AT3G02020

Aspartokinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
337712 .. 343912
6201 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G02020.1

Sequence Viewer

Length: 1680 bp
ATGGCGGCTTCAATGCAGTTCTACGGAGTTAAAACACCAGAACTTGCCTTAAACTCAAAAAGGATTGAGTTTAGCTCAAAGGGGCTCAACTTCTCAGCACTCGTGTCCTCTGCTCGTGTATTCTCTAGAAACGTAGATCGTTCTTGTAAGAACATCGCTCTGAGAGTTACTTGTGAAGCGGGAAGAGTGGAGCTGCTAGAGAGAAAAGCCTCAGAGACTTTCAAGTTAAACAAAACTGAGAAAAAATTGACCTGTGTAATGAAATTCGGTGGCTCATCAGTGGCATCAGCAGAAAGGATGATACAAGTTGCCAAACTCATACTCAGCTTCCCAGATGAGAAGCCTGTTGTTGTGCTATCAGCAATGGCAAAGACCACCAATAAGCTTTTGATGGCTGGGGAGAAGGCTGTTTGCTGCGGTGTCACCAACGTCGACACTATCGAAGAGTTGAGCTATATAAAGGAACTCCATATAAGGACTGCTCATGAGCTTGGAGTGGAAACAGCAGTTATTGCAGAACATCTAGAAGGACTGGAACAGCTTCTTAAAGGCGTCGCAATGATGAAGGAATTAACTTTACGCTCAAGAGACTACTTGGTTTCATTTGGAGAATGCATGTCCACTAGGCTATTTGCTGCGTACCTGAACAAAATTGGGCACAAAGCACGACAGTATGATGCATTTGAGATCGGGATTATCACCACAGATGACTTCACTAATGCTGATATTCTTGAGGCAACATACCCGGCGGTTTCGAAAAAGTTACTTGGTGACTGGAGCAAGGAAAATGCACTCCCCGTTGTCACAGGCTTCCTTGGAAAGGGATGGAGATCTTGTGCTGTAACTACGCTTGGTAGAGGAGGTAGCGATTTGACTGCAACAACGATCGGGAAGGCTTTAGGTTTGCGGGAGATCCAGGTTTGGAAAGATGTGGATGGAGTTTTGACTTGTGATCCTAACATTTACTGCGGAGCTCAACCTGTTCCACACTTGACATTTGATGAGGCTGCTGAACTTGCTTACTTTGGTGCCCAGGTGTTGCATCCACTTTCCATGCGCCCAGCGCGAGAAGGTAACATTCCTGTAAGGGTTAAGAACTCTTACAATCCCACTGCTCCAGGAACTGTCATCACCAGATCAAGAGACATGAGCAAGGCTGTATTGACCAGCATCGTTCTGAAACGTAATGTCACCATGTTGGACATCACTAGCACCCGTATGCTCGGCCAATATGGTTTCCTTGCCAAGGTGTTTTCCACATTTGAAAAGTTGGGCATATCTGTGGATGTTGTTGCAACCAGCGAAGTTAGCATTTCTTTGACATTGGATCCTTCAAAGTTCTGTAGCAGAGAGTTAATTCAACACGAGCTTGATCAGGTGGTGGAGGAACTTGAGAAGATTGCTGTTGTAAATCTGCTTCGACACAGATCAATTATCTCTCTCATCGGAAATGTTCAGAGATCATCATTCATATTAGAGAAGGGCTTCCGAGTACTTCGAACCAATGGGATTAATGTCCAGATGATCTCCCAAGGTGCATCTAAGGTAAACATCTCACTGATAGTGAATGATGATGAGGCGGAGCATTGTGTGAAGGCTCTCCACTCGGCCTTCTTTGAGACAGACACTTGTGAAGCAGTCTCAGAATGCCCGACCGGCTACATCGCTGCCTCTTCGTGA

Protein Analysis

559

Amino Acids

61.22

Weight (kDa)

8.12

Isoelectric Point (pI)

