Rroxscaffold_6G00427070

UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0010024
Physical Location & Seq
Reverse (-)
47649059 .. 47658769
9711 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00427070.1

Sequence Viewer

Length: 2982 bp
ATGATGACGGTGCACGGCGAGGCGAGGCAGCCCCAGGCGGCGGCGTCTAGGGCTCAGTTTGGTGTGGAGTCTTTTAAGCCTGAGCCTTCTTCGCTCAGCTTAGTCTCCTTCAAGCCTCCTGATTCTCATGAAGTCGAATCTGAAATGGTGGATTTATTTGATTGTGTAGTGGATGAGGATGCGCATTTGGCTATTGCTCACCAAATGTACAAGTCCGGCAACTATAAAGAGGCCTTGGAGCGTAGCAATATCGTATATGAGAGGAATCCAATTCGAACTGATAACCTCCTTCTTTTGGGTGCAATATATTATCAGCTGCATGACTTTGATATGTGTATTGCCAAAAATGAAGAAGCCCTTCGAATTGAACCACATTTTGCTGAGTGTTATGGCAACATGGCCAATGCTTGGAAGGAAAAAGGCAATAGTGACCTTGCGATCCGCTACTATTTGATTGCCATTGAGTTGTTTGACCTTAGTCTCGTTTCGCTGCAGCTTCGACCCAATTTCTGTGATGCATGGTCAAACTTAGCTAGTGCGTACATGCGGAAAGGAAGGCTTGAAGAGGCAGCCCAGTGCTGTCGTCAAGCACTTCAGCTGAATCCCCATTTGGTTGACGCCCATAGCAACCTTGGTAATTTAATGAAAGCACGAGGCTTGGTGCAAGATGCATACAGTTGCTACCTCGAGGCTCTACGTATACAGCCAAATTTTGCTATTGCTTGGTCAAATCTTGCTGGCCTTTTCATGGAGTCTGGTGATCTTAATAGAGCTCTGCAGTATTATAAGGAGGCTGTGAAACTCAAACCTGCCTTTCCGGATGCGTATCTCAACCTTGGGAATGTTTATAAGGCTTTGGGATTGCCTCAAGAGGCAATTGTGTGTTATCAGCGTGCCCTGCAGACAAGACCTAACTATGCCATGGCTTTCGGTAATCTGGCCAGTACGTATTATGAGCAAGGTCAACTGGATTTGGCAGTCTTACATTACAAGCAAGCCATTGCTTGTGATCCAAGATTTTTGGAGGCTTACAATAATTTGGGTAACGCTTTGAAAGACATTGGCAGAGTGGACGAAGCAATTCAATGCTACAATCAATGCCTCACTCTACAACCTAATCATCCACAAGCACTTACCAACCTCGGGAATATTTATATGGAATGGAACATGGTAGCTGCTGCTGCTTCTTACTATAAGGCCACGTTGACTGTGACAACTGGGTTGTCTGCTCCTTTCAATAATCTTGCTATAATTTATAAACAACAGGGAAATTACGCAGACGCAATCTCTTGCTACAATGAGGTTCTTCGCATTGATCCTTTGGCAGCTGATGGGCTTGTCAATAGGGGCAACACTTACAAGGAGATTGGTAGAGTTAGCGAGGCAATTCAGGATTACATACATGCAATATCTGTCCGGCCAACTATGGCAGAAGCTCATGCAAACTTGGCTTCAGCTTACAAGGATAGTGGACATGTGGAGGCTGCTATTAAGAGCTATAAACAGGCATTACATCTTCGACCGGACTTTCCAGAGGCAACTTGTAATCTTTTACATACGTTACAGTGTGTGTGCAGTTGGGAGGACCGTGATAAAATGTTCGCTGAAGTTGAAGGCATTATCAGGAGGCAGATCAATATGTCTCTCTTGCCTAGTGTGCAGCCTTTCCACGCAATAGCATATCCTATTGATCCAATGCTTGCACTTGATATTAGCCGTAAATATGCTGCACAGTGCTCCATAATTGCATCCCGGTTTGGATTGACTGCCTTCAACCATCCTGCTCCAATTCCCATAAAGCGTAATGGTGGATTTGAGAGACTTAGAGTTGGATATGTAAGCAGTGACTTTGGTAACCACCCATTGTCACATCTTATGGGATCTGTTTTTGGGATGCACAATAAGGAGAATGTTGAGGTTTTCTGTTATGCCTTGAGTCCAAATGATGGAACGGAATGGAGACAGCGTACCCAGTCTGAAGCGGAGCACTTTGTTGATGTCTCATCTATGACATCAGATATGATTGCCAAAATGATTAATGAGGACAACATCCAGATTTTAATTAATCTTAATGGTTATACAAAGGGGGCGAGAAATGAAATATTTGCTATGCAGCCTGCACCTATTCAGGTTTCATACATGGGGTTCCCTGGGACCACTGGGGCAAATTACATTGATTACTTGGTCACTGATGAGTTTGTCTCACCTTTGCGCTTCTCACATATTTACTCTGAGAAGCTTGTTCATCTTCCACATTGCTACTTTGTGAATGACTATAAGCAGAAAAATCTGGATGTATTAGATCCAAATTGTCGGCACAAAAGATCAGATTATGGTCTCCCAGAGGATAAATTTATATTTGCAACCTTCAATCAGTTGTACAAAATGGATCCTGAAATATTTAATACTTGGTGCAATATTCTTAAACGTGTACCCAACAGTGCACTCTGGCTCCTCAGATTCCCAGCTGCAGGCGAAATGAGACTCCGTACATATGCTGCTGCTCAGGGAGTGCAAGCAGACCAGATTATTTTTACAGATGTTGCTATGAAAGGTGAACATATCAGGCGCAGTGCTTTAGCAGATTTGTTCCTTGACACGCCTTTATGCAATGCACATACAACCGGCACAGATGTTCTATGGGCCGGTTTACCAATGGTGACCCTTCCCCTTGAGAAGATGGCCACCAGGGTTGCTGGATCTTTGTGTCTCGCCACTGGACTGGGGGAGGAGATGATAGTTAGCAGTATGAAAGAGTATGAAGAGAAGGCAGTATCTTTGGCATTGAATCCCTCAAAGCTCCAGGCGCTTACCAACAAACTCAAGGCAGTCCGAATGACTTGCCCTCTGTTTGACACAACACGCTGGGTGAGGAATCTGGAAAGGGCTTATTTCAAAATGTGGAATCTGCATTGCTCAGGCCAGCGTCCCCAGCATTTTAAAGTTGCTGAGAATGATTCGGATTTCCCTTATGATAGATAG

Protein Analysis

993

Amino Acids

111.94

Weight (kDa)

6.05

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_8 PF13181 172 - 202 2.9e-06 Tetratricopeptide repeat
TPR_1 PF00515 172 - 203 7.2e-10 Tetratricopeptide repeat
TPR_2 PF07719 172 - 203 1.3e-08 Tetratricopeptide repeat
TPR_11 PF13414 179 - 217 3.1e-08 TPR repeat
TPR_1 PF00515 239 - 270 9.2e-06 Tetratricopeptide repeat
TPR_11 PF13414 249 - 287 5.2e-11 TPR repeat
TPR_19 PF14559 250 - 306 3.9e-08 Tetratricopeptide repeat
TPR_1 PF00515 273 - 306 7.5e-10 Tetratricopeptide repeat
TPR_2 PF07719 273 - 306 5.6e-06 Tetratricopeptide repeat
TPR_12 PF13424 275 - 336 1.4e-10 Tetratricopeptide repeat
TPR_16 PF13432 277 - 338 2.2e-06 Tetratricopeptide repeat
TPR_11 PF13414 291 - 321 1e-05 TPR repeat
TPR_1 PF00515 307 - 340 5.5e-06 Tetratricopeptide repeat
TPR_11 PF13414 316 - 355 2.8e-10 TPR repeat
TPR_17 PF13431 329 - 362 3.6e-07 Tetratricopeptide repeat
TPR_12 PF13424 341 - 403 8.2e-07 Tetratricopeptide repeat
TPR_1 PF00515 342 - 374 1.4e-09 Tetratricopeptide repeat
TPR_2 PF07719 342 - 374 4.3e-07 Tetratricopeptide repeat
TPR_8 PF13181 342 - 374 2.9e-08 Tetratricopeptide repeat
TPR_11 PF13414 348 - 386 1.2e-08 TPR repeat
TPR_1 PF00515 412 - 440 6.8e-08 Tetratricopeptide repeat
TPR_2 PF07719 413 - 440 1.6e-06 Tetratricopeptide repeat
TPR_9 PF13371 417 - 480 3.7e-06 Tetratricopeptide repeat
TPR_11 PF13414 418 - 457 1.7e-07 TPR repeat
TPR_11 PF13414 450 - 491 2.7e-07 TPR repeat
