Rmu_sc0005075.1_g000013

Regulatory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005075.1
OG0012041
Physical Location & Seq
Forward (+)
86623 .. 89724
3102 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005075.1_g000013.1.cds

Sequence Viewer

Length: 1923 bp
atggctacttctcacgaagaatctccggagacccaaaacccactcatagacgacgtcgtagacagcgccgctgactacaaaggccatccagtccacagatccacctccggcggttggcgttccgcatccttcataataggggtggaagttgctgagaggttcgcgtactatgggattagctctaatctgataacgtttctgacgggaccgttgggacagtcgacggtgacggcggcagagaatgtgaacatatggtccggaacggcgcagttgcttcctctgttgggagcattcgtggcggattcttttctgggtcgctatcgcaccattattgttgcttctctcctctacattttgaattcaaaatcgccagaaacccagctaagctccgtggatccatcaatcatgagcagcctggaagactcttttagatctctgtccctagactacctcaatctcctcatcaacggccaagccttcagtgatgtcaccttcagcgtggagggtcgtctggttcacgcgcacaggtgcatcctggctgcccggagcctcttcttccggaagttcttctgcgggccggaccctccttctgggcttgacccggtgtcgtcgcctgggtcgtgcaggtcgggtacgtcgtcgtcgacgtcacagagagggatgagcaattcgcaggtaataccggtgaactcggtcgggtacgaggtgttcttgttgctgctgcagtttttgtacagcggacaggtctcgatagtgcctcagaaacatgagccaaggcctaattgtggggagaggggctgttggcacacgcattgcacctcagccgtcgatctcgcccttgacactctcgccgccgctagatcgtttggtgtagaacaacttgcattgctcactcagaagcaattggctagcatggtggaaaaggcgtcgattgatgatgtgatgaaagtgctattagcttccagaaagcaggacatgcaccaactctggacaacgtgttctcaccttgttgccaaatctggtctcccgccggaggtgctcgccaagcaccttcccatcgacgtagtggccaaaatcgaagagctccgcctcaaatcctccatcgcacgccgctcaatgatgccccatcaccaccaccaccaccaccaccaccacgacatgggtgctgctgcggatctcgaggaccagaagattcgtcgaatgaggcgagcattggactcatcggatgtagagctggtcaagctcatggtgatgggagaaggcctaaatctggacgaggcactggcattacactatgctgtcgaaagttgtagccgagaggtagtgaaagctttgcttgaactcggagcagccgatgttaactacccggctgggccagctggcaaaaccccactccacattgcctctgaaatggtgtctccggacatggtggccgtgctcctcgatcaccatgctgaccccaatgtccgaaccgtcgacggagtcactccactcgatgtgcttcgaaccctaacatcggattttctcttcaaaggagctgttcccggactgacgcacatcgaacccaacaagctcaggctctgccttgaacttgttcaatcggctgctcttgttctttcgcgcgaagaaggcaataacaatgcaaacaattctgcttctaattcttcgaatacggccatctatccaccgatgagtgaccatcacgatcatcatagcagcggcagtggcggcagcaatattagccttaacttggattcgagattggtgtatttgaatcttggggcaactgggtcatccacggctcaaaatcaaatgggctcttcgagaatggatagtgaagatcatcaacatcatcatcattctcatggtagacaaggtggctgtgatccatcaacaatgtaccaccaatcccatgacttctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003002 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009798 GO:0009838 GO:0009864 GO:0009867 GO:0009888 GO:0009908 GO:0009943 GO:0009944 GO:0009954 GO:0009955 