Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004938

Physical Location & Seq

Genomic Coordinates Forward (+)

71624587 .. 71628391

Gene Structure 3805 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0594400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGACAAGTAGTTATAGCCCGTACAGTCGCATCATTTTTACGTGTTACCTTTACCTTCCAAAACTGGTTTCTATTCTCTCACTGTTTACTGTTGTGAGCGAAATCATAGTTTCGTATCTGATATTTCCAATGGCGGAGCCATCACCGCCGACGATGAGTGAGAACCAGAACCAGAATCCAAGCTCGGCGTGGCCGGCGACGCACATGACTGACGTGGATGTGGACGCCTTGGCTCACTGCACCAGCTACCTTAGCCTCCAGGACGTCTCCAACATGGCCATGACCTGCAAGTACCTCCAAAAAGTCGCCCACTCCGACTCTATCTGGCGCCGCTTCTTCAGGGAGAGTTGGCCGCAGCAAACACCTGCATTTGCTTCGCCAACTTCAGGAGTTAGGGAAGCGTATTTACGGCGGCGCACGGATTTGCTGCAATTCAAGTTTTCGGACCCGGTGGTTGCCGATTTCATCACAGATACAAAGCCTGTTGACCACATTTTATTGAATGAAAAGAATATAATCTTCTCTAAGGGTTCAGTGATACAAGTGATAAAGATTGATGACTGGTTAAGTGGGAGGGATTCGGTTGTCACACTAAGTGATCACAGTGCAAGAATTACTTGTATGAGACTGTTTTCGCTTAATGAAACATCTTTATATCGAAGTGAAGCACAAAAGAAAGAGAATGTTTTGGTAACTTCAAGCTCCGATCATGGTATCCGGCTATGGTGGAAGGGTGCTTGCCGACGATGTTTTACAGGTCACAAAGGCTCAGTTACGACCCTGTCTGATAAATTGTTAGGCAATGGCACTGGAAAAGTATTGGCAAGTGGAGGGGAAGATGGCACAGTTCGCCTTTGGTCTCTTACTTCCAGTGGAAGACGTGGTCAGCATGCTTTAAAGGCTACTTTCTATGGTCATGAGAAACCCATCAAATTGATGTCAGTTGCTGGGCATAAAACTTCTATTTTGGTAACTGTTACAGGAGATTCTAAGGTAAGGTTGTGGGATGCAGCTGCACAGTCTGCTGTTCCTTCTTCATCTTGTGTGGGAATGACTTCAATTCCTGGTCCCCTTATAAACATGAAGTGCCATGAACAATTGCTCTATCTTGCTGCCGGTTCCTCTGTTGCTGTAATCGATCTGAGGACAATGAGAAAAGTTCTCCCATATTCGATAGATGAAAGGCTATGTTCTTTTGATGCCATTCCTTCAAAATCCTTGTTCTGTGTTGGCAGCAGTAATGGCAGAGCGATGCTTTACGATATCAGGAGGGTCAAGCTCCCCAACTCGAAAGCAGAACCAGTAATCGAGTTGGATGGTGGACACATTGGGCCATTGACTCACTTGAACATGGATTCATACAAAATAGTTACAGGAGGCCGAGGCAGGGGAGATTCTCATGTTAATATTTGGGAGTCCAACACTGGTGCACTCGTCAGTTCCCTGACTTGTGATGTGGAGGAAGCAAGTATGGATGCCCTAGCTGTAAATGGGTGTCAAATTGTTACTGCCAACACCAGCCATATGGAAGATTCGGGAGTTCTACGCTATAGGGACTTCAGCAATGCTTCATGTCCTGCTGTTAATAGTGAAGGTGACCATGTTTCAAAGTTTTGGAATCCACAATCTTATAGTGATAGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01210 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01210 map01230

Pfam Domains

Protein Families

AA_kinase

Protein Analysis

548

Amino Acids

60.28

Weight (kDa)

7.91

Isoelectric Point (pI)