TPR_1 PF00515 477 - 510 2.9e-06 Tetratricopeptide repeat
TPR_11 PF13414 485 - 517 1.6e-06 TPR repeat
Glyco_transf_41 PF13844 524 - 761 1.9e-83 Glycosyl transferase family 41
Glyco_transf_41 PF13844 774 - 960 2e-68 Glycosyl transferase family 41
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 786, 849, 1257
AbsI CCTCGAGG 1 cut(s) 686
Acc16I TGCGCA 1 cut(s) 183
Acc36I ACCTGC 1 cut(s) 817
AccB7I CCANNNNNTGG 2 cut(s) 408, 1946
AccI GTMKAC 1 cut(s) 700
AccIII TCCGGA 1 cut(s) 817
AciI CCGC 5 cut(s) 38, 41, 442, 547, 1982
AclWI GGATC 9 cut(s) 433, 1004, 1310, 1685, 1888, 2297, 2384, 2397, 2707
AcoI YGGCCR 4 cut(s) 399, 939, 1418, 2682
AcsI RAATTY 2 cut(s) 709, 2351
AcuI CTGAAG 4 cut(s) 578, 1437, 1626, 1998
AcyI GRCGYC 2 cut(s) 44, 618
AfaI GTAC 7 cut(s) 209, 542, 946, 1969, 2381, 2433, 2491
AfiI CCNNNNNNNGG 7 cut(s) 40, 295, 408, 748, 1143, 1946, 2471
AflIII ACRYGT 2 cut(s) 1474, 2428
AjnI CCWGG 4 cut(s) 33, 2149, 2687, 2802
AjuI GAANNNNNNNTTGG 2 cut(s) 593, 625
Alw21I GWGCWC 5 cut(s) 15, 775, 1739, 1989, 2446
Alw44I GTGCAC 2 cut(s) 11, 2442
AlwI GGATC 9 cut(s) 433, 1004, 1310, 1685, 1888, 2297, 2384, 2397, 2707
Ama87I CYCGRG 2 cut(s) 686, 1142
Aor13HI TCCGGA 1 cut(s) 817
AoxI GGCC 9 cut(s) 231, 399, 739, 939, 1197, 1418, 2643, 2682, 2920
ApaLI GTGCAC 2 cut(s) 11, 2442
ApoI RAATTY 2 cut(s) 709, 2351
AseI ATTAAT 2 cut(s) 2037, 2064
Asp700I GAANNNNTTC 2 cut(s) 357, 1080
AspLEI GCGC 4 cut(s) 184, 2214, 2571, 2809
AspS9I GGNCC 3 cut(s) 1585, 2154, 2643
AsuC2I CCSGG 1 cut(s) 1753
AsuHPI GGTGA 6 cut(s) 191, 770, 2196, 2567, 2671, 2881
AsuII TTCGAA 2 cut(s) 274, 361
AvaI CYCGRG 2 cut(s) 686, 1142
AvaII GGWCC 2 cut(s) 1585, 2154
BaeGI GKGCMC 3 cut(s) 15, 898, 2446
BalI TGGCCA 3 cut(s) 401, 941, 2684
BamHI GGATCC 1 cut(s) 2389
BanII GRGCYC 2 cut(s) 55, 775
BauI CACGAG 1 cut(s) 651
Bbv12I GWGCWC 5 cut(s) 15, 775, 1739, 1989, 2446
BccI CCATC 4 cut(s) 1325, 1785, 1940, 2674
BceAI ACGGC 2 cut(s) 31, 1701
BcgI CGANNNNNNTGC 2 cut(s) 2823, 2857
BciT130I CCWGG 4 cut(s) 35, 2151, 2689, 2804
BcnI CCSGG 1 cut(s) 1753
BfaI CTAG 3 cut(s) 48, 534, 1653
BfmI CTRYAG 4 cut(s) 491, 776, 899, 2469
BfoI RGCGCY 1 cut(s) 2810
BfuAI ACCTGC 1 cut(s) 817
BlpI GCTNAGC 1 cut(s) 95
Bme1390I CCNGG 5 cut(s) 35, 1753, 2151, 2689, 2804
Bme18I GGWCC 2 cut(s) 1585, 2154
BmeT110I CYCGRG 2 cut(s) 686, 1142
