FvH4_6g25090

Regulatory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0012041
Physical Location & Seq
Forward (+)
19041447 .. 19045465
4019 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g25090.t1

Sequence Viewer

Length: 1521 bp
ATGAGCAGCCTGGAAGACTCTCTGAGATCTCTGTCCCTGGACTACCTGAATCTGCTCATCAACGGCCAAGCCTTCAGTGACGTCACCTTCAGCGTGGAGGGTCGTCTGGTCCATGCGCACAGGTGCATCCTGGCTGCGCGGAGCCTCTTCTTCCGCAAGTTCTTCTGCGGGCCGGACCCTCCTTCGGGGCTCGACCCGGTGTCATCCCCGGGGTCGTGCAGGTCGGGTACGTCGTCGTCGACGTCACAGAGAGGAGGGATGAGCAGCTCGCAGGTTATACCGGTGAACTCGGTCGGGTACGAGGTGTTCTTGTTGCTGCTGCAGTTTCTGTACAGCGGGCAGGTCTCCATAGTGCCTCAGAAACACGAGCCCAGGCCTAACTGTGGGGAGAGGGGCTGTTGGCACACGCATTGCACCTCAGCCGTCGATCTCGCCCTTGACACTCTCGCCGCCGCTAGATCTTTTGGTGTTGAACAACTTGCATTGCTTACTCAGAAGCAATTGGCTAGCATGGTGGAAAAGGCGTCAATTGATGATGTGATGAAAGTTCTATTAGCTTCGAGAAAGCAGGACATGCACCAGCTCTGGACAACGTGCTCTCACCTTGTTGCCAAGTCTGGTCTCCCGCCGGAGGTACTCGCCAAGCACCTTCCCATCGACGTTGTGGCCAAAATCGAAGAGCTCCGCCTCAAATCCTCCATCGCACGCCGCTCAATGATGCCCCACCACCACCACCATCACCACCACCACGACATGGGTGCTGCTGCGGATCTAGAGGACCAGAAGATTCGTCGTATGAGGAGAGCTTTGGACTCATCGGATGTCGAGCTCGTCAAGCTTATGGTGATGGGGGAAGGCCTAAATCTGGACGAGGCTTTGGCATTACACTATGCTGTCGAAAGTTGTAGCCGAGAAGTGGTGAAAGCTTTACTTGAACTCGGAGCAGCCGATGTTAACTACCCGGCCGGGCCAGCTGGCAAAACCCCGCTCCACATTGCCTCTGAAATGGTGTCTCCGGACATGGTGGCCGTGCTTCTTGACCACCATGCTGACCCCAATGTCCGTACCGTTGACGGAGTCACTCCCCTCGATGTGCTTCGAACCCTAACATCGGATTTTCTTTTCAAAGGGGCTGTTCCCGGACTGACGCACATTGAACCCAACAAGCTCAGGCTCTGCCTTGAGCTTGTTCAGTCGGCTGCTCTTGTTCTTTCGCGAGAAGAAGGCAATAACAATGCAAACAATTCTGCTTCTAATTCTTCAAACACGGCCATTTATCAACCGATGAGTGATCATCACGATCACCATAGCAGCGGCAGTGGCGGCAGCAATATTAGCCTTAACTTGGATTCAAGATTGGTGTATTTGAATCTTGGGGCAACCGGGTCTTCCGCTCCTCAAAATCAAATGGGGTCTTCAAGAATGGATAGTGAAGATCATCATCAGCATCATCATCACTCTCACGGTAGACAAGGTGGCTGTGATCCATCAACAATGTACCACCACTCCCATGACTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003002 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009798 GO:0009838 GO:0009864 GO:0009867 GO:0009888 GO:0009908 GO:0009943 GO:0009944 GO:0009954 GO:0009955 GO:0009965 GO:0009987 GO:0010016 GO:0010022 GO:0010033 GO:0010073 GO:0010227 GO:0010254 GO:0010432 GO:0010433 GO:0010434 GO:0010498 GO:0010582 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0022414 GO:0023052 GO:0030162 GO:0030163 GO:0031347 GO:0031349 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0048366 GO:0048367 GO:0048437 GO:0048439 GO:0048507 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090567 GO:0090698 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1905392 GO:1905393 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank_2 Ank_3 BTB DUF3420

