Prupe.2G001700_v2.0.a1
ERF Family

Major facilitator superfamily domain-containing protein 12-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
254326 .. 261608
7283 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G001700.5

Sequence Viewer

Length: 1419 bp
ATGGCTGATTCCACTGAAGAGGATGATTCATTCACCAAGCCTCTTGGAAGATGTACTGTCACTTATTATGGCGTGGGGCATATGCTCAATGACATTACTGCTTCCTGTTGGTTTACATATCTCTTATTGTATCTGACAGATATTGGACTGTCCCCAAGGGATGCTGCTACGGTTATGCTTTCTGGTCAAATAGCTGATGGATTTGCAACCATATTTGCTGGCGAACTGATAGACAGGTTTGGACATTTCAAATTGTGGCATGGTGCAGGCTCTGTTTTGGTTGCTATTTCTTTTTCTTCCGTTTTTGGTGGTTGCATGCCCTGTAAAATTTTTGGTACCTCTTCATCAACATTGCGAACTGTTGGTTACAGTATGTTTGCTGCTATATTTAATGTGGGCTGGGCAGCTACTCAGGTTTCACACATGTCTATGTTGAATTGCATTACACTGAATTCAACAAGCAGAGTGGTCCTAGCTAGCTGTCGAAATGCTTTTAATATGGTTGCCAACCTCAGCCTGTATGCAGTTGCTTTTATAGTCTTTGGTGTCACTATAGCAAGCACACATGCCGACATTGAAAATCAGTACCGGTGGATTGCATATTTGTCAATCTTCATAGGATGCTGCTTTGTGGGTATATTTCATCTCGGAACCAAAGAGCCAAGATTAAAAGTAAGCTTACAAGGAAATAATCGTTCAAGGATTTCATGGACATACTGGTTCAAGAGAGTTCTGTATTATCAGGTTGCTCTTGTTTATGTGCTTACCAGACTAGTGGTCAATGTTTCACAGGTCTTGGTCTCAACCTTTGCAGTTCTTATATCTAGATGGCTTTCTCTTGTTCAGGCATATCTTGCATTCTATGTTATAGATGATCTGCGCATGGCACAATCAGCTAAAGCTCTGGTTCCTGCAATTATCTACATTAGCAGCTTCCTCGTATCTATAATACTACAGGAGATCTCGTGGACTGGCCAATGCTTGAAGGCCTGCTATTCTGCTGGAGCCATTGTTTGGATATTTTGTGGGGCAGGGATCCTGTTTTTACCTGGAAGCATGAGTGCTTTAATGTACATTATATCTGTATCTATTGGCATAGCAAACGCGCTAATGATGGTGACTGGAGTAAGTATGCAAAGTGTTCTAATCGACAGAGATCTCAATGGCTGCGCATTTGTATGTGGATCATTAAGCTTCATGGACAAAATCTCGTGTGGGCTTGCCTTATTTGTGCTTCAGTCATATCAAAGTACACGAGTCATACAGGAAAACCATTCAAATGATGTCTACTTCTCAGTCACAAGATTTGGTTTGGGTTTTGTTCCGGCATTTTGTTCACTCATTTCTGTGATAGTTACTTACACCATGAAACTCCAACCTGCTCCCTGTAAACCTTTAATGGAGCCTCTATTGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

473

Amino Acids

51.82

Weight (kDa)

8.41

Isoelectric Point (pI)