45.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	79 - 114	2.6e-06	F-box-like
WD40_CDC20-Fz	PF24807	193 - 343	1.4e-09	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	210 - 423	3.2e-12	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	224 - 343	2.7e-12	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	226 - 340	6.2e-06	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	227 - 337	5.5e-07	WDR3 second beta-propeller domain
WD40	PF00400	246 - 287	2.7e-07	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	268 - 483	7.4e-20	THOC3 beta-propeller domain
WD40_Prp19	PF24814	271 - 480	1.6e-09	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004938)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02020 AT5G14060 AT5G14060 AT5G14060
fragaria_vesca	FvH4_6g54240 FvH4_6g54240 FvH4_6g54240 FvH4_6g54240 FvH4_6g54240 FvH4_6g54240 FvH4_6g54240
malus_domestica	MD09G1003700.v1.1 MD17G1007300.v1.1
prunus_persica	Prupe.3G312900_v2.0.a1 Prupe.3G312900_v2.0.a1
pyrus_communis	pycom111g00270 pycom17g00290
rosa_chinensis	RchiOBHm_Chr2g0176441
rosa_laevigata	RLG00000022413
rosa_multiflora	Rmu_co8048038.1_g000001 Rmu_sc0009140.1_g000011
rosa_roxburghii	Rroxscaffold_2G00076440
rosa_rugosa	Rorug02G0594300 Rorug02G0594400 Rorug02G0594500 Rorug02G0594600
rosa_samantha	Rh2BG684300 Rh2CG647100 Rh2DG697900
rosa_wichuraiana	Rw2G055190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1076
AarI	CACCTGC	1 cut(s)	373
AatII	GACGTC	1 cut(s)	267
Acc36I	ACCTGC	2 cut(s)	293, 373
AccB1I	GGYRCC	1 cut(s)	327
AciI	CCGC	5 cut(s)	134, 146, 331, 353, 412
AcoI	YGGCCR	3 cut(s)	191, 276, 350
AcuI	CTGAAG	3 cut(s)	322, 369, 1543
AcyI	GRCGYC	3 cut(s)	225, 264, 328
AdeI	CACNNNGTG	1 cut(s)	596
AfaI	GTAC	2 cut(s)	23, 293
AfiI	CCNNNNNNNGG	2 cut(s)	386, 1387
AflIII	ACRYGT	1 cut(s)	41
AgsI	TTSAA	7 cut(s)	436, 502, 699, 1059, 1212, 1348, 1608
AjiI	CACGTC	2 cut(s)	214, 881
AjnI	CCWGG	2 cut(s)	258, 1063
AjuI	GAANNNNNNNTTGG	2 cut(s)	52, 84
AluBI	AGCT	6 cut(s)	183, 246, 702, 1013, 1279, 1484
AluI	AGCT	6 cut(s)	183, 246, 702, 1013, 1279, 1484
Alw21I	GWGCWC	1 cut(s)	1432
Alw26I	GTCTC	3 cut(s)	271, 619, 864
Alw44I	GTGCAC	1 cut(s)	1428
AlwNI	CAGNNNCTG	1 cut(s)	947
AoxI	GGCC	5 cut(s)	191, 276, 350, 1331, 1378