34.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 84 - 366 2.4e-44 Amino acid kinase family
ACT_9 PF22468 405 - 444 8.8e-06 ACT domain
ACT_9 PF22468 479 - 538 6.4e-15 ACT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1028
AccI GTMKAC 1 cut(s) 432
AccII CGCG 1 cut(s) 1066
AciI CCGC 7 cut(s) 5, 179, 417, 749, 907, 969, 1580
AclWI GGATC 4 cut(s) 907, 947, 1322, 1335
AcoI YGGCCR 1 cut(s) 1225
AcsI RAATTY 1 cut(s) 263
AcyI GRCGYC 1 cut(s) 552
AfaI GTAC 2 cut(s) 641, 1494
AfiI CCNNNNNNNGG 2 cut(s) 820, 1246
AgsI TTSAA 5 cut(s) 12, 223, 1265, 1335, 1361
AjnI CCWGG 3 cut(s) 915, 1032, 1117
AluBI AGCT 9 cut(s) 75, 193, 327, 385, 453, 490, 541, 974, 1369
AluI AGCT 9 cut(s) 75, 193, 327, 385, 453, 490, 541, 974, 1369
Alw21I GWGCWC 1 cut(s) 976
Alw26I GTCTC 5 cut(s) 209, 582, 1137, 1613, 1645
AlwI GGATC 4 cut(s) 907, 947, 1322, 1335
AlwNI CAGNNNCTG 1 cut(s) 1124
AoxI GGCC 2 cut(s) 1225, 1608
ApeKI GCWGC 5 cut(s) 193, 414, 635, 1007, 1667
ApoI RAATTY 1 cut(s) 263
AseI ATTAAT 1 cut(s) 1512
Asp700I GAANNNNTTC 2 cut(s) 540, 1484
AspLEI GCGC 2 cut(s) 1059, 1066
AsuC2I CCSGG 1 cut(s) 746
AsuHPI GGTGA 5 cut(s) 415, 691, 782, 1123, 1183
AsuII TTCGAA 2 cut(s) 755, 1498
BaeGI GKGCMC 2 cut(s) 660, 1033
BamHI GGATCC 1 cut(s) 1327
BanI GGYRCC 1 cut(s) 1028
BanII GRGCYC 2 cut(s) 87, 976
BarI GAAGNNNNNNTAC 2 cut(s) 1401, 1433
BauI CACGAG 3 cut(s) 101, 114, 1364
Bbv12I GWGCWC 1 cut(s) 976
BbvI GCAGC 5 cut(s) 180, 401, 622, 994, 1654
BccI CCATC 3 cut(s) 385, 819, 929
BcgI CGANNNNNNTGC 2 cut(s) 857, 891
BciT130I CCWGG 3 cut(s) 917, 1034, 1119
BclI TGATCA 1 cut(s) 1372
BcnI CCSGG 1 cut(s) 746
BcoDI GTCTC 5 cut(s) 209, 582, 1137, 1613, 1645
BfaI CTAG 5 cut(s) 126, 197, 524, 624, 1209
BfmI CTRYAG 1 cut(s) 1342
BglI GCCNNNNNGGC 1 cut(s) 1656
BglII AGATCT 1 cut(s) 830
BisI GCNGC 6 cut(s) 6, 194, 415, 636, 1008, 1668
BlsI GCNGC 6 cut(s) 7, 195, 416, 637, 1009, 1669
BmcAI AGTACT 1 cut(s) 1494
Bme1390I CCNGG 4 cut(s) 746, 917, 1034, 1119
BmiI GGNNCC 2 cut(s) 1030, 1329
BmrFI CCNGG 4 cut(s) 746, 917, 1034, 1119
BmsI GCATC 5 cut(s) 293, 667, 1051, 1179, 1547
BplI GAGNNNNNCTC 2 cut(s) 59, 91
BpmI CTGGAG 2 cut(s) 796, 1101
Bpu14I TTCGAA 2 cut(s) 755, 1498
BpuEI CTTGAG 3 cut(s) 568, 752, 1412
