AT3G04240

UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0010024
Physical Location & Seq
Reverse (-)
1113914 .. 1120933
7020 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G04240.2

Sequence Viewer

Length: 2934 bp
ATGATCTCGTCCAAAAACGGAGCTGCCATGATCTCCCGACCTGTCTTTCTTTCCGATCGAGTTGATGAAGTCTTCTCTAGAAAGCTTGATTTGTCTGTCTCTTCTTCGTCTTCTTCGAGCCTCCTCCAGCAGTTCAATAAGACTCATGAAGGTGATGATGACGCACGCCTGGCTCTTGCTCATCAGCTATACAAAGGAGGCGATTTCAAACAAGCCCTGGAGCACAGCAACATGGTTTACCAGAGAAACCCATTACGCACTGATAATCTTCTTCTAATTGGTGCTATTTATTACCAGCTTCAAGAGTATGATATGTGCATAGCTCGAAATGAAGAAGCTCTTCGTATTCAACCTCAGTTTGCTGAGTGTTATGGAAACATGGCAAACGCGTGGAAGGAAAAAGGGGACACTGATCGTGCAATCCGCTACTATTTAATTGCAATTGAGCTGAGGCCCAATTTTGCTGATGCTTGGTCGAACTTGGCAAGTGCATACATGCGAAAGGGAAGACTCAGTGAGGCAACACAATGCTGTCAGCAGGCCCTCTCATTGAATCCACTTCTGGTTGACGCACATAGTAATCTGGGGAATCTGATGAAGGCTCAAGGATTGATTCATGAAGCATACAGTTGTTACCTTGAAGCTGTTCGTATACAACCAACATTTGCTATTGCATGGTCGAATCTTGCTGGTCTTTTCATGGAGTCAGGTGATCTCAACAGAGCCCTTCAATACTACAAGGAAGCTGTGAAGTTGAAACCTGCATTCCCTGATGCATATTTAAATTTAGGAAACGTGTATAAGGCCCTCGGGAGACCTACTGAAGCGATCATGTGTTATCAGCATGCCTTACAGATGCGGCCAAATTCTGCAATGGCATTTGGGAATATAGCCAGTATATACTATGAGCAAGGTCAACTAGATTTAGCAATTCGACACTACAAGCAGGCTCTCTCCCGGGATCCACGATTTTTGGAGGCTTACAATAACTTGGGTAATGCATTGAAGGATATTGGGCGAGTTGATGAAGCAGTTCGGTGTTATAATCAATGTCTTGCTTTACAACCAAATCATCCACAAGCCATGGCTAATCTTGGAAACATTTATATGGAGTGGAATATGATGGGTCCTGCTTCCTCATTATTCAAGGCTACTCTGGCTGTAACTACAGGGCTATCTGCTCCGTTCAATAACCTTGCTATAATTTACAAGCAACAGGGAAATTACTCGGATGCTATATCCTGCTATAATGAGGTTCTTCGTATTGACCCATTGGCAGCTGACGCTCTGGTTAATAGAGGGAATACTTACAAAGAGATCGGGAGGGTAACTGAAGCAATTCAGGATTACATGCATGCTATAAACTTCCGGCCTACAATGGCTGAAGCTCACGCAAACCTGGCCTCAGCTTACAAGGATAGTGGGCATGTAGAAGCTGCCATTACGAGCTATAAGCAGGCCTTGCTTCTACGACCAGACTTCCCAGAAGCAACGTGCAACCTTCTACACACCTTACAGTGTGTATGCTGTTGGGAGGACCGTAGCAAAATGTTCGCTGAAGTTGAAAGCATTATTAGGAGGCAAATAAATATGTCGGTCCTTCCAAGTGTCCAGCCCTTCCATGCAATAGCATATCCTATTGACCCTATTCTTGCCCTTGAAATCAGTCGTAAATACGCTGCACACTGCTCCATAATCGCTTCTCGTTTTGGACTACCTCCTTTTACCCATCCAGCTGGGCTCCCTGTAAAACGTGAGGGAGGATTTAAGAGATTAAGGATTGGATACGTGAGCAGTGATTTTGGTAACCATCCGTTGTCACACCTCATGGGATCAGTGTTTGGGATGCACAACAGAGAAAACGTTGAGGTTTTCTGCTATGCTCTGAGTGCAAATGATAATACTGAGTGGAGACAGCGAATCCAGTCAGAAGCCGAGCATTTCCTGGACGTTTCTGCTATGTCATCTGATGCTATCGCCAAAATTATAAACCAAGACAAAATCCAGATCCTCATCAATCTAAACGGTTATACCAAGGGGGCTAGAAATGAAATATTTGCCATGCAGCCTGCTCCGATCCAGGTTTCATATATGGGCTTCCCGGGTACCACTGGAGCAACCTATATTGACTATCTAGTGACTGATGAGTTCGTGTCTCCTCTGCAATATGCACATATTTACTCAGAGAAGCTGGTCCACCTTCCCCATTGCTACTTTGTCAATGATTACAAGCAGAAAAATCAGGATGTGTTGGATCCAAATTCGAAGCCCAAGCGATCAGACTATGGACTTCCTGAAGACAAATTCATATTTGCATGCTTCAACCAACTGTACAAAATGGATCCTGAGATCGTTAATACTTGGTGCAACATTCTTAAACGAGTACCCAACAGTGCTCTTTGGCTTCTCCGTTTTCCAGCAGCCGGAGAGATGAGGTTTCGCACATATGCTGCTGCCCAAGGTGTACAGCCTGATCAAATTATCTTCACTGATGTTGCCATGAAGAGTGAACATATCAGGCGAAGTGTCCTTGCCGATGTAATCCTCGACACGCCCCTGTGCAATGGACACACAACAGGAACAGATGTACTGTGGGCTGGTGTACCAATGATAACGTTACCACTTGAGAAAATGGCAACTCGAGTGGCTGGATCACTCTGCCTTGCAACTGGTCTGGGCCATGGGATGATTGTTAACAGCTTGGAGGAGTACGAAGAGAAGGCTGTCTCTTTGGCACTGAACAAGCCAAAACTTCAGGCACTGACTAAGGAATTGAGGGCTAGCCGCTTAACCTGTCCTCTATTCGACACCATGCGTTGGGTGAAGAATCTGGAGAGGTCATACTTCAAAATGTGGAACCTCCATTGCTCTGGGCAGCAGCCACAACACTTCAAGGTGTTGGAAAACGACCTAGAATTCCCACATGACAGATAA

Protein Analysis

977

Amino Acids

110.11

Weight (kDa)

6.85

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_19 PF14559 1 - 57 5.4e-08 Tetratricopeptide repeat
TPR_11 PF13414 2 - 38 2.1e-10 TPR repeat
TPR_16 PF13432 2 - 57 6e-06 Tetratricopeptide repeat
TPR_1 PF00515 24 - 56 7.8e-09 Tetratricopeptide repeat
TPR_8 PF13181 25 - 56 8.5e-07 Tetratricopeptide repeat
TPR_12 PF13424 26 - 87 9.7e-13 Tetratricopeptide repeat
TPR_1 PF00515 58 - 91 6.9e-08 Tetratricopeptide repeat
TPR_16 PF13432 65 - 126 9.5e-08 Tetratricopeptide repeat
TPR_11 PF13414 66 - 106 8e-11 TPR repeat
TPR_19 PF14559 69 - 128 5.4e-08 Tetratricopeptide repeat
TPR_12 PF13424 92 - 155 5.5e-06 Tetratricopeptide repeat
TPR_1 PF00515 93 - 125 1.4e-08 Tetratricopeptide repeat
TPR_8 PF13181 93 - 125 4.8e-07 Tetratricopeptide repeat
TPR_2 PF07719 93 - 125 2.8e-07 Tetratricopeptide repeat
TPR_11 PF13414 99 - 137 2.8e-07 TPR repeat
TPR_1 PF00515 163 - 191 5.2e-08 Tetratricopeptide repeat
TPR_2 PF07719 164 - 191 2.8e-06 Tetratricopeptide repeat
TPR_16 PF13432 166 - 217 1e-06 Tetratricopeptide repeat
TPR_11 PF13414 169 - 208 1.1e-08 TPR repeat
TPR_11 PF13414 201 - 242 8.8e-08 TPR repeat
TPR_11 PF13414 236 - 268 4.2e-06 TPR repeat
Glyco_transf_41 PF13844 275 - 513 2.4e-84 Glycosyl transferase family 41
