Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0010024

Physical Location & Seq

Genomic Coordinates Forward (+)

22312006 .. 22319479

Gene Structure 7474 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g20880.19

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2748 bp

ATGTACAAGGCTGGAAACTATAAGGAGGCACTAGAGCATAGCAAAATCGTGTATGAGAAAAACCCGATTCGCACCGACAATCTCCTGCTTTTGGGTGCAATCTATTATCAGTTGCATGACTTTGATATGTGTATCGCCAAAAATGAAGAAGCCCTTCGAATTGAGCCCCATTTTGCTGAGTGTTATGGGAACATGGCTAATGCTTGGAAGGAAAAAGGAAATAATGACCTTGCTATTCGCTATTATTTGGTTGCCATTGAGCTTCGTCCCAACTTCTGTGATGCATGGTCAAACTTAGCTAGTGCATACATGCGGAAGGGAAGACATGAAGAAGCGGCACAGTGTTGTCGCCAGGCACTTGCATTAAATCCCCATTTGGTTGATGCCCATAGTAATCTTGGAAATCTAATGAAGGCACGGGGATTGGTGCAAGAGGCATACAGTTGCTACCTTGAGGCTATACGTATACAACCAAACTTCGCTATTGCATGGTCTAATCTTGCTGGTCTTTTCATGGAGTCTGGTGATCTTAATAGAGCCCTGCAGTACTATAAGGAGGCTGTGAAACTCAAACCTGCTTTTCCAGATGCGTATCTCAACCTTGGGAATGTTTATAAGGCTTTGGGACTGCCTCAGGAGGCAATCGTGTGTTATCAGCGTGCTCTCCAGACAAGACCCAACTATGCAATGGCTTTCGGAAATTTGGCTAGTTCGTATTATGAGCAAGGTCAACTGGATCTGGCAATCCTACATTATAAGCAAGCCATTTCCTGTGATGCAAGATTTTTGGAGGCTTACAATAATTTGGGCAATGCTCTGAAAGACATTGGCAGAGTGGATGAAGCAATTCAATGCTACAATCAATGCCTTACTTTACAACCTAACCATCCACAAGCGCTTACAAACCTTGGGAATATTTATATGGAATGGAACATGGTGGCTGCTGCTGCTCAATATTATAAGGCCACATTGACCGTAACAACTGGATTGTCTGCTCCTTTTAATAATCTTGCCATCATCTATAAGCAACAGGGGAACTATGCGGATGCAATTTCTTGCTACAATGAGGTTCTTCGCATTGATCCCTTGGCAGCTGATGGGCTTGTCAACAGGGGCAACACATACAAGGAGATTGGTAGAGTCAGTGAAGCAATTCAGGACTACATACATGCAATATCTGTCCGGCCAACTATGGCTGAAGCTCATGCAAACTTGGCTTCAGCTTACAAGGATAGTGGACATGTCGAGGCTGCTATTAAGAGCTATAGTCAGGCATTGCATCTTCGAACTGATTTTCCAGAGGCAACTTGTAATCTTTTACATACATTACAGTGTGTATGCAGTTGGGAGGATCGTGACAAAATGTTTTCTGAAGTGGAAGGCATAATCAGGAGGCAGATTAATATGTCTCTTCTGCCTAGTGTGCAACCTTTCCACGCAATAGCATATCCTATTGATCCAATTCTGGCACTTGAAATTAGTCGTAAATATGCTGCACACTGCTCCATAGTTGCATCCCGATTTGGACTTTCTCCCTTCAACCATCCTGCTCCTGTCCCCATAAGGCGTAATGGTGGACCTCAGAGACTAAGGGTTGGATATGTAAGCAGTGACTTCGGTAATCACCCTTTGTCACATCTTATGGGATCTGTGTTTGGGATGCATAACAAGGACAATGTTGAGGTTTTCTGTTATGCCTTGAGTCCAAATGATGGAACGGAATGGAGACAACGCATCCAGTCTGAAGTGGAGCACTTTACGGATGTCTCTTCTTTGTCATCAGATACGATTGCCAAAATGATTAATGAAGATAAGATACAAGTCTTAATTAACCTCAATGGCTATACAAAGGGGGCAAGAAATGAGATATTTGCTATGCAGCCAGCTCCCATTCAGGTTTCATACATGGGGTTCCCTGGTACCACGGGGGCAAATTACATCGATTATCTAGTCACTGATGAGTTCGTTTCACCTTTACGCTACGCACATATTTATTCTGAGAAAATTGTTCATCTCCCGCATTGCTACTTTGTGAATGATTATAAGCAGAAAAATCAAGATGTGTTGGATCCAAGCTGCCGGCACAAGCGATCAGATTATGGGCTGCCTGAGGATAAATTTATATTTGCATGCTTCAATCAGTTGTACAAAATGGATCCTGAAATTTTTAATACTTGGTGCAATATTCTTAAACGTGTACCCAACAGTGCACTTTGGCTCCTCAGATTCCCAGCTGCAGGCGAAACAAGACTTCGTAAATATGCTGTTGATCAAGGAGTCCAGCCAGACCAAATCATCTTCACGGATGTTGCTATGAAAGGTGAACATATCAGGCGGAGTGCGTTGGCAGATTTATTCCTTGACACGCCTTTGTGCAATGCACATACGACAGGCACGGATATTCTATGGGCAGGTCTGCCGATGGTGACCCTTCCCCTTGAAAAGATGGCTACCAGGGTTGATCGATCACTGTGTCTCGCCACTGGACTGGGAGATGAGATGATTGTTAGCAGCATGAAAGAGTATGAAGAGAAGGCCGTGTCTCTGGCGTTGAATCCTCCAAAGCTCCGTGCTCTTGCCACCAAGCTCAAGGCAGCCCGACTGACTTGTCCTCTGTTCGACACTGCACGCTGGGTGAGGAATCTGGAGAGGAGTTACTTCAAAATGTGGAATCTGCATTGCTCAGGCCAGAAGCCGCAGCATTTCAAAGTCACCGAGAACGATTTAGAGTTCCCCTACGACAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006464 GO:0006486 GO:0006493 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0016740 GO:0016757 GO:0019538 GO:0034645 GO:0036211 GO:0043170 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0070085 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00514 ko04931 map00514 map04931

