCCAAATGTTGTTGTTCTAATCATTGACCCTGACAATGATGTTCGATCGAAGGCATTTCAAGCAGTTGATCAGTTTCTACAGATAGTGAAGCAAACCTATGAGAAGACAAATTCAGGAGATGCTGCTGGGGCAGCAGGTGACGGAATGTCATCAATGCCAGGAAATGCTAGTTTACTGGGATGGGCAATGAGCTCCTTAACTCTCAAGGGTAAACCAGCTGAACAAGCTCCTCTTGCACTTGTCAATACCAGTGCATCTCTTACTAAAACGACTTCCAATGACAGCTCAGCGATGGATACTCCAACCACAGCACCTGCCCATGTAAGTTCGACAACAGATTTCCCAGATCAACATGTACCCGAGTCCCCTACGTCCACAGATGGCTGGGGAGAGCTAGAAAATGGAATACAGGAAGAGCATGAAAGTGATAAGGATGGTTGGGATGATATTGAACCCCTTGAAGAGCCAACACCACCTCCAGCTCTTGCTAACATTCAAGCTGCTCAGAAGCGGCCGGTCTCGCAATCGCAGCCAAAGCAAGCAGCAAGTTTGCGACCCAAAAACATGGCCAAAGTTATCAAAGATGAAGATGATGATTTGTGGGGCTCCATTGCCGCCCCAGCACCCAAAACAAGTTCAAAGGCTTTGAATTTGAAAACAAGTCAATCAGTTGATGATGATGATGATCCATGGGCTGCAATCGCCGCGCCCCTACCTACTACTAAGGCAAGACCCTTAGCAGCTGGCAGAGGCCGAGGGGCTAAACCCGCTGCTCCAAAATTGGGTGCACAGAGGATAAATCGGACTTCTTCGTCTGGGGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005813 GO:0005815 GO:0005856 GO:0015630 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

798

Amino Acids

86.72

Weight (kDa)

6.46

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 37 - 245 4.1e-10 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010351)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G40730
fragaria_vesca FvH4_4g37220 FvH4_4g37220 FvH4_4g37220 FvH4_4g37220
malus_domestica MD00G1126900.v1.1 MD13G1002600.v1.1
prunus_persica Prupe.1G349800_v2.0.a1
pyrus_communis pycom13g00220 pycom16g00140
rosa_chinensis RchiOBHm_Chr4g0447001
rosa_laevigata RLG00000005613
rosa_multiflora Rmu_sc0001753.1_g000002
rosa_roxburghii Rroxscaffold_5G00387330
rosa_rugosa Rorug04G0376900 Rorug04G0377000
rosa_samantha Rh4AG438500 Rh4BG447500 Rh4CG464600 Rh4DG446100
rosa_wichuraiana Rw4G037500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 1042, 1501, 1697, 1894
AasI GACNNNNNNGTC 1 cut(s) 2383
Acc36I ACCTGC 5 cut(s) 1042, 1378, 1501, 1697, 1894
AccB1I GGYRCC 1 cut(s) 116
AccBSI CCGCTC 2 cut(s) 42, 197
AccII CGCG 1 cut(s) 2279
AclI AACGTT 1 cut(s) 494
AclWI GGATC 5 cut(s) 40, 601, 1561, 1574, 2252
AcoI YGGCCR 4 cut(s) 181, 189, 2084, 2139