BpuMI CCSGG 1 cut(s) 746
BsaBI GATNNNNATC 1 cut(s) 829
BsaHI GRCGYC 1 cut(s) 552
BsaJI CCNNGG 4 cut(s) 814, 1032, 1245, 1531
BsaXI ACNNNNNCTCC 2 cut(s) 820, 850
Bsc4I CCNNNNNNNGG 2 cut(s) 820, 1246
Bse118I RCCGGY 1 cut(s) 1655
Bse1I ACTGG 2 cut(s) 537, 779
Bse3DI GCAATG 2 cut(s) 369, 564
Bse8I GATNNNNATC 1 cut(s) 829
BseBI CCWGG 3 cut(s) 917, 1034, 1119
BseDI CCNNGG 4 cut(s) 814, 1032, 1245, 1531
BseGI GGATG 5 cut(s) 303, 830, 940, 1042, 1291
BseJI GATNNNNATC 1 cut(s) 829
BseLI CCNNNNNNNGG 2 cut(s) 820, 1246
BseMI GCAATG 2 cut(s) 369, 564
BseMII CTCAG 6 cut(s) 108, 152, 225, 228, 337, 1656
BseNI ACTGG 2 cut(s) 537, 779
BseRI GAGGAG 1 cut(s) 873
BseSI GKGCMC 2 cut(s) 660, 1033
BseXI GCAGC 5 cut(s) 180, 401, 622, 994, 1654
BseYI CCCAGC 2 cut(s) 395, 1060
Bsh1236I CGCG 1 cut(s) 1066
Bsh1285I CGRYCG 2 cut(s) 888, 1656
BshFI GGCC 2 cut(s) 1227, 1610
BshNI GGYRCC 1 cut(s) 1028
BsiEI CGRYCG 2 cut(s) 888, 1656
BsiHKAI GWGCWC 1 cut(s) 976
BsiSI CCGG 2 cut(s) 746, 1656
BslI CCNNNNNNNGG 2 cut(s) 820, 1246
BsmAI GTCTC 5 cut(s) 209, 582, 1137, 1613, 1645
BsmI GAATGC 2 cut(s) 617, 1652
BsnI GGCC 2 cut(s) 1227, 1610
Bsp119I TTCGAA 2 cut(s) 755, 1498
Bsp1286I GDGCHC 4 cut(s) 87, 660, 976, 1033
BspACI CCGC 7 cut(s) 5, 179, 417, 749, 907, 969, 1580
BspANI GGCC 2 cut(s) 1227, 1610
BspCNI CTCAG 6 cut(s) 107, 153, 224, 229, 336, 1655
BspFNI CGCG 1 cut(s) 1066
BspHI TCATGA 1 cut(s) 484
BspLI GGNNCC 2 cut(s) 1030, 1329
BspPI GGATC 4 cut(s) 907, 947, 1322, 1335
BspT104I TTCGAA 2 cut(s) 755, 1498
BspT107I GGYRCC 1 cut(s) 1028
BsrDI GCAATG 2 cut(s) 369, 564
BsrFI RCCGGY 1 cut(s) 1655
BsrI ACTGG 2 cut(s) 537, 779
BssAI RCCGGY 1 cut(s) 1655
BssECI CCNNGG 4 cut(s) 814, 1032, 1245, 1531
BssNI GRCGYC 1 cut(s) 552
BssSI CACGAG 3 cut(s) 101, 114, 1364
BssT1I CCWWGG 3 cut(s) 814, 1245, 1531
Bst2BI CACGAG 3 cut(s) 101, 114, 1364
Bst2UI CCWGG 3 cut(s) 917, 1034, 1119
Bst4CI ACNGT 2 cut(s) 672, 1126
Bst6I CTCTTC 2 cut(s) 178, 438
BstACI GRCGYC 1 cut(s) 552
BstAPI GCANNNNNTGC 1 cut(s) 512
BstBI TTCGAA 2 cut(s) 755, 1498
BstDEI CTNAG 7 cut(s) 94, 161, 211, 237, 323, 1542, 1642
BstENI CCTNNNNNAGG 2 cut(s) 818, 1244
BstF5I GGATG 5 cut(s) 303, 830, 940, 1042, 1291
BstFNI CGCG 1 cut(s) 1066
