AT5G14060

Aspartokinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
4535367 .. 4539323
3957 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14060.2

Sequence Viewer

Length: 1635 bp
ATGGCTTCATTGCAGTTGTACGGAGTTAAAACTCCAGGGCTTGCTTTAAGTTCAAAGAGGCTTGAGTTTGCTTCAAAGGGGGCATGTTTTTCAGTTACGTTGCCCTCAAGTAGTGCTGTCTTTAGAGACGTAGAGCATTCTTGTAGGAATATAGGTTTGAGAGTTAGTTGTGAAGCTCTAAGAGTCGATTTGCTTCAAAGAAAAGAGCCTGAGACGTGCGATTCAAGCGGAACTGGCAAAGAGTTGACATGTGTAATGAAATTTGGCGGTTCATCAGTGGAATCAGCAGAGAGGATGAAAGAAGTTGCCAATCTTATACTCAGCTTTCCAGATGAGAGGCCCGTCATTGTGCTATCAGCAATGGGAAAGACGACTAATAAGCTTTTGAAGGCTGGAGAGAAGGCTGTTACTTGCGGTGTCACTAACGTAGAAAGTATTGAAGAATTGAGCTTTATAAAGGAACTCCATTTAAGAACTGCTCATGAGCTTGGAGTGGAAACAACGGTTATTGAAAAACACCTAGAAGGACTACACCAGCTTCTCAAAGGCATATCAATGATGAAAGAGCTAACCTTACGCACAAGGGACTACTTGGTTTCATTTGGAGAGTGCATGTCCACAAGGCTTTTCTCTGCGTATCTCAATAAAATTGGCCACAAAGCGCGTCAATATGATGCATTTGAGATCGGATTTATCACCACAGACGACTTTACTAATGCTGATATACTTGAAGCAACATACCCTGCCGTCTCAAAAACACTTGTTGGCGACTGGAGCAAGGAAAATGCAGTCCCTGTTGTTACTGGCTACCTCGGAAAGGGATGGAGGTCTTGTGCTATCACTACGCTGGGTAGGGGTGGCAGTGATTTGACAGCTACAACGATTGGGAAAGCGCTAGGACTGCGGGAAATTCAGGTTTGGAAAGATGTGGATGGAGTTTTGACTTGTGATCCTAACATATATCCTGGAGCTCAATCTGTTCCGTACTTAACGTTCGATGAGGCAGCTGAGCTTGCTTACTTTGGTGCCCAGGTGTTGCATCCACTGTCTATGAGGCCAGCAAGAGATGGCGACATTCCTGTGAGGGTTAAGAACTCGTACAACCCCACTGCTCCAGGAACTGTCATCACCAGATCAAGAGACATGAGTAAGGCTGTGCTAACCAGCATTGTTCTGAAACGTAATGTGACCATGTTGGACATAGCAAGCACCCGTATGCTTGGCCAATATGGTTTCCTTGCCAAGGTGTTTACCACATTTGAAGATTTAGGTATATCGGTTGATGTTGTGGCAACAAGTGAAGTTAGTATATCATTGACATTGGATCCAGCAAAGCTCTGGGGTAGAGAGTTAATTCAGCGAGTAAATGAACTGGATAATTTGGTGGAAGAGCTAGAGAAGATTGCTGTTGTGAAACTACTTCAACGCAGATCAATCATCTCTCTCATAGGAAATGTTCAGAAATCCTCACTCATATTAGAGAAGGTGTTCCAAGTATTTAGAAGCAATGGAGTGAATGTGCAGATGATCTCGCAGGGTGCATCTAAGGTAAACATCTCATTGATAGTGAATGATGAAGAGGCAGAGCAATGTGTGAGGGCTCTCCACTCCGCCTTCTTTGAGACCGATCCTTAG

Protein Analysis

544

Amino Acids

59.6

Weight (kDa)

6.31

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 83 - 365 4.8e-48 Amino acid kinase family
ACT_9 PF22468 404 - 443 1e-05 ACT domain
ACT_9 PF22468 480 - 539 8.4e-16 ACT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 455