Pfam Domains

Protein Families

Glyco_transf_41 TPR_1 TPR_11 TPR_2 TPR_8

Protein Analysis

916

Amino Acids

103.49

Weight (kDa)

6.74

Isoelectric Point (pI)

43.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010024)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04240 AT3G04240
fragaria_vesca	FvH4_6g01310 FvH4_6g01310 FvH4_6g01310
malus_domestica	MD04G1235300.v1.1 MD12G1253100.v1.1
prunus_persica	Prupe.6G355200_v2.0.a1 Prupe.6G355200_v2.0.a1
pyrus_communis	pycom04g20880 pycom12g23220
rosa_chinensis	RchiOBHm_Chr3g0448861
rosa_laevigata	RLG00000025870
rosa_multiflora	Rmu_sc0003116.1_g000022 Rmu_sc0027913.1_g000003
rosa_roxburghii	Rroxscaffold_6G00427070
rosa_rugosa	Rorug02G0616800
rosa_samantha	Rh3AG015100 Rh3CG013800 Rh3DG015400
rosa_wichuraiana	Rw3G001120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	615, 756, 960, 2043
AasI	GACNNNNNNGTC	1 cut(s)	2607
Acc36I	ACCTGC	2 cut(s)	583, 2402
Acc65I	GGTACC	1 cut(s)	1919
AccB1I	GGYRCC	1 cut(s)	1919
AccB7I	CCANNNNNTGG	1 cut(s)	1712
AccI	GTMKAC	1 cut(s)	466
AciI	CCGC	6 cut(s)	313, 335, 1043, 2018, 2335, 2696
AclWI	GGATC	9 cut(s)	744, 1076, 1359, 1451, 1654, 2063, 2076, 2150, 2163
AcoI	YGGCCR	1 cut(s)	1184
AcsI	RAATTY	3 cut(s)	700, 2117, 2163
AcuI	CTGAAG	4 cut(s)	1203, 1218, 1392, 1764
AfaI	GTAC	5 cut(s)	5, 548, 1921, 2147, 2199
AfeI	AGCGCT	1 cut(s)	897
AfiI	CCNNNNNNNGG	4 cut(s)	91, 1712, 2237, 2742
AflIII	ACRYGT	2 cut(s)	1240, 2194
AgsI	TTSAA	8 cut(s)	851, 1475, 1540, 2137, 2441, 2554, 2662, 2707
AjnI	CCWGG	3 cut(s)	351, 1915, 2453
AloI	GAACNNNNNNTCC	2 cut(s)	1279, 1311
Alw21I	GWGCWC	4 cut(s)	664, 1755, 2212, 2575
Alw26I	GTCTC	6 cut(s)	1413, 1579, 1720, 1771, 2480, 2547
Alw44I	GTGCAC	1 cut(s)	2208
AlwI	GGATC	9 cut(s)	744, 1076, 1359, 1451, 1654, 2063, 2076, 2150, 2163
Aor51HI	AGCGCT	1 cut(s)	897
AoxI	GGCC	4 cut(s)	963, 1184, 2535, 2686
ApaLI	GTGCAC	1 cut(s)	2208
ApoI	RAATTY	3 cut(s)	700, 2117, 2163
AseI	ATTAAT	2 cut(s)	1401, 1803
Asp700I	GAANNNNTTC	3 cut(s)	153, 846, 1152
Asp718I	GGTACC	1 cut(s)	1919
AspLEI	GCGC	1 cut(s)	898
AspS9I	GGNCC	1 cut(s)	1577
AsuHPI	GGTGA	7 cut(s)	536, 1616, 1962, 2333, 2437, 2647, 2704
AsuII	TTCGAA	2 cut(s)	157, 1285
AvaII	GGWCC	1 cut(s)	1577
AxyI	CCTNAGG	2 cut(s)	633, 2109
BaeGI	GKGCMC	1 cut(s)	2212
BamHI	GGATCC	2 cut(s)	2068, 2155
BanI	GGYRCC	1 cut(s)	1919
BanII	GRGCYC	2 cut(s)	168, 541
BarI	GAAGNNNNNNTAC	2 cut(s)	1800, 1832
BbsI	GAAGAC	1 cut(s)	328
Bbv12I	GWGCWC	4 cut(s)	664, 1755, 2212, 2575
