RorugPtG0001000
ERF Family

Major facilitator superfamily domain-containing protein 12-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000008
OG0005390
Physical Location & Seq
Reverse (-)
23442 .. 25859
2418 bp
Loading structure...
UTR
Exon/CDS
Intron
RorugPtG0001000.1

Sequence Viewer

Length: 2418 bp
ATGAACCGAAGGCTGAATCTTGATATCCCTCAGAACAACACATTTTTGTTACCGCGAGATATATTGGCAGCCGCGGATCATTTGATTGGAATGAAATTTGGAATGGGTACACTTGACGATATGAATCATTTGAAAAATAAACGTATTCGGTCTGTCGCCGATCTTTTACAAGACCAATTCGGATTGGCCCTGGTTCGTTTAGAAAATATGGTTAGAGGGACTATATGCGGAGCAATTAAGCATAAATTGATACCCACTCCTCAGAATTTGGTAACTTCAACTCCATTAACAACCACTTATGAATCTTTTTTTGGATTACACCCATTATCTCAAGTTTTGGATCAAACTAATCCATTGACCCAAATAGTTCATGGGAGAAAATCGAGTTATCTGGGCCCTGGAGGATTGACAGGGCGAACTGCTAGTTTTCGGATACGAGATATTCACCCCAGTCACTACGGACGCATTTGCCCCATTGACACGTCTGAAGGAATCAATGTTGGACTTATTGGATCCTTAGCAATTCATGCGAAGATTGGTTATTGGGGGTCTCTAGAAAGTCCGTTTTATGAAATTTCTGAGAGATCAAAAAAAGTACGGATGCTTTATTTATCACCAAGTAAAGATGAATACTATATGATAGCGGCAGGAAATTCTTTGGCCTTGAATCGAGGTATTCAGGAAGAACAGGTTGTTCCAGCTCGATACCGTCAAGAATTCCTGACTGTTGAATGGGAACAGGTTCATCTTCGAAGTATTTTTCCCTTCCAATATTTTTCTATTGGAGCTTCCCTGATTCCCTTTATTGAGCATAATGATGCGAATCGAGCTTTAATGAGTTCTAATATGCAACGTCAAGCAGTTCCGCTCTCTCGGTCTGAAAAGTGCATTGTTGGAACTGGGTTGGAACGCCAAGTGGCTTTAGATTCCGGGGTTCCCGCTATAGCCGAACATGAGGGAAAGATCATTTATACGGATACTGACAAGATAATTTTATCGGGCAATGGGGATACTCTAAACATTCCATTAGTTATATACCAACGTTCCAACAAAAATACGTGTATGCACCAAAAACACCAGGTTCAGCGAGGTAAATGTATTAAAAAGGGACAAATTTTAGCGGATGGTGCTGCTACGGTTGGTGGCGAACTCGCTTTGGGAAAAAATGTATTAGTAGCTTATATGCCGTGGGAGGGTTACAATTCTGAAGATGCGGTACTTATTAGTGAGCGTCTGGTATATGGAGATATTTATACTTCTTTTCACATAAAGAAATATGAAATTCAGACTCATGTGACAAGCAACGGTCCTGAAAGAATTACTAATGAAATACCACATCTAGAAGCCCATTTACTCCGCAATTTAGACAAAAATGGAATTGTGAGGCTGGGATCCTGGGTAAAGACGGGTGATATTTTAGTAGGTAAATTAACGCCGCAGATGGCGAAAGAATCGTCATATGCTCCGGAAGATAGATTATTACGAGCCATACTTGGCATTCAGGTATCCACTTCAAAGGAAACTTGTCTAAAATTACCGATAGGTGGTAGAGGTCGAGTTATTGATGTAAGATGGATCCAGAAAAAGGGAGGTTCTAGTTATAATCCAGAAACGATTCGTGTATATATTTCACAAAAACGTGAAATCAAAGTAGGTGATAAAGTAGCTGGAAGACATGGAAATAAGGGTATCGTTTCAAAAATTTTACCTAGACAAGATATGCCTTATTTGCAAGATGGAAGACCTGTTGATATGGTCTTCAACCCATTAGGAGTGCCTTCGCGAATGAATGTAGGACAGATATTTGAATGCTCACTCGGGTTAGCGGGAGGTCTGCTAGATAGACATTATCGAATAGCACCTTTTGATGAGAGATATGAACAAGAGGCTTCAAGAAAACTGGTGTTTTCTGAATTATATGAAGCCAGTAAGCAAACAGCGAATCCATGGGTATTTGAACCTGAGTATCCGGGAAAAAGCAGAATATTTGATGGAAGAACGGGGGATCCTTTTGAACAACCTGTTATAATAGGAAAGCCTTATATCTTGAAATTAATTCATCAAGTTGATGATAAAATACATGGACGTTCCAGTGGACATTATGCACTTGTTACACAACAACCCCTTAGAGGAAGGGCCAAGCAAGGGGGACAACGGGTAGGAGAAATGGAAGTTTGGGCTCTAGAGGGATTTGGTGTTGCTCATATTTTACAAGAGATGCTTACTTATAAATCGGATCATATTAGAGCTCGTCAAGAAGTACTTGGTACTACAATCATTGGAGGGACAATACCTCAACCCGCGGATGCTCCCGAATCTTTTCGATTGCTCGTGCGAGAACTACGATCTTTGGCTCTGGAACTGAACCATTTCCTTGTATCTGAGAAGAACTTCCAGATTAATAGGAAGGAAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_2

Protein Analysis

805

Amino Acids

90.16

Weight (kDa)

9.19

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RNA_pol_Rpb2_2 PF04561 1 - 50 1.5e-12 RNA polymerase Rpb2, domain 2
RNA_pol_Rpb2_3 PF04565 111 - 179 4.1e-23 RNA polymerase Rpb2, domain 3
RNA_pol_Rpb2_6 PF00562 316 - 714 1.1e-102 RNA polymerase Rpb2, domain 6
RNA_pol_Rpb2_7 PF04560 716 - 791 2.6e-22 RNA polymerase Rpb2, domain 7
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1602, 2027, 2229
AccBSI CCGCTC 1 cut(s) 868
AccII CGCG 4 cut(s) 55, 74, 1783, 2303
AccIII TCCGGA 1 cut(s) 1465
AclI AACGTT 1 cut(s) 1042
AcsI RAATTY 8 cut(s) 95, 265, 573, 652, 716, 1113, 1281, 1701
AcuI CTGAAG 2 cut(s) 507, 1227
AfaI GTAC 5 cut(s) 109, 597, 1218, 2262, 2269
AfiI CCNNNNNNNGG 5 cut(s) 1193, 1544, 1585, 2129, 2145
AflIII ACRYGT 2 cut(s) 480, 1058
AjiI CACGTC 1 cut(s) 483
AjnI CCWGG 4 cut(s) 189, 397, 1077, 1394
AjuI GAANNNNNNNTTGG 2 cut(s) 294, 326
AloI GAACNNNNNNTCC 2 cut(s) 1990, 2022
AluBI AGCT 7 cut(s) 701, 788, 830, 1178, 1667, 2249, 2414
AluI AGCT 7 cut(s) 701, 788, 830, 1178, 1667, 2249, 2414
Alw21I GWGCWC 1 cut(s) 2251
Alw26I GTCTC 1 cut(s) 555
Ama87I CYCGRG 1 cut(s) 1817
Aor13HI TCCGGA 1 cut(s) 1465
AoxI GGCC 4 cut(s) 186, 394, 660, 2136
ApaI GGGCCC 1 cut(s) 398
ApeKI GCWGC 2 cut(s) 68, 1130
ApoI RAATTY 8 cut(s) 95, 265, 573, 652, 716, 1113, 1281, 1701
ArsI GACNNNNNNTTYG 2 cut(s) 1439, 1471
AseI ATTAAT 2 cut(s) 2054, 2400
Asp700I GAANNNNTTC 5 cut(s) 741, 1614, 2319, 2369, 2390
AspS9I GGNCC 5 cut(s) 187, 394, 395, 1307, 2136