Protein Analysis

507

Amino Acids

55.13

Weight (kDa)

6.3

Isoelectric Point (pI)

52.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 19 - 57 1.2e-07 BTB/POZ domain
DUF3420 PF11900 207 - 267 2e-12 Domain of unknown function (DUF3420)
Ank_2 PF12796 272 - 355 4.9e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 311 - 365 5e-07 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41370 AT3G57130
fragaria_vesca FvH4_6g25090
malus_domestica MD12G1091100.v1.1 MD14G1083700.v1.1
prunus_persica Prupe.7G046800_v2.0.a1
pyrus_communis pycom12g07650 pycom14g07290
rosa_chinensis RchiOBHm_Chr2g0124891
rosa_laevigata RLG00000018831
rosa_multiflora Rmu_sc0005075.1_g000013
rosa_roxburghii Rroxscaffold_2G00119550
rosa_rugosa Rorug02G0253100
rosa_samantha Rh2AG312800 Rh2BG321000 Rh2CG302300 Rh2DG338400
rosa_wichuraiana Rw0G021780 Rw2G025260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1058
AatII GACGTC 2 cut(s) 84, 245
Acc16I TGCGCA 1 cut(s) 117
Acc36I ACCTGC 3 cut(s) 210, 262, 331
AccB7I CCANNNNNTGG 1 cut(s) 754
AccBSI CCGCTC 3 cut(s) 711, 988, 1394
AccI GTMKAC 2 cut(s) 239, 1468
AccII CGCG 2 cut(s) 139, 1216
AccIII TCCGGA 1 cut(s) 1015
AclWI GGATC 2 cut(s) 777, 1478
AcoI YGGCCR 5 cut(s) 64, 666, 963, 1026, 1269
AcuI CTGAAG 2 cut(s) 58, 73
AcyI GRCGYC 3 cut(s) 81, 242, 524
AfaI GTAC 6 cut(s) 229, 299, 332, 636, 1066, 1499
AfiI CCNNNNNNNGG 9 cut(s) 184, 185, 383, 631, 754, 865, 916, 1111, 1345
AgeI ACCGGT 1 cut(s) 280
AgsI TTSAA 8 cut(s) 473, 935, 1126, 1157, 1263, 1353, 1369, 1419
AhdI GACNNNNNGTC 1 cut(s) 199
AjnI CCWGG 4 cut(s) 9, 36, 129, 371
Alw21I GWGCWC 3 cut(s) 599, 684, 831
Alw26I GTCTC 3 cut(s) 349, 626, 1017
AlwI GGATC 2 cut(s) 777, 1478
AlwNI CAGNNNCTG 2 cut(s) 328, 1176
Ama87I CYCGRG 1 cut(s) 208
Aor13HI TCCGGA 1 cut(s) 1015
AoxI GGCC 9 cut(s) 64, 170, 374, 666, 856, 963, 968, 1026, 1269
AsiGI ACCGGT 1 cut(s) 280
AspLEI GCGC 2 cut(s) 118, 139
AspS9I GGNCC 5 cut(s) 109, 170, 175, 778, 968
AsuC2I CCSGG 7 cut(s) 197, 209, 210, 962, 967, 1140, 1384
AsuHPI GGTGA 7 cut(s) 76, 295, 593, 731, 856, 931, 1295
AsuII TTCGAA 1 cut(s) 1099
AsuNHI GCTAGC 1 cut(s) 506
