AT2G41370
NAC Family

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Acts redundantly with BOP2. BOP1 2 promote leaf and floral meristem fate and determinacy in a pathway targeting AP1 and AGL24. BOP1 2 act as transcriptional co- regulators through direct interaction with TGA factors, including PAN, a direct regulator of AP1. Controls lateral organ fate through positive regulation of adaxial-abaxial polarity genes ATHB-14 PHB, YAB1 FIL and YAB3, and through positive regulation of LOB domain-containing genes LOB, LBD6 AS2 and LBD36. Promotes and maintains a developmentally determinate state in leaf cells through the negative regulation of JAG, JGL and class I KNOX genes. Is also involved in nectary development, formation of normal abscission zones and suppression of bract formation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012041
Physical Location & Seq
Reverse (-)
17237727 .. 17240609
2883 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G41370.1

Sequence Viewer

Length: 1476 bp
ATGAGCAATCTTGAAGAATCTTTGAGATCTCTATCGTTGGATTTCCTGAACCTACTAATCAACGGTCAAGCTTTCTCCGACGTGACTTTCAGCGTTGAAGGTCGTTTAGTCCACGCTCACCGTTGTATCCTCGCCGCACGGAGTCTTTTCTTCCGCAAATTCTTTTGTGGGACAGACTCACCACAACCTGTCACAGGTATAGACCCGACCCAACATGGGTCCGTACCCGCTAGCCCAACAAGAGGCTCCACGGCCCCAGCTGGAATTATACCAGTGAACTCAGTCGGTTATGAGGTTTTTCTGTTGCTACTTCAGTTTCTTTATAGCGGACAAGTCTCCATCGTGCCGCAGAAACACGAGCCTAGACCTAATTGTGGCGAGAGAGGATGTTGGCACACTCATTGCTCAGCCGCCGTTGATCTTGCTCTTGATACTCTCGCCGCCTCTCGTTACTTCGGCGTCGAGCAGCTCGCATTGCTCACCCAGAAACAATTGGCAAGCATGGTGGAGAAAGCCTCTATCGAAGATGTGATGAAAGTTTTAATAGCATCAAGAAAGCAAGACATGCATCAATTATGGACCACCTGCTCTCACTTAGTTGCTAAATCAGGTCTCCCACCAGAGATTCTTGCCAAGCATCTCCCTATTGACGTCGTCACCAAAATAGAAGAGCTTCGTCTTAAATCTTCTATAGCTCGCCGTTCTCTAATGCCTCACAACCACCACCATGATCTCAGCGTGGCTCAAGACCTAGAAGATCAAAAGATTAGAAGGATGAGACGAGCTTTGGATTCATCAGACGTGGAACTAGTGAAGCTGATGGTAATGGGAGAAGGACTCAATCTTGATGAGTCGTTAGCATTGCATTACGCTGTTGAAAGCTGTAGTAGAGAAGTTGTGAAGGCTTTGCTTGAGCTTGGAGCTGCCGATGTGAATTATCCGGCGGGTCCGGCAGGGAAAACACCTTTGCACATCGCGGCTGAGATGGTCTCTCCAGACATGGTGGCTGTTCTGTTAGACCACCATGCTGATCCTAATGTGAGGACAGTTGGTGGAATCACGCCTCTTGATATCCTTAGAACATTAACTTCGGATTTCTTGTTCAAGGGGGCAGTTCCTGGATTGACTCACATTGAACCGAATAAACTTAGGCTTTGCCTCGAGCTTGTTCAATCCGCTGCAATGGTGATATCTCGAGAAGAAGGAAACAATAGCAACAACCAAAACAATGATAACAATACCGGGATTTACCCTCATATGAATGAGGAGCACAATAGTGGAAGCAGTGGAGGGAGCAATAACAATTTGGATTCAAGATTGGTTTATCTCAATCTTGGAGCAGGTACGGGTCAGATGGGTCCAGGTCGAGATCAAGGGGATGACCATAACAGTCAGAGGGAAGGTATGAGTCGGCATCATCATCATCATCAAGACCCATCTACAATGTATCATCACCATCATCAACATCACTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003002 