35.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 881, 1171
Acc36I ACCTGC 1 cut(s) 1387
Acc65I GGTACC 1 cut(s) 335
AccB1I GGYRCC 1 cut(s) 335
AccB7I CCANNNNNTGG 1 cut(s) 1014
AccI GTMKAC 1 cut(s) 1287
AccII CGCG 1 cut(s) 1106
AclWI GGATC 3 cut(s) 1030, 1043, 1192
AcoI YGGCCR 1 cut(s) 973
AcsI RAATTY 2 cut(s) 327, 451
AcuI CTGAAG 2 cut(s) 36, 1220
AfaI GTAC 5 cut(s) 55, 337, 587, 1073, 1252
AfiI CCNNNNNNNGG 1 cut(s) 1014
AflIII ACRYGT 1 cut(s) 423
AgeI ACCGGT 1 cut(s) 588
AgsI TTSAA 8 cut(s) 250, 436, 456, 578, 699, 724, 985, 1278
AhdI GACNNNNNGTC 1 cut(s) 776
AhlI ACTAGT 1 cut(s) 772
AjnI CCWGG 1 cut(s) 1048
AluBI AGCT 9 cut(s) 194, 407, 476, 480, 678, 896, 902, 933, 1194
AluI AGCT 9 cut(s) 194, 407, 476, 480, 678, 896, 902, 933, 1194
Alw26I GTCTC 1 cut(s) 805
AlwI GGATC 3 cut(s) 1030, 1043, 1192
AlwNI CAGNNNCTG 1 cut(s) 272
AoxI GGCC 2 cut(s) 973, 987
ApeKI GCWGC 6 cut(s) 164, 380, 404, 624, 930, 1167
ApoI RAATTY 2 cut(s) 327, 451
AsiGI ACCGGT 1 cut(s) 588
Asp718I GGTACC 1 cut(s) 335
AspLEI GCGC 3 cut(s) 882, 1108, 1172
AspS9I GGNCC 1 cut(s) 469
AsuHPI GGTGA 2 cut(s) 25, 1129
AsuNHI GCTAGC 1 cut(s) 476
AvaII GGWCC 1 cut(s) 469
BalI TGGCCA 1 cut(s) 975
BamHI GGATCC 1 cut(s) 1035
BanI GGYRCC 1 cut(s) 335
BauI CACGAG 3 cut(s) 964, 1210, 1254
BbvCI CCTCAGC 1 cut(s) 512
BbvI GCAGC 6 cut(s) 151, 367, 416, 611, 942, 1154
BccI CCATC 3 cut(s) 191, 822, 1108
BcgI CGANNNNNNTGC 2 cut(s) 919, 953
BciT130I CCWGG 1 cut(s) 1050
BcoDI GTCTC 1 cut(s) 805
BcuI ACTAGT 1 cut(s) 772
BfaI CTAG 4 cut(s) 473, 477, 773, 825
BfmI CTRYAG 2 cut(s) 552, 953
BfuAI ACCTGC 1 cut(s) 1387
BglII AGATCT 2 cut(s) 960, 1156
BisI GCNGC 6 cut(s) 165, 381, 405, 625, 931, 1168
BlsI GCNGC 6 cut(s) 166, 382, 406, 626, 932, 1169
Bme1390I CCNGG 1 cut(s) 1050
Bme18I GGWCC 1 cut(s) 469
BmeRI GACNNNNNGTC 1 cut(s) 776
BmgT120I GGNCC 1 cut(s) 469
BmiI GGNNCC 6 cut(s) 337, 652, 909, 1006, 1037, 1404
BmrFI CCNGG 1 cut(s) 1050
BmsI GCATC 2 cut(s) 151, 611
BmtI GCTAGC 1 cut(s) 480
BpmI CTGGAG 2 cut(s) 1023, 1143
Bpu10I CCTNAGC 1 cut(s) 512
BsaI GGTCTC 1 cut(s) 805
BsaJI CCNNGG 1 cut(s) 155
BsaWI WCCGGW 1 cut(s) 588
BsaXI ACNNNNNCTCC 4 cut(s) 950, 980, 996, 1026
Bsc4I CCNNNNNNNGG 1 cut(s) 1014
Bse118I RCCGGY 1 cut(s) 588
Bse1I ACTGG 3 cut(s) 722, 976, 1126
Bse3DI GCAATG 1 cut(s) 350
BseBI CCWGG 1 cut(s) 1050
BseDI CCNNGG 1 cut(s) 155
BseGI GGATG 3 cut(s) 28, 166, 626
BseLI CCNNNNNNNGG 1 cut(s) 1014
BseMI GCAATG 1 cut(s) 350
BseMII CTCAG 3 cut(s) 425, 526, 1308
BseNI ACTGG 3 cut(s) 722, 976, 1126
BseXI GCAGC 6 cut(s) 151, 367, 416, 611, 942, 1154
BseYI CCCAGC 1 cut(s) 399
