Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005390

Physical Location & Seq

Genomic Coordinates Reverse (-)

18301223 .. 18304627

Gene Structure 3405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G44280.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGACGTCATCGGTTATTGTCGGAATGGAAGAAGAAGAAGAAGATCCATCGACAAAACCACTTGGAAGATTGTCTGTGTTCTATTATGGAGTTGGACATATGCTTAATGACATTACTGCTTCTTGTTGGTTCACTTACCTTCTCTTGTTTTTAACCCAAATTGGCCTCTCCCCAAGGGATGCTGCAATTGTCATGCTCTCTGGTCAAGTTGCTGATGGTTTTGCTACAATCTTCATCGGTGAATTGATTGATAGATTTGGGCATTTCAAAATTTGGCATGCTGCAGGATCCTTATTAGTTGCTATCTCATTTTCCTCTGTTTTTGGCGGTTGTTTGCCTTGTTCACTCCTCCATAATAACTCTTCAACTATCGAAACATTATCGTACAGTATGTTTGCAGCTATCTTCAATATTGGATGGGCTGCTACTCAGGTTTCTCACATGGCTATGGTTAATTGCATTACATTGAATTCAACAAGCAGAGTAGCACTAACAAGCTCCCGTAATGCGTTTAGCATGGTTGCTAATTTAGGCTTATACGCTATTGCTTTAGTTGTATTTGGTGTTAGCGAGGCCGTGACAAAAGAAAATACCGAATCTCAGTATCGTTGGATTGCTTATTCATCCATCACCGTTGGCTGCTGCTTTGTGGTCATATTTCTTATGGGGACAAAGGAACCAAGGCTGAGGATAAATCTAAGAGAAACTAGTCGAGCAAGAATACCATGGTCTTATTGGTTCCGTAAAATTCTATACTATCAAGTTGCTATGGTTTATCTCCTCACTCGACTAGTATTGAATGTTTCACAGGCATATCTTGCATTCTTTGTTATTGATGATTTGCAAATGGCTCAATCTGCTAAAGCTCTGATTCCTGCAATAATCTACGTATGCAGCTTCGTTGTATCAGTTATGCTTCAGGAGATTCCTTGGAATGGAAAACGCCTCAAGGCATATTATTGTGCTGGTGGTATTATTTGGATATTCTGCGGTATATCAATACTCTTATTGCCCAGAAGCATTAACTCTTACATGTATGCGATCTCTGTCTTTATCGGCATCGCAAATGCAGTAATGTTGGTGACATCAATTAGTATGCAGAGTGTCTTGATTGGTTCGAAACTCGGGGGATGTGCTTTCGTTTGTGGGTCATTAAGCTTCTTAGACAAAATGTCATGTGGGCTTGCTTTATATGTTCTTCAGTCACATCAAGGCACTTCACCAAAGGTTGACGTAAACATCAAAGAATATTTTTACTTCTCGGTGACAAGATATGGGTTAGGACTTGTTCCAGCTGTATGCTCGCTTGTTGGAGTTGTTGTAACATATTTTATGGAACTCGATAGCACGATTCTAAAGCCTCTGTGTCAACCGCTACTACTAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_2

Protein Analysis

462

Amino Acids

50.95

Weight (kDa)

8.13

Isoelectric Point (pI)