ApaLI	GTGCAC	1 cut(s)	1428
ApeKI	GCWGC	6 cut(s)	355, 427, 1010, 1013, 1112, 1233
Asp700I	GAANNNNTTC	1 cut(s)	1054
AspLEI	GCGC	2 cut(s)	330, 417
AspS9I	GGNCC	3 cut(s)	445, 1067, 1331
AsuC2I	CCSGG	1 cut(s)	449
AsuHPI	GGTGA	2 cut(s)	135, 1607
AvaII	GGWCC	2 cut(s)	445, 1067
BaeGI	GKGCMC	1 cut(s)	1432
BalI	TGGCCA	1 cut(s)	278
BanI	GGYRCC	1 cut(s)	327
BarI	GAAGNNNNNNTAC	2 cut(s)	390, 422
BbsI	GAAGAC	1 cut(s)	883
Bbv12I	GWGCWC	1 cut(s)	1432
BbvI	GCAGC	6 cut(s)	367, 414, 1000, 1022, 1099, 1245
BccI	CCATC	4 cut(s)	148, 833, 935, 1310
BceAI	ACGGC	1 cut(s)	425
BcgI	CGANNNNNNTGC	2 cut(s)	357, 391
BciT130I	CCWGG	2 cut(s)	260, 1065
BciVI	GTATCC	1 cut(s)	725
BclI	TGATCA	1 cut(s)	598
BcnI	CCSGG	1 cut(s)	449
BcoDI	GTCTC	3 cut(s)	271, 619, 864
BfaI	CTAG	1 cut(s)	1481
BfmI	CTRYAG	1 cut(s)	1549
BfoI	RGCGCY	1 cut(s)	331
BfuAI	ACCTGC	2 cut(s)	293, 373
BfuI	GTATCC	1 cut(s)	725
BisI	GCNGC	9 cut(s)	331, 353, 356, 413, 428, 1011, 1014, 1113, 1234
BlsI	GCNGC	9 cut(s)	332, 354, 357, 414, 429, 1012, 1015, 1114, 1235
Bme1390I	CCNGG	3 cut(s)	260, 449, 1065
Bme18I	GGWCC	2 cut(s)	445, 1067
BmgBI	CACGTC	2 cut(s)	214, 881
BmgT120I	GGNCC	3 cut(s)	445, 1067, 1331
BmiI	GGNNCC	5 cut(s)	138, 329, 447, 1069, 1120
BmrFI	CCNGG	3 cut(s)	260, 449, 1065
BmsI	GCATC	5 cut(s)	39, 997, 1189, 1242, 1465
BpiI	GAAGAC	1 cut(s)	883
BpmI	CTGGAG	1 cut(s)	242
Bpu10I	CCTNAGC	1 cut(s)	251
BpuMI	CCSGG	1 cut(s)	449
Bsa29I	ATCGAT	1 cut(s)	1137
BsaAI	YACGTR	1 cut(s)	42
BsaHI	GRCGYC	3 cut(s)	225, 264, 328
BsaI	GGTCTC	1 cut(s)	864
BsaJI	CCNNGG	2 cut(s)	228, 1381
Bsc4I	CCNNNNNNNGG	2 cut(s)	386, 1387
Bse118I	RCCGGY	2 cut(s)	193, 1115
Bse1I	ACTGG	6 cut(s)	69, 566, 814, 870, 1301, 1429
Bse3DI	GCAATG	2 cut(s)	808, 1570
BseBI	CCWGG	2 cut(s)	260, 1065
BseCI	ATCGAT	1 cut(s)	1137
BseDI	CCNNGG	2 cut(s)	228, 1381
BseGI	GGATG	4 cut(s)	223, 1012, 1321, 1480
BseLI	CCNNNNNNNGG	2 cut(s)	386, 1387
BseMI	GCAATG	2 cut(s)	808, 1570
BseMII	CTCAG	2 cut(s)	783, 1133
BseNI	ACTGG	6 cut(s)	69, 566, 814, 870, 1301, 1429
BseSI	GKGCMC	1 cut(s)	1432
BseXI	GCAGC	6 cut(s)	367, 414, 1000, 1022, 1099, 1245
BseYI	CCCAGC	1 cut(s)	947
BsgI	GTGCAG	2 cut(s)	223, 999
BshFI	GGCC	5 cut(s)	193, 278, 352, 1333, 1380
BshNI	GGYRCC	1 cut(s)	327