BsgI GTGCAG 1 cut(s) 285
Bsh1236I CGCG 1 cut(s) 1106
BshFI GGCC 2 cut(s) 975, 989
BshNI GGYRCC 1 cut(s) 335
BshTI ACCGGT 1 cut(s) 588
BsiSI CCGG 2 cut(s) 589, 1325
BslFI GGGAC 1 cut(s) 136
BslI CCNNNNNNNGG 1 cut(s) 1014
BsmAI GTCTC 1 cut(s) 805
BsmFI GGGAC 1 cut(s) 136
BsmI GAATGC 1 cut(s) 857
BsnI GGCC 2 cut(s) 975, 989
Bso31I GGTCTC 1 cut(s) 805
Bsp1407I TGTACA 1 cut(s) 1071
Bsp143I GATC 5 cut(s) 874, 960, 1035, 1156, 1184
BspANI GGCC 2 cut(s) 975, 989
BspCNI CTCAG 3 cut(s) 424, 525, 1307
BspFNI CGCG 1 cut(s) 1106
BspLI GGNNCC 6 cut(s) 337, 652, 909, 1006, 1037, 1404
BspMI ACCTGC 1 cut(s) 1387
BspOI GCTAGC 1 cut(s) 480
BspPI GGATC 3 cut(s) 1030, 1043, 1192
BspT107I GGYRCC 1 cut(s) 335
BspTNI GGTCTC 1 cut(s) 805
BsrDI GCAATG 1 cut(s) 350
BsrFI RCCGGY 1 cut(s) 588
BsrGI TGTACA 1 cut(s) 1071
BsrI ACTGG 3 cut(s) 722, 976, 1126
BssAI RCCGGY 1 cut(s) 588
BssECI CCNNGG 1 cut(s) 155
BssMI GATC 5 cut(s) 874, 960, 1035, 1156, 1184
BssSI CACGAG 3 cut(s) 964, 1210, 1254
BssT1I CCWWGG 1 cut(s) 155
Bst2BI CACGAG 3 cut(s) 964, 1210, 1254
Bst2UI CCWGG 1 cut(s) 1050
Bst4CI ACNGT 5 cut(s) 58, 150, 172, 361, 371
Bst6I CTCTTC 2 cut(s) 12, 346
BstAPI GCANNNNNTGC 1 cut(s) 854
BstAUI TGTACA 1 cut(s) 1071
BstC8I GCNNGC 7 cut(s) 220, 268, 317, 478, 559, 991, 1221
BstDEI CTNAG 3 cut(s) 411, 512, 1294
BstF5I GGATG 3 cut(s) 28, 166, 626
BstFNI CGCG 1 cut(s) 1106
BstHHI GCGC 3 cut(s) 882, 1108, 1172
BstKTI GATC 5 cut(s) 877, 963, 1038, 1159, 1187
BstMAI GTCTC 1 cut(s) 805
BstMBI GATC 5 cut(s) 874, 960, 1035, 1156, 1184
BstMWI GCNNNNNNNGC 2 cut(s) 854, 893
BstNI CCWGG 1 cut(s) 1050
BstNSI RCATGY 3 cut(s) 319, 427, 569
BstSCI CCNGG 1 cut(s) 1048
BstSFI CTRYAG 2 cut(s) 552, 953
BstUI CGCG 1 cut(s) 1106
BstV1I GCAGC 6 cut(s) 151, 367, 416, 611, 942, 1154
BstX2I RGATCY 3 cut(s) 960, 1035, 1156
BstXI CCANNNNNNTGG 1 cut(s) 775
BstYI RGATCY 3 cut(s) 960, 1035, 1156
BsuRI GGCC 2 cut(s) 975, 989
BtsCI GGATG 3 cut(s) 28, 166, 626
BtsIMutI CAGTG 2 cut(s) 12, 446
BveI ACCTGC 1 cut(s) 1387
Cac8I GCNNGC 7 cut(s) 220, 268, 317, 478, 559, 991, 1221
CaiI CAGNNNCTG 1 cut(s) 272
CfoI GCGC 3 cut(s) 882, 1108, 1172
Cfr10I RCCGGY 1 cut(s) 588
Cfr13I GGNCC 1 cut(s) 469
Csp6I GTAC 5 cut(s) 54, 336, 586, 1072, 1251
CspAI ACCGGT 1 cut(s) 588
CspCI CAANNNNNGTGG 2 cut(s) 447, 482
CviAII CATG 9 cut(s) 260, 316, 424, 566, 708, 883, 1057, 1198, 1366
CviQI GTAC 5 cut(s) 54, 336, 586, 1072, 1251
DdeI CTNAG 3 cut(s) 411, 512, 1294
DpnI GATC 5 cut(s) 876, 962, 1037, 1158, 1186
DpnII GATC 5 cut(s) 874, 960, 1035, 1156, 1184
DriI GACNNNNNGTC 1 cut(s) 776