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009798 GO:0009838 GO:0009864 GO:0009867 GO:0009888 GO:0009908 GO:0009943 GO:0009944 GO:0009954 GO:0009955 GO:0009965 GO:0009987 GO:0010016 GO:0010022 GO:0010033 GO:0010073 GO:0010227 GO:0010254 GO:0010432 GO:0010433 GO:0010434 GO:0010498 GO:0010582 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0022414 GO:0023052 GO:0030162 GO:0030163 GO:0031347 GO:0031349 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0048366 GO:0048367 GO:0048437 GO:0048439 GO:0048507 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090567 GO:0090698 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1905392 GO:1905393 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank_2 Ank_3 BTB DUF3420

Protein Analysis

491

Amino Acids

54.0

Weight (kDa)

6.23

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 19 - 118 1.4e-11 BTB/POZ domain
DUF3420 PF11900 204 - 260 8.4e-13 Domain of unknown function (DUF3420)
Ank_2 PF12796 265 - 348 1.1e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 304 - 358 3.1e-08 Ankyrin repeats (many copies)
Ank PF00023 319 - 349 4.4e-06 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41370 AT3G57130
fragaria_vesca FvH4_6g25090
malus_domestica MD12G1091100.v1.1 MD14G1083700.v1.1
prunus_persica Prupe.7G046800_v2.0.a1
pyrus_communis pycom12g07650 pycom14g07290
rosa_chinensis RchiOBHm_Chr2g0124891
rosa_laevigata RLG00000018831
rosa_multiflora Rmu_sc0005075.1_g000013
rosa_roxburghii Rroxscaffold_2G00119550
rosa_rugosa Rorug02G0253100
rosa_samantha Rh2AG312800 Rh2BG321000 Rh2CG302300 Rh2DG338400
rosa_wichuraiana Rw0G021780 Rw2G025260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 593
AatII GACGTC 1 cut(s) 654
Acc36I ACCTGC 2 cut(s) 593, 1331
AccII CGCG 1 cut(s) 977
AclWI GGATC 1 cut(s) 1025
AcsI RAATTY 1 cut(s) 158
AcuI CTGAAG 1 cut(s) 296
AcyI GRCGYC 2 cut(s) 459, 651
AfaI GTAC 2 cut(s) 225, 1345
AfiI CCNNNNNNNGG 4 cut(s) 194, 216, 242, 374
AgsI TTSAA 7 cut(s) 14, 98, 878, 1105, 1136, 1172, 1314
AhlI ACTAGT 1 cut(s) 808
AjiI CACGTC 2 cut(s) 82, 802
AjnI CCWGG 2 cut(s) 1117, 1360
AleI CACNNNNGTG 1 cut(s) 1275
AloI GAACNNNNNNTCC 2 cut(s) 1085, 1117
Alw21I GWGCWC 1 cut(s) 1272
Alw26I GTCTC 4 cut(s) 340, 617, 772, 994
AlwI GGATC 1 cut(s) 1025
AlwNI CAGNNNCTG 1 cut(s) 1118
Ama87I CYCGRG 2 cut(s) 1160, 1194
AoxI GGCC 1 cut(s) 252
ApeKI GCWGC 3 cut(s) 466, 923, 1178
ApoI RAATTY 1 cut(s) 158
Asp700I GAANNNNTTC 1 cut(s) 672
AspS9I GGNCC 5 cut(s) 219, 253, 579, 947, 1358
AsuC2I CCSGG 1 cut(s) 1243