AvaI CYCGRG 1 cut(s) 208
AvaII GGWCC 3 cut(s) 109, 175, 778
BalI TGGCCA 1 cut(s) 668
BanII GRGCYC 4 cut(s) 192, 372, 684, 831
BauI CACGAG 1 cut(s) 365
BbsI GAAGAC 3 cut(s) 21, 1380, 1407
Bbv12I GWGCWC 3 cut(s) 599, 684, 831
BbvCI CCTCAGC 1 cut(s) 418
BccI CCATC 5 cut(s) 662, 707, 744, 841, 1495
BceAI ACGGC 4 cut(s) 79, 407, 1013, 1284
BcgI CGANNNNNNTGC 2 cut(s) 740, 774
BciT130I CCWGG 4 cut(s) 11, 38, 131, 373
BclI TGATCA 1 cut(s) 1291
BcnI CCSGG 7 cut(s) 197, 209, 210, 962, 967, 1140, 1384
BcoDI GTCTC 3 cut(s) 349, 626, 1017
BfaI CTAG 4 cut(s) 456, 507, 773, 1519
BfmI CTRYAG 1 cut(s) 320
BfuAI ACCTGC 3 cut(s) 210, 262, 331
BglII AGATCT 2 cut(s) 26, 458
Bme18I GGWCC 3 cut(s) 109, 175, 778
BmeRI GACNNNNNGTC 1 cut(s) 199
BmeT110I CYCGRG 1 cut(s) 208
BmgT120I GGNCC 5 cut(s) 109, 170, 175, 778, 968
BmiI GGNNCC 2 cut(s) 143, 177
BmsI GCATC 3 cut(s) 135, 708, 1456
BmtI GCTAGC 1 cut(s) 510
BpiI GAAGAC 3 cut(s) 21, 1380, 1407
Bpu10I CCTNAGC 2 cut(s) 418, 1169
Bpu14I TTCGAA 1 cut(s) 1099
BpuEI CTTGAG 1 cut(s) 1202
BpuMI CCSGG 7 cut(s) 197, 209, 210, 962, 967, 1140, 1384
BsaBI GATNNNNATC 1 cut(s) 1440
BsaHI GRCGYC 3 cut(s) 81, 242, 524
BsaI GGTCTC 2 cut(s) 349, 626
BsaJI CCNNGG 5 cut(s) 36, 207, 208, 209, 371
BsaWI WCCGGW 2 cut(s) 280, 1015
BsaXI ACNNNNNCTCC 2 cut(s) 1490, 1520
Bsc4I CCNNNNNNNGG 9 cut(s) 184, 185, 383, 631, 754, 865, 916, 1111, 1345
Bse118I RCCGGY 1 cut(s) 280
Bse3DI GCAATG 3 cut(s) 409, 482, 993
Bse8I GATNNNNATC 1 cut(s) 1440
BseAI TCCGGA 1 cut(s) 1015
BseBI CCWGG 4 cut(s) 11, 38, 131, 373
BseDI CCNNGG 5 cut(s) 36, 207, 208, 209, 371
BseGI GGATG 4 cut(s) 126, 203, 264, 826
BseJI GATNNNNATC 1 cut(s) 1440
BseLI CCNNNNNNNGG 9 cut(s) 184, 185, 383, 631, 754, 865, 916, 1111, 1345
BseMI GCAATG 3 cut(s) 409, 482, 993
BseMII CTCAG 5 cut(s) 14, 371, 432, 506, 1183
BseRI GAGGAG 3 cut(s) 267, 814, 1386
BseX3I CGGCCG 1 cut(s) 963
BsgI GTGCAG 1 cut(s) 238
Bsh1236I CGCG 2 cut(s) 139, 1216
Bsh1285I CGRYCG 2 cut(s) 294, 966
BshFI GGCC 9 cut(s) 66, 172, 376, 668, 858, 965, 970, 1028, 1271
BshTI ACCGGT 1 cut(s) 280
BsiEI CGRYCG 2 cut(s) 294, 966
BsiHKAI GWGCWC 3 cut(s) 599, 684, 831
BsiHKCI CYCGRG 1 cut(s) 208
BslFI GGGAC 1 cut(s) 19
BslI CCNNNNNNNGG 9 cut(s) 184, 185, 383, 631, 754, 865, 916, 1111, 1345
BsmAI GTCTC 3 cut(s) 349, 626, 1017
BsmFI GGGAC 1 cut(s) 19
