Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013890

Physical Location & Seq

Genomic Coordinates Forward (+)

734892 .. 735987

Gene Structure 1096 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G03190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 645 bp

ATGGTGGTCAAAGTATATGGGCAGATAAAAGCAGCTAATCCACAAAGAGTATTGCTCTGCTTTTTGGAAAAAGACATCGAGTTTGAAGTAATTCATGTCGATCTCGATAAACTTGAACAGAAAAAACCACAACATCTTCTTCGTCAGCCGTTTGGTCAAGTTCCAGCTATTGAAGATGGATATCTGAAGCTTTTTGAATCGCGAGCCATAGCGAGGTACTACGCGACAAAGTATGCGGACCAAGGAACGGACCTATTGGGCAAGACTTTGGAGGGACGAGCCATTGTGGACCAGTGGGTGGAAGTTGAGAATAACTATTTCTACGCTGTGGCTCTACCCTTAGTTATGAACGTCGTCTTTAAGCCCAAGTCTGGTAAGCCATGCGACGTCGCTTTGGTTGAGGAGCTAAAGGTCAAGTTCGACAAGGTCCTGGATGTGTATGAGAACCGGTTAGCTACGAACCGGTACTTGGGCGGTGATGAATTCACATTAGCTGATTTGAGTCATATGCCCGGTATGAGATATATCATGAATGAAACCAGTTTGAGTGGTTTGGTTACGTCTCGAGAGAATCTCAACCGGTGGTGGAATGAGATTTCGGCTAGACCGGCTTGGAAGAAGCTCATGGAATTGGCTGCCTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009705 GO:0009812 GO:0009889 GO:0009962 GO:0009987 GO:0016020 GO:0016740 GO:0016765 GO:0019222 GO:0019748 GO:0031090 GO:0034641 GO:0042221 GO:0042440 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046283 GO:0050789 GO:0050896 GO:0051186 GO:0065007 GO:0071704 GO:0080090 GO:0098588 GO:0098754 GO:0098805 GO:1900384 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_N

Protein Analysis

214

Amino Acids

24.64

Weight (kDa)

6.34

Isoelectric Point (pI)