EaeI YGGCCR 1 cut(s) 973
Eam1104I CTCTTC 2 cut(s) 12, 346
Eam1105I GACNNNNNGTC 1 cut(s) 776
EarI CTCTTC 2 cut(s) 12, 346
Eco130I CCWWGG 1 cut(s) 155
Eco147I AGGCCT 1 cut(s) 989
Eco31I GGTCTC 1 cut(s) 805
Eco47I GGWCC 1 cut(s) 469
Eco57I CTGAAG 2 cut(s) 36, 1220
EcoRI GAATTC 1 cut(s) 451
EcoRII CCWGG 1 cut(s) 1048
EcoT14I CCWWGG 1 cut(s) 155
ErhI CCWWGG 1 cut(s) 155
FaeI CATG 9 cut(s) 263, 319, 427, 569, 711, 886, 1060, 1201, 1369
FaqI GGGAC 1 cut(s) 136
FatI CATG 9 cut(s) 259, 315, 423, 565, 707, 882, 1056, 1197, 1365
FauNDI CATATG 1 cut(s) 81
FblI GTMKAC 1 cut(s) 1287
Fnu4HI GCNGC 6 cut(s) 165, 381, 405, 625, 931, 1168
FokI GGATG 3 cut(s) 35, 173, 633
Fsp4HI GCNGC 6 cut(s) 165, 381, 405, 625, 931, 1168
FspBI CTAG 4 cut(s) 473, 477, 773, 825
FspI TGCGCA 2 cut(s) 881, 1171
GlaI GCGC 3 cut(s) 881, 1107, 1171
GluI GCNGC 6 cut(s) 165, 381, 405, 625, 931, 1168
GsaI CCCAGC 1 cut(s) 403
GsuI CTGGAG 2 cut(s) 1023, 1143
HaeIII GGCC 2 cut(s) 975, 989
HapII CCGG 2 cut(s) 589, 1325
HhaI GCGC 3 cut(s) 882, 1108, 1172
Hin1II CATG 9 cut(s) 263, 319, 427, 569, 711, 886, 1060, 1201, 1369
Hin6I GCGC 3 cut(s) 880, 1106, 1170
HinP1I GCGC 3 cut(s) 880, 1106, 1170
HindIII AAGCTT 2 cut(s) 676, 1192
HinfI GANTC 3 cut(s) 8, 26, 1257
HpaII CCGG 2 cut(s) 589, 1325
HphI GGTGA 2 cut(s) 25, 1129
Hpy166II GTNNAC 6 cut(s) 114, 969, 1253, 1288, 1337, 1391
Hpy188I TCNGA 2 cut(s) 135, 650
Hpy188III TCNNGA 2 cut(s) 724, 825
Hpy8I GTNNAC 6 cut(s) 114, 969, 1253, 1288, 1337, 1391
HpyAV CCTTC 1 cut(s) 979
HpyCH4III ACNGT 5 cut(s) 58, 150, 172, 361, 371
HpyF10VI GCNNNNNNNGC 2 cut(s) 854, 893
HpyF3I CTNAG 3 cut(s) 411, 512, 1294
Hsp92II CATG 9 cut(s) 263, 319, 427, 569, 711, 886, 1060, 1201, 1369
HspAI GCGC 3 cut(s) 880, 1106, 1170
KpnI GGTACC 1 cut(s) 339
Kzo9I GATC 5 cut(s) 874, 960, 1035, 1156, 1184
LmnI GCTCC 3 cut(s) 1004, 1387, 1402
Lsp1109I GCAGC 6 cut(s) 151, 367, 416, 611, 942, 1154
LweI GCATC 2 cut(s) 151, 611
MaeI CTAG 4 cut(s) 473, 477, 773, 825
MaeIII GTNAC 6 cut(s) 58, 365, 547, 1117, 1297, 1354
MalI GATC 5 cut(s) 876, 962, 1037, 1158, 1186
MboI GATC 5 cut(s) 874, 960, 1035, 1156, 1184
MboII GAAGA 5 cut(s) 29, 60, 288, 333, 604
MflI RGATCY 3 cut(s) 960, 1035, 1156
MlsI TGGCCA 1 cut(s) 975
MluCI AATT 5 cut(s) 251, 327, 436, 451, 915
MluNI TGGCCA 1 cut(s) 975
MlyI GAGTC 1 cut(s) 1266
MmeI TCCRAC 1 cut(s) 1399
MnlI CCTC 6 cut(s) 13, 51, 349, 521, 947, 1416
Mox20I TGGCCA 1 cut(s) 975
MscI TGGCCA 1 cut(s) 975
MseI TTAA 6 cut(s) 390, 495, 668, 1067, 1190, 1397
MslI CAYNNNNRTG 4 cut(s) 428, 1177, 1278, 1346
Msp20I TGGCCA 1 cut(s) 975
MspI CCGG 2 cut(s) 589, 1325