Glyco_transf_41 PF13844 526 - 711 3.1e-68 Glycosyl transferase family 41
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1044, 1988
Acc36I ACCTGC 1 cut(s) 769
Acc65I GGTACC 1 cut(s) 2105
AccB1I GGYRCC 1 cut(s) 2105
AccB7I CCANNNNNTGG 1 cut(s) 2817
AccI GTMKAC 1 cut(s) 652
AccII CGCG 1 cut(s) 389
AciI CCGC 3 cut(s) 424, 859, 2785
AclI AACGTT 2 cut(s) 1863, 2615
AcoI YGGCCR 1 cut(s) 860
AcsI RAATTY 5 cut(s) 784, 865, 2260, 2303, 2915
AcuI CTGAAG 6 cut(s) 843, 1353, 1404, 1578, 2316, 2738
AfaI GTAC 7 cut(s) 2107, 2333, 2385, 2466, 2589, 2604, 2711
AfiI CCNNNNNNNGG 2 cut(s) 2423, 2817
AflIII ACRYGT 2 cut(s) 387, 795
AjnI CCWGG 5 cut(s) 168, 216, 1398, 1944, 2079
Alw21I GWGCWC 2 cut(s) 225, 2398
Alw26I GTCTC 5 cut(s) 103, 808, 1906, 2160, 2731
AlwNI CAGNNNCTG 1 cut(s) 2761
Ama87I CYCGRG 4 cut(s) 809, 957, 2101, 2640
AoxI GGCC 8 cut(s) 452, 540, 804, 860, 1370, 1401, 1458, 2677
ApoI RAATTY 5 cut(s) 784, 865, 2260, 2303, 2915
Asp700I GAANNNNTTC 4 cut(s) 339, 645, 1032, 1338
Asp718I GGTACC 1 cut(s) 2105
AspS9I GGNCC 8 cut(s) 453, 541, 805, 1127, 1537, 1597, 2194, 2677
AsuC2I CCSGG 4 cut(s) 958, 959, 2102, 2103
AsuHPI GGTGA 3 cut(s) 164, 722, 2833
AsuII TTCGAA 1 cut(s) 2264
AsuNHI GCTAGC 1 cut(s) 2780
AvaI CYCGRG 4 cut(s) 809, 957, 2101, 2640
AvaII GGWCC 4 cut(s) 1127, 1537, 1597, 2194
BamHI GGATCC 3 cut(s) 961, 2254, 2341
BanI GGYRCC 1 cut(s) 2105
BanII GRGCYC 2 cut(s) 727, 1743
BbsI GAAGAC 4 cut(s) 64, 102, 514, 2304
Bbv12I GWGCWC 2 cut(s) 225, 2398
BbvCI CCTCAGC 2 cut(s) 449, 1405
BccI CCATC 3 cut(s) 1117, 1737, 1818
BcgI CGANNNNNNTGC 2 cut(s) 1534, 1568
BciT130I CCWGG 5 cut(s) 170, 218, 1400, 1946, 2081
BciVI GTATCC 1 cut(s) 1778
BclI TGATCA 1 cut(s) 2473
BcnI CCSGG 4 cut(s) 958, 959, 2102, 2103
BcoDI GTCTC 5 cut(s) 103, 808, 1906, 2160, 2731
BfaI CTAG 6 cut(s) 78, 920, 2043, 2135, 2781, 2912
BfmI CTRYAG 1 cut(s) 1167
BfuAI ACCTGC 1 cut(s) 769
BfuI GTATCC 1 cut(s) 1778
Bme1390I CCNGG 9 cut(s) 170, 218, 958, 959, 1400, 1946, 2081, 2102, 2103
Bme18I GGWCC 4 cut(s) 1127, 1537, 1597, 2194
BmeT110I CYCGRG 4 cut(s) 809, 957, 2101, 2640
BmgT120I GGNCC 8 cut(s) 453, 541, 805, 1127, 1537, 1597, 2194, 2677
BmiI GGNNCC 7 cut(s) 963, 1128, 1742, 2107, 2256, 2343, 2858
BmrFI CCNGG 9 cut(s) 170, 218, 958, 959, 1400, 1946, 2081, 2102, 2103