BshVI	ATCGAT	1 cut(s)	1137
BsiHKAI	GWGCWC	1 cut(s)	1432
BsiSI	CCGG	4 cut(s)	194, 449, 718, 1116
BslFI	GGGAC	2 cut(s)	1053, 1568
BslI	CCNNNNNNNGG	2 cut(s)	386, 1387
BsmAI	GTCTC	3 cut(s)	271, 619, 864
BsmBI	CGTCTC	1 cut(s)	271
BsmFI	GGGAC	2 cut(s)	1053, 1568
BsnI	GGCC	5 cut(s)	193, 278, 352, 1333, 1380
Bso31I	GGTCTC	1 cut(s)	864
Bsp1286I	GDGCHC	1 cut(s)	1432
Bsp143I	GATC	3 cut(s)	598, 706, 1138
BspACI	CCGC	5 cut(s)	134, 146, 331, 353, 412
BspANI	GGCC	5 cut(s)	193, 278, 352, 1333, 1380
BspCNI	CTCAG	2 cut(s)	782, 1134
BspDI	ATCGAT	1 cut(s)	1137
BspHI	TCATGA	1 cut(s)	916
BspLI	GGNNCC	5 cut(s)	138, 329, 447, 1069, 1120
BspMI	ACCTGC	2 cut(s)	293, 373
BspT107I	GGYRCC	1 cut(s)	327
BspTNI	GGTCTC	1 cut(s)	864
BsrDI	GCAATG	2 cut(s)	808, 1570
BsrFI	RCCGGY	2 cut(s)	193, 1115
BsrI	ACTGG	6 cut(s)	69, 566, 814, 870, 1301, 1429
BssAI	RCCGGY	2 cut(s)	193, 1115
BssECI	CCNNGG	2 cut(s)	228, 1381
BssMI	GATC	3 cut(s)	598, 706, 1138
BssNI	GRCGYC	3 cut(s)	225, 264, 328
BssT1I	CCWWGG	1 cut(s)	228
Bst2UI	CCWGG	2 cut(s)	260, 1065
Bst4CI	ACNGT	8 cut(s)	26, 84, 91, 605, 630, 847, 976, 1020
BstACI	GRCGYC	3 cut(s)	225, 264, 328
BstAPI	GCANNNNNTGC	1 cut(s)	1022
BstBAI	YACGTR	1 cut(s)	42
BstC8I	GCNNGC	3 cut(s)	195, 739, 891
BstDEI	CTNAG	6 cut(s)	251, 525, 593, 769, 990, 1142
BstEII	GGTNACC	1 cut(s)	1595
BstF5I	GGATG	4 cut(s)	223, 1012, 1321, 1480
BstH2I	RGCGCY	1 cut(s)	331
BstHHI	GCGC	2 cut(s)	330, 417
BstKTI	GATC	3 cut(s)	601, 709, 1141
BstMAI	GTCTC	3 cut(s)	271, 619, 864
BstMBI	GATC	3 cut(s)	598, 706, 1138
BstMWI	GCNNNNNNNGC	8 cut(s)	145, 194, 199, 252, 849, 899, 1022, 1242
BstNI	CCWGG	2 cut(s)	260, 1065
BstNSI	RCATGY	1 cut(s)	893
BstPI	GGTNACC	1 cut(s)	1595
BstSCI	CCNGG	3 cut(s)	258, 447, 1063
BstSFI	CTRYAG	1 cut(s)	1549
BstSLI	GKGCMC	1 cut(s)	1432
BstV1I	GCAGC	6 cut(s)	367, 414, 1000, 1022, 1099, 1245
BstV2I	GAAGAC	1 cut(s)	883
BstXI	CCANNNNNNTGG	1 cut(s)	1525
Bsu15I	ATCGAT	1 cut(s)	1137
BsuI	GTATCC	1 cut(s)	725
BsuRI	GGCC	5 cut(s)	193, 278, 352, 1333, 1380
BsuTUI	ATCGAT	1 cut(s)	1137
BtgZI	GCGATG	1 cut(s)	1265
BtrI	CACGTC	2 cut(s)	214, 881
BtsCI	GGATG	4 cut(s)	223, 1012, 1321, 1480
BtsI	GCAGTG	1 cut(s)	235
BtsIMutI	CAGTG	7 cut(s)	80, 235, 540, 610, 807, 877, 1422