BstHHI GCGC 2 cut(s) 1059, 1066
BstMAI GTCTC 5 cut(s) 209, 582, 1137, 1613, 1645
BstMCI CGRYCG 2 cut(s) 888, 1656
BstMWI GCNNNNNNNGC 5 cut(s) 512, 1016, 1063, 1308, 1656
BstNI CCWGG 3 cut(s) 917, 1034, 1119
BstNSI RCATGY 1 cut(s) 619
BstSCI CCNGG 4 cut(s) 744, 915, 1032, 1117
BstSFI CTRYAG 1 cut(s) 1342
BstSLI GKGCMC 2 cut(s) 660, 1033
BstUI CGCG 1 cut(s) 1066
BstV1I GCAGC 5 cut(s) 180, 401, 622, 994, 1654
BstX2I RGATCY 3 cut(s) 830, 912, 1327
BstYI RGATCY 3 cut(s) 830, 912, 1327
BsuRI GGCC 2 cut(s) 1227, 1610
BtgZI GCGATG 2 cut(s) 139, 1648
BtsCI GGATG 5 cut(s) 303, 830, 940, 1042, 1291
BtsI GCAGTG 1 cut(s) 1110
BtsIMutI CAGTG 3 cut(s) 285, 1110, 1556
CaiI CAGNNNCTG 1 cut(s) 1124
CciI TCATGA 1 cut(s) 484
CfoI GCGC 2 cut(s) 1059, 1066
Cfr10I RCCGGY 1 cut(s) 1655
CseI GACGC 1 cut(s) 541
Csp6I GTAC 2 cut(s) 640, 1493
CviAII CATG 5 cut(s) 485, 616, 1054, 1147, 1195
CviQI GTAC 2 cut(s) 640, 1493
DdeI CTNAG 7 cut(s) 94, 161, 211, 237, 323, 1542, 1642
EaeI YGGCCR 1 cut(s) 1225
Eam1104I CTCTTC 2 cut(s) 178, 438
EarI CTCTTC 2 cut(s) 178, 438
EciI GGCGGA 1 cut(s) 1595
Ecl136II GAGCTC 1 cut(s) 974
Eco130I CCWWGG 3 cut(s) 814, 1245, 1531
Eco24I GRGCYC 2 cut(s) 87, 976
Eco53kI GAGCTC 1 cut(s) 974
EcoICRI GAGCTC 1 cut(s) 974
EcoNI CCTNNNNNAGG 2 cut(s) 818, 1244
EcoRII CCWGG 3 cut(s) 915, 1032, 1117
EcoT14I CCWWGG 3 cut(s) 814, 1245, 1531
EcoT22I ATGCAT 2 cut(s) 617, 682
EcoT38I GRGCYC 2 cut(s) 87, 976
ErhI CCWWGG 3 cut(s) 814, 1245, 1531
FaeI CATG 5 cut(s) 488, 619, 1057, 1150, 1198
FatI CATG 5 cut(s) 484, 615, 1053, 1146, 1194
FauI CCCGC 2 cut(s) 172, 900
FbaI TGATCA 1 cut(s) 1372
FblI GTMKAC 1 cut(s) 432
Fnu4HI GCNGC 6 cut(s) 6, 194, 415, 636, 1008, 1668
FokI GGATG 5 cut(s) 310, 837, 947, 1029, 1298
FriOI GRGCYC 2 cut(s) 87, 976
Fsp4HI GCNGC 6 cut(s) 6, 194, 415, 636, 1008, 1668
FspBI CTAG 5 cut(s) 126, 197, 524, 624, 1209
GlaI GCGC 2 cut(s) 1058, 1065
GluI GCNGC 6 cut(s) 6, 194, 415, 636, 1008, 1668
GsaI CCCAGC 2 cut(s) 399, 1064
GsuI CTGGAG 2 cut(s) 796, 1101
HaeIII GGCC 2 cut(s) 1227, 1610
HapII CCGG 2 cut(s) 746, 1656
HgaI GACGC 1 cut(s) 541
HhaI GCGC 2 cut(s) 1059, 1066
Hin1I GRCGYC 1 cut(s) 552
Hin1II CATG 5 cut(s) 488, 619, 1057, 1150, 1198