AccB1I GGYRCC 1 cut(s) 1025
AccII CGCG 1 cut(s) 664
AciI CCGC 5 cut(s) 228, 267, 414, 904, 1611
AclI AACGTT 1 cut(s) 992
AclWI GGATC 4 cut(s) 944, 1319, 1332, 1622
AcoI YGGCCR 2 cut(s) 652, 1222
AcsI RAATTY 2 cut(s) 260, 909
AfaI GTAC 3 cut(s) 20, 986, 1100
AfeI AGCGCT 1 cut(s) 894
AfiI CCNNNNNNNGG 2 cut(s) 817, 1243
AflIII ACRYGT 1 cut(s) 248
AjiI CACGTC 1 cut(s) 216
AjnI CCWGG 4 cut(s) 34, 964, 1029, 1114
Alw21I GWGCWC 1 cut(s) 973
Alw26I GTCTC 5 cut(s) 120, 206, 754, 1134, 1616
AlwI GGATC 4 cut(s) 944, 1319, 1332, 1622
AlwNI CAGNNNCTG 2 cut(s) 794, 1121
Aor51HI AGCGCT 1 cut(s) 894
AoxI GGCC 4 cut(s) 338, 652, 1055, 1222
ApeKI GCWGC 1 cut(s) 1004
ApoI RAATTY 2 cut(s) 260, 909
Asp700I GAANNNNTTC 1 cut(s) 1487
AspLEI GCGC 2 cut(s) 664, 895
AspS9I GGNCC 1 cut(s) 339
AsuHPI GGTGA 2 cut(s) 688, 1120
BaeGI GKGCMC 1 cut(s) 1030
BalI TGGCCA 2 cut(s) 654, 1224
BamHI GGATCC 1 cut(s) 1324
BanI GGYRCC 1 cut(s) 1025
BanII GRGCYC 2 cut(s) 973, 1603
Bbv12I GWGCWC 1 cut(s) 973
BbvI GCAGC 1 cut(s) 1016
BccI CCATC 3 cut(s) 816, 926, 1061
BceAI ACGGC 1 cut(s) 731
BciT130I CCWGG 4 cut(s) 36, 966, 1031, 1116
BcoDI GTCTC 5 cut(s) 120, 206, 754, 1134, 1616
BfaI CTAG 3 cut(s) 521, 896, 1394
BfoI RGCGCY 1 cut(s) 896
BisI GCNGC 1 cut(s) 1005
BlpI GCTNAGC 1 cut(s) 1008
BlsI GCNGC 1 cut(s) 1006
Bme1390I CCNGG 4 cut(s) 36, 966, 1031, 1116
BmgBI CACGTC 1 cut(s) 216
BmgT120I GGNCC 1 cut(s) 339
BmiI GGNNCC 2 cut(s) 1027, 1326
BmrFI CCNGG 4 cut(s) 36, 966, 1031, 1116
BmsI GCATC 3 cut(s) 664, 1048, 1550
BpmI CTGGAG 5 cut(s) 18, 414, 793, 987, 1098
Bpu1102I GCTNAGC 1 cut(s) 1008
BpuEI CTTGAG 2 cut(s) 83, 91
BsaI GGTCTC 1 cut(s) 1616
BsaJI CCNNGG 4 cut(s) 35, 811, 1029, 1242
BsaXI ACNNNNNCTCC 4 cut(s) 817, 847, 1503, 1533
Bsc4I CCNNNNNNNGG 2 cut(s) 817, 1243
Bse1I ACTGG 4 cut(s) 238, 776, 808, 1377
Bse3DI GCAATG 4 cut(s) 8, 366, 1513, 1595
BseBI CCWGG 4 cut(s) 36, 966, 1031, 1116
BseDI CCNNGG 4 cut(s) 35, 811, 1029, 1242
BseGI GGATG 4 cut(s) 300, 827, 937, 1039
BseLI CCNNNNNNNGG 2 cut(s) 817, 1243
BseMI GCAATG 4 cut(s) 8, 366, 1513, 1595
BseMII CTCAG 3 cut(s) 201, 334, 999