39.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_2	PF13347	29 - 448	2.4e-15	MFS/sugar transport protein
MFS_1	PF07690	32 - 372	3.2e-07	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005390)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44280 AT2G44280 AT2G44280 AT2G44280 AT3G60070 AT3G60070 AT3G60070 AT3G60070 AT3G60070 AT3G60070
fragaria_vesca	FvH4_c5g00010
malus_domestica	MD02G1320400.v1.1
prunus_persica	Prupe.2G001700_v2.0.a1 Prupe.2G001700_v2.0.a1 Prupe.2G001700_v2.0.a1 Prupe.2G001700_v2.0.a1 Prupe.2G001700_v2.0.a1
pyrus_communis	pycom02g26830
rosa_chinensis	RchiOBHm_Chr1g0313141
rosa_laevigata	RLG00000030819
rosa_multiflora	Rmu_sc0001606.1_g000018
rosa_roxburghii	Rroxscaffold_4G00332430
rosa_rugosa	RorugPtG0000900.1 RorugPtG0001000
rosa_samantha	Rh1AG001100 Rh1CG003300 Rh1CG005800 Rh1DG001100
rosa_wichuraiana	Rw1G000020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	8
AciI	CCGC	3 cut(s)	327, 990, 1373
AclWI	GGATC	3 cut(s)	38, 282, 295
AcsI	RAATTY	3 cut(s)	270, 469, 747
AcuI	CTGAAG	2 cut(s)	902, 1184
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	1 cut(s)	386
AfiI	CCNNNNNNNGG	1 cut(s)	935
AflIII	ACRYGT	1 cut(s)	1032
AgsI	TTSAA	6 cut(s)	268, 366, 409, 469, 474, 799
AhdI	GACNNNNNGTC	1 cut(s)	1171
AhlI	ACTAGT	2 cut(s)	707, 790
AluBI	AGCT	6 cut(s)	401, 498, 866, 897, 1158, 1295
AluI	AGCT	6 cut(s)	401, 498, 866, 897, 1158, 1295
AlwI	GGATC	3 cut(s)	38, 282, 295
Ama87I	CYCGRG	1 cut(s)	1124
AoxI	GGCC	2 cut(s)	163, 573
ApeKI	GCWGC	7 cut(s)	182, 281, 398, 422, 639, 642, 894
ApoI	RAATTY	3 cut(s)	270, 469, 747
AsuHPI	GGTGA	5 cut(s)	251, 622, 1093, 1212, 1276
AsuII	TTCGAA	1 cut(s)	1118
AvaI	CYCGRG	1 cut(s)	1124
BamHI	GGATCC	1 cut(s)	287
BbvCI	CCTCAGC	1 cut(s)	686
BbvI	GCAGC	7 cut(s)	169, 268, 409, 410, 626, 629, 906
BccI	CCATC	4 cut(s)	55, 209, 411, 635
BceAI	ACGGC	1 cut(s)	560
BcuI	ACTAGT	2 cut(s)	707, 790
BfaI	CTAG	3 cut(s)	708, 791, 1382
BfmI	CTRYAG	1 cut(s)	282
BisI	GCNGC	7 cut(s)	183, 282, 399, 423, 640, 643, 895
BlsI	GCNGC	7 cut(s)	184, 283, 400, 424, 641, 644, 896
BmeRI	GACNNNNNGTC	1 cut(s)	1171
BmeT110I	CYCGRG	1 cut(s)	1124
BmiI	GGNNCC	3 cut(s)	289, 678, 740
BmsI	GCATC	2 cut(s)	169, 1068
Bpu10I	CCTNAGC	1 cut(s)	686
Bpu14I	TTCGAA	1 cut(s)	1118
BpuEI	CTTGAG	1 cut(s)	932
BsaAI	YACGTR	1 cut(s)	889
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	4 cut(s)	173, 680, 725, 929
BsaXI	ACNNNNNCTCC	2 cut(s)	1305, 1335
Bsc4I	CCNNNNNNNGG	1 cut(s)	935
BseDI	CCNNGG	4 cut(s)	173, 680, 725, 929
BseGI	GGATG	4 cut(s)	184, 422, 623, 1136
BseLI	CCNNNNNNNGG	1 cut(s)	935
BseMII	CTCAG	3 cut(s)	443, 614, 677
BseRI	GAGGAG	2 cut(s)	338, 770
BseXI	GCAGC	7 cut(s)	169, 268, 409, 410, 626, 629, 906
BshFI	GGCC	2 cut(s)	165, 575
BsiHKCI	CYCGRG	1 cut(s)	1124
BslFI	GGGAC	1 cut(s)	682
BslI	CCNNNNNNNGG	1 cut(s)	935
BsmFI	GGGAC	1 cut(s)	682
BsmI	GAATGC	1 cut(s)	821
BsnI	GGCC	2 cut(s)	165, 575
BsoBI	CYCGRG	1 cut(s)	1124
Bsp119I	TTCGAA	1 cut(s)	1118