BmgT120I GGNCC 3 cut(s) 1585, 2154, 2643
BmiI GGNNCC 4 cut(s) 2147, 2155, 2391, 2453
BmrFI CCNGG 5 cut(s) 35, 1753, 2151, 2689, 2804
BmrI ACTGGG 5 cut(s) 568, 1227, 1966, 2169, 2732
BmsI GCATC 6 cut(s) 169, 505, 658, 811, 1757, 1884
BmuI ACTGGG 5 cut(s) 568, 1227, 1966, 2169, 2732
BoxI GACNNNNGTC 1 cut(s) 477
BplI GAGNNNNNCTC 2 cut(s) 2186, 2218
BpmI CTGGAG 1 cut(s) 2786
Bpu10I CCTNAGC 3 cut(s) 81, 2505, 2917
Bpu1102I GCTNAGC 1 cut(s) 95
Bpu14I TTCGAA 2 cut(s) 274, 361
BpuEI CTTGAG 4 cut(s) 852, 1954, 2693, 2807
BpuMI CCSGG 1 cut(s) 1753
BsaAI YACGTR 2 cut(s) 698, 948
BsaBI GATNNNNATC 1 cut(s) 825
BsaHI GRCGYC 2 cut(s) 44, 618
BsaI GGTCTC 1 cut(s) 2342
BsaJI CCNNGG 9 cut(s) 33, 234, 631, 835, 921, 1141, 2149, 2150, 2688
BsaWI WCCGGW 2 cut(s) 817, 1522
BsaXI ACNNNNNCTCC 4 cut(s) 1951, 1981, 2436, 2466
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 295, 408, 748, 1143, 1946, 2471
Bse118I RCCGGY 2 cut(s) 2624, 2645
Bse1I ACTGG 8 cut(s) 574, 942, 972, 1222, 1972, 2164, 2722, 2727
Bse3DI GCAATG 4 cut(s) 999, 2254, 2617, 2911
Bse8I GATNNNNATC 1 cut(s) 825
BseAI TCCGGA 1 cut(s) 817
BseBI CCWGG 4 cut(s) 35, 2151, 2689, 2804
BseDI CCNNGG 9 cut(s) 33, 234, 631, 835, 921, 1141, 2149, 2150, 2688
BseGI GGATG 9 cut(s) 178, 184, 826, 1120, 1748, 1777, 1899, 2049, 2299
BseJI GATNNNNATC 1 cut(s) 825
BseLI CCNNNNNNNGG 7 cut(s) 40, 295, 408, 748, 1143, 1946, 2471
BseMI GCAATG 4 cut(s) 999, 2254, 2617, 2911
BseMII CTCAG 9 cut(s) 68, 72, 109, 372, 2223, 2470, 2519, 2931, 2940
BseNI ACTGG 8 cut(s) 574, 942, 972, 1222, 1972, 2164, 2722, 2727
BseRI GAGGAG 2 cut(s) 2444, 2744
BseSI GKGCMC 3 cut(s) 15, 898, 2446
BseYI CCCAGC 3 cut(s) 2464, 2865, 2931
BsgI GTGCAG 4 cut(s) 1594, 1679, 1713, 2103
Bsh1285I CGRYCG 1 cut(s) 1523
BshFI GGCC 9 cut(s) 233, 401, 741, 941, 1199, 1420, 2645, 2684, 2922
BsiEI CGRYCG 1 cut(s) 1523
BsiHKAI GWGCWC 5 cut(s) 15, 775, 1739, 1989, 2446
BsiHKCI CYCGRG 2 cut(s) 686, 1142
BsiSI CCGG 7 cut(s) 216, 818, 1417, 1523, 1753, 2625, 2646
BslFI GGGAC 2 cut(s) 2167, 2913
BslI CCNNNNNNNGG 7 cut(s) 40, 295, 408, 748, 1143, 1946, 2471
BsmFI GGGAC 2 cut(s) 2167, 2913
BsnI GGCC 9 cut(s) 233, 401, 741, 941, 1199, 1420, 2645, 2684, 2922
Bso31I GGTCTC 1 cut(s) 2342
BsoBI CYCGRG 2 cut(s) 686, 1142
Bsp119I TTCGAA 2 cut(s) 274, 361
Bsp1286I GDGCHC 7 cut(s) 15, 55, 775, 898, 1739, 1989, 2446
Bsp13I TCCGGA 1 cut(s) 817
