MD09G1003700.v1.1

Aspartokinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
330615 .. 334768
4154 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1003700.v1.1.491

Sequence Viewer

Length: 1701 bp
ATGGCGACCGCCTTGCATTTTTCCGGAGTTAAAACTCTGTGCCCATCATCCTCAGAAAGATCTTTGCATTTCAATCAACCACTTTTGTCACAAAGTCTTGGTTTCGCAACTTGTGTCGCTTCCAGCAATGGATTCTATGCAAGTGCGAAAGACTTTTCTTGTACGAGCAGGGTTTTGAGAGTCAGTTGCGAGGGAGGGATTGCAGATGTTCTTGAAAAGAAACGGAATGACAATCAAAGCCTTGGCGAGAATGAGAAACAATTGACGTGCGTTATGAAGTTTGGTGGCTCCTCGGTGGCTTCTGCAGAGAGAATGAGGGAGGTTGCTGATCTTATACTCAGCTTCCCACAAGAGAGGCCTGTCGTTGTTCTTTCTGCCATGGGAAAGACAACTAACAAACTCCTACTGGCAGGAGAAAAGGCCGTCACCTGCGGTGTTACCAATGTATCTATGATTGATGAGTTGAGCTTCATAAAAGAATTACATCTCAGGACCGTGGAAGAACTTGGAGTGGACAGCTCCATCATTTCATCACACCTCCAAGAACTGGAACAACTTCTGAAGGGAATTGCTATGATGAAAGAGTTGACTTTACGAACCAAAGACTATCTGGTTTCATTTGGGGAATGCATGTCCACACGGCTTTTTGTTGCCTATCTGAATAAGATTGGCGTTAAAGCCCGCCAATATGATGCCTTTGAAATTGGGTTTATAACCACAGATGACTTCACAAATGCGGACATTTTGGAGGCAACTTATCCAGCTGTCGCAAAGAGGTTACATGGTGATTGGATATGTGATCCTGCTATTCCAATTGTTACTGGTTTCCTTGGAAAGGGATGGAGATCATGTGCTGTGACTACACTGGGTAGAGGTGGTAGTGATTTGACAGCTACAACCATTGGTAAAGCATTGGGGTTACGAGAAATTCAGGTGTGGAAGGATGTTGATGGCGTTTTGACATGTGATCCTAACATATGTCAGCATGCACAACCTGTACCTTATTTGACATTTGAAGAGGCTGCCGAACTTGCATATTTTGGTGCTCAGGTCTTGCATCCACAGTCCATGAGACCAGCCAGAGAGGCTGATATTCCAGTGAGGGTTAAAAATTCATACAACCCTAATGCTCCTGGTACTGTTATCACCCATGCAAGAGATATGAGCAAGGCTGTATTAACCAGCATCGTTTTGAAAAGGAATGTGACTATGTTGGATATTGTTAGCACTCGCATGCTGGGTCAATATGGATTTCTTGCTAAGGTATTTACAACTTTCGAAGATTTGGGCATATCAGTTGATGTTGTTGCTACCAGTGAAGTTAGTATTTCCTTGACACTGGATCCCTCAAAGCTTTGGAGCAGAGAGCTTATTCAGCAGGAACTTGACCATGTCGCGGAAGAACTTGAGAAAATTGCTGTTGTCAATCTTCTTCAGCACAGATCTATTATATCTCTCATTGGAAATGTGCAGAGGTCATCACTGATACTAGAGAGGGCATTTCAGGTTCTTCGAACCATTGGAGTCAATGTTCAAATGATCTCTCAGGGTGCATCCAAGGTTAATATCTCTTTGGTTGTAAATGACGATGAAGCAGAGCAGTGCGTTAGGGCTCTCCACCAGGCTTTCTTTGGAAACGATCTCTTTGAAGTAGAGTGTGGATCGGAGAATGGTTCGGTCTTAGTATCAGAGCAACATTGA

Protein Analysis

567

Amino Acids

61.92

Weight (kDa)