BseNI ACTGG 4 cut(s) 238, 776, 808, 1377
BseSI GKGCMC 1 cut(s) 1030
BseXI GCAGC 1 cut(s) 1016
BseYI CCCAGC 1 cut(s) 847
BsgI GTGCAG 1 cut(s) 1541
Bsh1236I CGCG 1 cut(s) 664
BshFI GGCC 4 cut(s) 340, 654, 1057, 1224
BshNI GGYRCC 1 cut(s) 1025
BsiHKAI GWGCWC 1 cut(s) 973
BslFI GGGAC 2 cut(s) 599, 776
BslI CCNNNNNNNGG 2 cut(s) 817, 1243
BsmAI GTCTC 5 cut(s) 120, 206, 754, 1134, 1616
BsmBI CGTCTC 3 cut(s) 120, 206, 754
BsmFI GGGAC 2 cut(s) 599, 776
BsmI GAATGC 1 cut(s) 136
BsnI GGCC 4 cut(s) 340, 654, 1057, 1224
Bso31I GGTCTC 1 cut(s) 1616
Bsp1286I GDGCHC 3 cut(s) 973, 1030, 1603
Bsp143I GATC 7 cut(s) 684, 949, 1133, 1324, 1430, 1527, 1627
Bsp1720I GCTNAGC 1 cut(s) 1008
BspACI CCGC 5 cut(s) 228, 267, 414, 904, 1611
BspANI GGCC 4 cut(s) 340, 654, 1057, 1224
BspCNI CTCAG 3 cut(s) 202, 333, 1000
BspFNI CGCG 1 cut(s) 664
BspHI TCATGA 1 cut(s) 481
BspLI GGNNCC 2 cut(s) 1027, 1326
BspPI GGATC 4 cut(s) 944, 1319, 1332, 1622
BspQI GCTCTTC 1 cut(s) 1383
BspT107I GGYRCC 1 cut(s) 1025
BspTNI GGTCTC 1 cut(s) 1616
BsrDI GCAATG 4 cut(s) 8, 366, 1513, 1595
BsrI ACTGG 4 cut(s) 238, 776, 808, 1377
BssECI CCNNGG 4 cut(s) 35, 811, 1029, 1242
BssMI GATC 7 cut(s) 684, 949, 1133, 1324, 1430, 1527, 1627
BssT1I CCWWGG 1 cut(s) 1242
Bst2UI CCWGG 4 cut(s) 36, 966, 1031, 1116
Bst4CI ACNGT 3 cut(s) 505, 1047, 1123
Bst6I CTCTTC 2 cut(s) 1383, 1572
BstC8I GCNNGC 4 cut(s) 42, 1014, 1059, 1207
BstDEI CTNAG 6 cut(s) 179, 210, 320, 1008, 1545, 1632
BstENI CCTNNNNNAGG 2 cut(s) 815, 1241
BstF5I GGATG 4 cut(s) 300, 827, 937, 1039
BstFNI CGCG 1 cut(s) 664
BstH2I RGCGCY 1 cut(s) 896
BstHHI GCGC 2 cut(s) 664, 895
BstKTI GATC 7 cut(s) 687, 952, 1136, 1327, 1433, 1530, 1630
BstMAI GTCTC 5 cut(s) 120, 206, 754, 1134, 1616
BstMBI GATC 7 cut(s) 684, 949, 1133, 1324, 1430, 1527, 1627
BstMWI GCNNNNNNNGC 5 cut(s) 225, 234, 774, 901, 1013
BstNI CCWGG 4 cut(s) 36, 966, 1031, 1116
BstNSI RCATGY 3 cut(s) 87, 252, 616
BstSCI CCNGG 4 cut(s) 34, 964, 1029, 1114
BstSLI GKGCMC 1 cut(s) 1030
BstUI CGCG 1 cut(s) 664
BstV1I GCAGC 1 cut(s) 1016
BstX2I RGATCY 1 cut(s) 1324
BstYI RGATCY 1 cut(s) 1324