Bsp1407I TGTACA 2 cut(s) 207, 2379
Bsp1720I GCTNAGC 1 cut(s) 95
Bsp19I CCATGG 1 cut(s) 921
BspACI CCGC 5 cut(s) 38, 41, 442, 547, 1982
BspANI GGCC 9 cut(s) 233, 401, 741, 941, 1199, 1420, 2645, 2684, 2922
BspCNI CTCAG 9 cut(s) 67, 73, 108, 373, 2224, 2469, 2518, 2930, 2941
BspEI TCCGGA 1 cut(s) 817
BspHI TCATGA 1 cut(s) 127
BspLI GGNNCC 4 cut(s) 2147, 2155, 2391, 2453
BspMAI CTGCAG 4 cut(s) 495, 780, 903, 2473
BspMI ACCTGC 1 cut(s) 817
BspPI GGATC 9 cut(s) 433, 1004, 1310, 1685, 1888, 2297, 2384, 2397, 2707
BspT104I TTCGAA 2 cut(s) 274, 361
BspTNI GGTCTC 1 cut(s) 2342
BsrDI GCAATG 4 cut(s) 999, 2254, 2617, 2911
BsrFI RCCGGY 2 cut(s) 2624, 2645
BsrGI TGTACA 2 cut(s) 207, 2379
BsrI ACTGG 8 cut(s) 574, 942, 972, 1222, 1972, 2164, 2722, 2727
BssAI RCCGGY 2 cut(s) 2624, 2645
BssECI CCNNGG 9 cut(s) 33, 234, 631, 835, 921, 1141, 2149, 2150, 2688
BssNAI GTATAC 1 cut(s) 701
BssNI GRCGYC 2 cut(s) 44, 618
BssSI CACGAG 1 cut(s) 651
BssT1I CCWWGG 4 cut(s) 234, 631, 835, 921
Bst1107I GTATAC 1 cut(s) 701
Bst2BI CACGAG 1 cut(s) 651
Bst2UI CCWGG 4 cut(s) 35, 2151, 2689, 2804
Bst4CI ACNGT 7 cut(s) 10, 677, 1210, 1566, 1589, 1734, 2441
Bst6I CTCTTC 2 cut(s) 558, 2757
BstACI GRCGYC 2 cut(s) 44, 618
BstAUI TGTACA 2 cut(s) 207, 2379
BstBAI YACGTR 2 cut(s) 698, 948
BstBI TTCGAA 2 cut(s) 274, 361
BstC8I GCNNGC 8 cut(s) 739, 894, 996, 1701, 2118, 2473, 2517, 2924
BstDSI CCRYGG 1 cut(s) 921
BstEII GGTNACC 2 cut(s) 1853, 2659
BstF5I GGATG 9 cut(s) 178, 184, 826, 1120, 1748, 1777, 1899, 2049, 2299
BstH2I RGCGCY 1 cut(s) 2810
BstHHI GCGC 4 cut(s) 184, 2214, 2571, 2809
BstMCI CGRYCG 1 cut(s) 1523
BstMWI GCNNNNNNNGC 9 cut(s) 50, 91, 188, 898, 1181, 1448, 1657, 2806, 2932
BstNI CCWGG 4 cut(s) 35, 2151, 2689, 2804
BstNSI RCATGY 3 cut(s) 547, 1406, 1478
BstPAI GACNNNNGTC 1 cut(s) 477
BstPI GGTNACC 2 cut(s) 1853, 2659
BstSCI CCNGG 5 cut(s) 33, 1751, 2149, 2687, 2802
BstSFI CTRYAG 4 cut(s) 491, 776, 899, 2469
BstSLI GKGCMC 3 cut(s) 15, 898, 2446
BstSNI TACGTA 2 cut(s) 698, 948
BstX2I RGATCY 4 cut(s) 1880, 2302, 2389, 2699
BstXI CCANNNNNNTGG 1 cut(s) 2722
BstYI RGATCY 4 cut(s) 1880, 2302, 2389, 2699
BstZ17I GTATAC 1 cut(s) 701
BsuRI GGCC 9 cut(s) 233, 401, 741, 941, 1199, 1420, 2645, 2684, 2922
BtgI CCRYGG 1 cut(s) 921
BtsCI GGATG 9 cut(s) 178, 184, 826, 1120, 1748, 1777, 1899, 2049, 2299
BtsI GCAGTG 2 cut(s) 1849, 2578