Hin6I GCGC 2 cut(s) 1057, 1064
HinP1I GCGC 2 cut(s) 1057, 1064
HincII GTYRAC 1 cut(s) 433
HindII GTYRAC 1 cut(s) 433
HindIII AAGCTT 1 cut(s) 383
HpaII CCGG 2 cut(s) 746, 1656
HphI GGTGA 5 cut(s) 415, 691, 782, 1123, 1183
Hpy166II GTNNAC 3 cut(s) 433, 621, 1549
Hpy188I TCNGA 7 cut(s) 162, 214, 1179, 1448, 1458, 1490, 1645
Hpy8I GTNNAC 3 cut(s) 433, 621, 1549
Hpy99I CGWCG 2 cut(s) 434, 557
HpyAV CCTTC 9 cut(s) 397, 521, 559, 886, 1064, 1341, 1474, 1588, 1621
HpyCH4III ACNGT 2 cut(s) 672, 1126
HpyCH4IV ACGT 3 cut(s) 132, 429, 1183
HpyCH4V TGCA 9 cut(s) 16, 515, 615, 680, 791, 878, 1042, 1295, 1538
HpyF10VI GCNNNNNNNGC 5 cut(s) 512, 1016, 1063, 1308, 1656
HpyF3I CTNAG 7 cut(s) 94, 161, 211, 237, 323, 1542, 1642
HpySE526I ACGT 3 cut(s) 132, 429, 1183
Hsp92I GRCGYC 1 cut(s) 552
Hsp92II CATG 5 cut(s) 488, 619, 1057, 1150, 1198
HspAI GCGC 2 cut(s) 1057, 1064
Ksp22I TGATCA 1 cut(s) 1372
LmnI GCTCC 5 cut(s) 190, 777, 971, 1120, 1582
Lsp1109I GCAGC 5 cut(s) 180, 401, 622, 994, 1654
LweI GCATC 5 cut(s) 293, 667, 1051, 1179, 1547
MaeI CTAG 5 cut(s) 126, 197, 524, 624, 1209
MaeII ACGT 3 cut(s) 132, 429, 1183
MaeIII GTNAC 8 cut(s) 166, 421, 762, 770, 802, 841, 1073, 1189
MboII GAAGA 4 cut(s) 195, 455, 1408, 1665
MflI RGATCY 3 cut(s) 830, 912, 1327
MhlI GDGCHC 4 cut(s) 87, 660, 976, 1033
MluCI AATT 6 cut(s) 245, 263, 569, 651, 1356, 1431
MmeI TCCRAC 1 cut(s) 1179
MnlI CCTC 8 cut(s) 118, 220, 727, 851, 854, 997, 1378, 1570
Mph1103I ATGCAT 2 cut(s) 617, 682
MroXI GAANNNNTTC 2 cut(s) 540, 1484
MseI TTAA 8 cut(s) 30, 50, 227, 546, 572, 1092, 1355, 1512
MslI CAYNNNNRTG 2 cut(s) 1217, 1280
MspI CCGG 2 cut(s) 746, 1656
MspR9I CCNGG 4 cut(s) 746, 917, 1034, 1119
Mva1269I GAATGC 2 cut(s) 617, 1652
MvaI CCWGG 3 cut(s) 917, 1034, 1119
MvnI CGCG 1 cut(s) 1066
MwoI GCNNNNNNNGC 5 cut(s) 512, 1016, 1063, 1308, 1656
NciI CCSGG 1 cut(s) 746
NlaIII CATG 5 cut(s) 488, 619, 1057, 1150, 1198
NlaIV GGNNCC 2 cut(s) 1030, 1329
NmeAIII GCCGAG 2 cut(s) 1203, 1586
NmuCI GTSAC 4 cut(s) 421, 770, 802, 1189
NsiI ATGCAT 2 cut(s) 617, 682
NspI RCATGY 1 cut(s) 619
NspV TTCGAA 2 cut(s) 755, 1498
PagI TCATGA 1 cut(s) 484
PcsI WCGNNNNNNNCGW 1 cut(s) 438
PctI GAATGC 2 cut(s) 617, 1652
PdmI GAANNNNTTC 2 cut(s) 540, 1484