BsnI GGCC 9 cut(s) 66, 172, 376, 668, 858, 965, 970, 1028, 1271
Bso31I GGTCTC 2 cut(s) 349, 626
BsoBI CYCGRG 1 cut(s) 208
Bsp119I TTCGAA 1 cut(s) 1099
Bsp1286I GDGCHC 5 cut(s) 192, 372, 599, 684, 831
Bsp13I TCCGGA 1 cut(s) 1015
Bsp1407I TGTACA 1 cut(s) 330
Bsp143I GATC 8 cut(s) 26, 427, 458, 769, 1291, 1300, 1435, 1483
Bsp68I TCGCGA 1 cut(s) 1216
BspANI GGCC 9 cut(s) 66, 172, 376, 668, 858, 965, 970, 1028, 1271
BspCNI CTCAG 5 cut(s) 15, 370, 431, 505, 1182
BspEI TCCGGA 1 cut(s) 1015
BspFNI CGCG 2 cut(s) 139, 1216
BspLI GGNNCC 2 cut(s) 143, 177
BspMAI CTGCAG 1 cut(s) 324
BspMI ACCTGC 3 cut(s) 210, 262, 331
BspOI GCTAGC 1 cut(s) 510
BspPI GGATC 2 cut(s) 777, 1478
BspQI GCTCTTC 1 cut(s) 672
BspT104I TTCGAA 1 cut(s) 1099
BspTNI GGTCTC 2 cut(s) 349, 626
BsrBI CCGCTC 3 cut(s) 711, 988, 1394
BsrDI GCAATG 3 cut(s) 409, 482, 993
BsrFI RCCGGY 1 cut(s) 280
BsrGI TGTACA 1 cut(s) 330
BssAI RCCGGY 1 cut(s) 280
BssECI CCNNGG 5 cut(s) 36, 207, 208, 209, 371
BssMI GATC 8 cut(s) 26, 427, 458, 769, 1291, 1300, 1435, 1483
BssNI GRCGYC 3 cut(s) 81, 242, 524
BssSI CACGAG 1 cut(s) 365
Bst2BI CACGAG 1 cut(s) 365
Bst2UI CCWGG 4 cut(s) 11, 38, 131, 373
Bst4CI ACNGT 3 cut(s) 383, 1069, 1466
Bst6I CTCTTC 2 cut(s) 152, 672
BstACI GRCGYC 3 cut(s) 81, 242, 524
BstAPI GCANNNNNTGC 1 cut(s) 574
BstAUI TGTACA 1 cut(s) 330
BstBI TTCGAA 1 cut(s) 1099
BstC8I GCNNGC 7 cut(s) 170, 269, 338, 508, 706, 972, 976
BstDEI CTNAG 5 cut(s) 23, 357, 418, 492, 1169
BstF5I GGATG 4 cut(s) 126, 203, 264, 826
BstFNI CGCG 2 cut(s) 139, 1216
BstHHI GCGC 2 cut(s) 118, 139
BstKTI GATC 8 cut(s) 29, 430, 461, 772, 1294, 1303, 1438, 1486
BstMAI GTCTC 3 cut(s) 349, 626, 1017
BstMBI GATC 8 cut(s) 26, 427, 458, 769, 1291, 1300, 1435, 1483
BstMCI CGRYCG 2 cut(s) 294, 966
BstMWI GCNNNNNNNGC 6 cut(s) 574, 835, 971, 1320, 1323, 1335
BstNI CCWGG 4 cut(s) 11, 38, 131, 373
BstNSI RCATGY 1 cut(s) 577
BstSFI CTRYAG 1 cut(s) 320
BstUI CGCG 2 cut(s) 139, 1216
BstV2I GAAGAC 3 cut(s) 21, 1380, 1407
BstX2I RGATCY 3 cut(s) 26, 458, 769
BstYI RGATCY 3 cut(s) 26, 458, 769
BstZI CGGCCG 1 cut(s) 963
BsuRI GGCC 9 cut(s) 66, 172, 376, 668, 858, 965, 970, 1028, 1271
BtgZI GCGATG 1 cut(s) 685
BtsCI GGATG 4 cut(s) 126, 203, 264, 826
BtsI GCAGTG 1 cut(s) 1324
BtsIMutI CAGTG 2 cut(s) 82, 1324
BtuMI TCGCGA 1 cut(s) 1216
BveI ACCTGC 3 cut(s) 210, 262, 331
Cac8I GCNNGC 7 cut(s) 170, 269, 338, 508, 706, 972, 976