28.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N	PF02798	1 - 74	1.5e-15	Glutathione S-transferase, N-terminal domain
GST_N_2	PF13409	14 - 76	3.2e-09	Glutathione S-transferase, N-terminal domain
GST_N_3	PF13417	15 - 80	7.1e-08	Glutathione S-transferase, N-terminal domain
GST_C	PF00043	113 - 203	1.4e-12	Glutathione S-transferase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03190 AT5G17220
fragaria_vesca	FvH4_1g27460
malus_domestica	MD17G1272100.v1.1
prunus_persica	Prupe.3G013600_v2.0.a1
pyrus_communis	pycom17g27080
rosa_chinensis	RchiOBHm_Chr3g0488551
rosa_laevigata	RLG00000022944
rosa_multiflora	Rmu_co8213432.1_g000001 Rmu_sc0005363.1_g000020
rosa_roxburghii	Rroxscaffold_6G00394180
rosa_rugosa	Rorug03G0239200.1
rosa_samantha	Rh3AG288000 Rh3BG324700 Rh3CG322100 Rh3DG320800
rosa_wichuraiana	Rw3G025500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	390
AccB7I	CCANNNNNTGG	1 cut(s)	298
AccII	CGCG	2 cut(s)	202, 224
AciI	CCGC	2 cut(s)	236, 474
AcsI	RAATTY	1 cut(s)	482
AcuI	CTGAAG	1 cut(s)	206
AcyI	GRCGYC	1 cut(s)	387
AfaI	GTAC	2 cut(s)	218, 467
AfiI	CCNNNNNNNGG	5 cut(s)	213, 247, 298, 371, 469
AgeI	ACCGGT	3 cut(s)	447, 462, 579
AgsI	TTSAA	4 cut(s)	86, 116, 173, 197
AjnI	CCWGG	1 cut(s)	429
AjuI	GAANNNNNNNTTGG	2 cut(s)	452, 484
AluBI	AGCT	7 cut(s)	35, 167, 190, 406, 455, 494, 622
AluI	AGCT	7 cut(s)	35, 167, 190, 406, 455, 494, 622
Alw26I	GTCTC	1 cut(s)	567
Ama87I	CYCGRG	1 cut(s)	564
ApeKI	GCWGC	2 cut(s)	32, 635
ApoI	RAATTY	1 cut(s)	482
ArsI	GACNNNNNNTTYG	2 cut(s)	65, 97
AsiGI	ACCGGT	3 cut(s)	447, 462, 579
Asp700I	GAANNNNTTC	1 cut(s)	90
AspS9I	GGNCC	4 cut(s)	238, 250, 289, 427
AsuC2I	CCSGG	1 cut(s)	513
AsuHPI	GGTGA	1 cut(s)	488
AvaI	CYCGRG	1 cut(s)	564
AvaII	GGWCC	4 cut(s)	238, 250, 289, 427
BbvI	GCAGC	2 cut(s)	44, 622
BccI	CCATC	1 cut(s)	170
BceAI	ACGGC	1 cut(s)	133
BciT130I	CCWGG	1 cut(s)	431
BcnI	CCSGG	1 cut(s)	513
BcoDI	GTCTC	1 cut(s)	567
BfaI	CTAG	1 cut(s)	603
BisI	GCNGC	2 cut(s)	33, 636
BlsI	GCNGC	2 cut(s)	34, 637
Bme1390I	CCNGG	2 cut(s)	431, 513
Bme18I	GGWCC	4 cut(s)	238, 250, 289, 427
BmeT110I	CYCGRG	1 cut(s)	564
BmgT120I	GGNCC	4 cut(s)	238, 250, 289, 427
BmrFI	CCNGG	2 cut(s)	431, 513
BplI	GAGNNNNNCTC	4 cut(s)	39, 71, 558, 590
BpuMI	CCSGG	1 cut(s)	513
BsaBI	GATNNNNATC	1 cut(s)	180
BsaHI	GRCGYC	1 cut(s)	387
BsaJI	CCNNGG	1 cut(s)	241
BsaWI	WCCGGW	3 cut(s)	447, 462, 579
Bsc4I	CCNNNNNNNGG	5 cut(s)	213, 247, 298, 371, 469
Bse118I	RCCGGY	4 cut(s)	447, 462, 579, 607
Bse1I	ACTGG	2 cut(s)	292, 540
Bse8I	GATNNNNATC	1 cut(s)	180
BseBI	CCWGG	1 cut(s)	431
BseDI	CCNNGG	1 cut(s)	241
BseGI	GGATG	1 cut(s)	439
BseJI	GATNNNNATC	1 cut(s)	180