BsuRI GGCC 4 cut(s) 340, 654, 1057, 1224
BtrI CACGTC 1 cut(s) 216
BtsCI GGATG 4 cut(s) 300, 827, 937, 1039
BtsI GCAGTG 2 cut(s) 868, 1107
BtsIMutI CAGTG 4 cut(s) 282, 868, 1043, 1107
Cac8I GCNNGC 4 cut(s) 42, 1014, 1059, 1207
CaiI CAGNNNCTG 2 cut(s) 794, 1121
CciI TCATGA 1 cut(s) 481
CfoI GCGC 2 cut(s) 664, 895
Cfr13I GGNCC 1 cut(s) 339
CseI GACGC 1 cut(s) 653
Csp6I GTAC 3 cut(s) 19, 985, 1099
CviAII CATG 6 cut(s) 84, 249, 482, 613, 1144, 1192
CviQI GTAC 3 cut(s) 19, 985, 1099
DdeI CTNAG 6 cut(s) 179, 210, 320, 1008, 1545, 1632
DpnI GATC 7 cut(s) 686, 951, 1135, 1326, 1432, 1529, 1629
DpnII GATC 7 cut(s) 684, 949, 1133, 1324, 1430, 1527, 1627
EaeI YGGCCR 2 cut(s) 652, 1222
Eam1104I CTCTTC 2 cut(s) 1383, 1572
EarI CTCTTC 2 cut(s) 1383, 1572
EciI GGCGGA 1 cut(s) 1600
Ecl136II GAGCTC 1 cut(s) 971
Eco130I CCWWGG 1 cut(s) 1242
Eco24I GRGCYC 2 cut(s) 973, 1603
Eco31I GGTCTC 1 cut(s) 1616
Eco47III AGCGCT 1 cut(s) 894
Eco53kI GAGCTC 1 cut(s) 971
EcoICRI GAGCTC 1 cut(s) 971
EcoNI CCTNNNNNAGG 2 cut(s) 815, 1241
EcoRII CCWGG 4 cut(s) 34, 964, 1029, 1114
EcoT14I CCWWGG 1 cut(s) 1242
EcoT22I ATGCAT 1 cut(s) 679
EcoT38I GRGCYC 2 cut(s) 973, 1603
ErhI CCWWGG 1 cut(s) 1242
Esp3I CGTCTC 3 cut(s) 120, 206, 754
FaeI CATG 6 cut(s) 87, 252, 485, 616, 1147, 1195
FaqI GGGAC 2 cut(s) 599, 776
FatI CATG 6 cut(s) 83, 248, 481, 612, 1143, 1191
FauI CCCGC 1 cut(s) 897
Fnu4HI GCNGC 1 cut(s) 1005
FokI GGATG 4 cut(s) 307, 834, 944, 1026
FriOI GRGCYC 2 cut(s) 973, 1603
Fsp4HI GCNGC 1 cut(s) 1005
FspBI CTAG 3 cut(s) 521, 896, 1394
GlaI GCGC 2 cut(s) 663, 894
GluI GCNGC 1 cut(s) 1005
GsaI CCCAGC 1 cut(s) 851
GsuI CTGGAG 5 cut(s) 18, 414, 793, 987, 1098
HaeII RGCGCY 1 cut(s) 896
HaeIII GGCC 4 cut(s) 340, 654, 1057, 1224
HgaI GACGC 1 cut(s) 653
HhaI GCGC 2 cut(s) 664, 895
Hin1II CATG 6 cut(s) 87, 252, 485, 616, 1147, 1195
Hin6I GCGC 2 cut(s) 662, 893
HinP1I GCGC 2 cut(s) 662, 893
HincII GTYRAC 1 cut(s) 246
HindII GTYRAC 1 cut(s) 246
HindIII AAGCTT 1 cut(s) 380
HinfI GANTC 3 cut(s) 183, 221, 281
HphI GGTGA 2 cut(s) 688, 1120
Hpy166II GTNNAC 4 cut(s) 246, 618, 1251, 1552
Hpy188I TCNGA 4 cut(s) 689, 815, 1176, 1461