CaiI CAGNNNCTG 2 cut(s) 328, 1176
CfoI GCGC 2 cut(s) 118, 139
Cfr10I RCCGGY 1 cut(s) 280
Cfr13I GGNCC 5 cut(s) 109, 170, 175, 778, 968
Cfr9I CCCGGG 1 cut(s) 208
CseI GACGC 2 cut(s) 513, 1156
Csp6I GTAC 6 cut(s) 228, 298, 331, 635, 1065, 1498
CspAI ACCGGT 1 cut(s) 280
CviAII CATG 7 cut(s) 113, 511, 574, 754, 1021, 1046, 1511
CviQI GTAC 6 cut(s) 228, 298, 331, 635, 1065, 1498
DdeI CTNAG 5 cut(s) 23, 357, 418, 492, 1169
DpnI GATC 8 cut(s) 28, 429, 460, 771, 1293, 1302, 1437, 1485
DpnII GATC 8 cut(s) 26, 427, 458, 769, 1291, 1300, 1435, 1483
DrdI GACNNNNNNGTC 1 cut(s) 1058
DriI GACNNNNNGTC 1 cut(s) 199
DseDI GACNNNNNNGTC 1 cut(s) 1058
EaeI YGGCCR 5 cut(s) 64, 666, 963, 1026, 1269
EagI CGGCCG 1 cut(s) 963
Eam1104I CTCTTC 2 cut(s) 152, 672
Eam1105I GACNNNNNGTC 1 cut(s) 199
EarI CTCTTC 2 cut(s) 152, 672
EciI GGCGGA 1 cut(s) 674
Ecl136II GAGCTC 2 cut(s) 682, 829
EclXI CGGCCG 1 cut(s) 963
Eco147I AGGCCT 2 cut(s) 376, 858
Eco24I GRGCYC 4 cut(s) 192, 372, 684, 831
Eco31I GGTCTC 2 cut(s) 349, 626
Eco47I GGWCC 3 cut(s) 109, 175, 778
Eco52I CGGCCG 1 cut(s) 963
Eco53kI GAGCTC 2 cut(s) 682, 829
Eco57I CTGAAG 2 cut(s) 58, 73
Eco88I CYCGRG 1 cut(s) 208
EcoICRI GAGCTC 2 cut(s) 682, 829
EcoRII CCWGG 4 cut(s) 9, 36, 129, 371
EcoT38I GRGCYC 4 cut(s) 192, 372, 684, 831
FaeI CATG 7 cut(s) 116, 514, 577, 757, 1024, 1049, 1514
FalI AAGNNNNNCTT 2 cut(s) 915, 947
FaqI GGGAC 1 cut(s) 19
FatI CATG 7 cut(s) 112, 510, 573, 753, 1020, 1045, 1510
FauI CCCGC 4 cut(s) 161, 329, 633, 993
FbaI TGATCA 1 cut(s) 1291
FblI GTMKAC 2 cut(s) 239, 1468
FokI GGATG 4 cut(s) 113, 190, 271, 833
FriOI GRGCYC 4 cut(s) 192, 372, 684, 831
FspAI RTGCGCAY 1 cut(s) 117
FspBI CTAG 4 cut(s) 456, 507, 773, 1519
FspI TGCGCA 1 cut(s) 117
GlaI GCGC 2 cut(s) 117, 138
HaeIII GGCC 9 cut(s) 66, 172, 376, 668, 858, 965, 970, 1028, 1271
HgaI GACGC 2 cut(s) 513, 1156
HhaI GCGC 2 cut(s) 118, 139
Hin1I GRCGYC 3 cut(s) 81, 242, 524
Hin1II CATG 7 cut(s) 116, 514, 577, 757, 1024, 1049, 1514
Hin6I GCGC 2 cut(s) 116, 137
HinP1I GCGC 2 cut(s) 116, 137
HincII GTYRAC 3 cut(s) 240, 955, 1072
HindII GTYRAC 3 cut(s) 240, 955, 1072
HindIII AAGCTT 2 cut(s) 836, 924
HinfI GANTC 7 cut(s) 17, 49, 787, 812, 1077, 1349, 1369
HpaI GTTAAC 1 cut(s) 955
HphI GGTGA 7 cut(s) 76, 295, 593, 731, 856, 931, 1295
Hpy166II GTNNAC 5 cut(s) 240, 286, 955, 1072, 1469