Bsp143I	GATC	3 cut(s)	43, 287, 1041
Bsp19I	CCATGG	1 cut(s)	725
BspACI	CCGC	3 cut(s)	327, 990, 1373
BspANI	GGCC	2 cut(s)	165, 575
BspCNI	CTCAG	3 cut(s)	442, 613, 678
BspLI	GGNNCC	3 cut(s)	289, 678, 740
BspMAI	CTGCAG	1 cut(s)	286
BspPI	GGATC	3 cut(s)	38, 282, 295
BspT104I	TTCGAA	1 cut(s)	1118
BssECI	CCNNGG	4 cut(s)	173, 680, 725, 929
BssMI	GATC	3 cut(s)	43, 287, 1041
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	4 cut(s)	173, 680, 725, 929
Bst4CI	ACNGT	2 cut(s)	389, 634
Bst6I	CTCTTC	1 cut(s)	367
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	818
BstBAI	YACGTR	1 cut(s)	889
BstBI	TTCGAA	1 cut(s)	1118
BstC8I	GCNNGC	3 cut(s)	279, 1185, 1304
BstDEI	CTNAG	5 cut(s)	429, 600, 686, 698, 1162
BstDSI	CCRYGG	1 cut(s)	725
BstF5I	GGATG	4 cut(s)	184, 422, 623, 1136
BstKTI	GATC	3 cut(s)	46, 290, 1044
BstMBI	GATC	3 cut(s)	43, 287, 1041
BstMWI	GCNNNNNNNGC	2 cut(s)	818, 857
BstNSI	RCATGY	2 cut(s)	281, 1036
BstSFI	CTRYAG	1 cut(s)	282
BstSNI	TACGTA	1 cut(s)	889
BstV1I	GCAGC	7 cut(s)	169, 268, 409, 410, 626, 629, 906
BstX2I	RGATCY	2 cut(s)	43, 287
BstYI	RGATCY	2 cut(s)	43, 287
BsuRI	GGCC	2 cut(s)	165, 575
BtgI	CCRYGG	1 cut(s)	725
BtgZI	GCGATG	1 cut(s)	1045
BtsCI	GGATG	4 cut(s)	184, 422, 623, 1136
Cac8I	GCNNGC	3 cut(s)	279, 1185, 1304
Csp6I	GTAC	1 cut(s)	385
CviAII	CATG	7 cut(s)	193, 278, 442, 517, 726, 1033, 1176
CviQI	GTAC	1 cut(s)	385
DdeI	CTNAG	5 cut(s)	429, 600, 686, 698, 1162
DpnI	GATC	3 cut(s)	45, 289, 1043
DpnII	GATC	3 cut(s)	43, 287, 1041
DriI	GACNNNNNGTC	1 cut(s)	1171
Eam1104I	CTCTTC	1 cut(s)	367
Eam1105I	GACNNNNNGTC	1 cut(s)	1171
EarI	CTCTTC	1 cut(s)	367
Eco105I	TACGTA	1 cut(s)	889
Eco130I	CCWWGG	4 cut(s)	173, 680, 725, 929
Eco57I	CTGAAG	2 cut(s)	902, 1184
Eco88I	CYCGRG	1 cut(s)	1124
EcoRI	GAATTC	1 cut(s)	469
EcoT14I	CCWWGG	4 cut(s)	173, 680, 725, 929
ErhI	CCWWGG	4 cut(s)	173, 680, 725, 929
FaeI	CATG	7 cut(s)	196, 281, 445, 520, 729, 1036, 1179
FaqI	GGGAC	1 cut(s)	682
FatI	CATG	7 cut(s)	192, 277, 441, 516, 725, 1032, 1175
FauNDI	CATATG	1 cut(s)	99
Fnu4HI	GCNGC	7 cut(s)	183, 282, 399, 423, 640, 643, 895
FokI	GGATG	4 cut(s)	191, 429, 610, 1143
Fsp4HI	GCNGC	7 cut(s)	183, 282, 399, 423, 640, 643, 895
FspBI	CTAG	3 cut(s)	708, 791, 1382
GluI	GCNGC	7 cut(s)	183, 282, 399, 423, 640, 643, 895
HaeIII	GGCC	2 cut(s)	165, 575
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	7 cut(s)	196, 281, 445, 520, 729, 1036, 1179
HincII	GTYRAC	2 cut(s)	1231, 1370
HindII	GTYRAC	2 cut(s)	1231, 1370
HindIII	AAGCTT	1 cut(s)	1156
HinfI	GANTC	4 cut(s)	596, 871, 925, 1351
HphI	GGTGA	5 cut(s)	251, 622, 1093, 1212, 1276
Hpy166II	GTNNAC	5 cut(s)	132, 344, 1231, 1237, 1370
Hpy188I	TCNGA	2 cut(s)	23, 870
Hpy188III	TCNNGA	2 cut(s)	920, 1108
Hpy8I	GTNNAC	5 cut(s)	132, 344, 1231, 1237, 1370
HpyAV	CCTTC	1 cut(s)	149
HpyCH4III	ACNGT	2 cut(s)	389, 634
HpyCH4IV	ACGT	3 cut(s)	5, 888, 1233
HpyF10VI	GCNNNNNNNGC	2 cut(s)	818, 857
HpyF3I	CTNAG	5 cut(s)	429, 600, 686, 698, 1162
HpySE526I	ACGT	3 cut(s)	5, 888, 1233