BseLI	CCNNNNNNNGG	5 cut(s)	213, 247, 298, 371, 469
BseNI	ACTGG	2 cut(s)	292, 540
BseRI	GAGGAG	1 cut(s)	416
BseXI	GCAGC	2 cut(s)	44, 622
Bsh1236I	CGCG	2 cut(s)	202, 224
BshTI	ACCGGT	3 cut(s)	447, 462, 579
BsiHKCI	CYCGRG	1 cut(s)	564
BsiSI	CCGG	5 cut(s)	448, 463, 513, 580, 608
BslFI	GGGAC	1 cut(s)	288
BslI	CCNNNNNNNGG	5 cut(s)	213, 247, 298, 371, 469
BsmAI	GTCTC	1 cut(s)	567
BsmBI	CGTCTC	1 cut(s)	567
BsmFI	GGGAC	1 cut(s)	288
BsoBI	CYCGRG	1 cut(s)	564
Bsp143I	GATC	1 cut(s)	100
Bsp68I	TCGCGA	1 cut(s)	202
BspACI	CCGC	2 cut(s)	236, 474
BspFNI	CGCG	2 cut(s)	202, 224
BspHI	TCATGA	1 cut(s)	528
BsrFI	RCCGGY	4 cut(s)	447, 462, 579, 607
BsrI	ACTGG	2 cut(s)	292, 540
BssAI	RCCGGY	4 cut(s)	447, 462, 579, 607
BssECI	CCNNGG	1 cut(s)	241
BssMI	GATC	1 cut(s)	100
BssNI	GRCGYC	1 cut(s)	387
BssT1I	CCWWGG	1 cut(s)	241
Bst2UI	CCWGG	1 cut(s)	431
BstACI	GRCGYC	1 cut(s)	387
BstC8I	GCNNGC	1 cut(s)	204
BstDEI	CTNAG	1 cut(s)	340
BstF5I	GGATG	1 cut(s)	439
BstFNI	CGCG	2 cut(s)	202, 224
BstKTI	GATC	1 cut(s)	103
BstMAI	GTCTC	1 cut(s)	567
BstMBI	GATC	1 cut(s)	100
BstMWI	GCNNNNNNNGC	1 cut(s)	608
BstNI	CCWGG	1 cut(s)	431
BstSCI	CCNGG	2 cut(s)	429, 511
BstUI	CGCG	2 cut(s)	202, 224
BstV1I	GCAGC	2 cut(s)	44, 622
BtsCI	GGATG	1 cut(s)	439
BtsIMutI	CAGTG	1 cut(s)	299
BtuMI	TCGCGA	1 cut(s)	202
Cac8I	GCNNGC	1 cut(s)	204
CciI	TCATGA	1 cut(s)	528
Cfr10I	RCCGGY	4 cut(s)	447, 462, 579, 607
Cfr13I	GGNCC	4 cut(s)	238, 250, 289, 427
Csp6I	GTAC	2 cut(s)	217, 466
CspAI	ACCGGT	3 cut(s)	447, 462, 579
CviAII	CATG	4 cut(s)	95, 381, 529, 625
CviQI	GTAC	2 cut(s)	217, 466
DdeI	CTNAG	1 cut(s)	340
DpnI	GATC	1 cut(s)	102
DpnII	GATC	1 cut(s)	100
Eco130I	CCWWGG	1 cut(s)	241
Eco32I	GATATC	1 cut(s)	182
Eco47I	GGWCC	4 cut(s)	238, 250, 289, 427
Eco57I	CTGAAG	1 cut(s)	206
Eco88I	CYCGRG	1 cut(s)	564
EcoO109I	RGGNCCY	1 cut(s)	427
EcoRI	GAATTC	1 cut(s)	482
EcoRII	CCWGG	1 cut(s)	429
EcoRV	GATATC	1 cut(s)	182
EcoT14I	CCWWGG	1 cut(s)	241
ErhI	CCWWGG	1 cut(s)	241
Esp3I	CGTCTC	1 cut(s)	567
FaeI	CATG	4 cut(s)	98, 384, 532, 628
FaqI	GGGAC	1 cut(s)	288
FatI	CATG	4 cut(s)	94, 380, 528, 624
FauNDI	CATATG	1 cut(s)	507
Fnu4HI	GCNGC	2 cut(s)	33, 636
FokI	GGATG	1 cut(s)	446
Fsp4HI	GCNGC	2 cut(s)	33, 636
FspBI	CTAG	1 cut(s)	603
GluI	GCNGC	2 cut(s)	33, 636
HapII	CCGG	5 cut(s)	448, 463, 513, 580, 608
Hin1I	GRCGYC	1 cut(s)	387
Hin1II	CATG	4 cut(s)	98, 384, 532, 628
HindIII	AAGCTT	1 cut(s)	188
HinfI	GANTC	3 cut(s)	197, 502, 571
HpaII	CCGG	5 cut(s)	448, 463, 513, 580, 608
HphI	GGTGA	1 cut(s)	488
Hpy166II	GTNNAC	1 cut(s)	289
Hpy188I	TCNGA	1 cut(s)	186
Hpy188III	TCNNGA	5 cut(s)	104, 201, 529, 564, 566
Hpy8I	GTNNAC	1 cut(s)	289