BccI	CCATC	7 cut(s)	894, 1022, 1091, 1551, 1706, 2416, 2440
BceAI	ACGGC	1 cut(s)	2522
BcgI	CGANNNNNNTGC	2 cut(s)	1597, 1631
BciT130I	CCWGG	3 cut(s)	353, 1917, 2455
BclI	TGATCA	1 cut(s)	2269
BcoDI	GTCTC	6 cut(s)	1413, 1579, 1720, 1771, 2480, 2547
BfaI	CTAG	5 cut(s)	32, 300, 708, 1419, 1949
BfmI	CTRYAG	3 cut(s)	542, 1264, 2235
BfoI	RGCGCY	1 cut(s)	899
BfuAI	ACCTGC	2 cut(s)	583, 2402
BmcAI	AGTACT	1 cut(s)	548
Bme1390I	CCNGG	3 cut(s)	353, 1917, 2455
Bme18I	GGWCC	1 cut(s)	1577
BmgT120I	GGNCC	1 cut(s)	1577
BmiI	GGNNCC	5 cut(s)	1913, 1921, 2070, 2157, 2219
BmrFI	CCNGG	3 cut(s)	353, 1917, 2455
BmrI	ACTGGG	1 cut(s)	2498
BmsI	GCATC	9 cut(s)	271, 373, 577, 766, 1036, 1288, 1523, 1650, 1743
BmuI	ACTGGG	1 cut(s)	2498
BpiI	GAAGAC	1 cut(s)	328
BpmI	CTGGAG	2 cut(s)	650, 2666
Bpu10I	CCTNAGC	1 cut(s)	2683
Bpu14I	TTCGAA	2 cut(s)	157, 1285
BpuEI	CTTGAG	3 cut(s)	473, 1720, 2573
Bsa29I	ATCGAT	2 cut(s)	1941, 2464
BsaAI	YACGTR	1 cut(s)	464
BsaBI	GATNNNNATC	1 cut(s)	591
BsaJI	CCNNGG	6 cut(s)	601, 907, 1086, 1915, 1923, 2454
BsaXI	ACNNNNNCTCC	2 cut(s)	2202, 2232
Bsc4I	CCNNNNNNNGG	4 cut(s)	91, 1712, 2237, 2742
Bse118I	RCCGGY	1 cut(s)	2079
Bse1I	ACTGG	5 cut(s)	738, 988, 1738, 2488, 2493
Bse21I	CCTNAGG	2 cut(s)	633, 2109
Bse3DI	GCAATG	6 cut(s)	693, 817, 1274, 2020, 2383, 2677
Bse8I	GATNNNNATC	1 cut(s)	591
BseBI	CCWGG	3 cut(s)	353, 1917, 2455
BseCI	ATCGAT	2 cut(s)	1941, 2464
BseDI	CCNNGG	6 cut(s)	601, 907, 1086, 1915, 1923, 2454
BseGI	GGATG	9 cut(s)	844, 886, 1051, 1514, 1543, 1665, 1734, 1768, 2311
BseJI	GATNNNNATC	1 cut(s)	591
BseLI	CCNNNNNNNGG	4 cut(s)	91, 1712, 2237, 2742
BseMI	GCAATG	6 cut(s)	693, 817, 1274, 2020, 2383, 2677
BseMII	CTCAG	7 cut(s)	168, 647, 1595, 1989, 2100, 2236, 2697
BseNI	ACTGG	5 cut(s)	738, 988, 1738, 2488, 2493
BseRI	GAGGAG	2 cut(s)	2210, 2665
BseSI	GKGCMC	1 cut(s)	2212
BseYI	CCCAGC	2 cut(s)	2230, 2631
BsgI	GTGCAG	2 cut(s)	1479, 2610
BshFI	GGCC	4 cut(s)	965, 1186, 2537, 2688
BshNI	GGYRCC	1 cut(s)	1919
BshVI	ATCGAT	2 cut(s)	1941, 2464
BsiHKAI	GWGCWC	4 cut(s)	664, 1755, 2212, 2575
BsiSI	CCGG	2 cut(s)	1183, 2080
BslFI	GGGAC	3 cut(s)	252, 639, 1541
BslI	CCNNNNNNNGG	4 cut(s)	91, 1712, 2237, 2742
BsmAI	GTCTC	6 cut(s)	1413, 1579, 1720, 1771, 2480, 2547
BsmFI	GGGAC	3 cut(s)	252, 639, 1541
BsnI	GGCC	4 cut(s)	965, 1186, 2537, 2688
Bsp119I	TTCGAA	2 cut(s)	157, 1285
Bsp1286I	GDGCHC	6 cut(s)	168, 541, 664, 1755, 2212, 2575
Bsp1407I	TGTACA	2 cut(s)	3, 2145
BspACI	CCGC	6 cut(s)	313, 335, 1043, 2018, 2335, 2696