GO:0009965 GO:0009987 GO:0010016 GO:0010022 GO:0010033 GO:0010073 GO:0010227 GO:0010254 GO:0010432 GO:0010433 GO:0010434 GO:0010498 GO:0010582 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0022414 GO:0023052 GO:0030162 GO:0030163 GO:0031347 GO:0031349 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0048366 GO:0048367 GO:0048437 GO:0048439 GO:0048507 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090567 GO:0090698 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1905392 GO:1905393 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank_2 Ank_3 BTB DUF3420

Protein Analysis

640

Amino Acids

69.55

Weight (kDa)

6.07

Isoelectric Point (pI)

48.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41370 AT3G57130
fragaria_vesca FvH4_6g25090
malus_domestica MD12G1091100.v1.1 MD14G1083700.v1.1
prunus_persica Prupe.7G046800_v2.0.a1
pyrus_communis pycom12g07650 pycom14g07290
rosa_chinensis RchiOBHm_Chr2g0124891
rosa_laevigata RLG00000018831
rosa_multiflora Rmu_sc0005075.1_g000013
rosa_roxburghii Rroxscaffold_2G00119550
rosa_rugosa Rorug02G0253100
rosa_samantha Rh2AG312800 Rh2BG321000 Rh2CG302300 Rh2DG338400
rosa_wichuraiana Rw0G021780 Rw2G025260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1463
AatII GACGTC 2 cut(s) 57, 650
Acc36I ACCTGC 2 cut(s) 615, 664
AccB7I CCANNNNNTGG 1 cut(s) 1159
AccBSI CCGCTC 1 cut(s) 1113
AccI GTMKAC 5 cut(s) 60, 221, 644, 1476, 1870
AccII CGCG 4 cut(s) 164, 521, 1621, 1623
AccIII TCCGGA 4 cut(s) 25, 257, 558, 1420
AclI AACGTT 1 cut(s) 194
AclWI GGATC 5 cut(s) 93, 389, 402, 1182, 1880
AcoI YGGCCR 4 cut(s) 469, 1068, 1431, 1674
AcsI RAATTY 1 cut(s) 358
AcuI CTGAAG 2 cut(s) 463, 478
AcyI GRCGYC 3 cut(s) 54, 647, 926
AfaI GTAC 5 cut(s) 167, 634, 701, 734, 1901
AfiI CCNNNNNNNGG 9 cut(s) 114, 284, 590, 785, 1033, 1159, 1270, 1516, 1750
AflIII ACRYGT 1 cut(s) 995
AgeI ACCGGT 1 cut(s) 682
AgsI TTSAA 7 cut(s) 358, 363, 1340, 1531, 1589, 1598, 1774
AhdI GACNNNNNGTC 1 cut(s) 604
AjnI CCWGG 3 cut(s) 414, 534, 613
AloI GAACNNNNNNTCC 4 cut(s) 239, 271, 982, 1014
Alw21I GWGCWC 3 cut(s) 1041, 1086, 1440
Alw26I GTCTC 4 cut(s) 23, 751, 1028, 1422
AlwI GGATC 5 cut(s) 93, 389, 402, 1182, 1880
AlwNI CAGNNNCTG 1 cut(s) 1581
Ama87I CYCGRG 1 cut(s) 1178
Aor13HI TCCGGA 4 cut(s) 25, 257, 558, 1420
AoxI GGCC 9 cut(s) 82, 469, 575, 776, 1068, 1261, 1373, 1431, 1674
ApoI RAATTY 1 cut(s) 358
AsiGI ACCGGT 1 cut(s) 682
Asp700I GAANNNNTTC 2 cut(s) 566, 1593