Hpy188I TCNGA 7 cut(s) 24, 360, 495, 820, 941, 1003, 1114
Hpy8I GTNNAC 5 cut(s) 240, 286, 955, 1072, 1469
Hpy99I CGWCG 7 cut(s) 235, 238, 241, 244, 428, 662, 795
HpyAV CCTTC 6 cut(s) 82, 97, 192, 659, 848, 1217
HpyCH4III ACNGT 3 cut(s) 383, 1069, 1466
HpyCH4IV ACGT 5 cut(s) 81, 230, 242, 593, 660
HpyCH4V TGCA 7 cut(s) 126, 219, 322, 414, 482, 577, 1238
HpyF10VI GCNNNNNNNGC 6 cut(s) 574, 835, 971, 1320, 1323, 1335
HpyF3I CTNAG 5 cut(s) 23, 357, 418, 492, 1169
HpySE526I ACGT 5 cut(s) 81, 230, 242, 593, 660
Hsp92I GRCGYC 3 cut(s) 81, 242, 524
Hsp92II CATG 7 cut(s) 116, 514, 577, 757, 1024, 1049, 1514
HspAI GCGC 2 cut(s) 116, 137
Kpn2I TCCGGA 1 cut(s) 1015
Ksp22I TGATCA 1 cut(s) 1291
KspAI GTTAAC 1 cut(s) 955
Kzo9I GATC 8 cut(s) 26, 427, 458, 769, 1291, 1300, 1435, 1483
LguI GCTCTTC 1 cut(s) 672
LmnI GCTCC 5 cut(s) 141, 687, 941, 993, 1399
LweI GCATC 3 cut(s) 135, 708, 1456
MaeI CTAG 4 cut(s) 456, 507, 773, 1519
MaeII ACGT 5 cut(s) 81, 230, 242, 593, 660
MaeIII GTNAC 4 cut(s) 77, 82, 243, 1078
MalI GATC 8 cut(s) 28, 429, 460, 771, 1293, 1302, 1437, 1485
MbiI CCGCTC 3 cut(s) 711, 988, 1394
MboI GATC 8 cut(s) 26, 427, 458, 769, 1291, 1300, 1435, 1483
MfeI CAATTG 2 cut(s) 500, 528
MflI RGATCY 3 cut(s) 26, 458, 769
MhlI GDGCHC 5 cut(s) 192, 372, 599, 684, 831
MlsI TGGCCA 1 cut(s) 668
MluCI AATT 4 cut(s) 500, 528, 1243, 1255
MluNI TGGCCA 1 cut(s) 668
MlyI GAGTC 3 cut(s) 11, 806, 1086
Mox20I TGGCCA 1 cut(s) 668
MroI TCCGGA 1 cut(s) 1015
MscI TGGCCA 1 cut(s) 668
MseI TTAA 2 cut(s) 954, 1341
MslI CAYNNNNRTG 1 cut(s) 1509
Msp20I TGGCCA 1 cut(s) 668
MspA1I CMGCKG 3 cut(s) 336, 974, 1314
MunI CAATTG 2 cut(s) 500, 528
MvaI CCWGG 4 cut(s) 11, 38, 131, 373
MvnI CGCG 2 cut(s) 139, 1216
MwoI GCNNNNNNNGC 6 cut(s) 574, 835, 971, 1320, 1323, 1335
NciI CCSGG 7 cut(s) 197, 209, 210, 962, 967, 1140, 1384
NdeII GATC 8 cut(s) 26, 427, 458, 769, 1291, 1300, 1435, 1483
NheI GCTAGC 1 cut(s) 506
NlaIII CATG 7 cut(s) 116, 514, 577, 757, 1024, 1049, 1514
NlaIV GGNNCC 2 cut(s) 143, 177
NmeAIII GCCGAG 1 cut(s) 935
NmuCI GTSAC 4 cut(s) 77, 82, 243, 1078
NruI TCGCGA 1 cut(s) 1216
NsbI TGCGCA 1 cut(s) 117
NspI RCATGY 1 cut(s) 577
NspV TTCGAA 1 cut(s) 1099
PceI AGGCCT 2 cut(s) 376, 858
PciSI GCTCTTC 1 cut(s) 672
PcsI WCGNNNNNNNCGW 4 cut(s) 230, 236, 239, 945
PfeI GAWTC 4 cut(s) 49, 787, 1349, 1369
PflFI GACNNNGTC 1 cut(s) 1076
