Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004078

Physical Location & Seq

Genomic Coordinates Forward (+)

18258569 .. 18261542

Gene Structure 2974 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G44150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGCCAGCCAGCAAAAAGATTTCGGACCGGAATCACTTAGGGCAAGTGTTCGACAAGCTATTGAATCAGATTGGAGAATCTGAAGAATTCGAGTTACCGGAGTGGTTGAATAAAGGAAAACCTACTCCTTATATCTTCATCAGGCGCAATATATACTTGACGAAGAAAGTCAAAAGGAGGGTTGAAGATGATGGAATCTTCTGTTCTTGCTCCTCCTCGTCTCCTGGTTCTTCTTCAACTGTCTGTGGGAGTAATTGCCATTGTGGGATGCTATTCTCAAGCTGTTCCTCAAGTTGCAAGTGTGGGAGTGAGTGTAACAATAAGCCGTTCCAACAACGACATGTCAAGAAGATGAAGTTAATTCAGACAGAAAAATGCGGATCAGGGATTGTGGCAGAAGAAGAAATCGAAGCTGGAGAGTTTATCATTGAATATGTTGGAGAAGTTATTGATGATAAGACTTGTGAAGAGAGGCTTTGGAAGATGAAACACCGTGGCGAGACAAACTTTTATTTATGTGAGATAACCAGAGATATGGTTATTGATGCTACTCATAAGGGAAACAAATCAAGATATATTAATCATAGCTGCAACCCTAATACGCAGATGCAGAAATGGATAATTGACGGCGAGACCAGAATCGGCATTTTCGCCACCCGTGGTATCAAAAAGGGAGAGCATTTGACCTATGATTATCAGTTTGTTCAGTTTGGTGCAGATCAAGACTGCCATTGTGGGGCTGTAGGTTGCAGAAGGAAGCTTGGTGTAAAACCTAGCAAACCTAAGATAGCCTCGGATGAAGCTTTTAATCTAGTGGCACATGAATTGGCCCAGACACTGCCCAAGGTGCATCAAAATGGACTTGTAAATAGACACATAGATGCAGGAAAATCATGGAACAATCTTAGTCAAAGGGATACATGTTCGCGTAATTGCATTGGTGTGGTGATCAGGTTATCTCGCCCCACGAGTGATAGGTGTTTTGGCCTCGTTAGACATTTTGATGAGTATTCAAGAAAGCACTCGGTGATGTTCGAGGATGGTGTTACCGAGTTTGTCGACATGTCGAGAGAAGACTGGGAGATTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006464 GO:0006479 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009506 GO:0009987 GO:0012505 GO:0016278 GO:0016279 GO:0016740 GO:0016741 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0030054 GO:0032259 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 map00310

Pfam Domains

Protein Families

SET

Protein Analysis

363

Amino Acids

41.29

Weight (kDa)

8.19

Isoelectric Point (pI)