AspLEI GCGC 4 cut(s) 68, 268, 523, 1623
AspS9I GGNCC 6 cut(s) 206, 255, 575, 580, 1183, 1373
AsuC2I CCSGG 4 cut(s) 544, 602, 1367, 1545
AsuHPI GGTGA 7 cut(s) 238, 481, 697, 995, 1121, 1261, 1439
AsuII TTCGAA 2 cut(s) 1504, 1667
AsuNHI GCTAGC 1 cut(s) 908
AvaI CYCGRG 1 cut(s) 1178
AvaII GGWCC 4 cut(s) 206, 255, 580, 1183
BalI TGGCCA 1 cut(s) 1070
BamHI GGATCC 1 cut(s) 394
BanII GRGCYC 2 cut(s) 1086, 1820
BbsI GAAGAC 1 cut(s) 426
Bbv12I GWGCWC 3 cut(s) 1041, 1086, 1440
BbvCI CCTCAGC 1 cut(s) 820
BccI CCATC 9 cut(s) 93, 406, 1064, 1109, 1134, 1246, 1685, 1707, 1897
BceAI ACGGC 7 cut(s) 246, 279, 484, 809, 1418, 1689, 1815
BcgI CGANNNNNNTGC 4 cut(s) 1145, 1179, 1433, 1467
BciT130I CCWGG 3 cut(s) 416, 536, 615
BcnI CCSGG 4 cut(s) 544, 602, 1367, 1545
BcoDI GTCTC 4 cut(s) 23, 751, 1028, 1422
BfaI CTAG 4 cut(s) 443, 858, 909, 1921
BfmI CTRYAG 1 cut(s) 722
BfoI RGCGCY 1 cut(s) 69
BfuAI ACCTGC 2 cut(s) 615, 664
BglII AGATCT 1 cut(s) 431
BlpI GCTNAGC 1 cut(s) 383
Bme1390I CCNGG 7 cut(s) 416, 536, 544, 602, 615, 1367, 1545
Bme18I GGWCC 4 cut(s) 206, 255, 580, 1183
BmeRI GACNNNNNGTC 1 cut(s) 604
BmeT110I CYCGRG 1 cut(s) 1178
BmgT120I GGNCC 6 cut(s) 206, 255, 575, 580, 1183, 1373
BmiI GGNNCC 4 cut(s) 207, 396, 548, 582
BmrFI CCNGG 7 cut(s) 416, 536, 544, 602, 615, 1367, 1545
BmrI ACTGGG 1 cut(s) 1797
BmsI GCATC 3 cut(s) 134, 540, 1110
BmtI GCTAGC 1 cut(s) 912
BmuI ACTGGG 1 cut(s) 1797
BpiI GAAGAC 1 cut(s) 426
Bpu10I CCTNAGC 2 cut(s) 820, 1574
Bpu1102I GCTNAGC 1 cut(s) 383
Bpu14I TTCGAA 2 cut(s) 1504, 1667
BpuMI CCSGG 4 cut(s) 544, 602, 1367, 1545
BsaHI GRCGYC 3 cut(s) 54, 647, 926
BsaI GGTCTC 3 cut(s) 23, 751, 1028
BsaJI CCNNGG 4 cut(s) 390, 614, 773, 1797
BsaWI WCCGGW 5 cut(s) 25, 257, 558, 682, 1420
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bsc4I CCNNNNNNNGG 9 cut(s) 114, 284, 590, 785, 1033, 1159, 1270, 1516, 1750
Bse118I RCCGGY 1 cut(s) 682
Bse1I ACTGG 3 cut(s) 89, 1287, 1792
Bse3DI GCAATG 3 cut(s) 811, 884, 1398
BseAI TCCGGA 4 cut(s) 25, 257, 558, 1420
BseBI CCWGG 3 cut(s) 416, 536, 615
BseDI CCNNGG 4 cut(s) 390, 614, 773, 1797
BseGI GGATG 6 cut(s) 85, 125, 531, 666, 1231, 1793
BseLI CCNNNNNNNGG 9 cut(s) 114, 284, 590, 785, 1033, 1159, 1270, 1516, 1750
BseMI GCAATG 3 cut(s) 811, 884, 1398
BseMII CTCAG 5 cut(s) 144, 773, 834, 908, 1588
BseNI ACTGG 3 cut(s) 89, 1287, 1792
BseRI GAGGAG 3 cut(s) 335, 449, 1430
BseYI CCCAGC 2 cut(s) 378, 1370
BsgI GTGCAG 1 cut(s) 643