BveI	ACCTGC	2 cut(s)	293, 373
Cac8I	GCNNGC	3 cut(s)	195, 739, 891
CaiI	CAGNNNCTG	1 cut(s)	947
CciI	TCATGA	1 cut(s)	916
CfoI	GCGC	2 cut(s)	330, 417
Cfr10I	RCCGGY	2 cut(s)	193, 1115
Cfr13I	GGNCC	3 cut(s)	445, 1067, 1331
ClaI	ATCGAT	1 cut(s)	1137
CseI	GACGC	2 cut(s)	208, 233
Csp6I	GTAC	2 cut(s)	22, 292
CviQI	GTAC	2 cut(s)	22, 292
DdeI	CTNAG	6 cut(s)	251, 525, 593, 769, 990, 1142
DinI	GGCGCC	1 cut(s)	329
DpnI	GATC	3 cut(s)	600, 708, 1140
DpnII	GATC	3 cut(s)	598, 706, 1138
DraI	TTTAAA	1 cut(s)	897
DraIII	CACNNNGTG	1 cut(s)	596
EaeI	YGGCCR	3 cut(s)	191, 276, 350
EciI	GGCGGA	1 cut(s)	149
Eco130I	CCWWGG	1 cut(s)	228
Eco31I	GGTCTC	1 cut(s)	864
Eco32I	GATATC	1 cut(s)	1264
Eco47I	GGWCC	2 cut(s)	445, 1067
Eco57I	CTGAAG	3 cut(s)	322, 369, 1543
Eco91I	GGTNACC	1 cut(s)	1595
EcoO65I	GGTNACC	1 cut(s)	1595
EcoRII	CCWGG	2 cut(s)	258, 1063
EcoRV	GATATC	1 cut(s)	1264
EcoT14I	CCWWGG	1 cut(s)	228
EgeI	GGCGCC	1 cut(s)	329
EheI	GGCGCC	1 cut(s)	329
ErhI	CCWWGG	1 cut(s)	228
Esp3I	CGTCTC	1 cut(s)	271
FalI	AAGNNNNNCTT	2 cut(s)	601, 633
FaqI	GGGAC	2 cut(s)	1053, 1568
FauNDI	CATATG	1 cut(s)	1524
FbaI	TGATCA	1 cut(s)	598
Fnu4HI	GCNGC	9 cut(s)	331, 353, 356, 413, 428, 1011, 1014, 1113, 1234
FokI	GGATG	4 cut(s)	230, 1019, 1328, 1487
Fsp4HI	GCNGC	9 cut(s)	331, 353, 356, 413, 428, 1011, 1014, 1113, 1234
FspBI	CTAG	1 cut(s)	1481
GlaI	GCGC	2 cut(s)	329, 416
GluI	GCNGC	9 cut(s)	331, 353, 356, 413, 428, 1011, 1014, 1113, 1234
GsaI	CCCAGC	1 cut(s)	951
GsuI	CTGGAG	1 cut(s)	242
HaeII	RGCGCY	1 cut(s)	331
HaeIII	GGCC	5 cut(s)	193, 278, 352, 1333, 1380
HapII	CCGG	4 cut(s)	194, 449, 718, 1116
HgaI	GACGC	2 cut(s)	208, 233
HhaI	GCGC	2 cut(s)	330, 417
Hin1I	GRCGYC	3 cut(s)	225, 264, 328
Hin6I	GCGC	2 cut(s)	328, 415
HinP1I	GCGC	2 cut(s)	328, 415
HincII	GTYRAC	1 cut(s)	487
HindII	GTYRAC	1 cut(s)	487
HpaII	CCGG	4 cut(s)	194, 449, 718, 1116
HphI	GGTGA	2 cut(s)	135, 1607
Hpy166II	GTNNAC	5 cut(s)	87, 223, 487, 1322, 1430
Hpy188I	TCNGA	6 cut(s)	120, 316, 445, 706, 787, 1143
Hpy188III	TCNNGA	4 cut(s)	387, 917, 1267, 1536
Hpy8I	GTNNAC	5 cut(s)	87, 223, 487, 1322, 1430
Hpy99I	CGWCG	3 cut(s)	154, 202, 747
HpyAV	CCTTC	5 cut(s)	65, 724, 1041, 1218, 1586
HpyCH4III	ACNGT	8 cut(s)	26, 84, 91, 605, 630, 847, 976, 1020