AcsI RAATTY 8 cut(s) 8, 888, 895, 943, 1013, 1082, 1681, 2221
AcuI CTGAAG 3 cut(s) 94, 734, 1098
AcyI GRCGYC 1 cut(s) 207
AfaI GTAC 4 cut(s) 223, 262, 1315, 1929
AfiI CCNNNNNNNGG 4 cut(s) 90, 1323, 1499, 2354
AflIII ACRYGT 2 cut(s) 1162, 1924
AgeI ACCGGT 1 cut(s) 1232
AhdI GACNNNNNGTC 2 cut(s) 133, 1717
AjnI CCWGG 2 cut(s) 581, 1729
Alw21I GWGCWC 3 cut(s) 702, 1766, 2362
Alw26I GTCTC 5 cut(s) 141, 221, 654, 768, 2095
Alw44I GTGCAC 1 cut(s) 2358
AlwI GGATC 5 cut(s) 40, 601, 1561, 1574, 2252
AlwNI CAGNNNCTG 2 cut(s) 1028, 1886
Ama87I CYCGRG 2 cut(s) 1497, 1931
AoxI GGCC 7 cut(s) 181, 189, 397, 660, 2084, 2139, 2323
ApaLI GTGCAC 1 cut(s) 2358
ApoI RAATTY 8 cut(s) 8, 888, 895, 943, 1013, 1082, 1681, 2221
AseI ATTAAT 1 cut(s) 1452
AsiGI ACCGGT 1 cut(s) 1232
AspLEI GCGC 1 cut(s) 2281
AspS9I GGNCC 4 cut(s) 44, 397, 563, 660
AsuHPI GGTGA 3 cut(s) 307, 1482, 1721
AvaI CYCGRG 2 cut(s) 1497, 1931
AvaII GGWCC 2 cut(s) 44, 563
BaeGI GKGCMC 2 cut(s) 119, 2362
BalI TGGCCA 2 cut(s) 183, 2141
BamHI GGATCC 1 cut(s) 1566
BanI GGYRCC 1 cut(s) 116
BanII GRGCYC 5 cut(s) 78, 98, 702, 1766, 2180
BbsI GAAGAC 1 cut(s) 1682
Bbv12I GWGCWC 3 cut(s) 702, 1766, 2362
BccI CCATC 7 cut(s) 125, 173, 533, 1746, 1858, 1946, 2000
BcgI CGANNNNNNTGC 2 cut(s) 944, 978
BciT130I CCWGG 2 cut(s) 583, 1731
BciVI GTATCC 2 cut(s) 862, 1861
BclI TGATCA 2 cut(s) 1168, 1639
BcoDI GTCTC 5 cut(s) 141, 221, 654, 768, 2095
BfaI CTAG 3 cut(s) 1563, 1740, 1967
BfmI CTRYAG 1 cut(s) 1649
BfuAI ACCTGC 5 cut(s) 1042, 1378, 1501, 1697, 1894
BfuI GTATCC 2 cut(s) 862, 1861
BglII AGATCT 1 cut(s) 52
BlpI GCTNAGC 1 cut(s) 1858
BmcAI AGTACT 1 cut(s) 262
Bme1390I CCNGG 2 cut(s) 583, 1731
Bme18I GGWCC 2 cut(s) 44, 563
BmeRI GACNNNNNGTC 2 cut(s) 133, 1717
BmeT110I CYCGRG 2 cut(s) 1497, 1931
BmgT120I GGNCC 4 cut(s) 44, 397, 563, 660
BmiI GGNNCC 6 cut(s) 46, 118, 398, 788, 1568, 2179
BmrFI CCNGG 2 cut(s) 583, 1731
BmrI ACTGGG 1 cut(s) 1757
BmsI GCATC 4 cut(s) 271, 1272, 1681, 1835
BmuI ACTGGG 1 cut(s) 1757
BpiI GAAGAC 1 cut(s) 1682
BplI GAGNNNNNCTC 2 cut(s) 689, 721
BpmI CTGGAG 1 cut(s) 2034
Bpu10I CCTNAGC 2 cut(s) 174, 2308