Bsh1236I CGCG 4 cut(s) 164, 521, 1621, 1623
Bsh1285I CGRYCG 1 cut(s) 696
BshFI GGCC 9 cut(s) 84, 471, 577, 778, 1070, 1263, 1375, 1433, 1676
BshTI ACCGGT 1 cut(s) 682
BsiEI CGRYCG 1 cut(s) 696
BsiHKAI GWGCWC 3 cut(s) 1041, 1086, 1440
BsiHKCI CYCGRG 1 cut(s) 1178
BslFI GGGAC 3 cut(s) 219, 228, 424
BslI CCNNNNNNNGG 9 cut(s) 114, 284, 590, 785, 1033, 1159, 1270, 1516, 1750
BsmAI GTCTC 4 cut(s) 23, 751, 1028, 1422
BsmFI GGGAC 3 cut(s) 219, 228, 424
BsmI GAATGC 1 cut(s) 290
BsnI GGCC 9 cut(s) 84, 471, 577, 778, 1070, 1263, 1375, 1433, 1676
Bso31I GGTCTC 3 cut(s) 23, 751, 1028
BsoBI CYCGRG 1 cut(s) 1178
Bsp119I TTCGAA 2 cut(s) 1504, 1667
Bsp1286I GDGCHC 4 cut(s) 1041, 1086, 1440, 1820
Bsp13I TCCGGA 4 cut(s) 25, 257, 558, 1420
Bsp1407I TGTACA 1 cut(s) 732
Bsp1720I GCTNAGC 1 cut(s) 383
BspANI GGCC 9 cut(s) 84, 471, 577, 778, 1070, 1263, 1375, 1433, 1676
BspCNI CTCAG 5 cut(s) 145, 772, 833, 907, 1587
BspEI TCCGGA 4 cut(s) 25, 257, 558, 1420
BspFNI CGCG 4 cut(s) 164, 521, 1621, 1623
BspHI TCATGA 1 cut(s) 405
BspLI GGNNCC 4 cut(s) 207, 396, 548, 582
BspMAI CTGCAG 1 cut(s) 726
BspMI ACCTGC 2 cut(s) 615, 664
BspOI GCTAGC 1 cut(s) 912
BspPI GGATC 5 cut(s) 93, 389, 402, 1182, 1880
BspQI GCTCTTC 2 cut(s) 1074, 1825
BspT104I TTCGAA 2 cut(s) 1504, 1667
BspTNI GGTCTC 3 cut(s) 23, 751, 1028
BsrBI CCGCTC 1 cut(s) 1113
BsrDI GCAATG 3 cut(s) 811, 884, 1398
BsrFI RCCGGY 1 cut(s) 682
BsrGI TGTACA 1 cut(s) 732
BsrI ACTGG 3 cut(s) 89, 1287, 1792
BssAI RCCGGY 1 cut(s) 682
BssECI CCNNGG 4 cut(s) 390, 614, 773, 1797
BssNI GRCGYC 3 cut(s) 54, 647, 926
BssT1I CCWWGG 1 cut(s) 773
Bst2UI CCWGG 3 cut(s) 416, 536, 615
Bst4CI ACNGT 4 cut(s) 210, 219, 226, 1474
Bst6I CTCTTC 4 cut(s) 557, 1074, 1532, 1825
BstACI GRCGYC 3 cut(s) 54, 647, 926
BstAPI GCANNNNNTGC 1 cut(s) 976
BstAUI TGTACA 1 cut(s) 732
BstBI TTCGAA 2 cut(s) 1504, 1667
BstC8I GCNNGC 7 cut(s) 575, 910, 1041, 1108, 1209, 1377, 1381
BstDEI CTNAG 6 cut(s) 153, 383, 759, 820, 894, 1574
BstDSI CCRYGG 2 cut(s) 390, 1797
BstF5I GGATG 6 cut(s) 85, 125, 531, 666, 1231, 1793
BstFNI CGCG 4 cut(s) 164, 521, 1621, 1623
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 4 cut(s) 68, 268, 523, 1623
BstMAI GTCTC 4 cut(s) 23, 751, 1028, 1422
BstMCI CGRYCG 1 cut(s) 696
BstNI CCWGG 3 cut(s) 416, 536, 615
BstNSI RCATGY 1 cut(s) 979
BstSCI CCNGG 7 cut(s) 414, 534, 542, 600, 613, 1365, 1543
BstSFI CTRYAG 1 cut(s) 722
BstUI CGCG 4 cut(s) 164, 521, 1621, 1623
BstV2I GAAGAC 1 cut(s) 426
