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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41610 |
| fragaria_vesca | FvH4_7g18090 FvH4_7g18120 |
| prunus_persica | Prupe.2G203300_v2.0.a1 |
| pyrus_communis | pycom01g11750 |
| rosa_chinensis | RchiOBHm_Chr1g0361741 |
| rosa_laevigata | RLG00000027706 |
| rosa_multiflora | Rmu_sc0005733.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00294730 |
| rosa_rugosa | Rorug01G0291300 |
| rosa_samantha | Rh1AG301700 Rh1BG264400 Rh1CG283000 Rh1DG294400 |
| rosa_wichuraiana | Rw1G026730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 770 |
| Acc36I | ACCTGC | 1 cut(s) | 385 |
| AclI | AACGTT | 1 cut(s) | 647 |
| AclWI | GGATC | 2 cut(s) | 77, 350 |
| AcoI | YGGCCR | 1 cut(s) | 789 |
| AcsI | RAATTY | 1 cut(s) | 4 |
| AdeI | CACNNNGTG | 1 cut(s) | 60 |
| AfaI | GTAC | 3 cut(s) | 278, 643, 785 |
| AgsI | TTSAA | 2 cut(s) | 49, 809 |
| AluBI | AGCT | 2 cut(s) | 391, 400 |
| AluI | AGCT | 2 cut(s) | 391, 400 |
| Alw26I | GTCTC | 3 cut(s) | 625, 804, 898 |
| AlwI | GGATC | 2 cut(s) | 77, 350 |
| AoxI | GGCC | 1 cut(s) | 789 |
| ApoI | RAATTY | 1 cut(s) | 4 |
| AseI | ATTAAT | 1 cut(s) | 599 |
| AspS9I | GGNCC | 2 cut(s) | 293, 374 |
| AsuHPI | GGTGA | 2 cut(s) | 139, 266 |
| AsuII | TTCGAA | 1 cut(s) | 456 |
| AvaII | GGWCC | 2 cut(s) | 293, 374 |
| BbsI | GAAGAC | 2 cut(s) | 442, 923 |
| BccI | CCATC | 3 cut(s) | 245, 374, 627 |
| BceAI | ACGGC | 1 cut(s) | 776 |
| BclI | TGATCA | 1 cut(s) | 312 |
| BcoDI | GTCTC | 3 cut(s) | 625, 804, 898 |
| BfaI | CTAG | 3 cut(s) | 158, 489, 639 |
| BfmI | CTRYAG | 1 cut(s) | 386 |
| BfuAI | ACCTGC | 1 cut(s) | 385 |
| Bme18I | GGWCC | 2 cut(s) | 293, 374 |
| BmgT120I | GGNCC | 2 cut(s) | 293, 374 |
| BmsI | GCATC | 2 cut(s) | 129, 526 |
| BpiI | GAAGAC | 2 cut(s) | 442, 923 |
| BpmI | CTGGAG | 1 cut(s) | 582 |
| Bpu14I | TTCGAA | 1 cut(s) | 456 |
| BsaJI | CCNNGG | 1 cut(s) | 628 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 895, 925 |
| Bse118I | RCCGGY | 1 cut(s) | 128 |
| Bse3DI | GCAATG | 1 cut(s) | 755 |
| BseDI | CCNNGG | 1 cut(s) | 628 |
| BseGI | GGATG | 1 cut(s) | 638 |
| BseMI | GCAATG | 1 cut(s) | 755 |
| BseMII | CTCAG | 1 cut(s) | 417 |
| BshFI | GGCC | 1 cut(s) | 791 |
| BsiSI | CCGG | 1 cut(s) | 129 |
| BsmAI | GTCTC | 3 cut(s) | 625, 804, 898 |
| BsnI | GGCC | 1 cut(s) | 791 |
| Bsp119I | TTCGAA | 1 cut(s) | 456 |
| Bsp143I | GATC | 3 cut(s) | 82, 312, 342 |
| BspANI | GGCC | 1 cut(s) | 791 |
| BspCNI | CTCAG | 1 cut(s) | 416 |
| BspMI | ACCTGC | 1 cut(s) | 385 |
| BspPI | GGATC | 2 cut(s) | 77, 350 |
| BspQI | GCTCTTC | 1 cut(s) | 804 |
| BspT104I | TTCGAA | 1 cut(s) | 456 |
| BsrDI | GCAATG | 1 cut(s) | 755 |