Bpu1102I GCTNAGC 1 cut(s) 1858
BpuEI CTTGAG 1 cut(s) 1760
Bsa29I ATCGAT 1 cut(s) 1280
BsaBI GATNNNNATC 1 cut(s) 2256
BsaHI GRCGYC 1 cut(s) 207
BsaI GGTCTC 2 cut(s) 141, 2095
BsaJI CCNNGG 6 cut(s) 123, 276, 656, 1498, 2261, 2326
BsaWI WCCGGW 2 cut(s) 139, 1232
BsaXI ACNNNNNCTCC 2 cut(s) 2032, 2062
Bsc4I CCNNNNNNNGG 4 cut(s) 90, 1323, 1499, 2354
Bse118I RCCGGY 2 cut(s) 1232, 2086
Bse1I ACTGG 5 cut(s) 453, 474, 506, 1752, 1821
Bse3DI GCAATG 5 cut(s) 208, 553, 1407, 1764, 2181
Bse8I GATNNNNATC 1 cut(s) 2256
BseBI CCWGG 2 cut(s) 583, 1731
BseCI ATCGAT 1 cut(s) 1280
BseDI CCNNGG 6 cut(s) 123, 276, 656, 1498, 2261, 2326
BseGI GGATG 8 cut(s) 184, 232, 286, 369, 385, 1757, 2011, 2020
BseJI GATNNNNATC 1 cut(s) 2256
BseLI CCNNNNNNNGG 4 cut(s) 90, 1323, 1499, 2354
BseMI GCAATG 5 cut(s) 208, 553, 1407, 1764, 2181
BseMII CTCAG 7 cut(s) 188, 330, 370, 782, 1542, 1872, 2090
BseNI ACTGG 5 cut(s) 453, 474, 506, 1752, 1821
BseRI GAGGAG 3 cut(s) 746, 1515, 1791
BseSI GKGCMC 2 cut(s) 119, 2362
BseX3I CGGCCG 1 cut(s) 2084
BseYI CCCAGC 3 cut(s) 1697, 1956, 2191
BsgI GTGCAG 2 cut(s) 386, 1014
Bsh1236I CGCG 1 cut(s) 2279
Bsh1285I CGRYCG 2 cut(s) 1619, 2087
BshFI GGCC 7 cut(s) 183, 191, 399, 662, 2086, 2141, 2325
BshNI GGYRCC 1 cut(s) 116
BshTI ACCGGT 1 cut(s) 1232
BshVI ATCGAT 1 cut(s) 1280
BsiEI CGRYCG 2 cut(s) 1619, 2087
BsiHKAI GWGCWC 3 cut(s) 702, 1766, 2362
BsiHKCI CYCGRG 2 cut(s) 1497, 1931
BsiSI CCGG 3 cut(s) 140, 1233, 2087
BslFI GGGAC 2 cut(s) 1444, 1921
BslI CCNNNNNNNGG 4 cut(s) 90, 1323, 1499, 2354
BsmAI GTCTC 5 cut(s) 141, 221, 654, 768, 2095
BsmBI CGTCTC 1 cut(s) 221
BsmFI GGGAC 2 cut(s) 1444, 1921
BsnI GGCC 7 cut(s) 183, 191, 399, 662, 2086, 2141, 2325
Bso31I GGTCTC 2 cut(s) 141, 2095
BsoBI CYCGRG 2 cut(s) 1497, 1931
Bsp1286I GDGCHC 7 cut(s) 78, 98, 119, 702, 1766, 2180, 2362
Bsp1720I GCTNAGC 1 cut(s) 1858
Bsp19I CCATGG 3 cut(s) 276, 656, 2261
BspANI GGCC 7 cut(s) 183, 191, 399, 662, 2086, 2141, 2325
BspCNI CTCAG 7 cut(s) 187, 331, 369, 783, 1543, 1871, 2089
BspDI ATCGAT 1 cut(s) 1280
BspFNI CGCG 1 cut(s) 2279
BspLI GGNNCC 6 cut(s) 46, 118, 398, 788, 1568, 2179