HpyCH4IV	ACGT	4 cut(s)	41, 213, 264, 880
HpyCH4V	TGCA	8 cut(s)	240, 288, 368, 430, 608, 1010, 1016, 1430
HpyF10VI	GCNNNNNNNGC	8 cut(s)	145, 194, 199, 252, 849, 899, 1022, 1242
HpyF3I	CTNAG	6 cut(s)	251, 525, 593, 769, 990, 1142
HpySE526I	ACGT	4 cut(s)	41, 213, 264, 880
Hsp92I	GRCGYC	3 cut(s)	225, 264, 328
HspAI	GCGC	2 cut(s)	328, 415
KasI	GGCGCC	1 cut(s)	327
KroI	GCCGGC	1 cut(s)	193
KroNI	GCCGGC	1 cut(s)	195
Ksp22I	TGATCA	1 cut(s)	598
Kzo9I	GATC	3 cut(s)	598, 706, 1138
LmnI	GCTCC	3 cut(s)	136, 707, 1284
Lsp1109I	GCAGC	6 cut(s)	367, 414, 1000, 1022, 1099, 1245
LweI	GCATC	5 cut(s)	39, 997, 1189, 1242, 1465
MaeI	CTAG	1 cut(s)	1481
MaeII	ACGT	4 cut(s)	41, 213, 264, 880
MalI	GATC	3 cut(s)	600, 708, 1140
MboI	GATC	3 cut(s)	598, 706, 1138
MboII	GAAGA	6 cut(s)	328, 511, 848, 888, 1026, 1541
MfeI	CAATTG	1 cut(s)	1097
MhlI	GDGCHC	1 cut(s)	1432
MlsI	TGGCCA	1 cut(s)	278
MluCI	AATT	7 cut(s)	431, 612, 791, 932, 1059, 1097, 1500
MluNI	TGGCCA	1 cut(s)	278
Mly113I	GGCGCC	1 cut(s)	328
MlyI	GAGTC	3 cut(s)	311, 1333, 1424
MmeI	TCCRAC	4 cut(s)	294, 339, 1293, 1443
Mox20I	TGGCCA	1 cut(s)	278
MroNI	GCCGGC	1 cut(s)	193
MroXI	GAANNNNTTC	1 cut(s)	1054
MscI	TGGCCA	1 cut(s)	278
MseI	TTAA	5 cut(s)	566, 639, 896, 1404, 1584
MslI	CAYNNNNRTG	1 cut(s)	278
Msp20I	TGGCCA	1 cut(s)	278
MspA1I	CMGCKG	1 cut(s)	1013
MspI	CCGG	4 cut(s)	194, 449, 718, 1116
MspR9I	CCNGG	3 cut(s)	260, 449, 1065
MunI	CAATTG	1 cut(s)	1097
MvaI	CCWGG	2 cut(s)	260, 1065
MwoI	GCNNNNNNNGC	8 cut(s)	145, 194, 199, 252, 849, 899, 1022, 1242
NaeI	GCCGGC	1 cut(s)	195
NarI	GGCGCC	1 cut(s)	328
NciI	CCSGG	1 cut(s)	449
NdeI	CATATG	1 cut(s)	1524
NdeII	GATC	3 cut(s)	598, 706, 1138
NgoMIV	GCCGGC	1 cut(s)	193
NlaIV	GGNNCC	5 cut(s)	138, 329, 447, 1069, 1120
NmeAIII	GCCGAG	2 cut(s)	164, 1406
NmuCI	GTSAC	3 cut(s)	586, 758, 1595
NspI	RCATGY	1 cut(s)	893
PaeI	GCATGC	1 cut(s)	893
PagI	TCATGA	1 cut(s)	916
PaqCI	CACCTGC	1 cut(s)	373
PcsI	WCGNNNNNNNCGW	1 cut(s)	312
PdiI	GCCGGC	1 cut(s)	195
PdmI	GAANNNNTTC	1 cut(s)	1054
PfeI	GAWTC	7 cut(s)	175, 578, 986, 1355, 1394, 1532, 1618
PflFI	GACNNNGTC	2 cut(s)	781, 882
PfoI	TCCNGGA	1 cut(s)	258
PkrI	GCNGC	9 cut(s)	332, 354, 357, 414, 429, 1012, 1015, 1114, 1235
PleI	GAGTC	3 cut(s)	311, 1333, 1423