| BsrFI | RCCGGY | 1 cut(s) | 128 |
| BssAI | RCCGGY | 1 cut(s) | 128 |
| BssECI | CCNNGG | 1 cut(s) | 628 |
| BssMI | GATC | 3 cut(s) | 82, 312, 342 |
| Bst4CI | ACNGT | 2 cut(s) | 95, 178 |
| Bst6I | CTCTTC | 3 cut(s) | 229, 309, 804 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 693 |
| BstBI | TTCGAA | 1 cut(s) | 456 |
| BstC8I | GCNNGC | 1 cut(s) | 130 |
| BstDEI | CTNAG | 2 cut(s) | 403, 499 |
| BstF5I | GGATG | 1 cut(s) | 638 |
| BstKTI | GATC | 3 cut(s) | 85, 315, 345 |
| BstMAI | GTCTC | 3 cut(s) | 625, 804, 898 |
| BstMBI | GATC | 3 cut(s) | 82, 312, 342 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 397, 406, 693 |
| BstSFI | CTRYAG | 1 cut(s) | 386 |
| BstV2I | GAAGAC | 2 cut(s) | 442, 923 |
| BsuRI | GGCC | 1 cut(s) | 791 |
| BtsCI | GGATG | 1 cut(s) | 638 |
| BtsIMutI | CAGTG | 1 cut(s) | 411 |
| BveI | ACCTGC | 1 cut(s) | 385 |
| Cac8I | GCNNGC | 1 cut(s) | 130 |
| Cfr10I | RCCGGY | 1 cut(s) | 128 |
| Cfr13I | GGNCC | 2 cut(s) | 293, 374 |
| CseI | GACGC | 2 cut(s) | 202, 512 |
| Csp6I | GTAC | 3 cut(s) | 277, 642, 784 |
| CviAII | CATG | 1 cut(s) | 930 |
| CviJI | RGCY | 6 cut(s) | 391, 400, 461, 595, 791, 814 |
| CviKI_1 | RGCY | 6 cut(s) | 391, 400, 461, 595, 791, 814 |
| CviQI | GTAC | 3 cut(s) | 277, 642, 784 |
| DdeI | CTNAG | 2 cut(s) | 403, 499 |
| DpnI | GATC | 3 cut(s) | 84, 314, 344 |
| DpnII | GATC | 3 cut(s) | 82, 312, 342 |
| DraIII | CACNNNGTG | 1 cut(s) | 60 |
| EaeI | YGGCCR | 1 cut(s) | 789 |
| Eam1104I | CTCTTC | 3 cut(s) | 229, 309, 804 |
| EarI | CTCTTC | 3 cut(s) | 229, 309, 804 |
| Eco47I | GGWCC | 2 cut(s) | 293, 374 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| FaeI | CATG | 1 cut(s) | 933 |
| FatI | CATG | 1 cut(s) | 929 |
| FbaI | TGATCA | 1 cut(s) | 312 |
| FokI | GGATG | 1 cut(s) | 645 |
| FspBI | CTAG | 3 cut(s) | 158, 489, 639 |
| GsuI | CTGGAG | 1 cut(s) | 582 |
| HaeIII | GGCC | 1 cut(s) | 791 |
| HapII | CCGG | 1 cut(s) | 129 |
| HgaI | GACGC | 2 cut(s) | 202, 512 |
| Hin1II | CATG | 1 cut(s) | 933 |
| HinfI | GANTC | 5 cut(s) | 23, 322, 511, 531, 564 |
| HpaII | CCGG | 1 cut(s) | 129 |
| HphI | GGTGA | 2 cut(s) | 139, 266 |
| Hpy166II | GTNNAC | 1 cut(s) | 784 |
| Hpy188I | TCNGA | 4 cut(s) | 10, 28, 903, 925 |
| Hpy188III | TCNNGA | 3 cut(s) | 225, 319, 561 |
| Hpy8I | GTNNAC | 1 cut(s) | 784 |
| Hpy99I | CGWCG | 2 cut(s) | 155, 196 |
| HpyAV | CCTTC | 4 cut(s) | 208, 267, 297, 698 |
| HpyCH4III | ACNGT | 2 cut(s) | 95, 178 |
| HpyCH4IV | ACGT | 2 cut(s) | 153, 647 |
| HpyCH4V | TGCA | 7 cut(s) | 54, 329, 570, 585, 687, 696, 745 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 397, 406, 693 |
| HpyF3I | CTNAG | 2 cut(s) | 403, 499 |
| HpySE526I | ACGT | 2 cut(s) | 153, 647 |