BspMI ACCTGC 5 cut(s) 1042, 1378, 1501, 1697, 1894
BspPI GGATC 5 cut(s) 40, 601, 1561, 1574, 2252
BspQI GCTCTTC 3 cut(s) 707, 1980, 2028
BspT107I GGYRCC 1 cut(s) 116
BspTNI GGTCTC 2 cut(s) 141, 2095
BsrBI CCGCTC 2 cut(s) 42, 197
BsrDI GCAATG 5 cut(s) 208, 553, 1407, 1764, 2181
BsrFI RCCGGY 2 cut(s) 1232, 2086
BsrI ACTGG 5 cut(s) 453, 474, 506, 1752, 1821
BssAI RCCGGY 2 cut(s) 1232, 2086
BssECI CCNNGG 6 cut(s) 123, 276, 656, 1498, 2261, 2326
BssNI GRCGYC 1 cut(s) 207
BssT1I CCWWGG 4 cut(s) 123, 276, 656, 2261
Bst2UI CCWGG 2 cut(s) 583, 1731
Bst4CI ACNGT 5 cut(s) 226, 260, 842, 1119, 1465
Bst6I CTCTTC 3 cut(s) 707, 1980, 2028
BstACI GRCGYC 1 cut(s) 207
BstAPI GCANNNNNTGC 1 cut(s) 170
BstC8I GCNNGC 8 cut(s) 74, 199, 401, 513, 935, 1414, 2112, 2317
BstDEI CTNAG 9 cut(s) 174, 339, 356, 791, 1551, 1858, 2076, 2295, 2308
BstDSI CCRYGG 3 cut(s) 276, 656, 2261
BstENI CCTNNNNNAGG 1 cut(s) 1497
BstF5I GGATG 8 cut(s) 184, 232, 286, 369, 385, 1757, 2011, 2020
BstFNI CGCG 1 cut(s) 2279
BstHHI GCGC 1 cut(s) 2281
BstMAI GTCTC 5 cut(s) 141, 221, 654, 768, 2095
BstMCI CGRYCG 2 cut(s) 1619, 2087
BstNI CCWGG 2 cut(s) 583, 1731
BstNSI RCATGY 3 cut(s) 515, 1166, 1928
BstSCI CCNGG 2 cut(s) 581, 1729
BstSFI CTRYAG 1 cut(s) 1649
BstSLI GKGCMC 2 cut(s) 119, 2362
BstUI CGCG 1 cut(s) 2279
BstV2I GAAGAC 1 cut(s) 1682
BstX2I RGATCY 3 cut(s) 32, 52, 1566
BstXI CCANNNNNNTGG 1 cut(s) 2137
BstYI RGATCY 3 cut(s) 32, 52, 1566
BstZI CGGCCG 1 cut(s) 2084
Bsu15I ATCGAT 1 cut(s) 1280
BsuI GTATCC 2 cut(s) 862, 1861
BsuRI GGCC 7 cut(s) 183, 191, 399, 662, 2086, 2141, 2325
BsuTUI ATCGAT 1 cut(s) 1280
BtgI CCRYGG 3 cut(s) 276, 656, 2261
BtgZI GCGATG 1 cut(s) 1877
BtsCI GGATG 8 cut(s) 184, 232, 286, 369, 385, 1757, 2011, 2020
BtsI GCAGTG 1 cut(s) 744
BtsIMutI CAGTG 5 cut(s) 481, 744, 847, 1548, 1828
BveI ACCTGC 5 cut(s) 1042, 1378, 1501, 1697, 1894
Cac8I GCNNGC 8 cut(s) 74, 199, 401, 513, 935, 1414, 2112, 2317
CaiI CAGNNNCTG 2 cut(s) 1028, 1886
CfoI GCGC 1 cut(s) 2281
Cfr10I RCCGGY 2 cut(s) 1232, 2086
Cfr13I GGNCC 4 cut(s) 44, 397, 563, 660
ClaI ATCGAT 1 cut(s) 1280