5.58

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 89 - 371 7.2e-47 Amino acid kinase family
ACT_9 PF22468 407 - 450 1.9e-06 ACT domain
ACT_9 PF22468 484 - 543 5.4e-16 ACT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 713
AarI CACCTGC 1 cut(s) 437
Acc36I ACCTGC 1 cut(s) 437
AccB7I CCANNNNNTGG 1 cut(s) 547
AccII CGCG 1 cut(s) 1397
AccIII TCCGGA 1 cut(s) 23
AciI CCGC 5 cut(s) 9, 432, 682, 737, 1397
AclWI GGATC 5 cut(s) 794, 962, 1337, 1350, 1669
AcsI RAATTY 2 cut(s) 927, 1111
AcuI CTGAAG 2 cut(s) 581, 1418
AfaI GTAC 3 cut(s) 163, 999, 1138
AfiI CCNNNNNNNGG 3 cut(s) 547, 835, 1396
AflIII ACRYGT 1 cut(s) 962
AgsI TTSAA 7 cut(s) 73, 215, 701, 1016, 1195, 1535, 1649
AjiI CACGTC 1 cut(s) 267
AjnI CCWGG 2 cut(s) 1132, 1620
AloI GAACNNNNNNTCC 2 cut(s) 1515, 1547
AluBI AGCT 7 cut(s) 342, 468, 519, 764, 893, 1354, 1369
AluI AGCT 7 cut(s) 342, 468, 519, 764, 893, 1354, 1369
Alw21I GWGCWC 1 cut(s) 1048
Alw26I GTCTC 1 cut(s) 1066
AlwI GGATC 5 cut(s) 794, 962, 1337, 1350, 1669
Aor13HI TCCGGA 1 cut(s) 23
AoxI GGCC 2 cut(s) 356, 420
ApeKI GCWGC 1 cut(s) 1022
ApoI RAATTY 2 cut(s) 927, 1111
Asp700I GAANNNNTTC 1 cut(s) 555
AspS9I GGNCC 1 cut(s) 492
AsuHPI GGTGA 3 cut(s) 418, 797, 1138
AsuII TTCGAA 2 cut(s) 1278, 1513
AvaII GGWCC 1 cut(s) 492
BaeGI GKGCMC 1 cut(s) 44
BaeI ACNNNNGTAYC 2 cut(s) 429, 462
BamHI GGATCC 1 cut(s) 1342
BanII GRGCYC 1 cut(s) 1615
Bbv12I GWGCWC 1 cut(s) 1048
BbvI GCAGC 1 cut(s) 1009
BccI CCATC 4 cut(s) 52, 530, 834, 944
BceAI ACGGC 2 cut(s) 407, 656
BcgI CGANNNNNNTGC 1 cut(s) 29
BciT130I CCWGG 2 cut(s) 1134, 1622
BcoDI GTCTC 1 cut(s) 1066
BfaI CTAG 1 cut(s) 1490
BfmI CTRYAG 1 cut(s) 303
BfuAI ACCTGC 1 cut(s) 437
BglI GCCNNNNNGGC 1 cut(s) 1085
BglII AGATCT 2 cut(s) 59, 1442
BisI GCNGC 1 cut(s) 1023
BlsI GCNGC 1 cut(s) 1024
Bme1390I CCNGG 2 cut(s) 1134, 1622
Bme18I GGWCC 1 cut(s) 492
BmgBI CACGTC 1 cut(s) 267
BmgT120I GGNCC 1 cut(s) 492
BmiI GGNNCC 2 cut(s) 289, 1344
BmrFI CCNGG 2 cut(s) 1134, 1622
BmrI ACTGGG 1 cut(s) 875
BmsI GCATC 4 cut(s) 682, 1066, 1194, 1562
BmuI ACTGGG 1 cut(s) 875
Bpu10I CCTNAGC 2 cut(s) 1047, 1260
Bpu14I TTCGAA 2 cut(s) 1278, 1513
BpuEI CTTGAG 1 cut(s) 1427
BsaBI GATNNNNATC 1 cut(s) 844
BsaI GGTCTC 1 cut(s) 1066
BsaJI CCNNGG 6 cut(s) 241, 291, 378, 495, 829, 1557
BsaWI WCCGGW 1 cut(s) 23
BsaXI ACNNNNNCTCC 4 cut(s) 835, 865, 1515, 1545
Bsc4I CCNNNNNNNGG 3 cut(s) 547, 835, 1396
Bse1I ACTGG 7 cut(s) 411, 552, 826, 870, 1097, 1314, 1344
Bse3DI GCAATG 1 cut(s) 133
Bse8I GATNNNNATC 1 cut(s) 844
BseAI TCCGGA 1 cut(s) 23