AsuC2I CCSGG 2 cut(s) 931, 1971
AsuHPI GGTGA 4 cut(s) 437, 606, 1421, 1667
AsuII TTCGAA 1 cut(s) 751
AvaI CYCGRG 1 cut(s) 1817
AvaII GGWCC 1 cut(s) 1307
BaeGI GKGCMC 1 cut(s) 398
BaeI ACNNNNGTAYC 2 cut(s) 1949, 1982
BamHI GGATCC 4 cut(s) 512, 1391, 1575, 2005
BanII GRGCYC 3 cut(s) 398, 2182, 2251
BarI GAAGNNNNNNTAC 4 cut(s) 1200, 1232, 1335, 1367
BauI CACGAG 1 cut(s) 2330
BbsI GAAGAC 3 cut(s) 1678, 1747, 1750
Bbv12I GWGCWC 1 cut(s) 2251
BbvI GCAGC 2 cut(s) 80, 1117
BccI CCATC 5 cut(s) 1118, 1435, 1566, 1730, 1985
BceAI ACGGC 1 cut(s) 1171
BciT130I CCWGG 4 cut(s) 191, 399, 1079, 1396
BciVI GTATCC 5 cut(s) 426, 970, 1003, 1516, 1977
BcnI CCSGG 2 cut(s) 931, 1971
BcoDI GTCTC 1 cut(s) 555
BfaI CTAG 7 cut(s) 423, 554, 1340, 1596, 1710, 1838, 2183
BfmI CTRYAG 1 cut(s) 942
BfuI GTATCC 5 cut(s) 426, 970, 1003, 1516, 1977
BisI GCNGC 5 cut(s) 69, 72, 645, 1131, 1436
BlsI GCNGC 5 cut(s) 70, 73, 646, 1132, 1437
BmcAI AGTACT 1 cut(s) 2262
Bme1390I CCNGG 6 cut(s) 191, 399, 931, 1079, 1396, 1971
Bme18I GGWCC 1 cut(s) 1307
BmeT110I CYCGRG 1 cut(s) 1817
BmgBI CACGTC 1 cut(s) 483
BmgT120I GGNCC 5 cut(s) 187, 394, 395, 1307, 2136
BmiI GGNNCC 6 cut(s) 396, 514, 936, 1393, 1577, 2007
BmrFI CCNGG 6 cut(s) 191, 399, 931, 1079, 1396, 1971
BmrI ACTGGG 2 cut(s) 444, 909
BmsI GCATC 5 cut(s) 591, 808, 1201, 2208, 2296
BmuI ACTGGG 2 cut(s) 444, 909
BpiI GAAGAC 3 cut(s) 1678, 1747, 1750
BpmI CTGGAG 1 cut(s) 420
Bpu10I CCTNAGC 1 cut(s) 517
Bpu14I TTCGAA 1 cut(s) 751
BpuEI CTTGAG 1 cut(s) 315
BpuMI CCSGG 2 cut(s) 931, 1971
BsaAI YACGTR 1 cut(s) 1059
BsaBI GATNNNNATC 2 cut(s) 123, 822
BsaI GGTCTC 1 cut(s) 555
BsaJI CCNNGG 8 cut(s) 72, 189, 397, 930, 1187, 1395, 1946, 2301
BsaWI WCCGGW 1 cut(s) 1465
BsaXI ACNNNNNCTCC 2 cut(s) 265, 295
Bsc4I CCNNNNNNNGG 5 cut(s) 1193, 1544, 1585, 2129, 2145
Bse1I ACTGG 5 cut(s) 450, 904, 1905, 1926, 2091
Bse3DI GCAATG 1 cut(s) 1009
Bse8I GATNNNNATC 2 cut(s) 123, 822
BseAI TCCGGA 1 cut(s) 1465
BseBI CCWGG 4 cut(s) 191, 399, 1079, 1396
BseDI CCNNGG 8 cut(s) 72, 189, 397, 930, 1187, 1395, 1946, 2301
BseGI GGATG 3 cut(s) 606, 1129, 2311
BseJI GATNNNNATC 2 cut(s) 123, 822