CseI GACGC 2 cut(s) 196, 203
Csp6I GTAC 4 cut(s) 222, 261, 1314, 1928
CspAI ACCGGT 1 cut(s) 1232
CviQI GTAC 4 cut(s) 222, 261, 1314, 1928
DdeI CTNAG 9 cut(s) 174, 339, 356, 791, 1551, 1858, 2076, 2295, 2308
DrdI GACNNNNNNGTC 1 cut(s) 2383
DriI GACNNNNNGTC 2 cut(s) 133, 1717
DseDI GACNNNNNNGTC 1 cut(s) 2383
EaeI YGGCCR 4 cut(s) 181, 189, 2084, 2139
EagI CGGCCG 1 cut(s) 2084
Eam1104I CTCTTC 3 cut(s) 707, 1980, 2028
Eam1105I GACNNNNNGTC 2 cut(s) 133, 1717
EarI CTCTTC 3 cut(s) 707, 1980, 2028
Ecl136II GAGCTC 2 cut(s) 700, 1764
EclXI CGGCCG 1 cut(s) 2084
Eco130I CCWWGG 4 cut(s) 123, 276, 656, 2261
Eco24I GRGCYC 5 cut(s) 78, 98, 702, 1766, 2180
Eco31I GGTCTC 2 cut(s) 141, 2095
Eco47I GGWCC 2 cut(s) 44, 563
Eco52I CGGCCG 1 cut(s) 2084
Eco53kI GAGCTC 2 cut(s) 700, 1764
Eco57I CTGAAG 3 cut(s) 94, 734, 1098
Eco88I CYCGRG 2 cut(s) 1497, 1931
EcoICRI GAGCTC 2 cut(s) 700, 1764
EcoNI CCTNNNNNAGG 1 cut(s) 1497
EcoO109I RGGNCCY 1 cut(s) 397
EcoRII CCWGG 2 cut(s) 581, 1729
EcoT14I CCWWGG 4 cut(s) 123, 276, 656, 2261
EcoT22I ATGCAT 1 cut(s) 1459
EcoT38I GRGCYC 5 cut(s) 78, 98, 702, 1766, 2180
ErhI CCWWGG 4 cut(s) 123, 276, 656, 2261
Esp3I CGTCTC 1 cut(s) 221
FalI AAGNNNNNCTT 2 cut(s) 1788, 1820
FaqI GGGAC 2 cut(s) 1444, 1921
FauI CCCGC 1 cut(s) 2347
FbaI TGATCA 2 cut(s) 1168, 1639
FokI GGATG 8 cut(s) 191, 219, 293, 356, 392, 1764, 2018, 2027
FriOI GRGCYC 5 cut(s) 78, 98, 702, 1766, 2180
FspBI CTAG 3 cut(s) 1563, 1740, 1967
GlaI GCGC 1 cut(s) 2280
GsaI CCCAGC 3 cut(s) 1701, 1960, 2195
GsuI CTGGAG 1 cut(s) 2034
HaeIII GGCC 7 cut(s) 183, 191, 399, 662, 2086, 2141, 2325
HapII CCGG 3 cut(s) 140, 1233, 2087
HgaI GACGC 2 cut(s) 196, 203
HhaI GCGC 1 cut(s) 2281
Hin1I GRCGYC 1 cut(s) 207
Hin6I GCGC 1 cut(s) 2279
HinP1I GCGC 1 cut(s) 2279
HindIII AAGCTT 3 cut(s) 827, 935, 1301
HinfI GANTC 6 cut(s) 16, 103, 668, 1181, 1270, 1934
HpaII CCGG 3 cut(s) 140, 1233, 2087
HphI GGTGA 3 cut(s) 307, 1482, 1721
Hpy166II GTNNAC 6 cut(s) 362, 446, 1745, 1784, 1947, 2360
Hpy188III TCNNGA 6 cut(s) 13, 176, 773, 790, 1262, 1686
Hpy8I GTNNAC 6 cut(s) 362, 446, 1745, 1784, 1947, 2360