MspR9I CCNGG 1 cut(s) 1050
Mva1269I GAATGC 1 cut(s) 857
MvaI CCWGG 1 cut(s) 1050
MvnI CGCG 1 cut(s) 1106
MwoI GCNNNNNNNGC 2 cut(s) 854, 893
NdeI CATATG 1 cut(s) 81
NdeII GATC 5 cut(s) 874, 960, 1035, 1156, 1184
NheI GCTAGC 1 cut(s) 476
NlaIII CATG 9 cut(s) 263, 319, 427, 569, 711, 886, 1060, 1201, 1369
NlaIV GGNNCC 6 cut(s) 337, 652, 909, 1006, 1037, 1404
NmuCI GTSAC 4 cut(s) 58, 547, 1117, 1297
NsbI TGCGCA 2 cut(s) 881, 1171
NspI RCATGY 3 cut(s) 319, 427, 569
PaeI GCATGC 1 cut(s) 319
PceI AGGCCT 1 cut(s) 989
PciI ACATGT 1 cut(s) 423
PctI GAATGC 1 cut(s) 857
PfeI GAWTC 2 cut(s) 8, 26
PflMI CCANNNNNTGG 1 cut(s) 1014
PinAI ACCGGT 1 cut(s) 588
PkrI GCNGC 6 cut(s) 166, 382, 406, 626, 932, 1169
PleI GAGTC 1 cut(s) 1265
PpsI GAGTC 1 cut(s) 1265
PscI ACATGT 1 cut(s) 423
Psp6I CCWGG 1 cut(s) 1048
PspFI CCCAGC 1 cut(s) 399
PspGI CCWGG 1 cut(s) 1048
PspN4I GGNNCC 6 cut(s) 337, 652, 909, 1006, 1037, 1404
PspPI GGNCC 1 cut(s) 469
PstNI CAGNNNCTG 1 cut(s) 272
PsuI RGATCY 3 cut(s) 960, 1035, 1156
RsaI GTAC 5 cut(s) 55, 337, 587, 1073, 1252
RsaNI GTAC 5 cut(s) 54, 336, 586, 1072, 1251
RseI CAYNNNNRTG 4 cut(s) 428, 1177, 1278, 1346
SaqAI TTAA 6 cut(s) 390, 495, 668, 1067, 1190, 1397
SatI GCNGC 6 cut(s) 165, 381, 405, 625, 931, 1168
Sau3AI GATC 5 cut(s) 874, 960, 1035, 1156, 1184
Sau96I GGNCC 1 cut(s) 469
SchI GAGTC 1 cut(s) 1266
ScrFI CCNGG 1 cut(s) 1050
SfaNI GCATC 2 cut(s) 151, 611
SfcI CTRYAG 2 cut(s) 552, 953
SinI GGWCC 1 cut(s) 469
SmiMI CAYNNNNRTG 4 cut(s) 428, 1177, 1278, 1346
SpeI ACTAGT 1 cut(s) 772
SphI GCATGC 1 cut(s) 319
Sse9I AATT 5 cut(s) 251, 327, 436, 451, 915
SseBI AGGCCT 1 cut(s) 989
SspMI CTAG 4 cut(s) 473, 477, 773, 825
StuI AGGCCT 1 cut(s) 989
StyD4I CCNGG 1 cut(s) 1048
StyI CCWWGG 1 cut(s) 155
TaaI ACNGT 5 cut(s) 58, 150, 172, 361, 371
TaqI TCGA 2 cut(s) 484, 1149
TasI AATT 5 cut(s) 251, 327, 436, 451, 915
TatI WGTACW 3 cut(s) 53, 1071, 1250
TfiI GAWTC 2 cut(s) 8, 26
Tru1I TTAA 6 cut(s) 390, 495, 668, 1067, 1190, 1397
Tru9I TTAA 6 cut(s) 390, 495, 668, 1067, 1190, 1397
TscAI CASTG 2 cut(s) 19, 453
TseFI GTSAC 4 cut(s) 58, 547, 1117, 1297
TseI GCWGC 6 cut(s) 164, 380, 404, 624, 930, 1167
Tsp45I GTSAC 4 cut(s) 58, 547, 1117, 1297
TspDTI ATGAA 7 cut(s) 18, 333, 604, 632, 696, 1186, 1382
TspGWI ACGGA 1 cut(s) 289
TspRI CASTG 2 cut(s) 19, 453
Van91I CCANNNNNTGG 1 cut(s) 1014
VpaK11BI GGWCC 1 cut(s) 469
XapI RAATTY 2 cut(s) 327, 451
XbaI TCTAGA 1 cut(s) 824
XceI RCATGY 3 cut(s) 319, 427, 569
XmiI GTMKAC 1 cut(s) 1287
XspI CTAG 4 cut(s) 473, 477, 773, 825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.