BseLI CCNNNNNNNGG 5 cut(s) 1193, 1544, 1585, 2129, 2145
BseMI GCAATG 1 cut(s) 1009
BseMII CTCAG 5 cut(s) 44, 275, 570, 1953, 2373
BseNI ACTGG 5 cut(s) 450, 904, 1905, 1926, 2091
BseRI GAGGAG 1 cut(s) 249
BseSI GKGCMC 1 cut(s) 398
BseXI GCAGC 2 cut(s) 80, 1117
BseYI CCCAGC 1 cut(s) 1387
Bsh1236I CGCG 4 cut(s) 55, 74, 1783, 2303
BshFI GGCC 4 cut(s) 188, 396, 662, 2138
BsiHKAI GWGCWC 1 cut(s) 2251
BsiHKCI CYCGRG 1 cut(s) 1817
BsiSI CCGG 3 cut(s) 930, 1466, 1970
BslFI GGGAC 4 cut(s) 232, 1122, 2163, 2299
BslI CCNNNNNNNGG 5 cut(s) 1193, 1544, 1585, 2129, 2145
BsmAI GTCTC 1 cut(s) 555
BsmFI GGGAC 4 cut(s) 232, 1122, 2163, 2299
BsmI GAATGC 2 cut(s) 1497, 1814
BsnI GGCC 4 cut(s) 188, 396, 662, 2138
Bso31I GGTCTC 1 cut(s) 555
BsoBI CYCGRG 1 cut(s) 1817
Bsp119I TTCGAA 1 cut(s) 751
Bsp120I GGGCCC 1 cut(s) 394
Bsp1286I GDGCHC 3 cut(s) 398, 2182, 2251
Bsp13I TCCGGA 1 cut(s) 1465
Bsp19I CCATGG 1 cut(s) 1946
Bsp68I TCGCGA 1 cut(s) 1783
BspANI GGCC 4 cut(s) 188, 396, 662, 2138
BspCNI CTCAG 5 cut(s) 43, 274, 571, 1954, 2374
BspEI TCCGGA 1 cut(s) 1465
BspFNI CGCG 4 cut(s) 55, 74, 1783, 2303
BspLI GGNNCC 6 cut(s) 396, 514, 936, 1393, 1577, 2007
BspT104I TTCGAA 1 cut(s) 751
BspTNI GGTCTC 1 cut(s) 555
BsrBI CCGCTC 1 cut(s) 868
BsrDI GCAATG 1 cut(s) 1009
BsrI ACTGG 5 cut(s) 450, 904, 1905, 1926, 2091
BssECI CCNNGG 8 cut(s) 72, 189, 397, 930, 1187, 1395, 1946, 2301
BssSI CACGAG 1 cut(s) 2330
BssT1I CCWWGG 1 cut(s) 1946
Bst2BI CACGAG 1 cut(s) 2330
Bst2UI CCWGG 4 cut(s) 191, 399, 1079, 1396
Bst4CI ACNGT 4 cut(s) 710, 727, 1138, 1307
BstAPI GCANNNNNTGC 1 cut(s) 527
BstBAI YACGTR 1 cut(s) 1059
BstBI TTCGAA 1 cut(s) 751
BstDEI CTNAG 7 cut(s) 30, 261, 517, 579, 1962, 2126, 2382
BstDSI CCRYGG 4 cut(s) 72, 1187, 1946, 2301
BstF5I GGATG 3 cut(s) 606, 1129, 2311
BstFNI CGCG 4 cut(s) 55, 74, 1783, 2303
BstMAI GTCTC 1 cut(s) 555
BstMWI GCNNNNNNNGC 4 cut(s) 527, 827, 1127, 1729
BstNI CCWGG 4 cut(s) 191, 399, 1079, 1396
BstSCI CCNGG 6 cut(s) 189, 397, 929, 1077, 1394, 1969
BstSFI CTRYAG 1 cut(s) 942
BstSLI GKGCMC 1 cut(s) 398
BstUI CGCG 4 cut(s) 55, 74, 1783, 2303
BstV1I GCAGC 2 cut(s) 80, 1117
BstV2I GAAGAC 3 cut(s) 1678, 1747, 1750