Hpy99I CGWCG 1 cut(s) 826
HpyAV CCTTC 5 cut(s) 813, 895, 1087, 1421, 1615
HpyCH4III ACNGT 5 cut(s) 226, 260, 842, 1119, 1465
HpyCH4IV ACGT 5 cut(s) 494, 821, 1224, 1312, 1943
HpyF3I CTNAG 9 cut(s) 174, 339, 356, 791, 1551, 1858, 2076, 2295, 2308
HpySE526I ACGT 5 cut(s) 494, 821, 1224, 1312, 1943
Hsp92I GRCGYC 1 cut(s) 207
HspAI GCGC 1 cut(s) 2279
Ksp22I TGATCA 2 cut(s) 1168, 1639
LguI GCTCTTC 3 cut(s) 707, 1980, 2028
LmnI GCTCC 9 cut(s) 39, 733, 792, 1300, 1502, 1769, 1804, 2183, 2350
LweI GCATC 4 cut(s) 271, 1272, 1681, 1835
MaeI CTAG 3 cut(s) 1563, 1740, 1967
MaeII ACGT 5 cut(s) 494, 821, 1224, 1312, 1943
MaeIII GTNAC 5 cut(s) 313, 484, 984, 1350, 1709
MbiI CCGCTC 2 cut(s) 42, 197
MflI RGATCY 3 cut(s) 32, 52, 1566
MhlI GDGCHC 7 cut(s) 78, 98, 119, 702, 1766, 2180, 2362
MlsI TGGCCA 2 cut(s) 183, 2141
MluNI TGGCCA 2 cut(s) 183, 2141
MlyI GAGTC 3 cut(s) 97, 1264, 1943
MmeI TCCRAC 4 cut(s) 477, 571, 1127, 1898
Mox20I TGGCCA 2 cut(s) 183, 2141
Mph1103I ATGCAT 1 cut(s) 1459
MscI TGGCCA 2 cut(s) 183, 2141
MseI TTAA 5 cut(s) 431, 719, 1052, 1452, 1769
MslI CAYNNNNRTG 3 cut(s) 459, 1422, 1995
Msp20I TGGCCA 2 cut(s) 183, 2141
MspA1I CMGCKG 5 cut(s) 784, 1025, 1790, 2315, 2342
MspI CCGG 3 cut(s) 140, 1233, 2087
MspR9I CCNGG 2 cut(s) 583, 1731
MvaI CCWGG 2 cut(s) 583, 1731
MvnI CGCG 1 cut(s) 2279
NcoI CCATGG 3 cut(s) 276, 656, 2261
NlaIV GGNNCC 6 cut(s) 46, 118, 398, 788, 1568, 2179
NmeAIII GCCGAG 1 cut(s) 2351
NmuCI GTSAC 2 cut(s) 313, 1709
NsiI ATGCAT 1 cut(s) 1459
NspI RCATGY 3 cut(s) 515, 1166, 1928
PaeI GCATGC 1 cut(s) 515
PaqCI CACCTGC 4 cut(s) 1042, 1501, 1697, 1894
PciI ACATGT 2 cut(s) 1162, 1924
PciSI GCTCTTC 3 cut(s) 707, 1980, 2028
PfeI GAWTC 3 cut(s) 16, 668, 1181
PinAI ACCGGT 1 cut(s) 1232
Ple19I CGATCG 1 cut(s) 1619
PleI GAGTC 3 cut(s) 97, 1264, 1942
PpsI GAGTC 3 cut(s) 97, 1264, 1942
PscI ACATGT 2 cut(s) 1162, 1924
PshBI ATTAAT 1 cut(s) 1452
Psp124BI GAGCTC 2 cut(s) 702, 1766
Psp1406I AACGTT 1 cut(s) 494
Psp6I CCWGG 2 cut(s) 581, 1729
PspFI CCCAGC 3 cut(s) 1697, 1956, 2191
PspGI CCWGG 2 cut(s) 581, 1729