AsuHPI GGTGA 6 cut(s) 110, 171, 472, 649, 1198, 1445
AsuNHI GCTAGC 1 cut(s) 230
AvaI CYCGRG 2 cut(s) 1160, 1194
AvaII GGWCC 4 cut(s) 219, 579, 947, 1358
BaeI ACNNNNGTAYC 2 cut(s) 109, 142
BauI CACGAG 1 cut(s) 356
Bbv12I GWGCWC 1 cut(s) 1272
BbvI GCAGC 3 cut(s) 478, 910, 1165
BccI CCATC 6 cut(s) 347, 814, 979, 1348, 1444, 1464
BceAI ACGGC 3 cut(s) 267, 398, 684
BciT130I CCWGG 2 cut(s) 1119, 1362
BciVI GTATCC 1 cut(s) 137
BcnI CCSGG 1 cut(s) 1243
BcoDI GTCTC 4 cut(s) 340, 617, 772, 994
BcuI ACTAGT 1 cut(s) 808
BfaI CTAG 5 cut(s) 231, 363, 752, 809, 1474
BfmI CTRYAG 2 cut(s) 690, 883
BfuAI ACCTGC 2 cut(s) 593, 1331
BfuI GTATCC 1 cut(s) 137
BglII AGATCT 1 cut(s) 26
BisI GCNGC 8 cut(s) 135, 347, 411, 441, 467, 924, 978, 1179
BlpI GCTNAGC 1 cut(s) 406
BlsI GCNGC 8 cut(s) 136, 348, 412, 442, 468, 925, 979, 1180
Bme1390I CCNGG 3 cut(s) 1119, 1243, 1362
Bme18I GGWCC 4 cut(s) 219, 579, 947, 1358
BmeT110I CYCGRG 2 cut(s) 1160, 1194
BmgBI CACGTC 2 cut(s) 82, 802
BmgT120I GGNCC 5 cut(s) 219, 253, 579, 947, 1358
BmiI GGNNCC 5 cut(s) 220, 247, 255, 948, 1359
BmrFI CCNGG 3 cut(s) 1119, 1243, 1362
BmsI GCATC 4 cut(s) 557, 577, 646, 1423
BmtI GCTAGC 1 cut(s) 234
BplI GAGNNNNNCTC 6 cut(s) 500, 532, 822, 854, 974, 1006
BpmI CTGGAG 1 cut(s) 978
Bpu1102I GCTNAGC 1 cut(s) 406
BpuEI CTTGAG 2 cut(s) 729, 932
BpuMI CCSGG 1 cut(s) 1243
BsaBI GATNNNNATC 1 cut(s) 31
BsaHI GRCGYC 2 cut(s) 459, 651
BsaI GGTCTC 2 cut(s) 617, 994
BsaJI CCNNGG 1 cut(s) 249
Bsc4I CCNNNNNNNGG 4 cut(s) 194, 216, 242, 374
Bse1I ACTGG 1 cut(s) 272
Bse3DI GCAATG 4 cut(s) 400, 473, 860, 1188
Bse8I GATNNNNATC 1 cut(s) 31
BseBI CCWGG 2 cut(s) 1119, 1362
BseDI CCNNGG 1 cut(s) 249
BseGI GGATG 3 cut(s) 392, 780, 1384
BseJI GATNNNNATC 1 cut(s) 31
BseLI CCNNNNNNNGG 4 cut(s) 194, 216, 242, 374
BseMI GCAATG 4 cut(s) 400, 473, 860, 1188
BseMII CTCAG 4 cut(s) 294, 420, 748, 972
BseNI ACTGG 1 cut(s) 272
BseRI GAGGAG 1 cut(s) 1280
BseXI GCAGC 3 cut(s) 478, 910, 1165
BseYI CCCAGC 1 cut(s) 256
Bsh1236I CGCG 1 cut(s) 977
BshFI GGCC 1 cut(s) 254
BsiHKAI GWGCWC 1 cut(s) 1272
BsiHKCI CYCGRG 2 cut(s) 1160, 1194
BsiSI CCGG 3 cut(s) 941, 950, 1242
BslFI GGGAC 1 cut(s) 184
BslI CCNNNNNNNGG 4 cut(s) 194, 216, 242, 374
BsmAI GTCTC 4 cut(s) 340, 617, 772, 994
BsmBI CGTCTC 1 cut(s) 772
BsmFI GGGAC 1 cut(s) 184
BsnI GGCC 1 cut(s) 254
Bso31I GGTCTC 2 cut(s) 617, 994
BsoBI CYCGRG 2 cut(s) 1160, 1194
Bsp1286I GDGCHC 1 cut(s) 1272
Bsp143I GATC 6 cut(s) 26, 418, 730, 757, 1030, 1369
Bsp1720I GCTNAGC 1 cut(s) 406
BspANI GGCC 1 cut(s) 254
BspCNI CTCAG 4 cut(s) 293, 419, 747, 973