PfoI TCCNGGA 1 cut(s) 1117
PkrI GCNGC 6 cut(s) 7, 195, 416, 637, 1009, 1669
Ple19I CGATCG 1 cut(s) 888
PshBI ATTAAT 1 cut(s) 1512
Psp124BI GAGCTC 1 cut(s) 976
Psp6I CCWGG 3 cut(s) 915, 1032, 1117
PspFI CCCAGC 2 cut(s) 395, 1060
PspGI CCWGG 3 cut(s) 915, 1032, 1117
PspN4I GGNNCC 2 cut(s) 1030, 1329
PstNI CAGNNNCTG 1 cut(s) 1124
PsuI RGATCY 3 cut(s) 830, 912, 1327
PvuI CGATCG 1 cut(s) 888
RsaI GTAC 2 cut(s) 641, 1494
RsaNI GTAC 2 cut(s) 640, 1493
RseI CAYNNNNRTG 2 cut(s) 1217, 1280
SacI GAGCTC 1 cut(s) 976
SalI GTCGAC 1 cut(s) 431
SaqAI TTAA 8 cut(s) 30, 50, 227, 546, 572, 1092, 1355, 1512
SatI GCNGC 6 cut(s) 6, 194, 415, 636, 1008, 1668
ScaI AGTACT 1 cut(s) 1494
ScrFI CCNGG 4 cut(s) 746, 917, 1034, 1119
SduI GDGCHC 4 cut(s) 87, 660, 976, 1033
SfaNI GCATC 5 cut(s) 293, 667, 1051, 1179, 1547
SfcI CTRYAG 1 cut(s) 1342
SfuI TTCGAA 2 cut(s) 755, 1498
SmiMI CAYNNNNRTG 2 cut(s) 1217, 1280
SmlI CTYRAG 3 cut(s) 583, 731, 1391
SmoI CTYRAG 3 cut(s) 583, 731, 1391
Sse9I AATT 6 cut(s) 245, 263, 569, 651, 1356, 1431
SsiI CCGC 7 cut(s) 5, 179, 417, 749, 907, 969, 1580
SspMI CTAG 5 cut(s) 126, 197, 524, 624, 1209
SstI GAGCTC 1 cut(s) 976
StyD4I CCNGG 4 cut(s) 744, 915, 1032, 1117
StyI CCWWGG 3 cut(s) 814, 1245, 1531
TaaI ACNGT 2 cut(s) 672, 1126
TaiI ACGT 3 cut(s) 135, 432, 1186
TaqI TCGA 5 cut(s) 432, 441, 755, 1420, 1498
TasI AATT 6 cut(s) 245, 263, 569, 651, 1356, 1431
TatI WGTACW 1 cut(s) 1492
TauI GCSGC 1 cut(s) 8
Tru1I TTAA 8 cut(s) 30, 50, 227, 546, 572, 1092, 1355, 1512
Tru9I TTAA 8 cut(s) 30, 50, 227, 546, 572, 1092, 1355, 1512
TscAI CASTG 3 cut(s) 285, 1117, 1563
TseFI GTSAC 4 cut(s) 421, 770, 802, 1189
TseI GCWGC 5 cut(s) 193, 414, 635, 1007, 1667
Tsp45I GTSAC 4 cut(s) 421, 770, 802, 1189
TspDTI ATGAA 4 cut(s) 275, 578, 591, 1459
TspGWI ACGGA 1 cut(s) 39
TspRI CASTG 3 cut(s) 285, 1117, 1563
VspI ATTAAT 1 cut(s) 1512
XagI CCTNNNNNAGG 2 cut(s) 818, 1244
XapI RAATTY 1 cut(s) 263
XbaI TCTAGA 2 cut(s) 125, 523
XceI RCATGY 1 cut(s) 619
XmiI GTMKAC 1 cut(s) 432
XmnI GAANNNNTTC 2 cut(s) 540, 1484
XspI CTAG 5 cut(s) 126, 197, 524, 624, 1209
ZrmI AGTACT 1 cut(s) 1494
Zsp2I ATGCAT 2 cut(s) 617, 682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.