BtsIMutI CAGTG 9 cut(s) 581, 1571, 1739, 1849, 2157, 2187, 2446, 2578, 2715
BveI ACCTGC 1 cut(s) 817
Cac8I GCNNGC 8 cut(s) 739, 894, 996, 1701, 2118, 2473, 2517, 2924
CciI TCATGA 1 cut(s) 127
CfoI GCGC 4 cut(s) 184, 2214, 2571, 2809
Cfr10I RCCGGY 2 cut(s) 2624, 2645
Cfr13I GGNCC 3 cut(s) 1585, 2154, 2643
CseI GACGC 4 cut(s) 33, 626, 1289, 2915
Csp6I GTAC 7 cut(s) 208, 541, 945, 1968, 2380, 2432, 2490
CspCI CAANNNNNGTGG 4 cut(s) 1450, 1485, 2674, 2709
CviQI GTAC 7 cut(s) 208, 541, 945, 1968, 2380, 2432, 2490
DraI TTTAAA 1 cut(s) 2941
EaeI YGGCCR 4 cut(s) 399, 939, 1418, 2682
Eam1104I CTCTTC 2 cut(s) 558, 2757
EarI CTCTTC 2 cut(s) 558, 2757
Ecl136II GAGCTC 1 cut(s) 773
Eco105I TACGTA 2 cut(s) 698, 948
Eco130I CCWWGG 4 cut(s) 234, 631, 835, 921
Eco147I AGGCCT 1 cut(s) 233
Eco24I GRGCYC 2 cut(s) 55, 775
Eco31I GGTCTC 1 cut(s) 2342
Eco47I GGWCC 2 cut(s) 1585, 2154
Eco53kI GAGCTC 1 cut(s) 773
Eco57I CTGAAG 4 cut(s) 578, 1437, 1626, 1998
Eco88I CYCGRG 2 cut(s) 686, 1142
Eco91I GGTNACC 2 cut(s) 1853, 2659
EcoICRI GAGCTC 1 cut(s) 773
EcoO65I GGTNACC 2 cut(s) 1853, 2659
EcoRII CCWGG 4 cut(s) 33, 2149, 2687, 2802
EcoT14I CCWWGG 4 cut(s) 234, 631, 835, 921
EcoT22I ATGCAT 2 cut(s) 520, 673
EcoT38I GRGCYC 2 cut(s) 55, 775
ErhI CCWWGG 4 cut(s) 234, 631, 835, 921
FalI AAGNNNNNCTT 4 cut(s) 342, 374, 543, 575
FaqI GGGAC 2 cut(s) 2167, 2913
FauNDI CATATG 1 cut(s) 2494
FblI GTMKAC 1 cut(s) 700
FokI GGATG 9 cut(s) 185, 191, 833, 1107, 1735, 1764, 1906, 2036, 2306
FriOI GRGCYC 2 cut(s) 55, 775
FspAI RTGCGCAY 1 cut(s) 183
FspBI CTAG 3 cut(s) 48, 534, 1653
FspI TGCGCA 1 cut(s) 183
GlaI GCGC 4 cut(s) 183, 2213, 2570, 2808
GsaI CCCAGC 3 cut(s) 2468, 2869, 2935
GsuI CTGGAG 1 cut(s) 2786
HaeII RGCGCY 1 cut(s) 2810
HaeIII GGCC 9 cut(s) 233, 401, 741, 941, 1199, 1420, 2645, 2684, 2922
HapII CCGG 7 cut(s) 216, 818, 1417, 1523, 1753, 2625, 2646
HgaI GACGC 4 cut(s) 33, 626, 1289, 2915
HhaI GCGC 4 cut(s) 184, 2214, 2571, 2809
Hin1I GRCGYC 2 cut(s) 44, 618
Hin6I GCGC 4 cut(s) 182, 2212, 2569, 2807
HinP1I GCGC 4 cut(s) 182, 2212, 2569, 2807
HincII GTYRAC 3 cut(s) 616, 965, 1206
HindII GTYRAC 3 cut(s) 616, 965, 1206
HindIII AAGCTT 1 cut(s) 2237
HpaII CCGG 7 cut(s) 216, 818, 1417, 1523, 1753, 2625, 2646
HphI GGTGA 6 cut(s) 191, 770, 2196, 2567, 2671, 2881
Hpy188I TCNGA 8 cut(s) 142, 1978, 2017, 2233, 2329, 2459, 2834, 2962