BspFNI CGCG 1 cut(s) 977
BspLI GGNNCC 5 cut(s) 220, 247, 255, 948, 1359
BspMI ACCTGC 2 cut(s) 593, 1331
BspOI GCTAGC 1 cut(s) 234
BspPI GGATC 1 cut(s) 1025
BspQI GCTCTTC 1 cut(s) 663
BspTNI GGTCTC 2 cut(s) 617, 994
BsrDI GCAATG 4 cut(s) 400, 473, 860, 1188
BsrI ACTGG 1 cut(s) 272
BssECI CCNNGG 1 cut(s) 249
BssMI GATC 6 cut(s) 26, 418, 730, 757, 1030, 1369
BssNI GRCGYC 2 cut(s) 459, 651
BssSI CACGAG 1 cut(s) 356
Bst2BI CACGAG 1 cut(s) 356
Bst2UI CCWGG 2 cut(s) 1119, 1362
Bst4CI ACNGT 4 cut(s) 65, 122, 1048, 1391
Bst6I CTCTTC 1 cut(s) 663
BstACI GRCGYC 2 cut(s) 459, 651
BstAPI GCANNNNNTGC 1 cut(s) 565
BstC8I GCNNGC 4 cut(s) 232, 471, 499, 697
BstDEI CTNAG 7 cut(s) 280, 406, 595, 734, 981, 1076, 1148
BstDSI CCRYGG 1 cut(s) 249
BstENI CCTNNNNNAGG 1 cut(s) 192
BstF5I GGATG 3 cut(s) 392, 780, 1384
BstFNI CGCG 1 cut(s) 977
BstKTI GATC 6 cut(s) 29, 421, 733, 760, 1033, 1372
BstMAI GTCTC 4 cut(s) 340, 617, 772, 994
BstMBI GATC 6 cut(s) 26, 418, 730, 757, 1030, 1369
BstMWI GCNNNNNNNGC 3 cut(s) 475, 565, 950
BstNI CCWGG 2 cut(s) 1119, 1362
BstNSI RCATGY 1 cut(s) 568
BstSCI CCNGG 3 cut(s) 1117, 1241, 1360
BstSFI CTRYAG 2 cut(s) 690, 883
BstUI CGCG 1 cut(s) 977
BstV1I GCAGC 3 cut(s) 478, 910, 1165
BstX2I RGATCY 1 cut(s) 26
BstYI RGATCY 1 cut(s) 26
BsuI GTATCC 1 cut(s) 137
BsuRI GGCC 1 cut(s) 254
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 958
BtrI CACGTC 2 cut(s) 82, 802
BtsCI GGATG 3 cut(s) 392, 780, 1384
BtsI GCAGTG 1 cut(s) 1291
BtsIMutI CAGTG 2 cut(s) 279, 1291
BveI ACCTGC 2 cut(s) 593, 1331
Cac8I GCNNGC 4 cut(s) 232, 471, 499, 697
CaiI CAGNNNCTG 1 cut(s) 1118
Cfr13I GGNCC 5 cut(s) 219, 253, 579, 947, 1358
CseI GACGC 1 cut(s) 448
Csp6I GTAC 2 cut(s) 224, 1344
CspCI CAANNNNNGTGG 2 cut(s) 486, 521
CviAII CATG 6 cut(s) 215, 502, 565, 728, 1000, 1025
CviQI GTAC 2 cut(s) 224, 1344
DdeI CTNAG 7 cut(s) 280, 406, 595, 734, 981, 1076, 1148
DpnI GATC 6 cut(s) 28, 420, 732, 759, 1032, 1371
DpnII GATC 6 cut(s) 26, 418, 730, 757, 1030, 1369
Eam1104I CTCTTC 1 cut(s) 663
EarI CTCTTC 1 cut(s) 663
Eco31I GGTCTC 2 cut(s) 617, 994
Eco32I GATATC 2 cut(s) 1072, 1191
Eco47I GGWCC 4 cut(s) 219, 579, 947, 1358
Eco57I CTGAAG 1 cut(s) 296
Eco88I CYCGRG 2 cut(s) 1160, 1194
EcoNI CCTNNNNNAGG 1 cut(s) 192
EcoRII CCWGG 2 cut(s) 1117, 1360
EcoRV GATATC 2 cut(s) 1072, 1191
EcoT22I ATGCAT 1 cut(s) 570
Esp3I CGTCTC 1 cut(s) 772
FaeI CATG 6 cut(s) 218, 505, 568, 731, 1003, 1028
FaqI GGGAC 1 cut(s) 184
FatI CATG 6 cut(s) 214, 501, 564, 727, 999, 1024
FauI CCCGC 2 cut(s) 235, 937
FauNDI CATATG 1 cut(s) 1257