| Hsp92II | CATG | 1 cut(s) | 933 |
| KroI | GCCGGC | 1 cut(s) | 128 |
| KroNI | GCCGGC | 1 cut(s) | 130 |
| Ksp22I | TGATCA | 1 cut(s) | 312 |
| Kzo9I | GATC | 3 cut(s) | 82, 312, 342 |
| LguI | GCTCTTC | 1 cut(s) | 804 |
| LpnPI | CCDG | 9 cut(s) | 142, 276, 390, 459, 513, 527, 546, 571, 816 |
| LweI | GCATC | 2 cut(s) | 129, 526 |
| MaeI | CTAG | 3 cut(s) | 158, 489, 639 |
| MaeII | ACGT | 2 cut(s) | 153, 647 |
| MaeIII | GTNAC | 3 cut(s) | 172, 178, 544 |
| MalI | GATC | 3 cut(s) | 84, 314, 344 |
| MboI | GATC | 3 cut(s) | 82, 312, 342 |
| MluCI | AATT | 4 cut(s) | 4, 65, 198, 360 |
| MlyI | GAGTC | 1 cut(s) | 573 |
| MmeI | TCCRAC | 1 cut(s) | 881 |
| MnlI | CCTC | 6 cut(s) | 64, 150, 472, 602, 623, 669 |
| MroNI | GCCGGC | 1 cut(s) | 128 |
| MseI | TTAA | 3 cut(s) | 90, 599, 732 |
| MspI | CCGG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 397, 406, 693 |
| NaeI | GCCGGC | 1 cut(s) | 130 |
| NdeII | GATC | 3 cut(s) | 82, 312, 342 |
| NgoMIV | GCCGGC | 1 cut(s) | 128 |
| NlaIII | CATG | 1 cut(s) | 933 |
| NmuCI | GTSAC | 1 cut(s) | 544 |
| NspV | TTCGAA | 1 cut(s) | 456 |
| PciSI | GCTCTTC | 1 cut(s) | 804 |
| PdiI | GCCGGC | 1 cut(s) | 130 |
| PfeI | GAWTC | 4 cut(s) | 23, 322, 511, 531 |
| PleI | GAGTC | 1 cut(s) | 572 |
| PpsI | GAGTC | 1 cut(s) | 572 |
| PshBI | ATTAAT | 1 cut(s) | 599 |
| PsiI | TTATAA | 1 cut(s) | 770 |
| Psp1406I | AACGTT | 1 cut(s) | 647 |
| PspPI | GGNCC | 2 cut(s) | 293, 374 |
| RsaI | GTAC | 3 cut(s) | 278, 643, 785 |
| RsaNI | GTAC | 3 cut(s) | 277, 642, 784 |
| SapI | GCTCTTC | 1 cut(s) | 804 |
| SaqAI | TTAA | 3 cut(s) | 90, 599, 732 |
| Sau3AI | GATC | 3 cut(s) | 82, 312, 342 |
| Sau96I | GGNCC | 2 cut(s) | 293, 374 |
| SchI | GAGTC | 1 cut(s) | 573 |
| SetI | ASST | 8 cut(s) | 156, 219, 278, 337, 379, 393, 402, 650 |
| SfaNI | GCATC | 2 cut(s) | 129, 526 |
| SfcI | CTRYAG | 1 cut(s) | 386 |
| SfuI | TTCGAA | 1 cut(s) | 456 |
| SinI | GGWCC | 2 cut(s) | 293, 374 |
| Sse9I | AATT | 4 cut(s) | 4, 65, 198, 360 |
| SspMI | CTAG | 3 cut(s) | 158, 489, 639 |
| TaaI | ACNGT | 2 cut(s) | 95, 178 |
| TaiI | ACGT | 2 cut(s) | 156, 650 |
| TaqI | TCGA | 4 cut(s) | 69, 429, 456, 534 |
| TasI | AATT | 4 cut(s) | 4, 65, 198, 360 |
| TatI | WGTACW | 2 cut(s) | 641, 783 |
| TfiI | GAWTC | 4 cut(s) | 23, 322, 511, 531 |
| Tru1I | TTAA | 3 cut(s) | 90, 599, 732 |
| Tru9I | TTAA | 3 cut(s) | 90, 599, 732 |
| TscAI | CASTG | 1 cut(s) | 411 |
| TseFI | GTSAC | 1 cut(s) | 544 |
| Tsp45I | GTSAC | 1 cut(s) | 544 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 411 |
| VpaK11BI | GGWCC | 2 cut(s) | 293, 374 |
| VspI | ATTAAT | 1 cut(s) | 599 |
| XapI | RAATTY | 1 cut(s) | 4 |
| XspI | CTAG | 3 cut(s) | 158, 489, 639 |