47.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SET	PF00856	127 - 233	8.4e-27	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44150 AT3G59960 AT3G59960 AT3G59960 AT3G59960
fragaria_vesca	FvH4_1g00050 FvH4_1g00050 FvH4_1g00050 FvH4_1g00050 FvH4_1g00050 FvH4_1g00050 FvH4_1g00050 FvH4_1g00050 FvH4_1g30000 FvH4_1g30000
malus_domestica	MD15G1141800.v1.1
prunus_persica	Prupe.7G271600_v2.0.a1 Prupe.7G271600_v2.0.a1 Prupe.7G271600_v2.0.a1 Prupe.7G271600_v2.0.a1 Prupe.7G271600_v2.0.a1 Prupe.7G271600_v2.0.a1 Prupe.7G271600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0084271
rosa_laevigata	RLG00000015605
rosa_multiflora	Rmu_co8457195.1_g000001 Rmu_sc0003129.1_g000015
rosa_rugosa	Rorug01G0452300
rosa_samantha	Rh2AG000700 Rh2BG000600 Rh2CG000500 Rh2DG000700
rosa_wichuraiana	Rw2G000050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1059
AccII	CGCG	1 cut(s)	928
AciI	CCGC	1 cut(s)	378
AclWI	GGATC	1 cut(s)	388
AcsI	RAATTY	1 cut(s)	86
AcuI	CTGAAG	1 cut(s)	102
AdeI	CACNNNGTG	1 cut(s)	1027
AfiI	CCNNNNNNNGG	1 cut(s)	736
AflIII	ACRYGT	3 cut(s)	340, 920, 1062
AgsI	TTSAA	6 cut(s)	64, 109, 185, 237, 431, 1014
AjnI	CCWGG	1 cut(s)	223
AluBI	AGCT	6 cut(s)	58, 282, 413, 588, 760, 803
AluI	AGCT	6 cut(s)	58, 282, 413, 588, 760, 803
Alw26I	GTCTC	3 cut(s)	225, 494, 626
AlwI	GGATC	1 cut(s)	388
AlwNI	CAGNNNCTG	1 cut(s)	838
AoxI	GGCC	2 cut(s)	828, 985
ApeKI	GCWGC	1 cut(s)	588
ApoI	RAATTY	1 cut(s)	86
AseI	ATTAAT	1 cut(s)	579
AspLEI	GCGC	1 cut(s)	147
AspS9I	GGNCC	2 cut(s)	25, 829
AsuHPI	GGTGA	2 cut(s)	958, 1039
AvaII	GGWCC	1 cut(s)	25
BauI	CACGAG	1 cut(s)	967
BbsI	GAAGAC	1 cut(s)	1080
BbvI	GCAGC	1 cut(s)	575
BccI	CCATC	2 cut(s)	185, 1034
BceAI	ACGGC	2 cut(s)	310, 643
BciT130I	CCWGG	1 cut(s)	225
BciVI	GTATCC	1 cut(s)	910
BclI	TGATCA	1 cut(s)	948
BcoDI	GTCTC	3 cut(s)	225, 494, 626
BfaI	CTAG	2 cut(s)	774, 812
BfmI	CTRYAG	1 cut(s)	741
BfuI	GTATCC	1 cut(s)	910
BisI	GCNGC	1 cut(s)	589
BlsI	GCNGC	1 cut(s)	590
Bme1390I	CCNGG	1 cut(s)	225
Bme18I	GGWCC	1 cut(s)	25
BmgT120I	GGNCC	2 cut(s)	25, 829
BmrFI	CCNGG	1 cut(s)	225
BmrI	ACTGGG	1 cut(s)	1087
BmsI	GCATC	5 cut(s)	258, 535, 597, 859, 871
BmuI	ACTGGG	1 cut(s)	1087
BpiI	GAAGAC	1 cut(s)	1080
BpmI	CTGGAG	1 cut(s)	435
BpuEI	CTTGAG	2 cut(s)	262, 274
BsaI	GGTCTC	1 cut(s)	626
BsaJI	CCNNGG	4 cut(s)	493, 658, 792, 843
BsaWI	WCCGGW	2 cut(s)	27, 97
BsaXI	ACNNNNNCTCC	2 cut(s)	298, 328
Bsc4I	CCNNNNNNNGG	1 cut(s)	736
Bse1I	ACTGG	1 cut(s)	1082
BseBI	CCWGG	1 cut(s)	225
BseDI	CCNNGG	4 cut(s)	493, 658, 792, 843
BseGI	GGATG	3 cut(s)	273, 802, 1045
BseLI	CCNNNNNNNGG	1 cut(s)	736
BseNI	ACTGG	1 cut(s)	1082
BseRI	GAGGAG	2 cut(s)	202, 205
BseXI	GCAGC	1 cut(s)	575
BsgI	GTGCAG	1 cut(s)	735
Bsh1236I	CGCG	1 cut(s)	928