BseBI CCWGG 2 cut(s) 1134, 1622
BseDI CCNNGG 6 cut(s) 241, 291, 378, 495, 829, 1557
BseGI GGATG 5 cut(s) 47, 845, 949, 1057, 1553
BseJI GATNNNNATC 1 cut(s) 844
BseLI CCNNNNNNNGG 3 cut(s) 547, 835, 1396
BseMI GCAATG 1 cut(s) 133
BseMII CTCAG 5 cut(s) 66, 352, 502, 1061, 1559
BseNI ACTGG 7 cut(s) 411, 552, 826, 870, 1097, 1314, 1344
BseRI GAGGAG 1 cut(s) 280
BseSI GKGCMC 1 cut(s) 44
BseXI GCAGC 1 cut(s) 1009
BseYI CCCAGC 1 cut(s) 1237
BsgI GTGCAG 1 cut(s) 1490
Bsh1236I CGCG 1 cut(s) 1397
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 2 cut(s) 358, 422
BsiEI CGRYCG 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 1048
BsiSI CCGG 1 cut(s) 24
BslI CCNNNNNNNGG 3 cut(s) 547, 835, 1396
BsmAI GTCTC 1 cut(s) 1066
BsmI GAATGC 1 cut(s) 632
BsnI GGCC 2 cut(s) 358, 422
Bso31I GGTCTC 1 cut(s) 1066
Bsp119I TTCGAA 2 cut(s) 1278, 1513
Bsp1286I GDGCHC 3 cut(s) 44, 1048, 1615
Bsp13I TCCGGA 1 cut(s) 23
Bsp19I CCATGG 1 cut(s) 378
BspACI CCGC 5 cut(s) 9, 432, 682, 737, 1397
BspANI GGCC 2 cut(s) 358, 422
BspCNI CTCAG 5 cut(s) 65, 351, 501, 1060, 1558
BspEI TCCGGA 1 cut(s) 23
BspFNI CGCG 1 cut(s) 1397
BspLI GGNNCC 2 cut(s) 289, 1344
BspMAI CTGCAG 1 cut(s) 307
BspMI ACCTGC 1 cut(s) 437
BspPI GGATC 5 cut(s) 794, 962, 1337, 1350, 1669
BspT104I TTCGAA 2 cut(s) 1278, 1513
BspTNI GGTCTC 1 cut(s) 1066
BsrDI GCAATG 1 cut(s) 133
BsrI ACTGG 7 cut(s) 411, 552, 826, 870, 1097, 1314, 1344
BssECI CCNNGG 6 cut(s) 241, 291, 378, 495, 829, 1557
BssT1I CCWWGG 4 cut(s) 241, 378, 829, 1557
Bst2UI CCWGG 2 cut(s) 1134, 1622
Bst4CI ACNGT 3 cut(s) 496, 1065, 1141
Bst6I CTCTTC 1 cut(s) 1011
BstBI TTCGAA 2 cut(s) 1278, 1513
BstC8I GCNNGC 3 cut(s) 682, 987, 1235
BstDEI CTNAG 7 cut(s) 52, 338, 488, 1047, 1260, 1545, 1681
BstDSI CCRYGG 2 cut(s) 378, 495
BstENI CCTNNNNNAGG 1 cut(s) 833
BstF5I GGATG 5 cut(s) 47, 845, 949, 1057, 1553
BstFNI CGCG 1 cut(s) 1397
BstMAI GTCTC 1 cut(s) 1066
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 3 cut(s) 1031, 1085, 1375
BstNI CCWGG 2 cut(s) 1134, 1622
BstNSI RCATGY 4 cut(s) 634, 966, 989, 1237
BstSCI CCNGG 2 cut(s) 1132, 1620
BstSFI CTRYAG 1 cut(s) 303
BstSLI GKGCMC 1 cut(s) 44
BstUI CGCG 1 cut(s) 1397
BstV1I GCAGC 1 cut(s) 1009
BstX2I RGATCY 3 cut(s) 59, 1342, 1442
BstYI RGATCY 3 cut(s) 59, 1342, 1442
BsuRI GGCC 2 cut(s) 358, 422
BtgI CCRYGG 2 cut(s) 378, 495
BtrI CACGTC 1 cut(s) 267
BtsCI GGATG 5 cut(s) 47, 845, 949, 1057, 1553
BtsI GCAGTG 1 cut(s) 1607
BtsIMutI CAGTG 6 cut(s) 863, 1104, 1321, 1337, 1481, 1607
BveI ACCTGC 1 cut(s) 437
Cac8I GCNNGC 3 cut(s) 682, 987, 1235