BstX2I RGATCY 4 cut(s) 512, 1391, 1575, 2005
BstYI RGATCY 4 cut(s) 512, 1391, 1575, 2005
BsuI GTATCC 5 cut(s) 426, 970, 1003, 1516, 1977
BsuRI GGCC 4 cut(s) 188, 396, 662, 2138
BtgI CCRYGG 4 cut(s) 72, 1187, 1946, 2301
BtrI CACGTC 1 cut(s) 483
BtsCI GGATG 3 cut(s) 606, 1129, 2311
BtsIMutI CAGTG 1 cut(s) 2098
BtuMI TCGCGA 1 cut(s) 1783
Cfr13I GGNCC 5 cut(s) 187, 394, 395, 1307, 2136
Cfr42I CCGCGG 2 cut(s) 75, 2304
CseI GACGC 2 cut(s) 471, 1220
CsiI ACCWGGT 1 cut(s) 1077
Csp6I GTAC 5 cut(s) 108, 596, 1217, 2261, 2268
CviAII CATG 7 cut(s) 371, 527, 953, 1292, 1676, 1947, 2081
CviQI GTAC 5 cut(s) 108, 596, 1217, 2261, 2268
DdeI CTNAG 7 cut(s) 30, 261, 517, 579, 1962, 2126, 2382
Ecl136II GAGCTC 1 cut(s) 2249
Eco130I CCWWGG 1 cut(s) 1946
Eco24I GRGCYC 3 cut(s) 398, 2182, 2251
Eco31I GGTCTC 1 cut(s) 555
Eco32I GATATC 1 cut(s) 25
Eco47I GGWCC 1 cut(s) 1307
Eco53kI GAGCTC 1 cut(s) 2249
Eco57I CTGAAG 2 cut(s) 507, 1227
Eco88I CYCGRG 1 cut(s) 1817
EcoICRI GAGCTC 1 cut(s) 2249
EcoO109I RGGNCCY 1 cut(s) 395
EcoRI GAATTC 1 cut(s) 716
EcoRII CCWGG 4 cut(s) 189, 397, 1077, 1394
EcoRV GATATC 1 cut(s) 25
EcoT14I CCWWGG 1 cut(s) 1946
EcoT38I GRGCYC 3 cut(s) 398, 2182, 2251
ErhI CCWWGG 1 cut(s) 1946
FaeI CATG 7 cut(s) 374, 530, 956, 1295, 1679, 1950, 2084
FalI AAGNNNNNCTT 4 cut(s) 2205, 2237, 2247, 2279
FaqI GGGAC 4 cut(s) 232, 1122, 2163, 2299
FatI CATG 7 cut(s) 370, 526, 952, 1291, 1675, 1946, 2080
FauI CCCGC 3 cut(s) 946, 1819, 2308
FauNDI CATATG 1 cut(s) 1459
Fnu4HI GCNGC 5 cut(s) 69, 72, 645, 1131, 1436
FokI GGATG 3 cut(s) 613, 1136, 2318
FriOI GRGCYC 3 cut(s) 398, 2182, 2251
Fsp4HI GCNGC 5 cut(s) 69, 72, 645, 1131, 1436
FspBI CTAG 7 cut(s) 423, 554, 1340, 1596, 1710, 1838, 2183
GluI GCNGC 5 cut(s) 69, 72, 645, 1131, 1436
GsaI CCCAGC 1 cut(s) 1391
GsuI CTGGAG 1 cut(s) 420
HaeIII GGCC 4 cut(s) 188, 396, 662, 2138
HapII CCGG 3 cut(s) 930, 1466, 1970
HgaI GACGC 2 cut(s) 471, 1220
Hin1II CATG 7 cut(s) 374, 530, 956, 1295, 1679, 1950, 2084
HindIII AAGCTT 1 cut(s) 2412
HpaII CCGG 3 cut(s) 930, 1466, 1970
HphI GGTGA 4 cut(s) 437, 606, 1421, 1667
Hpy166II GTNNAC 2 cut(s) 110, 2096
Hpy8I GTNNAC 2 cut(s) 110, 2096
HpyAV CCTTC 6 cut(s) 3, 482, 775, 1788, 2127, 2401