HpyCH4III ACNGT 7 cut(s) 10, 677, 1210, 1566, 1589, 1734, 2441
HpyCH4IV ACGT 5 cut(s) 697, 947, 1202, 1559, 2428
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 91, 188, 898, 1181, 1448, 1657, 2806, 2932
HpySE526I ACGT 5 cut(s) 697, 947, 1202, 1559, 2428
Hsp92I GRCGYC 2 cut(s) 44, 618
HspAI GCGC 4 cut(s) 182, 2212, 2569, 2807
Kpn2I TCCGGA 1 cut(s) 817
LmnI GCTCC 7 cut(s) 238, 1234, 1742, 1789, 1984, 2457, 2805
LweI GCATC 6 cut(s) 169, 505, 658, 811, 1757, 1884
MaeI CTAG 3 cut(s) 48, 534, 1653
MaeII ACGT 5 cut(s) 697, 947, 1202, 1559, 2428
MaeIII GTNAC 9 cut(s) 428, 1043, 1210, 1560, 1844, 1853, 1866, 2185, 2659
MboII GAAGA 8 cut(s) 81, 362, 575, 1298, 1508, 2240, 2689, 2774
MfeI CAATTG 1 cut(s) 876
MflI RGATCY 4 cut(s) 1880, 2302, 2389, 2699
MhlI GDGCHC 7 cut(s) 15, 55, 775, 898, 1739, 1989, 2446
MlsI TGGCCA 3 cut(s) 401, 941, 2684
MluNI TGGCCA 3 cut(s) 401, 941, 2684
MlyI GAGTC 4 cut(s) 77, 761, 1945, 2478
MmeI TCCRAC 1 cut(s) 1810
Mox20I TGGCCA 3 cut(s) 401, 941, 2684
Mph1103I ATGCAT 2 cut(s) 520, 673
MroI TCCGGA 1 cut(s) 817
MroXI GAANNNNTTC 2 cut(s) 357, 1080
MscI TGGCCA 3 cut(s) 401, 941, 2684
Msp20I TGGCCA 3 cut(s) 401, 941, 2684
MspA1I CMGCKG 4 cut(s) 316, 598, 1328, 2468
MspI CCGG 7 cut(s) 216, 818, 1417, 1523, 1753, 2625, 2646
MspR9I CCNGG 5 cut(s) 35, 1753, 2151, 2689, 2804
MunI CAATTG 1 cut(s) 876
MvaI CCWGG 4 cut(s) 35, 2151, 2689, 2804
MwoI GCNNNNNNNGC 9 cut(s) 50, 91, 188, 898, 1181, 1448, 1657, 2806, 2932
NciI CCSGG 1 cut(s) 1753
NcoI CCATGG 1 cut(s) 921
NdeI CATATG 1 cut(s) 2494
NlaIV GGNNCC 4 cut(s) 2147, 2155, 2391, 2453
NmuCI GTSAC 6 cut(s) 428, 1210, 1844, 1866, 2185, 2659
NsbI TGCGCA 1 cut(s) 183
NsiI ATGCAT 2 cut(s) 520, 673
NspI RCATGY 3 cut(s) 547, 1406, 1478
NspV TTCGAA 2 cut(s) 274, 361
PacI TTAATTAA 1 cut(s) 2064
PaeR7I CTCGAG 1 cut(s) 686
PagI TCATGA 1 cut(s) 127
PasI CCCWGGG 1 cut(s) 2150
PceI AGGCCT 1 cut(s) 233
PciI ACATGT 1 cut(s) 1474
PdmI GAANNNNTTC 2 cut(s) 357, 1080
PfeI GAWTC 9 cut(s) 122, 137, 265, 601, 2460, 2788, 2875, 2905, 2957
PflMI CCANNNNNTGG 2 cut(s) 408, 1946
PleI GAGTC 4 cut(s) 76, 760, 1944, 2478
PpsI GAGTC 4 cut(s) 76, 760, 1944, 2478
Ppu21I YACGTR 2 cut(s) 698, 948
PscI ACATGT 1 cut(s) 1474
PshAI GACNNNNGTC 1 cut(s) 477
PshBI ATTAAT 2 cut(s) 2037, 2064
PsiI TTATAA 3 cut(s) 786, 849, 1257
Psp124BI GAGCTC 1 cut(s) 775