BmsI GCATC 6 cut(s) 457, 763, 846, 1222, 1836, 1960
BmtI GCTAGC 1 cut(s) 2784
BpiI GAAGAC 4 cut(s) 64, 102, 514, 2304
BpmI CTGGAG 4 cut(s) 110, 239, 2133, 2852
Bpu10I CCTNAGC 2 cut(s) 449, 1405
Bpu14I TTCGAA 1 cut(s) 2264
BpuEI CTTGAG 2 cut(s) 588, 2645
BpuMI CCSGG 4 cut(s) 958, 959, 2102, 2103
BsaAI YACGTR 1 cut(s) 1789
BsaBI GATNNNNATC 1 cut(s) 2012
BsaI GGTCTC 1 cut(s) 808
BsaJI CCNNGG 8 cut(s) 216, 808, 957, 1083, 2034, 2101, 2458, 2680
Bsc4I CCNNNNNNNGG 2 cut(s) 2423, 2817
Bse1I ACTGG 4 cut(s) 894, 1924, 2116, 2674
Bse3DI GCAATG 4 cut(s) 879, 2206, 2569, 2863
Bse8I GATNNNNATC 1 cut(s) 2012
BseBI CCWGG 5 cut(s) 170, 218, 1400, 1946, 2081
BseDI CCNNGG 8 cut(s) 216, 808, 957, 1083, 2034, 2101, 2458, 2680
BseGI GGATG 7 cut(s) 1072, 1237, 1729, 1810, 1851, 2251, 2691
BseJI GATNNNNATC 1 cut(s) 2012
BseLI CCNNNNNNNGG 2 cut(s) 2423, 2817
BseMI GCAATG 4 cut(s) 879, 2206, 2569, 2863
BseMII CTCAG 9 cut(s) 354, 368, 440, 526, 1419, 1877, 1896, 2196, 2337
BseNI ACTGG 4 cut(s) 894, 1924, 2116, 2674
BseRI GAGGAG 3 cut(s) 113, 2148, 2720
BseYI CCCAGC 1 cut(s) 1736
BsgI GTGCAG 1 cut(s) 1665
Bsh1236I CGCG 1 cut(s) 389
Bsh1285I CGRYCG 1 cut(s) 58
BshFI GGCC 8 cut(s) 454, 542, 806, 862, 1372, 1403, 1460, 2679
BshNI GGYRCC 1 cut(s) 2105
BsiEI CGRYCG 1 cut(s) 58
BsiHKAI GWGCWC 2 cut(s) 225, 2398
BsiHKCI CYCGRG 4 cut(s) 809, 957, 2101, 2640
BsiSI CCGG 4 cut(s) 958, 1369, 2102, 2424
BslFI GGGAC 1 cut(s) 419
BslI CCNNNNNNNGG 2 cut(s) 2423, 2817
BsmAI GTCTC 5 cut(s) 103, 808, 1906, 2160, 2731
BsmFI GGGAC 1 cut(s) 419
BsmI GAATGC 1 cut(s) 764
BsnI GGCC 8 cut(s) 454, 542, 806, 862, 1372, 1403, 1460, 2679
Bso31I GGTCTC 1 cut(s) 808
BsoBI CYCGRG 4 cut(s) 809, 957, 2101, 2640
Bsp119I TTCGAA 1 cut(s) 2264
Bsp1286I GDGCHC 4 cut(s) 225, 727, 1743, 2398
Bsp1407I TGTACA 2 cut(s) 2331, 2464
Bsp19I CCATGG 2 cut(s) 1083, 2680
BspACI CCGC 3 cut(s) 424, 859, 2785
BspANI GGCC 8 cut(s) 454, 542, 806, 862, 1372, 1403, 1460, 2679
BspCNI CTCAG 9 cut(s) 355, 367, 441, 525, 1418, 1878, 1897, 2195, 2338
BspFNI CGCG 1 cut(s) 389
BspHI TCATGA 2 cut(s) 145, 616
BspLI GGNNCC 7 cut(s) 963, 1128, 1742, 2107, 2256, 2343, 2858
BspMI ACCTGC 1 cut(s) 769
BspOI GCTAGC 1 cut(s) 2784
BspQI GCTCTTC 1 cut(s) 345