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	7 cut(s)	196, 281, 445, 520, 729, 1036, 1179
Kzo9I	GATC	3 cut(s)	43, 287, 1041
LmnI	GCTCC	1 cut(s)	503
LpnPI	CCDG	9 cut(s)	186, 270, 416, 794, 888, 905, 951, 1027, 1305
Lsp1109I	GCAGC	7 cut(s)	169, 268, 409, 410, 626, 629, 906
LweI	GCATC	2 cut(s)	169, 1068
MaeI	CTAG	3 cut(s)	708, 791, 1382
MaeII	ACGT	3 cut(s)	5, 888, 1233
MaeIII	GTNAC	5 cut(s)	577, 1081, 1203, 1264, 1321
MalI	GATC	3 cut(s)	45, 289, 1043
MboI	GATC	3 cut(s)	43, 287, 1041
MfeI	CAATTG	1 cut(s)	186
MflI	RGATCY	2 cut(s)	43, 287
MluCI	AATT	9 cut(s)	159, 186, 242, 270, 454, 469, 526, 747, 1089
MmeI	TCCRAC	3 cut(s)	73, 590, 1291
MnlI	CCTC	8 cut(s)	176, 325, 359, 565, 681, 791, 956, 1371
MseI	TTAA	5 cut(s)	105, 152, 453, 1023, 1154
MslI	CAYNNNNRTG	1 cut(s)	446
MspA1I	CMGCKG	1 cut(s)	1295
MunI	CAATTG	1 cut(s)	186
Mva1269I	GAATGC	1 cut(s)	821
MwoI	GCNNNNNNNGC	2 cut(s)	818, 857
NcoI	CCATGG	1 cut(s)	725
NdeI	CATATG	1 cut(s)	99
NdeII	GATC	3 cut(s)	43, 287, 1041
NlaIII	CATG	7 cut(s)	196, 281, 445, 520, 729, 1036, 1179
NlaIV	GGNNCC	3 cut(s)	289, 678, 740
NmuCI	GTSAC	4 cut(s)	577, 1081, 1203, 1264
NspI	RCATGY	2 cut(s)	281, 1036
NspV	TTCGAA	1 cut(s)	1118
PaeI	GCATGC	1 cut(s)	281
PciI	ACATGT	1 cut(s)	1032
PctI	GAATGC	1 cut(s)	821
PfeI	GAWTC	4 cut(s)	596, 871, 925, 1351
PkrI	GCNGC	7 cut(s)	184, 283, 400, 424, 641, 644, 896
Ppu21I	YACGTR	1 cut(s)	889
PscI	ACATGT	1 cut(s)	1032
PspN4I	GGNNCC	3 cut(s)	289, 678, 740
PstI	CTGCAG	1 cut(s)	286
PsuI	RGATCY	2 cut(s)	43, 287
PvuII	CAGCTG	1 cut(s)	1295
RsaI	GTAC	1 cut(s)	386
RsaNI	GTAC	1 cut(s)	385
RseI	CAYNNNNRTG	1 cut(s)	446
SaqAI	TTAA	5 cut(s)	105, 152, 453, 1023, 1154
SatI	GCNGC	7 cut(s)	183, 282, 399, 423, 640, 643, 895
Sau3AI	GATC	3 cut(s)	43, 287, 1041
SfaNI	GCATC	2 cut(s)	169, 1068
SfcI	CTRYAG	1 cut(s)	282
SfuI	TTCGAA	1 cut(s)	1118
SmiMI	CAYNNNNRTG	1 cut(s)	446
SmlI	CTYRAG	1 cut(s)	947
SmoI	CTYRAG	1 cut(s)	947
SnaBI	TACGTA	1 cut(s)	889
SpeI	ACTAGT	2 cut(s)	707, 790
SphI	GCATGC	1 cut(s)	281
Sse9I	AATT	9 cut(s)	159, 186, 242, 270, 454, 469, 526, 747, 1089
SsiI	CCGC	3 cut(s)	327, 990, 1373
SspI	AATATT	2 cut(s)	412, 1250
SspMI	CTAG	3 cut(s)	708, 791, 1382
StyI	CCWWGG	4 cut(s)	173, 680, 725, 929
TaaI	ACNGT	2 cut(s)	389, 634
TaiI	ACGT	3 cut(s)	8, 891, 1236
TaqI	TCGA	6 cut(s)	50, 372, 712, 787, 1118, 1341
TasI	AATT	9 cut(s)	159, 186, 242, 270, 454, 469, 526, 747, 1089
TfiI	GAWTC	4 cut(s)	596, 871, 925, 1351
Tru1I	TTAA	5 cut(s)	105, 152, 453, 1023, 1154
Tru9I	TTAA	5 cut(s)	105, 152, 453, 1023, 1154
TseFI	GTSAC	4 cut(s)	577, 1081, 1203, 1264
TseI	GCWGC	7 cut(s)	182, 281, 398, 422, 639, 642, 894
Tsp45I	GTSAC	4 cut(s)	577, 1081, 1203, 1264
TspDTI	ATGAA	2 cut(s)	223, 612
TspGWI	ACGGA	1 cut(s)	731
XapI	RAATTY	3 cut(s)	270, 469, 747
XceI	RCATGY	2 cut(s)	281, 1036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	732
XspI	CTAG	3 cut(s)	708, 791, 1382
ZraI	GACGTC	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.