HpyCH4III ACNGT 4 cut(s) 710, 727, 1138, 1307
HpyCH4IV ACGT 7 cut(s) 142, 482, 853, 1042, 1058, 1639, 2086
HpyCH4V TGCA 5 cut(s) 850, 888, 1066, 1732, 2105
HpyF10VI GCNNNNNNNGC 4 cut(s) 527, 827, 1127, 1729
HpyF3I CTNAG 7 cut(s) 30, 261, 517, 579, 1962, 2126, 2382
HpySE526I ACGT 7 cut(s) 142, 482, 853, 1042, 1058, 1639, 2086
Hsp92II CATG 7 cut(s) 374, 530, 956, 1295, 1679, 1950, 2084
Kpn2I TCCGGA 1 cut(s) 1465
KspI CCGCGG 2 cut(s) 75, 2304
LmnI GCTCC 4 cut(s) 230, 785, 1468, 2314
Lsp1109I GCAGC 2 cut(s) 80, 1117
LweI GCATC 5 cut(s) 591, 808, 1201, 2208, 2296
MabI ACCWGGT 1 cut(s) 1077
MaeI CTAG 7 cut(s) 423, 554, 1340, 1596, 1710, 1838, 2183
MaeII ACGT 7 cut(s) 142, 482, 853, 1042, 1058, 1639, 2086
MaeIII GTNAC 6 cut(s) 48, 271, 452, 1196, 1294, 2110
MbiI CCGCTC 1 cut(s) 868
MflI RGATCY 4 cut(s) 512, 1391, 1575, 2005
MhlI GDGCHC 3 cut(s) 398, 2182, 2251
MlyI GAGTC 1 cut(s) 1282
MmeI TCCRAC 4 cut(s) 481, 874, 885, 1071
MroI TCCGGA 1 cut(s) 1465
MroXI GAANNNNTTC 5 cut(s) 741, 1614, 2319, 2369, 2390
MseI TTAA 8 cut(s) 237, 287, 833, 1101, 1430, 2054, 2400, 2416
MslI CAYNNNNRTG 1 cut(s) 816
MspA1I CMGCKG 2 cut(s) 74, 2303
MspI CCGG 3 cut(s) 930, 1466, 1970
MspR9I CCNGG 6 cut(s) 191, 399, 931, 1079, 1396, 1971
Mva1269I GAATGC 2 cut(s) 1497, 1814
MvaI CCWGG 4 cut(s) 191, 399, 1079, 1396
MvnI CGCG 4 cut(s) 55, 74, 1783, 2303
MwoI GCNNNNNNNGC 4 cut(s) 527, 827, 1127, 1729
NciI CCSGG 2 cut(s) 931, 1971
NcoI CCATGG 1 cut(s) 1946
NdeI CATATG 1 cut(s) 1459
NlaIII CATG 7 cut(s) 374, 530, 956, 1295, 1679, 1950, 2084
NlaIV GGNNCC 6 cut(s) 396, 514, 936, 1393, 1577, 2007
NmuCI GTSAC 2 cut(s) 452, 1294
NruI TCGCGA 1 cut(s) 1783
NspV TTCGAA 1 cut(s) 751
PctI GAATGC 2 cut(s) 1497, 1814
PdmI GAANNNNTTC 5 cut(s) 741, 1614, 2319, 2369, 2390
PfoI TCCNGGA 1 cut(s) 1969
PkrI GCNGC 5 cut(s) 70, 73, 646, 1132, 1437
PleI GAGTC 1 cut(s) 1282
PpsI GAGTC 1 cut(s) 1282
Ppu21I YACGTR 1 cut(s) 1059
PshBI ATTAAT 2 cut(s) 2054, 2400
PsiI TTATAA 3 cut(s) 1602, 2027, 2229
Psp124BI GAGCTC 1 cut(s) 2251
Psp1406I AACGTT 1 cut(s) 1042
Psp6I CCWGG 4 cut(s) 189, 397, 1077, 1394
PspFI CCCAGC 1 cut(s) 1387