Cfr13I GGNCC 1 cut(s) 492
Csp6I GTAC 3 cut(s) 162, 998, 1137
CviQI GTAC 3 cut(s) 162, 998, 1137
DdeI CTNAG 7 cut(s) 52, 338, 488, 1047, 1260, 1545, 1681
Eam1104I CTCTTC 1 cut(s) 1011
EarI CTCTTC 1 cut(s) 1011
Eco130I CCWWGG 4 cut(s) 241, 378, 829, 1557
Eco147I AGGCCT 1 cut(s) 358
Eco24I GRGCYC 1 cut(s) 1615
Eco31I GGTCTC 1 cut(s) 1066
Eco47I GGWCC 1 cut(s) 492
Eco57I CTGAAG 2 cut(s) 581, 1418
EcoNI CCTNNNNNAGG 1 cut(s) 833
EcoRII CCWGG 2 cut(s) 1132, 1620
EcoT14I CCWWGG 4 cut(s) 241, 378, 829, 1557
EcoT22I ATGCAT 1 cut(s) 632
EcoT38I GRGCYC 1 cut(s) 1615
ErhI CCWWGG 4 cut(s) 241, 378, 829, 1557
FauI CCCGC 1 cut(s) 689
FauNDI CATATG 1 cut(s) 977
Fnu4HI GCNGC 1 cut(s) 1023
FokI GGATG 5 cut(s) 34, 852, 956, 1044, 1540
FriOI GRGCYC 1 cut(s) 1615
Fsp4HI GCNGC 1 cut(s) 1023
FspBI CTAG 1 cut(s) 1490
GluI GCNGC 1 cut(s) 1023
GsaI CCCAGC 1 cut(s) 1241
HaeIII GGCC 2 cut(s) 358, 422
HapII CCGG 1 cut(s) 24
HincII GTYRAC 1 cut(s) 588
HindII GTYRAC 1 cut(s) 588
HindIII AAGCTT 1 cut(s) 1352
HinfI GANTC 3 cut(s) 132, 180, 1524
HpaII CCGG 1 cut(s) 24
HphI GGTGA 3 cut(s) 418, 797, 1138
Hpy166II GTNNAC 3 cut(s) 514, 588, 636
Hpy188I TCNGA 5 cut(s) 55, 561, 660, 1666, 1690
Hpy188III TCNNGA 3 cut(s) 24, 212, 490
Hpy8I GTNNAC 3 cut(s) 514, 588, 636
HpyAV CCTTC 2 cut(s) 556, 934
HpyCH4III ACNGT 3 cut(s) 496, 1065, 1141
HpyCH4IV ACGT 1 cut(s) 266
HpyF10VI GCNNNNNNNGC 3 cut(s) 1031, 1085, 1375
HpyF3I CTNAG 7 cut(s) 52, 338, 488, 1047, 1260, 1545, 1681
HpySE526I ACGT 1 cut(s) 266
Kpn2I TCCGGA 1 cut(s) 23
LmnI GCTCC 4 cut(s) 293, 524, 1135, 1359
Lsp1109I GCAGC 1 cut(s) 1009
LweI GCATC 4 cut(s) 682, 1066, 1194, 1562
MaeI CTAG 1 cut(s) 1490
MaeII ACGT 1 cut(s) 266
MaeIII GTNAC 8 cut(s) 87, 424, 436, 777, 817, 856, 918, 1204
MboII GAAGA 7 cut(s) 512, 1028, 1292, 1412, 1421, 1424, 1502
MfeI CAATTG 2 cut(s) 260, 813
MflI RGATCY 3 cut(s) 59, 1342, 1442
MhlI GDGCHC 3 cut(s) 44, 1048, 1615
MluCI AATT 8 cut(s) 260, 479, 567, 702, 813, 927, 1111, 1413
MlyI GAGTC 2 cut(s) 189, 1533
MmeI TCCRAC 1 cut(s) 1194
Mph1103I ATGCAT 1 cut(s) 632
MroI TCCGGA 1 cut(s) 23
MroXI GAANNNNTTC 1 cut(s) 555
MseI TTAA 5 cut(s) 30, 675, 1107, 1178, 1563
MslI CAYNNNNRTG 1 cut(s) 1232
MspA1I CMGCKG 1 cut(s) 764
MspI CCGG 1 cut(s) 24
MspR9I CCNGG 2 cut(s) 1134, 1622
MunI CAATTG 2 cut(s) 260, 813
Mva1269I GAATGC 1 cut(s) 632
MvaI CCWGG 2 cut(s) 1134, 1622
MvnI CGCG 1 cut(s) 1397
MwoI GCNNNNNNNGC 3 cut(s) 1031, 1085, 1375
NcoI CCATGG 1 cut(s) 378
NdeI CATATG 1 cut(s) 977
NlaIV GGNNCC 2 cut(s) 289, 1344