BstX2I RGATCY 4 cut(s) 98, 394, 431, 1174
BstYI RGATCY 4 cut(s) 98, 394, 431, 1174
BsuRI GGCC 9 cut(s) 84, 471, 577, 778, 1070, 1263, 1375, 1433, 1676
BtgI CCRYGG 2 cut(s) 390, 1797
BtgZI GCGATG 1 cut(s) 1087
BtsCI GGATG 6 cut(s) 85, 125, 531, 666, 1231, 1793
BtsI GCAGTG 1 cut(s) 1729
BtsIMutI CAGTG 3 cut(s) 487, 1280, 1729
BveI ACCTGC 2 cut(s) 615, 664
Cac8I GCNNGC 7 cut(s) 575, 910, 1041, 1108, 1209, 1377, 1381
CaiI CAGNNNCTG 1 cut(s) 1581
CciI TCATGA 1 cut(s) 405
CfoI GCGC 4 cut(s) 68, 268, 523, 1623
Cfr10I RCCGGY 1 cut(s) 682
Cfr13I GGNCC 6 cut(s) 206, 255, 575, 580, 1183, 1373
CseI GACGC 2 cut(s) 915, 1561
Csp6I GTAC 5 cut(s) 166, 633, 700, 733, 1900
CspAI ACCGGT 1 cut(s) 682
CviQI GTAC 5 cut(s) 166, 633, 700, 733, 1900
DdeI CTNAG 6 cut(s) 153, 383, 759, 820, 894, 1574
DrdI GACNNNNNNGTC 1 cut(s) 1463
DriI GACNNNNNGTC 1 cut(s) 604
DseDI GACNNNNNNGTC 1 cut(s) 1463
EaeI YGGCCR 4 cut(s) 469, 1068, 1431, 1674
Eam1104I CTCTTC 4 cut(s) 557, 1074, 1532, 1825
Eam1105I GACNNNNNGTC 1 cut(s) 604
EarI CTCTTC 4 cut(s) 557, 1074, 1532, 1825
EciI GGCGGA 2 cut(s) 314, 1076
Ecl136II GAGCTC 1 cut(s) 1084
Eco130I CCWWGG 1 cut(s) 773
Eco147I AGGCCT 2 cut(s) 778, 1263
Eco24I GRGCYC 2 cut(s) 1086, 1820
Eco31I GGTCTC 3 cut(s) 23, 751, 1028
Eco47I GGWCC 4 cut(s) 206, 255, 580, 1183
Eco53kI GAGCTC 1 cut(s) 1084
Eco57I CTGAAG 2 cut(s) 463, 478
Eco88I CYCGRG 1 cut(s) 1178
EcoICRI GAGCTC 1 cut(s) 1084
EcoRI GAATTC 1 cut(s) 358
EcoRII CCWGG 3 cut(s) 414, 534, 613
EcoT14I CCWWGG 1 cut(s) 773
EcoT38I GRGCYC 2 cut(s) 1086, 1820
ErhI CCWWGG 1 cut(s) 773
FalI AAGNNNNNCTT 2 cut(s) 1320, 1352
FaqI GGGAC 3 cut(s) 219, 228, 424
FauI CCCGC 2 cut(s) 566, 1035
FauNDI CATATG 1 cut(s) 251
FblI GTMKAC 5 cut(s) 60, 221, 644, 1476, 1870
FokI GGATG 6 cut(s) 72, 112, 518, 673, 1238, 1780
FriOI GRGCYC 2 cut(s) 1086, 1820
FspBI CTAG 4 cut(s) 443, 858, 909, 1921
GlaI GCGC 4 cut(s) 67, 267, 522, 1622
GsaI CCCAGC 2 cut(s) 382, 1374
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 9 cut(s) 84, 471, 577, 778, 1070, 1263, 1375, 1433, 1676
HgaI GACGC 2 cut(s) 915, 1561
HhaI GCGC 4 cut(s) 68, 268, 523, 1623
Hin1I GRCGYC 3 cut(s) 54, 647, 926
Hin6I GCGC 4 cut(s) 66, 266, 521, 1621
HinP1I GCGC 4 cut(s) 66, 266, 521, 1621
HincII GTYRAC 4 cut(s) 222, 645, 1360, 1477
HindII GTYRAC 4 cut(s) 222, 645, 1360, 1477
HindIII AAGCTT 1 cut(s) 1329
HinfI GANTC 8 cut(s) 20, 302, 422, 1192, 1217, 1482, 1754, 1774