PspN4I GGNNCC 6 cut(s) 46, 118, 398, 788, 1568, 2179
PspPI GGNCC 4 cut(s) 44, 397, 563, 660
PsrI GAACNNNNNNTAC 4 cut(s) 345, 377, 1372, 1404
PstNI CAGNNNCTG 2 cut(s) 1028, 1886
PsuI RGATCY 3 cut(s) 32, 52, 1566
PvuI CGATCG 1 cut(s) 1619
PvuII CAGCTG 3 cut(s) 1025, 1790, 2315
RsaI GTAC 4 cut(s) 223, 262, 1315, 1929
RsaNI GTAC 4 cut(s) 222, 261, 1314, 1928
RseI CAYNNNNRTG 3 cut(s) 459, 1422, 1995
SacI GAGCTC 2 cut(s) 702, 1766
SapI GCTCTTC 3 cut(s) 707, 1980, 2028
SaqAI TTAA 5 cut(s) 431, 719, 1052, 1452, 1769
Sau96I GGNCC 4 cut(s) 44, 397, 563, 660
ScaI AGTACT 1 cut(s) 262
SchI GAGTC 3 cut(s) 97, 1264, 1943
ScrFI CCNGG 2 cut(s) 583, 1731
SduI GDGCHC 7 cut(s) 78, 98, 119, 702, 1766, 2180, 2362
SfaNI GCATC 4 cut(s) 271, 1272, 1681, 1835
SfcI CTRYAG 1 cut(s) 1649
SinI GGWCC 2 cut(s) 44, 563
SmiMI CAYNNNNRTG 3 cut(s) 459, 1422, 1995
SmlI CTYRAG 1 cut(s) 1775
SmoI CTYRAG 1 cut(s) 1775
SphI GCATGC 1 cut(s) 515
SspI AATATT 1 cut(s) 386
SspMI CTAG 3 cut(s) 1563, 1740, 1967
SstI GAGCTC 2 cut(s) 702, 1766
StyD4I CCNGG 2 cut(s) 581, 1729
StyI CCWWGG 4 cut(s) 123, 276, 656, 2261
TaaI ACNGT 5 cut(s) 226, 260, 842, 1119, 1465
TaiI ACGT 5 cut(s) 497, 824, 1227, 1315, 1946
TaqI TCGA 7 cut(s) 19, 824, 1144, 1280, 1615, 1619, 1901
TaqII GACCGA 1 cut(s) 1149
TatI WGTACW 1 cut(s) 260
TauI GCSGC 7 cut(s) 194, 197, 638, 787, 2086, 2189, 2279
TfiI GAWTC 3 cut(s) 16, 668, 1181
Tru1I TTAA 5 cut(s) 431, 719, 1052, 1452, 1769
Tru9I TTAA 5 cut(s) 431, 719, 1052, 1452, 1769
TscAI CASTG 5 cut(s) 481, 751, 847, 1555, 1828
TseFI GTSAC 2 cut(s) 313, 1709
Tsp45I GTSAC 2 cut(s) 313, 1709
TspDTI ATGAA 7 cut(s) 396, 443, 871, 1377, 1440, 2007, 2172
TspGWI ACGGA 2 cut(s) 209, 1728
TspRI CASTG 5 cut(s) 481, 751, 847, 1555, 1828
VneI GTGCAC 1 cut(s) 2358
VpaK11BI GGWCC 2 cut(s) 44, 563
VspI ATTAAT 1 cut(s) 1452
XagI CCTNNNNNAGG 1 cut(s) 1497
XapI RAATTY 8 cut(s) 8, 888, 895, 943, 1013, 1082, 1681, 2221
XceI RCATGY 3 cut(s) 515, 1166, 1928
XspI CTAG 3 cut(s) 1563, 1740, 1967
ZrmI AGTACT 1 cut(s) 262
Zsp2I ATGCAT 1 cut(s) 1459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.