PluTI	GGCGCC	1 cut(s)	331
PpsI	GAGTC	3 cut(s)	311, 1333, 1423
Ppu21I	YACGTR	1 cut(s)	42
PsiI	TTATAA	1 cut(s)	1076
Psp6I	CCWGG	2 cut(s)	258, 1063
PspEI	GGTNACC	1 cut(s)	1595
PspFI	CCCAGC	1 cut(s)	947
PspGI	CCWGG	2 cut(s)	258, 1063
PspN4I	GGNNCC	5 cut(s)	138, 329, 447, 1069, 1120
PspPI	GGNCC	3 cut(s)	445, 1067, 1331
PstNI	CAGNNNCTG	1 cut(s)	947
PsyI	GACNNNGTC	2 cut(s)	781, 882
PvuII	CAGCTG	1 cut(s)	1013
RsaI	GTAC	2 cut(s)	23, 293
RsaNI	GTAC	2 cut(s)	22, 292
RseI	CAYNNNNRTG	1 cut(s)	278
SaqAI	TTAA	5 cut(s)	566, 639, 896, 1404, 1584
SatI	GCNGC	9 cut(s)	331, 353, 356, 413, 428, 1011, 1014, 1113, 1234
Sau3AI	GATC	3 cut(s)	598, 706, 1138
Sau96I	GGNCC	3 cut(s)	445, 1067, 1331
SchI	GAGTC	3 cut(s)	311, 1333, 1424
ScrFI	CCNGG	3 cut(s)	260, 449, 1065
SduI	GDGCHC	1 cut(s)	1432
SfaNI	GCATC	5 cut(s)	39, 997, 1189, 1242, 1465
SfcI	CTRYAG	1 cut(s)	1549
SfoI	GGCGCC	1 cut(s)	329
SinI	GGWCC	2 cut(s)	445, 1067
SmiMI	CAYNNNNRTG	1 cut(s)	278
SphI	GCATGC	1 cut(s)	893
Sse9I	AATT	7 cut(s)	431, 612, 791, 932, 1059, 1097, 1500
SsiI	CCGC	5 cut(s)	134, 146, 331, 353, 412
SspDI	GGCGCC	1 cut(s)	327
SspI	AATATT	1 cut(s)	1408
SspMI	CTAG	1 cut(s)	1481
StyD4I	CCNGG	3 cut(s)	258, 447, 1063
StyI	CCWWGG	1 cut(s)	228
TaaI	ACNGT	8 cut(s)	26, 84, 91, 605, 630, 847, 976, 1020
TaiI	ACGT	4 cut(s)	44, 216, 267, 883
TaqI	TCGA	5 cut(s)	658, 1137, 1172, 1289, 1308
TasI	AATT	7 cut(s)	431, 612, 791, 932, 1059, 1097, 1500
TauI	GCSGC	3 cut(s)	333, 355, 415
TfiI	GAWTC	7 cut(s)	175, 578, 986, 1355, 1394, 1532, 1618
Tru1I	TTAA	5 cut(s)	566, 639, 896, 1404, 1584
Tru9I	TTAA	5 cut(s)	566, 639, 896, 1404, 1584
TscAI	CASTG	7 cut(s)	87, 242, 540, 610, 814, 877, 1429
TseFI	GTSAC	3 cut(s)	586, 758, 1595
TseI	GCWGC	6 cut(s)	355, 427, 1010, 1013, 1112, 1233
Tsp45I	GTSAC	3 cut(s)	586, 758, 1595
TspDTI	ATGAA	9 cut(s)	454, 519, 657, 1026, 1097, 1107, 1194, 1347, 1560
TspGWI	ACGGA	1 cut(s)	434
TspRI	CASTG	7 cut(s)	87, 242, 540, 610, 814, 877, 1429
Tth111I	GACNNNGTC	2 cut(s)	781, 882
VneI	GTGCAC	1 cut(s)	1428
VpaK11BI	GGWCC	2 cut(s)	445, 1067
XceI	RCATGY	1 cut(s)	893
XcmI	CCANNNNNNNNNTGG	1 cut(s)	186
XmnI	GAANNNNTTC	1 cut(s)	1054
XspI	CTAG	1 cut(s)	1481
ZraI	GACGTC	1 cut(s)	265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.