BshFI	GGCC	2 cut(s)	830, 987
BsiSI	CCGG	2 cut(s)	28, 98
BslI	CCNNNNNNNGG	1 cut(s)	736
BsmAI	GTCTC	3 cut(s)	225, 494, 626
BsmBI	CGTCTC	1 cut(s)	225
BsnI	GGCC	2 cut(s)	830, 987
Bso31I	GGTCTC	1 cut(s)	626
Bsp143I	GATC	3 cut(s)	380, 718, 948
BspACI	CCGC	1 cut(s)	378
BspANI	GGCC	2 cut(s)	830, 987
BspFNI	CGCG	1 cut(s)	928
BspPI	GGATC	1 cut(s)	388
BspTNI	GGTCTC	1 cut(s)	626
BsrI	ACTGG	1 cut(s)	1082
BssECI	CCNNGG	4 cut(s)	493, 658, 792, 843
BssMI	GATC	3 cut(s)	380, 718, 948
BssSI	CACGAG	1 cut(s)	967
BssT1I	CCWWGG	1 cut(s)	843
Bst2BI	CACGAG	1 cut(s)	967
Bst2UI	CCWGG	1 cut(s)	225
Bst4CI	ACNGT	2 cut(s)	241, 494
Bst6I	CTCTTC	1 cut(s)	462
BstC8I	GCNNGC	2 cut(s)	6, 10
BstDEI	CTNAG	3 cut(s)	37, 783, 905
BstDSI	CCRYGG	2 cut(s)	493, 658
BstF5I	GGATG	3 cut(s)	273, 802, 1045
BstFNI	CGCG	1 cut(s)	928
BstHHI	GCGC	1 cut(s)	147
BstKTI	GATC	3 cut(s)	383, 721, 951
BstMAI	GTCTC	3 cut(s)	225, 494, 626
BstMBI	GATC	3 cut(s)	380, 718, 948
BstMWI	GCNNNNNNNGC	1 cut(s)	847
BstNI	CCWGG	1 cut(s)	225
BstNSI	RCATGY	3 cut(s)	344, 924, 1066
BstSCI	CCNGG	1 cut(s)	223
BstSFI	CTRYAG	1 cut(s)	741
BstUI	CGCG	1 cut(s)	928
BstV1I	GCAGC	1 cut(s)	575
BstV2I	GAAGAC	1 cut(s)	1080
BstXI	CCANNNNNNTGG	1 cut(s)	535
BsuI	GTATCC	1 cut(s)	910
BsuRI	GGCC	2 cut(s)	830, 987
BtgI	CCRYGG	2 cut(s)	493, 658
BtsCI	GGATG	3 cut(s)	273, 802, 1045
BtsI	GCAGTG	1 cut(s)	836
BtsIMutI	CAGTG	1 cut(s)	836
Cac8I	GCNNGC	2 cut(s)	6, 10
CaiI	CAGNNNCTG	1 cut(s)	838
CfoI	GCGC	1 cut(s)	147
Cfr13I	GGNCC	2 cut(s)	25, 829
CpoI	CGGWCCG	1 cut(s)	25
CspI	CGGWCCG	1 cut(s)	25
CviAII	CATG	5 cut(s)	341, 821, 894, 921, 1063
DdeI	CTNAG	3 cut(s)	37, 783, 905
DpnI	GATC	3 cut(s)	382, 720, 950
DpnII	GATC	3 cut(s)	380, 718, 948
DraIII	CACNNNGTG	1 cut(s)	1027
Eam1104I	CTCTTC	1 cut(s)	462
EarI	CTCTTC	1 cut(s)	462
Eco130I	CCWWGG	1 cut(s)	843
Eco31I	GGTCTC	1 cut(s)	626
Eco47I	GGWCC	1 cut(s)	25
Eco57I	CTGAAG	1 cut(s)	102
EcoRI	GAATTC	1 cut(s)	86
EcoRII	CCWGG	1 cut(s)	223
EcoT14I	CCWWGG	1 cut(s)	843
ErhI	CCWWGG	1 cut(s)	843
Esp3I	CGTCTC	1 cut(s)	225
FaeI	CATG	5 cut(s)	344, 824, 897, 924, 1066
FalI	AAGNNNNNCTT	2 cut(s)	459, 491
FatI	CATG	5 cut(s)	340, 820, 893, 920, 1062
FbaI	TGATCA	1 cut(s)	948
FblI	GTMKAC	1 cut(s)	1059
Fnu4HI	GCNGC	1 cut(s)	589
FokI	GGATG	3 cut(s)	280, 809, 1052
Fsp4HI	GCNGC	1 cut(s)	589
FspBI	CTAG	2 cut(s)	774, 812
GlaI	GCGC	1 cut(s)	146
GluI	GCNGC	1 cut(s)	589
GsuI	CTGGAG	1 cut(s)	435
HaeIII	GGCC	2 cut(s)	830, 987
HapII	CCGG	2 cut(s)	28, 98
HhaI	GCGC	1 cut(s)	147
Hin1II	CATG	5 cut(s)	344, 824, 897, 924, 1066
Hin6I	GCGC	1 cut(s)	145
HinP1I	GCGC	1 cut(s)	145
HincII	GTYRAC	1 cut(s)	1060
HindII	GTYRAC	1 cut(s)	1060
HindIII	AAGCTT	2 cut(s)	758, 801
HinfI	GANTC	5 cut(s)	31, 64, 77, 195, 639
HpaII	CCGG	2 cut(s)	28, 98