Hpy99I	CGWCG	3 cut(s)	356, 389, 392
HpyCH4IV	ACGT	3 cut(s)	351, 387, 560
HpyF10VI	GCNNNNNNNGC	1 cut(s)	608
HpyF3I	CTNAG	1 cut(s)	340
HpySE526I	ACGT	3 cut(s)	351, 387, 560
Hsp92I	GRCGYC	1 cut(s)	387
Hsp92II	CATG	4 cut(s)	98, 384, 532, 628
Kzo9I	GATC	1 cut(s)	100
LmnI	GCTCC	1 cut(s)	403
Lsp1109I	GCAGC	2 cut(s)	44, 622
MaeI	CTAG	1 cut(s)	603
MaeII	ACGT	3 cut(s)	351, 387, 560
MaeIII	GTNAC	1 cut(s)	556
MalI	GATC	1 cut(s)	102
MboI	GATC	1 cut(s)	100
MboII	GAAGA	4 cut(s)	128, 131, 185, 628
MluCI	AATT	3 cut(s)	90, 482, 629
MlyI	GAGTC	1 cut(s)	511
MnlI	CCTC	3 cut(s)	207, 265, 394
MroXI	GAANNNNTTC	1 cut(s)	90
MseI	TTAA	2 cut(s)	360, 643
MspI	CCGG	5 cut(s)	448, 463, 513, 580, 608
MspR9I	CCNGG	2 cut(s)	431, 513
MvaI	CCWGG	1 cut(s)	431
MvnI	CGCG	2 cut(s)	202, 224
MwoI	GCNNNNNNNGC	1 cut(s)	608
NciI	CCSGG	1 cut(s)	513
NdeI	CATATG	1 cut(s)	507
NdeII	GATC	1 cut(s)	100
NlaIII	CATG	4 cut(s)	98, 384, 532, 628
NruI	TCGCGA	1 cut(s)	202
PaeR7I	CTCGAG	1 cut(s)	564
PagI	TCATGA	1 cut(s)	528
PdmI	GAANNNNTTC	1 cut(s)	90
PfeI	GAWTC	2 cut(s)	197, 571
PflFI	GACNNNGTC	1 cut(s)	425
PflMI	CCANNNNNTGG	1 cut(s)	298
PfoI	TCCNGGA	1 cut(s)	429
PinAI	ACCGGT	3 cut(s)	447, 462, 579
PkrI	GCNGC	2 cut(s)	34, 637
PleI	GAGTC	1 cut(s)	510
PpsI	GAGTC	1 cut(s)	510
PpuMI	RGGWCCY	1 cut(s)	427
Psp5II	RGGWCCY	1 cut(s)	427
Psp6I	CCWGG	1 cut(s)	429
PspGI	CCWGG	1 cut(s)	429
PspPI	GGNCC	4 cut(s)	238, 250, 289, 427
PspPPI	RGGWCCY	1 cut(s)	427
PsyI	GACNNNGTC	1 cut(s)	425
RruI	TCGCGA	1 cut(s)	202
RsaI	GTAC	2 cut(s)	218, 467
RsaNI	GTAC	2 cut(s)	217, 466
SaqAI	TTAA	2 cut(s)	360, 643
SatI	GCNGC	2 cut(s)	33, 636
Sau3AI	GATC	1 cut(s)	100
Sau96I	GGNCC	4 cut(s)	238, 250, 289, 427
SchI	GAGTC	1 cut(s)	511
ScrFI	CCNGG	2 cut(s)	431, 513
Sfr274I	CTCGAG	1 cut(s)	564
SinI	GGWCC	4 cut(s)	238, 250, 289, 427
SlaI	CTCGAG	1 cut(s)	564
SmlI	CTYRAG	1 cut(s)	564
SmoI	CTYRAG	1 cut(s)	564
Sse9I	AATT	3 cut(s)	90, 482, 629
SsiI	CCGC	2 cut(s)	236, 474
SspMI	CTAG	1 cut(s)	603
StyD4I	CCNGG	2 cut(s)	429, 511
StyI	CCWWGG	1 cut(s)	241
TaiI	ACGT	3 cut(s)	354, 390, 563
TaqI	TCGA	5 cut(s)	78, 99, 105, 420, 565
TasI	AATT	3 cut(s)	90, 482, 629
TfiI	GAWTC	2 cut(s)	197, 571
Tru1I	TTAA	2 cut(s)	360, 643
Tru9I	TTAA	2 cut(s)	360, 643
TscAI	CASTG	1 cut(s)	299
TseI	GCWGC	2 cut(s)	32, 635
TspDTI	ATGAA	5 cut(s)	83, 362, 495, 545, 549
TspGWI	ACGGA	1 cut(s)	263
TspRI	CASTG	1 cut(s)	299
Tth111I	GACNNNGTC	1 cut(s)	425
Van91I	CCANNNNNTGG	1 cut(s)	298
VpaK11BI	GGWCC	4 cut(s)	238, 250, 289, 427
XapI	RAATTY	1 cut(s)	482
XhoI	CTCGAG	1 cut(s)	564
XmnI	GAANNNNTTC	1 cut(s)	90
XspI	CTAG	1 cut(s)	603
ZraI	GACGTC	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.