Hpy188III TCNNGA 3 cut(s) 329, 482, 1137
Hpy8I GTNNAC 4 cut(s) 246, 618, 1251, 1552
HpyAV CCTTC 5 cut(s) 382, 394, 518, 1477, 1624
HpyCH4III ACNGT 3 cut(s) 505, 1047, 1123
HpyCH4IV ACGT 6 cut(s) 98, 129, 215, 426, 992, 1180
HpyCH4V TGCA 7 cut(s) 13, 612, 677, 788, 1039, 1522, 1541
HpyF10VI GCNNNNNNNGC 5 cut(s) 225, 234, 774, 901, 1013
HpyF3I CTNAG 6 cut(s) 179, 210, 320, 1008, 1545, 1632
HpySE526I ACGT 6 cut(s) 98, 129, 215, 426, 992, 1180
Hsp92II CATG 6 cut(s) 87, 252, 485, 616, 1147, 1195
HspAI GCGC 2 cut(s) 662, 893
Kzo9I GATC 7 cut(s) 684, 949, 1133, 1324, 1430, 1527, 1627
LguI GCTCTTC 1 cut(s) 1383
LmnI GCTCC 3 cut(s) 774, 968, 1117
Lsp1109I GCAGC 1 cut(s) 1016
LweI GCATC 3 cut(s) 664, 1048, 1550
MaeI CTAG 3 cut(s) 521, 896, 1394
MaeII ACGT 6 cut(s) 98, 129, 215, 426, 992, 1180
MaeIII GTNAC 5 cut(s) 94, 406, 418, 799, 1186
MalI GATC 7 cut(s) 686, 951, 1135, 1326, 1432, 1529, 1629
MboI GATC 7 cut(s) 684, 949, 1133, 1324, 1430, 1527, 1627
MboII GAAGA 5 cut(s) 452, 1274, 1400, 1411, 1589
MflI RGATCY 1 cut(s) 1324
MhlI GDGCHC 3 cut(s) 973, 1030, 1603
MlsI TGGCCA 2 cut(s) 654, 1224
MluCI AATT 6 cut(s) 260, 443, 648, 909, 1353, 1378
MluNI TGGCCA 2 cut(s) 654, 1224
MlyI GAGTC 1 cut(s) 192
MmeI TCCRAC 1 cut(s) 1176
Mox20I TGGCCA 2 cut(s) 654, 1224
Mph1103I ATGCAT 1 cut(s) 679
MroXI GAANNNNTTC 1 cut(s) 1487
MscI TGGCCA 2 cut(s) 654, 1224
MseI TTAA 6 cut(s) 27, 47, 470, 989, 1089, 1352
MslI CAYNNNNRTG 3 cut(s) 554, 1079, 1214
Msp20I TGGCCA 2 cut(s) 654, 1224
MspA1I CMGCKG 1 cut(s) 1007
MspR9I CCNGG 4 cut(s) 36, 966, 1031, 1116
Mva1269I GAATGC 1 cut(s) 136
MvaI CCWGG 4 cut(s) 36, 966, 1031, 1116
MvnI CGCG 1 cut(s) 664
MwoI GCNNNNNNNGC 5 cut(s) 225, 234, 774, 901, 1013
NdeII GATC 7 cut(s) 684, 949, 1133, 1324, 1430, 1527, 1627
NlaIII CATG 6 cut(s) 87, 252, 485, 616, 1147, 1195
NlaIV GGNNCC 2 cut(s) 1027, 1326
NmuCI GTSAC 2 cut(s) 418, 1186
NsiI ATGCAT 1 cut(s) 679
NspI RCATGY 3 cut(s) 87, 252, 616
PagI TCATGA 1 cut(s) 481
PciI ACATGT 1 cut(s) 248
PciSI GCTCTTC 1 cut(s) 1383
PctI GAATGC 1 cut(s) 136
PdmI GAANNNNTTC 1 cut(s) 1487
PfeI GAWTC 2 cut(s) 221, 281