Fnu4HI GCNGC 8 cut(s) 135, 347, 411, 441, 467, 924, 978, 1179
FokI GGATG 3 cut(s) 399, 787, 1391
Fsp4HI GCNGC 8 cut(s) 135, 347, 411, 441, 467, 924, 978, 1179
FspBI CTAG 5 cut(s) 231, 363, 752, 809, 1474
GluI GCNGC 8 cut(s) 135, 347, 411, 441, 467, 924, 978, 1179
GsaI CCCAGC 1 cut(s) 260
GsuI CTGGAG 1 cut(s) 978
HaeIII GGCC 1 cut(s) 254
HapII CCGG 3 cut(s) 941, 950, 1242
HgaI GACGC 1 cut(s) 448
Hin1I GRCGYC 2 cut(s) 459, 651
Hin1II CATG 6 cut(s) 218, 505, 568, 731, 1003, 1028
HindIII AAGCTT 1 cut(s) 69
HpaII CCGG 3 cut(s) 941, 950, 1242
HphI GGTGA 6 cut(s) 110, 171, 472, 649, 1198, 1445
Hpy166II GTNNAC 2 cut(s) 112, 277
Hpy188I TCNGA 5 cut(s) 79, 799, 1093, 1353, 1395
Hpy8I GTNNAC 2 cut(s) 112, 277
Hpy99I CGWCG 3 cut(s) 83, 464, 656
HpyAV CCTTC 6 cut(s) 92, 765, 827, 895, 1196, 1394
HpyCH4III ACNGT 4 cut(s) 65, 122, 1048, 1391
HpyCH4IV ACGT 3 cut(s) 81, 651, 801
HpyCH4V TGCA 4 cut(s) 568, 865, 970, 1181
HpyF10VI GCNNNNNNNGC 3 cut(s) 475, 565, 950
HpyF3I CTNAG 7 cut(s) 280, 406, 595, 734, 981, 1076, 1148
HpySE526I ACGT 3 cut(s) 81, 651, 801
Hsp92I GRCGYC 2 cut(s) 459, 651
Hsp92II CATG 6 cut(s) 218, 505, 568, 731, 1003, 1028
Kzo9I GATC 6 cut(s) 26, 418, 730, 757, 1030, 1369
LguI GCTCTTC 1 cut(s) 663
LmnI GCTCC 5 cut(s) 251, 920, 1267, 1293, 1337
Lsp1109I GCAGC 3 cut(s) 478, 910, 1165
LweI GCATC 4 cut(s) 557, 577, 646, 1423
MaeI CTAG 5 cut(s) 231, 363, 752, 809, 1474
MaeII ACGT 3 cut(s) 81, 651, 801
MaeIII GTNAC 4 cut(s) 82, 190, 449, 655
MalI GATC 6 cut(s) 28, 420, 732, 759, 1032, 1371
MboI GATC 6 cut(s) 26, 418, 730, 757, 1030, 1369
MboII GAAGA 7 cut(s) 26, 142, 536, 678, 680, 767, 1211
MfeI CAATTG 1 cut(s) 491
MflI RGATCY 1 cut(s) 26
MhlI GDGCHC 1 cut(s) 1272
MluCI AATT 7 cut(s) 158, 264, 370, 491, 572, 934, 1303
MlyI GAGTC 6 cut(s) 151, 170, 831, 860, 1120, 1417
MmeI TCCRAC 2 cut(s) 18, 102
Mph1103I ATGCAT 1 cut(s) 570
MroXI GAANNNNTTC 1 cut(s) 672
MseI TTAA 3 cut(s) 542, 681, 1085
MslI CAYNNNNRTG 3 cut(s) 726, 1260, 1275
MspA1I CMGCKG 2 cut(s) 260, 1178
MspI CCGG 3 cut(s) 941, 950, 1242
MspR9I CCNGG 3 cut(s) 1119, 1243, 1362
MunI CAATTG 1 cut(s) 491
MvaI CCWGG 2 cut(s) 1119, 1362
MvnI CGCG 1 cut(s) 977
MwoI GCNNNNNNNGC 3 cut(s) 475, 565, 950
NciI CCSGG 1 cut(s) 1243
NdeI CATATG 1 cut(s) 1257
NdeII GATC 6 cut(s) 26, 418, 730, 757, 1030, 1369
NheI GCTAGC 1 cut(s) 230
NlaIII CATG 6 cut(s) 218, 505, 568, 731, 1003, 1028
NlaIV GGNNCC 5 cut(s) 220, 247, 255, 948, 1359
NmuCI GTSAC 3 cut(s) 82, 190, 655
NsiI ATGCAT 1 cut(s) 570
NspI RCATGY 1 cut(s) 568
OliI CACNNNNGTG 1 cut(s) 1275