Psp6I CCWGG 4 cut(s) 33, 2149, 2687, 2802
PspEI GGTNACC 2 cut(s) 1853, 2659
PspFI CCCAGC 3 cut(s) 2464, 2865, 2931
PspGI CCWGG 4 cut(s) 33, 2149, 2687, 2802
PspN4I GGNNCC 4 cut(s) 2147, 2155, 2391, 2453
PspPI GGNCC 3 cut(s) 1585, 2154, 2643
PspXI VCTCGAGB 1 cut(s) 686
PstI CTGCAG 4 cut(s) 495, 780, 903, 2473
PsuI RGATCY 4 cut(s) 1880, 2302, 2389, 2699
PvuII CAGCTG 4 cut(s) 316, 598, 1328, 2468
RsaI GTAC 7 cut(s) 209, 542, 946, 1969, 2381, 2433, 2491
RsaNI GTAC 7 cut(s) 208, 541, 945, 1968, 2380, 2432, 2490
SacI GAGCTC 1 cut(s) 775
Sau96I GGNCC 3 cut(s) 1585, 2154, 2643
SchI GAGTC 4 cut(s) 77, 761, 1945, 2478
ScrFI CCNGG 5 cut(s) 35, 1753, 2151, 2689, 2804
SduI GDGCHC 7 cut(s) 15, 55, 775, 898, 1739, 1989, 2446
SfaNI GCATC 6 cut(s) 169, 505, 658, 811, 1757, 1884
SfcI CTRYAG 4 cut(s) 491, 776, 899, 2469
Sfr274I CTCGAG 1 cut(s) 686
SfuI TTCGAA 2 cut(s) 274, 361
SinI GGWCC 2 cut(s) 1585, 2154
SlaI CTCGAG 1 cut(s) 686
SmlI CTYRAG 5 cut(s) 686, 867, 1933, 2672, 2822
SmoI CTYRAG 5 cut(s) 686, 867, 1933, 2672, 2822
SnaBI TACGTA 2 cut(s) 698, 948
SseBI AGGCCT 1 cut(s) 233
SsiI CCGC 5 cut(s) 38, 41, 442, 547, 1982
SspI AATATT 4 cut(s) 1150, 2103, 2400, 2419
SspMI CTAG 3 cut(s) 48, 534, 1653
SstI GAGCTC 1 cut(s) 775
StuI AGGCCT 1 cut(s) 233
StyD4I CCNGG 5 cut(s) 33, 1751, 2149, 2687, 2802
StyI CCWWGG 4 cut(s) 234, 631, 835, 921
TaaI ACNGT 7 cut(s) 10, 677, 1210, 1566, 1589, 1734, 2441
TaiI ACGT 5 cut(s) 700, 950, 1205, 1562, 2431
TaqI TCGA 6 cut(s) 135, 274, 361, 499, 687, 1519
TatI WGTACW 2 cut(s) 207, 2379
TauI GCSGC 2 cut(s) 41, 44
TfiI GAWTC 9 cut(s) 122, 137, 265, 601, 2460, 2788, 2875, 2905, 2957
TscAI CASTG 9 cut(s) 581, 1571, 1739, 1849, 2164, 2194, 2446, 2578, 2722
TseFI GTSAC 6 cut(s) 428, 1210, 1844, 1866, 2185, 2659
Tsp45I GTSAC 6 cut(s) 428, 1210, 1844, 1866, 2185, 2659
TspGWI ACGGA 2 cut(s) 1967, 2477
TspRI CASTG 9 cut(s) 581, 1571, 1739, 1849, 2164, 2194, 2446, 2578, 2722
Van91I CCANNNNNTGG 2 cut(s) 408, 1946
VneI GTGCAC 2 cut(s) 11, 2442
VpaK11BI GGWCC 2 cut(s) 1585, 2154
VspI ATTAAT 2 cut(s) 2037, 2064
XapI RAATTY 2 cut(s) 709, 2351
XceI RCATGY 3 cut(s) 547, 1406, 1478
XcmI CCANNNNNNNNNTGG 1 cut(s) 629
XhoI CTCGAG 1 cut(s) 686
XmiI GTMKAC 1 cut(s) 700
XmnI GAANNNNTTC 2 cut(s) 357, 1080
XspI CTAG 3 cut(s) 48, 534, 1653
Zsp2I ATGCAT 2 cut(s) 520, 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.