PfoI TCCNGGA 2 cut(s) 964, 1114
PkrI GCNGC 1 cut(s) 1006
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
PscI ACATGT 1 cut(s) 248
PsiI TTATAA 1 cut(s) 455
Psp124BI GAGCTC 1 cut(s) 973
Psp1406I AACGTT 1 cut(s) 992
Psp6I CCWGG 4 cut(s) 34, 964, 1029, 1114
PspFI CCCAGC 1 cut(s) 847
PspGI CCWGG 4 cut(s) 34, 964, 1029, 1114
PspN4I GGNNCC 2 cut(s) 1027, 1326
PspPI GGNCC 1 cut(s) 339
PsrI GAACNNNNNNTAC 2 cut(s) 977, 1009
PstNI CAGNNNCTG 2 cut(s) 794, 1121
PsuI RGATCY 1 cut(s) 1324
PvuII CAGCTG 1 cut(s) 1007
RsaI GTAC 3 cut(s) 20, 986, 1100
RsaNI GTAC 3 cut(s) 19, 985, 1099
RseI CAYNNNNRTG 3 cut(s) 554, 1079, 1214
SacI GAGCTC 1 cut(s) 973
SapI GCTCTTC 1 cut(s) 1383
SaqAI TTAA 6 cut(s) 27, 47, 470, 989, 1089, 1352
SatI GCNGC 1 cut(s) 1005
Sau3AI GATC 7 cut(s) 684, 949, 1133, 1324, 1430, 1527, 1627
Sau96I GGNCC 1 cut(s) 339
SchI GAGTC 1 cut(s) 192
ScrFI CCNGG 4 cut(s) 36, 966, 1031, 1116
SduI GDGCHC 3 cut(s) 973, 1030, 1603
SfaNI GCATC 3 cut(s) 664, 1048, 1550
SmiMI CAYNNNNRTG 3 cut(s) 554, 1079, 1214
SmlI CTYRAG 2 cut(s) 62, 106
SmoI CTYRAG 2 cut(s) 62, 106
Sse9I AATT 6 cut(s) 260, 443, 648, 909, 1353, 1378
SsiI CCGC 5 cut(s) 228, 267, 414, 904, 1611
SspMI CTAG 3 cut(s) 521, 896, 1394
SstI GAGCTC 1 cut(s) 973
StyD4I CCNGG 4 cut(s) 34, 964, 1029, 1114
StyI CCWWGG 1 cut(s) 1242
TaaI ACNGT 3 cut(s) 505, 1047, 1123
TaiI ACGT 6 cut(s) 101, 132, 218, 429, 995, 1183
TaqI TCGA 2 cut(s) 186, 996
TasI AATT 6 cut(s) 260, 443, 648, 909, 1353, 1378
TfiI GAWTC 2 cut(s) 221, 281
Tru1I TTAA 6 cut(s) 27, 47, 470, 989, 1089, 1352
Tru9I TTAA 6 cut(s) 27, 47, 470, 989, 1089, 1352
TscAI CASTG 4 cut(s) 282, 868, 1050, 1114
TseFI GTSAC 2 cut(s) 418, 1186
TseI GCWGC 1 cut(s) 1004
Tsp45I GTSAC 2 cut(s) 418, 1186
TspDTI ATGAA 7 cut(s) 261, 272, 311, 575, 588, 1383, 1590
TspGWI ACGGA 2 cut(s) 36, 972
TspRI CASTG 4 cut(s) 282, 868, 1050, 1114
XagI CCTNNNNNAGG 2 cut(s) 815, 1241
XapI RAATTY 2 cut(s) 260, 909
XceI RCATGY 3 cut(s) 87, 252, 616
XcmI CCANNNNNNNNNTGG 1 cut(s) 1335
XmnI GAANNNNTTC 1 cut(s) 1487
XspI CTAG 3 cut(s) 521, 896, 1394
Zsp2I ATGCAT 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.