PaeR7I CTCGAG 2 cut(s) 1160, 1194
PaqCI CACCTGC 1 cut(s) 593
PciSI GCTCTTC 1 cut(s) 663
PdmI GAANNNNTTC 1 cut(s) 672
PfeI GAWTC 5 cut(s) 17, 625, 791, 1056, 1310
PflFI GACNNNGTC 1 cut(s) 653
PfoI TCCNGGA 1 cut(s) 1117
PkrI GCNGC 8 cut(s) 136, 348, 412, 442, 468, 925, 979, 1180
PleI GAGTC 6 cut(s) 150, 170, 831, 859, 1120, 1416
PpsI GAGTC 6 cut(s) 150, 170, 831, 859, 1120, 1416
Psp6I CCWGG 2 cut(s) 1117, 1360
PspFI CCCAGC 1 cut(s) 256
PspGI CCWGG 2 cut(s) 1117, 1360
PspN4I GGNNCC 5 cut(s) 220, 247, 255, 948, 1359
PspPI GGNCC 5 cut(s) 219, 253, 579, 947, 1358
PspXI VCTCGAGB 1 cut(s) 1160
PstNI CAGNNNCTG 1 cut(s) 1118
PsuI RGATCY 1 cut(s) 26
PsyI GACNNNGTC 1 cut(s) 653
PvuII CAGCTG 1 cut(s) 260
RsaI GTAC 2 cut(s) 225, 1345
RsaNI GTAC 2 cut(s) 224, 1344
RseI CAYNNNNRTG 3 cut(s) 726, 1260, 1275
SapI GCTCTTC 1 cut(s) 663
SaqAI TTAA 3 cut(s) 542, 681, 1085
SatI GCNGC 8 cut(s) 135, 347, 411, 441, 467, 924, 978, 1179
Sau3AI GATC 6 cut(s) 26, 418, 730, 757, 1030, 1369
Sau96I GGNCC 5 cut(s) 219, 253, 579, 947, 1358
SchI GAGTC 6 cut(s) 151, 170, 831, 860, 1120, 1417
ScrFI CCNGG 3 cut(s) 1119, 1243, 1362
SduI GDGCHC 1 cut(s) 1272
SfaNI GCATC 4 cut(s) 557, 577, 646, 1423
SfcI CTRYAG 2 cut(s) 690, 883
Sfr274I CTCGAG 2 cut(s) 1160, 1194
SinI GGWCC 4 cut(s) 219, 579, 947, 1358
SlaI CTCGAG 2 cut(s) 1160, 1194
SmiMI CAYNNNNRTG 3 cut(s) 726, 1260, 1275
SmlI CTYRAG 4 cut(s) 744, 911, 1160, 1194
SmoI CTYRAG 4 cut(s) 744, 911, 1160, 1194
SpeI ACTAGT 1 cut(s) 808
Sse9I AATT 7 cut(s) 158, 264, 370, 491, 572, 934, 1303
SspMI CTAG 5 cut(s) 231, 363, 752, 809, 1474
StyD4I CCNGG 3 cut(s) 1117, 1241, 1360
TaaI ACNGT 4 cut(s) 65, 122, 1048, 1391
TaiI ACGT 3 cut(s) 84, 654, 804
TaqI TCGA 5 cut(s) 462, 522, 1161, 1195, 1366
TasI AATT 7 cut(s) 158, 264, 370, 491, 572, 934, 1303
TauI GCSGC 5 cut(s) 137, 349, 413, 443, 980
TfiI GAWTC 5 cut(s) 17, 625, 791, 1056, 1310
Tru1I TTAA 3 cut(s) 542, 681, 1085
Tru9I TTAA 3 cut(s) 542, 681, 1085
TscAI CASTG 2 cut(s) 279, 1291
TseFI GTSAC 3 cut(s) 82, 190, 655
TseI GCWGC 3 cut(s) 466, 923, 1178
Tsp45I GTSAC 3 cut(s) 82, 190, 655
TspDTI ATGAA 3 cut(s) 548, 783, 1274
TspGWI ACGGA 2 cut(s) 154, 211
TspRI CASTG 2 cut(s) 279, 1291
Tth111I GACNNNGTC 1 cut(s) 653
VpaK11BI GGWCC 4 cut(s) 219, 579, 947, 1358
XagI CCTNNNNNAGG 1 cut(s) 192
XapI RAATTY 1 cut(s) 158
XceI RCATGY 1 cut(s) 568
XhoI CTCGAG 2 cut(s) 1160, 1194
XmnI GAANNNNTTC 1 cut(s) 672
XspI CTAG 5 cut(s) 231, 363, 752, 809, 1474
ZraI GACGTC 1 cut(s) 652
Zsp2I ATGCAT 1 cut(s) 570
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.