BspT104I TTCGAA 1 cut(s) 2264
BspT107I GGYRCC 1 cut(s) 2105
BspTNI GGTCTC 1 cut(s) 808
BsrDI GCAATG 4 cut(s) 879, 2206, 2569, 2863
BsrGI TGTACA 2 cut(s) 2331, 2464
BsrI ACTGG 4 cut(s) 894, 1924, 2116, 2674
BssECI CCNNGG 8 cut(s) 216, 808, 957, 1083, 2034, 2101, 2458, 2680
BssNAI GTATAC 1 cut(s) 653
BssT1I CCWWGG 4 cut(s) 1083, 2034, 2458, 2680
Bst1107I GTATAC 1 cut(s) 653
Bst2UI CCWGG 5 cut(s) 170, 218, 1400, 1946, 2081
Bst4CI ACNGT 7 cut(s) 629, 1518, 1541, 2027, 2331, 2393, 2592
Bst6I CTCTTC 4 cut(s) 106, 345, 2498, 2709
BstAPI GCANNNNNTGC 1 cut(s) 1462
BstAUI TGTACA 2 cut(s) 2331, 2464
BstBAI YACGTR 1 cut(s) 1789
BstBI TTCGAA 1 cut(s) 2264
BstC8I GCNNGC 9 cut(s) 166, 540, 846, 948, 1356, 1458, 2070, 2317, 2782
BstDSI CCRYGG 2 cut(s) 1083, 2680
BstEII GGTNACC 1 cut(s) 1805
BstF5I GGATG 7 cut(s) 1072, 1237, 1729, 1810, 1851, 2251, 2691
BstFNI CGCG 1 cut(s) 389
BstMAI GTCTC 5 cut(s) 103, 808, 1906, 2160, 2731
BstMCI CGRYCG 1 cut(s) 58
BstMWI GCNNNNNNNGC 6 cut(s) 170, 1157, 1283, 1400, 1462, 1889
BstNI CCWGG 5 cut(s) 170, 218, 1400, 1946, 2081
BstNSI RCATGY 6 cut(s) 499, 848, 1354, 1358, 1430, 2319
BstPI GGTNACC 1 cut(s) 1805
BstSCI CCNGG 9 cut(s) 168, 216, 956, 957, 1398, 1944, 2079, 2100, 2101
BstSFI CTRYAG 1 cut(s) 1167
BstUI CGCG 1 cut(s) 389
BstV2I GAAGAC 4 cut(s) 64, 102, 514, 2304
BstX2I RGATCY 4 cut(s) 961, 2007, 2254, 2341
BstXI CCANNNNNNTGG 2 cut(s) 1736, 2870
BstYI RGATCY 4 cut(s) 961, 2007, 2254, 2341
BstZ17I GTATAC 1 cut(s) 653
BsuI GTATCC 1 cut(s) 1778
BsuRI GGCC 8 cut(s) 454, 542, 806, 862, 1372, 1403, 1460, 2679
BtgI CCRYGG 2 cut(s) 1083, 2680
BtsCI GGATG 7 cut(s) 1072, 1237, 1729, 1810, 1851, 2251, 2691
BtsI GCAGTG 2 cut(s) 1684, 1801
BveI ACCTGC 1 cut(s) 769
Cac8I GCNNGC 9 cut(s) 166, 540, 846, 948, 1356, 1458, 2070, 2317, 2782
CaiI CAGNNNCTG 1 cut(s) 2761
CciI TCATGA 2 cut(s) 145, 616
Cfr13I GGNCC 8 cut(s) 453, 541, 805, 1127, 1537, 1597, 2194, 2677
Cfr9I CCCGGG 2 cut(s) 957, 2101
CseI GACGC 3 cut(s) 170, 578, 1292
Csp6I GTAC 7 cut(s) 2106, 2332, 2384, 2465, 2588, 2603, 2710
CspCI CAANNNNNGTGG 6 cut(s) 954, 989, 1402, 1437, 2625, 2660
CviQI GTAC 7 cut(s) 2106, 2332, 2384, 2465, 2588, 2603, 2710
DraI TTTAAA 1 cut(s) 783
EaeI YGGCCR 1 cut(s) 860
Eam1104I CTCTTC 4 cut(s) 106, 345, 2498, 2709