PflMI CCANNNNNTGG 1 cut(s) 754
PfoI TCCNGGA 1 cut(s) 1138
PinAI ACCGGT 1 cut(s) 280
PleI GAGTC 3 cut(s) 11, 806, 1085
PpsI GAGTC 3 cut(s) 11, 806, 1085
Psp124BI GAGCTC 2 cut(s) 684, 831
Psp6I CCWGG 4 cut(s) 9, 36, 129, 371
PspGI CCWGG 4 cut(s) 9, 36, 129, 371
PspN4I GGNNCC 2 cut(s) 143, 177
PspPI GGNCC 5 cut(s) 109, 170, 175, 778, 968
PsrI GAACNNNNNNTAC 2 cut(s) 290, 322
PstI CTGCAG 1 cut(s) 324
PstNI CAGNNNCTG 2 cut(s) 328, 1176
PsuI RGATCY 3 cut(s) 26, 458, 769
PsyI GACNNNGTC 1 cut(s) 1076
PvuII CAGCTG 1 cut(s) 974
RruI TCGCGA 1 cut(s) 1216
RsaI GTAC 6 cut(s) 229, 299, 332, 636, 1066, 1499
RsaNI GTAC 6 cut(s) 228, 298, 331, 635, 1065, 1498
RseI CAYNNNNRTG 1 cut(s) 1509
SacI GAGCTC 2 cut(s) 684, 831
SalI GTCGAC 1 cut(s) 238
SapI GCTCTTC 1 cut(s) 672
SaqAI TTAA 2 cut(s) 954, 1341
Sau3AI GATC 8 cut(s) 26, 427, 458, 769, 1291, 1300, 1435, 1483
Sau96I GGNCC 5 cut(s) 109, 170, 175, 778, 968
SchI GAGTC 3 cut(s) 11, 806, 1086
SduI GDGCHC 5 cut(s) 192, 372, 599, 684, 831
SfaNI GCATC 3 cut(s) 135, 708, 1456
SfcI CTRYAG 1 cut(s) 320
SfuI TTCGAA 1 cut(s) 1099
SgrDI CGTCGACG 1 cut(s) 238
SinI GGWCC 3 cut(s) 109, 175, 778
SmaI CCCGGG 1 cut(s) 210
SmiMI CAYNNNNRTG 1 cut(s) 1509
SmlI CTYRAG 1 cut(s) 1181
SmoI CTYRAG 1 cut(s) 1181
Sse9I AATT 4 cut(s) 500, 528, 1243, 1255
SseBI AGGCCT 2 cut(s) 376, 858
SspI AATATT 1 cut(s) 1333
SspMI CTAG 4 cut(s) 456, 507, 773, 1519
SstI GAGCTC 2 cut(s) 684, 831
StuI AGGCCT 2 cut(s) 376, 858
TaaI ACNGT 3 cut(s) 383, 1069, 1466
TaiI ACGT 5 cut(s) 84, 233, 245, 596, 663
TaqII GACCGA 1 cut(s) 280
TasI AATT 4 cut(s) 500, 528, 1243, 1255
TatI WGTACW 1 cut(s) 330
TauI GCSGC 5 cut(s) 452, 455, 711, 1317, 1326
TfiI GAWTC 4 cut(s) 49, 787, 1349, 1369
Tru1I TTAA 2 cut(s) 954, 1341
Tru9I TTAA 2 cut(s) 954, 1341
TscAI CASTG 2 cut(s) 82, 1324
TseFI GTSAC 4 cut(s) 77, 82, 243, 1078
Tsp45I GTSAC 4 cut(s) 77, 82, 243, 1078
TspDTI ATGAA 1 cut(s) 557
TspGWI ACGGA 2 cut(s) 1052, 1089
TspMI CCCGGG 1 cut(s) 208
TspRI CASTG 2 cut(s) 82, 1324
Tth111I GACNNNGTC 1 cut(s) 1076
Van91I CCANNNNNTGG 1 cut(s) 754
VpaK11BI GGWCC 3 cut(s) 109, 175, 778
XbaI TCTAGA 1 cut(s) 772
XceI RCATGY 1 cut(s) 577
XcmI CCANNNNNNNNNTGG 1 cut(s) 661
XmaI CCCGGG 1 cut(s) 208
XmiI GTMKAC 2 cut(s) 239, 1468
XspI CTAG 4 cut(s) 456, 507, 773, 1519
ZraI GACGTC 2 cut(s) 82, 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.