PspGI CCWGG 4 cut(s) 189, 397, 1077, 1394
PspN4I GGNNCC 6 cut(s) 396, 514, 936, 1393, 1577, 2007
PspOMI GGGCCC 1 cut(s) 394
PspPI GGNCC 5 cut(s) 187, 394, 395, 1307, 2136
PsuI RGATCY 4 cut(s) 512, 1391, 1575, 2005
RruI TCGCGA 1 cut(s) 1783
RsaI GTAC 5 cut(s) 109, 597, 1218, 2262, 2269
RsaNI GTAC 5 cut(s) 108, 596, 1217, 2261, 2268
RseI CAYNNNNRTG 1 cut(s) 816
SacI GAGCTC 1 cut(s) 2251
SacII CCGCGG 2 cut(s) 75, 2304
SaqAI TTAA 8 cut(s) 237, 287, 833, 1101, 1430, 2054, 2400, 2416
SatI GCNGC 5 cut(s) 69, 72, 645, 1131, 1436
Sau96I GGNCC 5 cut(s) 187, 394, 395, 1307, 2136
ScaI AGTACT 1 cut(s) 2262
SchI GAGTC 1 cut(s) 1282
ScrFI CCNGG 6 cut(s) 191, 399, 931, 1079, 1396, 1971
SduI GDGCHC 3 cut(s) 398, 2182, 2251
SexAI ACCWGGT 1 cut(s) 1077
SfaNI GCATC 5 cut(s) 591, 808, 1201, 2208, 2296
SfcI CTRYAG 1 cut(s) 942
Sfr303I CCGCGG 2 cut(s) 75, 2304
SfuI TTCGAA 1 cut(s) 751
SgrBI CCGCGG 2 cut(s) 75, 2304
SinI GGWCC 1 cut(s) 1307
SmiMI CAYNNNNRTG 1 cut(s) 816
SmlI CTYRAG 1 cut(s) 330
SmoI CTYRAG 1 cut(s) 330
SspI AATATT 2 cut(s) 773, 1986
SspMI CTAG 7 cut(s) 423, 554, 1340, 1596, 1710, 1838, 2183
SstI GAGCTC 1 cut(s) 2251
StyD4I CCNGG 6 cut(s) 189, 397, 929, 1077, 1394, 1969
StyI CCWWGG 1 cut(s) 1946
TaaI ACNGT 4 cut(s) 710, 727, 1138, 1307
TaiI ACGT 7 cut(s) 145, 485, 856, 1045, 1061, 1642, 2089
TaqI TCGA 8 cut(s) 383, 670, 703, 751, 826, 1555, 1852, 2323
TaqII GACCGA 2 cut(s) 138, 864
TatI WGTACW 1 cut(s) 2260
TauI GCSGC 3 cut(s) 74, 647, 1438
Tru1I TTAA 8 cut(s) 237, 287, 833, 1101, 1430, 2054, 2400, 2416
Tru9I TTAA 8 cut(s) 237, 287, 833, 1101, 1430, 2054, 2400, 2416
TscAI CASTG 1 cut(s) 2098
TseFI GTSAC 2 cut(s) 452, 1294
TseI GCWGC 2 cut(s) 68, 1130
Tsp45I GTSAC 2 cut(s) 452, 1294
TspGWI ACGGA 4 cut(s) 474, 552, 613, 989
TspRI CASTG 1 cut(s) 2098
VpaK11BI GGWCC 1 cut(s) 1307
VspI ATTAAT 2 cut(s) 2054, 2400
XapI RAATTY 8 cut(s) 95, 265, 573, 652, 716, 1113, 1281, 1701
XbaI TCTAGA 3 cut(s) 553, 1339, 2182
XcmI CCANNNNNNNNNTGG 1 cut(s) 368
XmnI GAANNNNTTC 5 cut(s) 741, 1614, 2319, 2369, 2390
XspI CTAG 7 cut(s) 423, 554, 1340, 1596, 1710, 1838, 2183
ZrmI AGTACT 1 cut(s) 2262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.