EarI CTCTTC 4 cut(s) 106, 345, 2498, 2709
Eco130I CCWWGG 4 cut(s) 1083, 2034, 2458, 2680
Eco147I AGGCCT 1 cut(s) 1460
Eco24I GRGCYC 2 cut(s) 727, 1743
Eco31I GGTCTC 1 cut(s) 808
Eco47I GGWCC 4 cut(s) 1127, 1537, 1597, 2194
Eco57I CTGAAG 6 cut(s) 843, 1353, 1404, 1578, 2316, 2738
Eco88I CYCGRG 4 cut(s) 809, 957, 2101, 2640
Eco91I GGTNACC 1 cut(s) 1805
EcoO109I RGGNCCY 3 cut(s) 541, 805, 1127
EcoO65I GGTNACC 1 cut(s) 1805
EcoRI GAATTC 1 cut(s) 2915
EcoRII CCWGG 5 cut(s) 168, 216, 1398, 1944, 2079
EcoT14I CCWWGG 4 cut(s) 1083, 2034, 2458, 2680
EcoT22I ATGCAT 3 cut(s) 778, 1003, 1356
EcoT38I GRGCYC 2 cut(s) 727, 1743
ErhI CCWWGG 4 cut(s) 1083, 2034, 2458, 2680
FalI AAGNNNNNCTT 4 cut(s) 324, 356, 1445, 1477
FaqI GGGAC 1 cut(s) 419
FauNDI CATATG 1 cut(s) 2446
FbaI TGATCA 1 cut(s) 2473
FblI GTMKAC 1 cut(s) 652
FokI GGATG 7 cut(s) 1059, 1244, 1716, 1797, 1858, 2258, 2698
FriOI GRGCYC 2 cut(s) 727, 1743
FspBI CTAG 6 cut(s) 78, 920, 2043, 2135, 2781, 2912
GsaI CCCAGC 1 cut(s) 1740
GsuI CTGGAG 4 cut(s) 110, 239, 2133, 2852
HaeIII GGCC 8 cut(s) 454, 542, 806, 862, 1372, 1403, 1460, 2679
HapII CCGG 4 cut(s) 958, 1369, 2102, 2424
HgaI GACGC 3 cut(s) 170, 578, 1292
HincII GTYRAC 3 cut(s) 568, 917, 2695
HindII GTYRAC 3 cut(s) 568, 917, 2695
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 9 cut(s) 142, 510, 553, 589, 613, 682, 704, 1920, 2827
HpaI GTTAAC 1 cut(s) 2695
HpaII CCGG 4 cut(s) 958, 1369, 2102, 2424
HphI GGTGA 3 cut(s) 164, 722, 2833
Hpy166II GTNNAC 9 cut(s) 238, 568, 653, 917, 2197, 2465, 2510, 2603, 2695
Hpy188I TCNGA 9 cut(s) 55, 594, 1231, 1887, 1930, 1969, 2076, 2185, 2281
Hpy8I GTNNAC 9 cut(s) 238, 568, 653, 917, 2197, 2465, 2510, 2603, 2695
HpyCH4III ACNGT 7 cut(s) 629, 1518, 1541, 2027, 2331, 2393, 2592
HpyCH4IV ACGT 7 cut(s) 795, 1493, 1753, 1788, 1863, 1950, 2615
HpyF10VI GCNNNNNNNGC 6 cut(s) 170, 1157, 1283, 1400, 1462, 1889
HpySE526I ACGT 7 cut(s) 795, 1493, 1753, 1788, 1863, 1950, 2615
KpnI GGTACC 1 cut(s) 2109
Ksp22I TGATCA 1 cut(s) 2473
KspAI GTTAAC 1 cut(s) 2695
LguI GCTCTTC 1 cut(s) 345
LmnI GCTCC 7 cut(s) 20, 220, 1186, 1694, 1746, 2077, 2114
LweI GCATC 6 cut(s) 457, 763, 846, 1222, 1836, 1960
MaeI CTAG 6 cut(s) 78, 920, 2043, 2135, 2781, 2912