BspANI	GGCC	4 cut(s)	965, 1186, 2537, 2688
BspCNI	CTCAG	7 cut(s)	169, 646, 1594, 1990, 2101, 2235, 2696
BspDI	ATCGAT	2 cut(s)	1941, 2464
BspLI	GGNNCC	5 cut(s)	1913, 1921, 2070, 2157, 2219
BspMAI	CTGCAG	2 cut(s)	546, 2239
BspMI	ACCTGC	2 cut(s)	583, 2402
BspPI	GGATC	9 cut(s)	744, 1076, 1359, 1451, 1654, 2063, 2076, 2150, 2163
BspT104I	TTCGAA	2 cut(s)	157, 1285
BspT107I	GGYRCC	1 cut(s)	1919
BsrDI	GCAATG	6 cut(s)	693, 817, 1274, 2020, 2383, 2677
BsrFI	RCCGGY	1 cut(s)	2079
BsrGI	TGTACA	2 cut(s)	3, 2145
BsrI	ACTGG	5 cut(s)	738, 988, 1738, 2488, 2493
BssAI	RCCGGY	1 cut(s)	2079
BssECI	CCNNGG	6 cut(s)	601, 907, 1086, 1915, 1923, 2454
BssNAI	GTATAC	1 cut(s)	467
BssT1I	CCWWGG	3 cut(s)	601, 907, 1086
Bst1107I	GTATAC	1 cut(s)	467
Bst2UI	CCWGG	3 cut(s)	353, 1917, 2455
Bst4CI	ACNGT	6 cut(s)	342, 443, 976, 1332, 2207, 2472
Bst6I	CTCTTC	3 cut(s)	1416, 1774, 2523
BstAUI	TGTACA	2 cut(s)	3, 2145
BstBAI	YACGTR	1 cut(s)	464
BstBI	TTCGAA	2 cut(s)	157, 1285
BstC8I	GCNNGC	7 cut(s)	660, 762, 1884, 2081, 2131, 2239, 2629
BstDEI	CTNAG	9 cut(s)	177, 295, 633, 1581, 1589, 1998, 2109, 2222, 2683
BstDSI	CCRYGG	1 cut(s)	1923
BstEII	GGTNACC	1 cut(s)	2425
BstENI	CCTNNNNNAGG	1 cut(s)	2740
BstF5I	GGATG	9 cut(s)	844, 886, 1051, 1514, 1543, 1665, 1734, 1768, 2311
BstH2I	RGCGCY	1 cut(s)	899
BstHHI	GCGC	1 cut(s)	898
BstMAI	GTCTC	6 cut(s)	1413, 1579, 1720, 1771, 2480, 2547
BstMWI	GCNNNNNNNGC	3 cut(s)	947, 1214, 1423
BstNI	CCWGG	3 cut(s)	353, 1917, 2455
BstNSI	RCATGY	4 cut(s)	313, 1172, 1244, 2133
BstPI	GGTNACC	1 cut(s)	2425
BstSCI	CCNGG	3 cut(s)	351, 1915, 2453
BstSFI	CTRYAG	3 cut(s)	542, 1264, 2235
BstSLI	GKGCMC	1 cut(s)	2212
BstSNI	TACGTA	1 cut(s)	464
BstV2I	GAAGAC	1 cut(s)	328
BstX2I	RGATCY	4 cut(s)	736, 1646, 2068, 2155
BstXI	CCANNNNNNTGG	1 cut(s)	2488
BstYI	RGATCY	4 cut(s)	736, 1646, 2068, 2155
BstZ17I	GTATAC	1 cut(s)	467
Bsu15I	ATCGAT	2 cut(s)	1941, 2464
Bsu36I	CCTNAGG	2 cut(s)	633, 2109
BsuRI	GGCC	4 cut(s)	965, 1186, 2537, 2688
BsuTUI	ATCGAT	2 cut(s)	1941, 2464
BtgI	CCRYGG	1 cut(s)	1923
BtsCI	GGATG	9 cut(s)	844, 886, 1051, 1514, 1543, 1665, 1734, 1768, 2311
BtsI	GCAGTG	3 cut(s)	1498, 1615, 2622
BveI	ACCTGC	2 cut(s)	583, 2402
Cac8I	GCNNGC	7 cut(s)	660, 762, 1884, 2081, 2131, 2239, 2629
CfoI	GCGC	1 cut(s)	898
Cfr10I	RCCGGY	1 cut(s)	2079
Cfr13I	GGNCC	1 cut(s)	1577
ClaI	ATCGAT	2 cut(s)	1941, 2464
Csp6I	GTAC	5 cut(s)	4, 547, 1920, 2146, 2198
CspCI	CAANNNNNGTGG	2 cut(s)	1216, 1251
CviQI	GTAC	5 cut(s)	4, 547, 1920, 2146, 2198