HpaI GTTAAC 1 cut(s) 1360
HphI GGTGA 7 cut(s) 238, 481, 697, 995, 1121, 1261, 1439
Hpy188I TCNGA 9 cut(s) 189, 201, 762, 897, 1225, 1346, 1408, 1469, 1519
HpyAV CCTTC 7 cut(s) 139, 487, 502, 597, 1061, 1253, 1622
HpyCH4III ACNGT 4 cut(s) 210, 219, 226, 1474
HpyCH4IV ACGT 6 cut(s) 54, 194, 635, 647, 995, 1062
HpyCH4V TGCA 7 cut(s) 531, 624, 724, 816, 884, 979, 1643
HpyF3I CTNAG 6 cut(s) 153, 383, 759, 820, 894, 1574
HpySE526I ACGT 6 cut(s) 54, 194, 635, 647, 995, 1062
Hsp92I GRCGYC 3 cut(s) 54, 647, 926
HspAI GCGC 4 cut(s) 66, 266, 521, 1621
Kpn2I TCCGGA 4 cut(s) 25, 257, 558, 1420
KspAI GTTAAC 1 cut(s) 1360
LguI GCTCTTC 2 cut(s) 1074, 1825
LmnI GCTCC 7 cut(s) 287, 392, 546, 1089, 1346, 1443, 1535
LweI GCATC 3 cut(s) 134, 540, 1110
MaeI CTAG 4 cut(s) 443, 858, 909, 1921
MaeII ACGT 6 cut(s) 54, 194, 635, 647, 995, 1062
MaeIII GTNAC 5 cut(s) 226, 487, 648, 1483, 1694
MbiI CCGCTC 1 cut(s) 1113
MfeI CAATTG 1 cut(s) 902
MflI RGATCY 4 cut(s) 98, 394, 431, 1174
MhlI GDGCHC 4 cut(s) 1041, 1086, 1440, 1820
MlsI TGGCCA 1 cut(s) 1070
MluCI AATT 6 cut(s) 358, 667, 781, 902, 1648, 1660
MluNI TGGCCA 1 cut(s) 1070
MlyI GAGTC 3 cut(s) 416, 1211, 1491
Mox20I TGGCCA 1 cut(s) 1070
MroI TCCGGA 4 cut(s) 25, 257, 558, 1420
MroXI GAANNNNTTC 2 cut(s) 566, 1593
MscI TGGCCA 1 cut(s) 1070
MseI TTAA 2 cut(s) 1359, 1746
MslI CAYNNNNRTG 2 cut(s) 1250, 1863
Msp20I TGGCCA 1 cut(s) 1070
MspA1I CMGCKG 4 cut(s) 71, 738, 1379, 1719
MspR9I CCNGG 7 cut(s) 416, 536, 544, 602, 615, 1367, 1545
MunI CAATTG 1 cut(s) 902
Mva1269I GAATGC 1 cut(s) 290
MvaI CCWGG 3 cut(s) 416, 536, 615
MvnI CGCG 4 cut(s) 164, 521, 1621, 1623
NciI CCSGG 4 cut(s) 544, 602, 1367, 1545
NdeI CATATG 1 cut(s) 251
NheI GCTAGC 1 cut(s) 908
NlaIV GGNNCC 4 cut(s) 207, 396, 548, 582
NmeAIII GCCGAG 1 cut(s) 1340
NmuCI GTSAC 5 cut(s) 226, 487, 648, 1483, 1694
NspI RCATGY 1 cut(s) 979
NspV TTCGAA 2 cut(s) 1504, 1667
PaeR7I CTCGAG 1 cut(s) 1178
PagI TCATGA 1 cut(s) 405
PceI AGGCCT 2 cut(s) 778, 1263
PciSI GCTCTTC 2 cut(s) 1074, 1825
PcsI WCGNNNNNNNCGW 6 cut(s) 617, 635, 641, 644, 1204, 1350
PctI GAATGC 1 cut(s) 290
PdmI GAANNNNTTC 2 cut(s) 566, 1593
PfeI GAWTC 5 cut(s) 20, 302, 1192, 1754, 1774
PflFI GACNNNGTC 2 cut(s) 53, 1481
PflMI CCANNNNNTGG 1 cut(s) 1159
PfoI TCCNGGA 1 cut(s) 1543
PinAI ACCGGT 1 cut(s) 682
PleI GAGTC 3 cut(s) 416, 1211, 1490
PpsI GAGTC 3 cut(s) 416, 1211, 1490
Psp124BI GAGCTC 1 cut(s) 1086
Psp1406I AACGTT 1 cut(s) 194
Psp6I CCWGG 3 cut(s) 414, 534, 613