MaeII ACGT 7 cut(s) 795, 1493, 1753, 1788, 1863, 1950, 2615
MaeIII GTNAC 7 cut(s) 632, 1162, 1327, 1805, 1818, 2137, 2616
MfeI CAATTG 1 cut(s) 441
MflI RGATCY 4 cut(s) 961, 2007, 2254, 2341
MhlI GDGCHC 4 cut(s) 225, 727, 1743, 2398
MluI ACGCGT 1 cut(s) 387
MlyI GAGTC 3 cut(s) 136, 504, 713
MmeI TCCRAC 2 cut(s) 2232, 2880
Mph1103I ATGCAT 3 cut(s) 778, 1003, 1356
MroXI GAANNNNTTC 4 cut(s) 339, 645, 1032, 1338
MseI TTAA 9 cut(s) 434, 782, 1293, 1767, 1775, 2355, 2376, 2694, 2789
MslI CAYNNNNRTG 2 cut(s) 150, 1106
MspA1I CMGCKG 2 cut(s) 1280, 1736
MspI CCGG 4 cut(s) 958, 1369, 2102, 2424
MspR9I CCNGG 9 cut(s) 170, 218, 958, 959, 1400, 1946, 2081, 2102, 2103
MunI CAATTG 1 cut(s) 441
Mva1269I GAATGC 1 cut(s) 764
MvaI CCWGG 5 cut(s) 170, 218, 1400, 1946, 2081
MvnI CGCG 1 cut(s) 389
MwoI GCNNNNNNNGC 6 cut(s) 170, 1157, 1283, 1400, 1462, 1889
NciI CCSGG 4 cut(s) 958, 959, 2102, 2103
NcoI CCATGG 2 cut(s) 1083, 2680
NdeI CATATG 1 cut(s) 2446
NheI GCTAGC 1 cut(s) 2780
NlaIV GGNNCC 7 cut(s) 963, 1128, 1742, 2107, 2256, 2343, 2858
NmeAIII GCCGAG 1 cut(s) 1960
NmuCI GTSAC 2 cut(s) 1818, 2137
NsiI ATGCAT 3 cut(s) 778, 1003, 1356
NspI RCATGY 6 cut(s) 499, 848, 1354, 1358, 1430, 2319
NspV TTCGAA 1 cut(s) 2264
PaeI GCATGC 3 cut(s) 848, 1358, 2319
PaeR7I CTCGAG 1 cut(s) 2640
PagI TCATGA 2 cut(s) 145, 616
PceI AGGCCT 1 cut(s) 1460
PciSI GCTCTTC 1 cut(s) 345
PcsI WCGNNNNNNNCGW 1 cut(s) 113
PctI GAATGC 1 cut(s) 764
PdmI GAANNNNTTC 4 cut(s) 339, 645, 1032, 1338
PfeI GAWTC 6 cut(s) 553, 589, 613, 682, 1920, 2827
PflMI CCANNNNNTGG 1 cut(s) 2817
PfoI TCCNGGA 1 cut(s) 1944
Ple19I CGATCG 1 cut(s) 58
PleI GAGTC 3 cut(s) 136, 504, 712
PpsI GAGTC 3 cut(s) 136, 504, 712
Ppu21I YACGTR 1 cut(s) 1789
PpuMI RGGWCCY 1 cut(s) 1127
PsiI TTATAA 2 cut(s) 1044, 1988
Psp1406I AACGTT 2 cut(s) 1863, 2615
Psp5II RGGWCCY 1 cut(s) 1127
Psp6I CCWGG 5 cut(s) 168, 216, 1398, 1944, 2079
PspEI GGTNACC 1 cut(s) 1805
PspFI CCCAGC 1 cut(s) 1736
PspGI CCWGG 5 cut(s) 168, 216, 1398, 1944, 2079
PspN4I GGNNCC 7 cut(s) 963, 1128, 1742, 2107, 2256, 2343, 2858
PspPI GGNCC 8 cut(s) 453, 541, 805, 1127, 1537, 1597, 2194, 2677
PspPPI RGGWCCY 1 cut(s) 1127
PspXI VCTCGAGB 1 cut(s) 2640
PstNI CAGNNNCTG 1 cut(s) 2761
PsuI RGATCY 4 cut(s) 961, 2007, 2254, 2341
PvuI CGATCG 1 cut(s) 58