NmuCI GTSAC 4 cut(s) 87, 424, 856, 1204
NsiI ATGCAT 1 cut(s) 632
NspI RCATGY 4 cut(s) 634, 966, 989, 1237
NspV TTCGAA 2 cut(s) 1278, 1513
PaeI GCATGC 2 cut(s) 989, 1237
PaqCI CACCTGC 1 cut(s) 437
PceI AGGCCT 1 cut(s) 358
PciI ACATGT 1 cut(s) 962
PctI GAATGC 1 cut(s) 632
PdmI GAANNNNTTC 1 cut(s) 555
PfeI GAWTC 1 cut(s) 132
PflFI GACNNNGTC 1 cut(s) 1391
PflMI CCANNNNNTGG 1 cut(s) 547
PkrI GCNGC 1 cut(s) 1024
PleI GAGTC 2 cut(s) 188, 1532
PpsI GAGTC 2 cut(s) 188, 1532
PscI ACATGT 1 cut(s) 962
PsiI TTATAA 1 cut(s) 713
Psp6I CCWGG 2 cut(s) 1132, 1620
PspFI CCCAGC 1 cut(s) 1237
PspGI CCWGG 2 cut(s) 1132, 1620
PspN4I GGNNCC 2 cut(s) 289, 1344
PspPI GGNCC 1 cut(s) 492
PstI CTGCAG 1 cut(s) 307
PsuI RGATCY 3 cut(s) 59, 1342, 1442
PsyI GACNNNGTC 1 cut(s) 1391
PvuII CAGCTG 1 cut(s) 764
RsaI GTAC 3 cut(s) 163, 999, 1138
RsaNI GTAC 3 cut(s) 162, 998, 1137
RseI CAYNNNNRTG 1 cut(s) 1232
SaqAI TTAA 5 cut(s) 30, 675, 1107, 1178, 1563
SatI GCNGC 1 cut(s) 1023
Sau96I GGNCC 1 cut(s) 492
SchI GAGTC 2 cut(s) 189, 1533
ScrFI CCNGG 2 cut(s) 1134, 1622
SduI GDGCHC 3 cut(s) 44, 1048, 1615
SfaNI GCATC 4 cut(s) 682, 1066, 1194, 1562
SfcI CTRYAG 1 cut(s) 303
SfuI TTCGAA 2 cut(s) 1278, 1513
SinI GGWCC 1 cut(s) 492
SmiMI CAYNNNNRTG 1 cut(s) 1232
SmlI CTYRAG 1 cut(s) 1406
SmoI CTYRAG 1 cut(s) 1406
SphI GCATGC 2 cut(s) 989, 1237
Sse9I AATT 8 cut(s) 260, 479, 567, 702, 813, 927, 1111, 1413
SseBI AGGCCT 1 cut(s) 358
SsiI CCGC 5 cut(s) 9, 432, 682, 737, 1397
SspMI CTAG 1 cut(s) 1490
StuI AGGCCT 1 cut(s) 358
StyD4I CCNGG 2 cut(s) 1132, 1620
StyI CCWWGG 4 cut(s) 241, 378, 829, 1557
TaaI ACNGT 3 cut(s) 496, 1065, 1141
TaiI ACGT 1 cut(s) 269
TaqI TCGA 2 cut(s) 1278, 1513
TaqII GACCGA 1 cut(s) 1666
TasI AATT 8 cut(s) 260, 479, 567, 702, 813, 927, 1111, 1413
TfiI GAWTC 1 cut(s) 132
Tru1I TTAA 5 cut(s) 30, 675, 1107, 1178, 1563
Tru9I TTAA 5 cut(s) 30, 675, 1107, 1178, 1563
TscAI CASTG 6 cut(s) 870, 1104, 1321, 1344, 1488, 1607
TseFI GTSAC 4 cut(s) 87, 424, 856, 1204
TseI GCWGC 1 cut(s) 1022
Tsp45I GTSAC 4 cut(s) 87, 424, 856, 1204
TspDTI ATGAA 7 cut(s) 290, 460, 519, 593, 606, 1104, 1605
TspGWI ACGGA 1 cut(s) 238
TspRI CASTG 6 cut(s) 870, 1104, 1321, 1344, 1488, 1607
Tth111I GACNNNGTC 1 cut(s) 1391
Van91I CCANNNNNTGG 1 cut(s) 547
VpaK11BI GGWCC 1 cut(s) 492
XagI CCTNNNNNAGG 1 cut(s) 833
XapI RAATTY 2 cut(s) 927, 1111
XceI RCATGY 4 cut(s) 634, 966, 989, 1237
XcmI CCANNNNNNNNNTGG 2 cut(s) 607, 1628
XmnI GAANNNNTTC 1 cut(s) 555
XspI CTAG 1 cut(s) 1490
Zsp2I ATGCAT 1 cut(s) 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.