PspFI CCCAGC 2 cut(s) 378, 1370
PspGI CCWGG 3 cut(s) 414, 534, 613
PspN4I GGNNCC 4 cut(s) 207, 396, 548, 582
PspPI GGNCC 6 cut(s) 206, 255, 575, 580, 1183, 1373
PsrI GAACNNNNNNTAC 2 cut(s) 692, 724
PstI CTGCAG 1 cut(s) 726
PstNI CAGNNNCTG 1 cut(s) 1581
PsuI RGATCY 4 cut(s) 98, 394, 431, 1174
PsyI GACNNNGTC 2 cut(s) 53, 1481
PvuII CAGCTG 1 cut(s) 1379
RsaI GTAC 5 cut(s) 167, 634, 701, 734, 1901
RsaNI GTAC 5 cut(s) 166, 633, 700, 733, 1900
RseI CAYNNNNRTG 2 cut(s) 1250, 1863
SacI GAGCTC 1 cut(s) 1086
SalI GTCGAC 3 cut(s) 220, 643, 1475
SapI GCTCTTC 2 cut(s) 1074, 1825
SaqAI TTAA 2 cut(s) 1359, 1746
Sau96I GGNCC 6 cut(s) 206, 255, 575, 580, 1183, 1373
SchI GAGTC 3 cut(s) 416, 1211, 1491
ScrFI CCNGG 7 cut(s) 416, 536, 544, 602, 615, 1367, 1545
SduI GDGCHC 4 cut(s) 1041, 1086, 1440, 1820
SfaNI GCATC 3 cut(s) 134, 540, 1110
SfcI CTRYAG 1 cut(s) 722
Sfr274I CTCGAG 1 cut(s) 1178
SfuI TTCGAA 2 cut(s) 1504, 1667
SgrDI CGTCGACG 2 cut(s) 643, 1475
SinI GGWCC 4 cut(s) 206, 255, 580, 1183
SlaI CTCGAG 1 cut(s) 1178
SmiMI CAYNNNNRTG 2 cut(s) 1250, 1863
SmlI CTYRAG 1 cut(s) 1178
SmoI CTYRAG 1 cut(s) 1178
Sse9I AATT 6 cut(s) 358, 667, 781, 902, 1648, 1660
SseBI AGGCCT 2 cut(s) 778, 1263
SspI AATATT 1 cut(s) 1738
SspMI CTAG 4 cut(s) 443, 858, 909, 1921
SstI GAGCTC 1 cut(s) 1086
StuI AGGCCT 2 cut(s) 778, 1263
StyD4I CCNGG 7 cut(s) 414, 534, 542, 600, 613, 1365, 1543
StyI CCWWGG 1 cut(s) 773
TaaI ACNGT 4 cut(s) 210, 219, 226, 1474
TaiI ACGT 6 cut(s) 57, 197, 638, 650, 998, 1065
TaqII GACCGA 1 cut(s) 682
TasI AATT 6 cut(s) 358, 667, 781, 902, 1648, 1660
TatI WGTACW 1 cut(s) 732
TauI GCSGC 7 cut(s) 71, 236, 854, 857, 1113, 1722, 1731
TfiI GAWTC 5 cut(s) 20, 302, 1192, 1754, 1774
Tru1I TTAA 2 cut(s) 1359, 1746
Tru9I TTAA 2 cut(s) 1359, 1746
TscAI CASTG 3 cut(s) 487, 1287, 1729
TseFI GTSAC 5 cut(s) 226, 487, 648, 1483, 1694
Tsp45I GTSAC 5 cut(s) 226, 487, 648, 1483, 1694
TspDTI ATGAA 2 cut(s) 121, 959
TspGWI ACGGA 2 cut(s) 379, 1494
TspRI CASTG 3 cut(s) 487, 1287, 1729
Tth111I GACNNNGTC 2 cut(s) 53, 1481
Van91I CCANNNNNTGG 1 cut(s) 1159
VpaK11BI GGWCC 4 cut(s) 206, 255, 580, 1183
XapI RAATTY 1 cut(s) 358
XceI RCATGY 1 cut(s) 979
XcmI CCANNNNNNNNNTGG 1 cut(s) 1063
XhoI CTCGAG 1 cut(s) 1178
XmiI GTMKAC 5 cut(s) 60, 221, 644, 1476, 1870
XmnI GAANNNNTTC 2 cut(s) 566, 1593
XspI CTAG 4 cut(s) 443, 858, 909, 1921
ZraI GACGTC 2 cut(s) 55, 648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.