PvuII CAGCTG 2 cut(s) 1280, 1736
RsaI GTAC 7 cut(s) 2107, 2333, 2385, 2466, 2589, 2604, 2711
RsaNI GTAC 7 cut(s) 2106, 2332, 2384, 2465, 2588, 2603, 2710
RseI CAYNNNNRTG 2 cut(s) 150, 1106
SapI GCTCTTC 1 cut(s) 345
SaqAI TTAA 9 cut(s) 434, 782, 1293, 1767, 1775, 2355, 2376, 2694, 2789
Sau96I GGNCC 8 cut(s) 453, 541, 805, 1127, 1537, 1597, 2194, 2677
SchI GAGTC 3 cut(s) 136, 504, 713
ScrFI CCNGG 9 cut(s) 170, 218, 958, 959, 1400, 1946, 2081, 2102, 2103
SduI GDGCHC 4 cut(s) 225, 727, 1743, 2398
SfaNI GCATC 6 cut(s) 457, 763, 846, 1222, 1836, 1960
SfcI CTRYAG 1 cut(s) 1167
Sfr274I CTCGAG 1 cut(s) 2640
SfuI TTCGAA 1 cut(s) 2264
SinI GGWCC 4 cut(s) 1127, 1537, 1597, 2194
SlaI CTCGAG 1 cut(s) 2640
SmaI CCCGGG 2 cut(s) 959, 2103
SmiI ATTTAAAT 1 cut(s) 783
SmiMI CAYNNNNRTG 2 cut(s) 150, 1106
SmlI CTYRAG 3 cut(s) 603, 2624, 2640
SmoI CTYRAG 3 cut(s) 603, 2624, 2640
SphI GCATGC 3 cut(s) 848, 1358, 2319
SseBI AGGCCT 1 cut(s) 1460
SsiI CCGC 3 cut(s) 424, 859, 2785
SspI AATATT 1 cut(s) 2055
SspMI CTAG 6 cut(s) 78, 920, 2043, 2135, 2781, 2912
StuI AGGCCT 1 cut(s) 1460
StyD4I CCNGG 9 cut(s) 168, 216, 956, 957, 1398, 1944, 2079, 2100, 2101
StyI CCWWGG 4 cut(s) 1083, 2034, 2458, 2680
SwaI ATTTAAAT 1 cut(s) 783
TaaI ACNGT 7 cut(s) 629, 1518, 1541, 2027, 2331, 2393, 2592
TaiI ACGT 7 cut(s) 798, 1496, 1756, 1791, 1866, 1953, 2618
TaqII GACCGA 1 cut(s) 1585
TatI WGTACW 3 cut(s) 2331, 2464, 2587
TauI GCSGC 2 cut(s) 862, 2787
TfiI GAWTC 6 cut(s) 553, 589, 613, 682, 1920, 2827
Tru1I TTAA 9 cut(s) 434, 782, 1293, 1767, 1775, 2355, 2376, 2694, 2789
Tru9I TTAA 9 cut(s) 434, 782, 1293, 1767, 1775, 2355, 2376, 2694, 2789
TseFI GTSAC 2 cut(s) 1818, 2137
Tsp45I GTSAC 2 cut(s) 1818, 2137
TspGWI ACGGA 4 cut(s) 33, 1173, 1803, 2399
TspMI CCCGGG 2 cut(s) 957, 2101
Van91I CCANNNNNTGG 1 cut(s) 2817
VpaK11BI GGWCC 4 cut(s) 1127, 1537, 1597, 2194
XapI RAATTY 5 cut(s) 784, 865, 2260, 2303, 2915
XbaI TCTAGA 1 cut(s) 77
XceI RCATGY 6 cut(s) 499, 848, 1354, 1358, 1430, 2319
XhoI CTCGAG 1 cut(s) 2640
XmaI CCCGGG 2 cut(s) 957, 2101
XmiI GTMKAC 1 cut(s) 652
XmnI GAANNNNTTC 4 cut(s) 339, 645, 1032, 1338
XspI CTAG 6 cut(s) 78, 920, 2043, 2135, 2781, 2912
Zsp2I ATGCAT 3 cut(s) 778, 1003, 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.