HphI	GGTGA	2 cut(s)	958, 1039
Hpy166II	GTNNAC	1 cut(s)	1060
Hpy188I	TCNGA	5 cut(s)	25, 69, 82, 366, 796
Hpy188III	TCNNGA	5 cut(s)	346, 570, 722, 1014, 1068
Hpy8I	GTNNAC	1 cut(s)	1060
HpyAV	CCTTC	1 cut(s)	747
HpyCH4III	ACNGT	2 cut(s)	241, 494
HpyCH4V	TGCA	8 cut(s)	297, 591, 610, 716, 750, 850, 884, 936
HpyF10VI	GCNNNNNNNGC	1 cut(s)	847
HpyF3I	CTNAG	3 cut(s)	37, 783, 905
Hsp92II	CATG	5 cut(s)	344, 824, 897, 924, 1066
HspAI	GCGC	1 cut(s)	145
Ksp22I	TGATCA	1 cut(s)	948
Kzo9I	GATC	3 cut(s)	380, 718, 948
LmnI	GCTCC	1 cut(s)	215
Lsp1109I	GCAGC	1 cut(s)	575
LweI	GCATC	5 cut(s)	258, 535, 597, 859, 871
MaeI	CTAG	2 cut(s)	774, 812
MaeIII	GTNAC	3 cut(s)	93, 314, 1045
MalI	GATC	3 cut(s)	382, 720, 950
MboI	GATC	3 cut(s)	380, 718, 948
MluCI	AATT	6 cut(s)	86, 253, 360, 621, 824, 931
MmeI	TCCRAC	2 cut(s)	355, 418
MnlI	CCTC	8 cut(s)	171, 223, 226, 298, 465, 802, 998, 1030
MseI	TTAA	3 cut(s)	359, 579, 807
MslI	CAYNNNNRTG	4 cut(s)	855, 879, 941, 1002
MspI	CCGG	2 cut(s)	28, 98
MspR9I	CCNGG	1 cut(s)	225
MvaI	CCWGG	1 cut(s)	225
MvnI	CGCG	1 cut(s)	928
MwoI	GCNNNNNNNGC	1 cut(s)	847
NdeII	GATC	3 cut(s)	380, 718, 948
NlaIII	CATG	5 cut(s)	344, 824, 897, 924, 1066
NspI	RCATGY	3 cut(s)	344, 924, 1066
PciI	ACATGT	3 cut(s)	340, 920, 1062
PfeI	GAWTC	5 cut(s)	31, 64, 77, 195, 639
PkrI	GCNGC	1 cut(s)	590
PscI	ACATGT	3 cut(s)	340, 920, 1062
PshBI	ATTAAT	1 cut(s)	579
Psp6I	CCWGG	1 cut(s)	223
PspGI	CCWGG	1 cut(s)	223
PspPI	GGNCC	2 cut(s)	25, 829
PstNI	CAGNNNCTG	1 cut(s)	838
RseI	CAYNNNNRTG	4 cut(s)	855, 879, 941, 1002
Rsr2I	CGGWCCG	1 cut(s)	25
RsrII	CGGWCCG	1 cut(s)	25
SalI	GTCGAC	1 cut(s)	1058
SaqAI	TTAA	3 cut(s)	359, 579, 807
SatI	GCNGC	1 cut(s)	589
Sau3AI	GATC	3 cut(s)	380, 718, 948
Sau96I	GGNCC	2 cut(s)	25, 829
ScrFI	CCNGG	1 cut(s)	225
SfaNI	GCATC	5 cut(s)	258, 535, 597, 859, 871
SfcI	CTRYAG	1 cut(s)	741
SinI	GGWCC	1 cut(s)	25
SmiMI	CAYNNNNRTG	4 cut(s)	855, 879, 941, 1002
SmlI	CTYRAG	2 cut(s)	277, 289
SmoI	CTYRAG	2 cut(s)	277, 289
Sse9I	AATT	6 cut(s)	86, 253, 360, 621, 824, 931
SsiI	CCGC	1 cut(s)	378
SspMI	CTAG	2 cut(s)	774, 812
StyD4I	CCNGG	1 cut(s)	223
StyI	CCWWGG	1 cut(s)	843
TaaI	ACNGT	2 cut(s)	241, 494
TaqI	TCGA	6 cut(s)	51, 90, 408, 1035, 1059, 1067
TasI	AATT	6 cut(s)	86, 253, 360, 621, 824, 931
TfiI	GAWTC	5 cut(s)	31, 64, 77, 195, 639
Tru1I	TTAA	3 cut(s)	359, 579, 807
Tru9I	TTAA	3 cut(s)	359, 579, 807
TscAI	CASTG	1 cut(s)	843
TseI	GCWGC	1 cut(s)	588
TspDTI	ATGAA	5 cut(s)	127, 368, 500, 813, 837
TspRI	CASTG	1 cut(s)	843
VpaK11BI	GGWCC	1 cut(s)	25
VspI	ATTAAT	1 cut(s)	579
XapI	RAATTY	1 cut(s)	86
XceI	RCATGY	3 cut(s)	344, 924, 1066
XmiI	GTMKAC	1 cut(s)	1059
XspI	CTAG	2 cut(s)	774, 812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.