DdeI	CTNAG	9 cut(s)	177, 295, 633, 1581, 1589, 1998, 2109, 2222, 2683
DrdI	GACNNNNNNGTC	1 cut(s)	2607
DseDI	GACNNNNNNGTC	1 cut(s)	2607
EaeI	YGGCCR	1 cut(s)	1184
Eam1104I	CTCTTC	3 cut(s)	1416, 1774, 2523
EarI	CTCTTC	3 cut(s)	1416, 1774, 2523
EciI	GGCGGA	1 cut(s)	2350
Eco105I	TACGTA	1 cut(s)	464
Eco130I	CCWWGG	3 cut(s)	601, 907, 1086
Eco24I	GRGCYC	2 cut(s)	168, 541
Eco47I	GGWCC	1 cut(s)	1577
Eco47III	AGCGCT	1 cut(s)	897
Eco57I	CTGAAG	4 cut(s)	1203, 1218, 1392, 1764
Eco81I	CCTNAGG	2 cut(s)	633, 2109
Eco91I	GGTNACC	1 cut(s)	2425
EcoNI	CCTNNNNNAGG	1 cut(s)	2740
EcoO65I	GGTNACC	1 cut(s)	2425
EcoRII	CCWGG	3 cut(s)	351, 1915, 2453
EcoT14I	CCWWGG	3 cut(s)	601, 907, 1086
EcoT22I	ATGCAT	2 cut(s)	286, 1665
EcoT38I	GRGCYC	2 cut(s)	168, 541
ErhI	CCWWGG	3 cut(s)	601, 907, 1086
FalI	AAGNNNNNCTT	2 cut(s)	138, 170
FaqI	GGGAC	3 cut(s)	252, 639, 1541
FauI	CCCGC	1 cut(s)	2025
FbaI	TGATCA	1 cut(s)	2269
FblI	GTMKAC	1 cut(s)	466
FokI	GGATG	9 cut(s)	851, 873, 1058, 1501, 1530, 1672, 1721, 1775, 2318
FriOI	GRGCYC	2 cut(s)	168, 541
FspBI	CTAG	5 cut(s)	32, 300, 708, 1419, 1949
GlaI	GCGC	1 cut(s)	897
GsaI	CCCAGC	2 cut(s)	2234, 2635
GsuI	CTGGAG	2 cut(s)	650, 2666
HaeII	RGCGCY	1 cut(s)	899
HaeIII	GGCC	4 cut(s)	965, 1186, 2537, 2688
HapII	CCGG	2 cut(s)	1183, 2080
HhaI	GCGC	1 cut(s)	898
Hin6I	GCGC	1 cut(s)	896
HinP1I	GCGC	1 cut(s)	896
HincII	GTYRAC	2 cut(s)	731, 1108
HindII	GTYRAC	2 cut(s)	731, 1108
HinfI	GANTC	9 cut(s)	67, 518, 1140, 1702, 2226, 2277, 2554, 2641, 2671
HpaII	CCGG	2 cut(s)	1183, 2080
HphI	GGTGA	7 cut(s)	536, 1616, 1962, 2333, 2437, 2647, 2704
Hpy166II	GTNNAC	8 cut(s)	467, 731, 1108, 1238, 1577, 2198, 2210, 2324
Hpy188I	TCNGA	9 cut(s)	698, 819, 1372, 1584, 1744, 1783, 1999, 2095, 2225
Hpy8I	GTNNAC	8 cut(s)	467, 731, 1108, 1238, 1577, 2198, 2210, 2324
HpyAV	CCTTC	8 cut(s)	164, 202, 310, 406, 1373, 1546, 2441, 2527
HpyCH4III	ACNGT	6 cut(s)	342, 443, 976, 1332, 2207, 2472
HpyCH4IV	ACGT	2 cut(s)	463, 2194
HpyF10VI	GCNNNNNNNGC	3 cut(s)	947, 1214, 1423
HpyF3I	CTNAG	9 cut(s)	177, 295, 633, 1581, 1589, 1998, 2109, 2222, 2683
HpySE526I	ACGT	2 cut(s)	463, 2194
HspAI	GCGC	1 cut(s)	896
KpnI	GGTACC	1 cut(s)	1923
KroI	GCCGGC	1 cut(s)	2079
KroNI	GCCGGC	1 cut(s)	2081
Ksp22I	TGATCA	1 cut(s)	2269
LmnI	GCTCC	7 cut(s)	1000, 1508, 1555, 1750, 1891, 2223, 2571
LweI	GCATC	9 cut(s)	271, 373, 577, 766, 1036, 1288, 1523, 1650, 1743
MaeI	CTAG	5 cut(s)	32, 300, 708, 1419, 1949
MaeII	ACGT	2 cut(s)	463, 2194
MaeIII	GTNAC	8 cut(s)	976, 1355, 1610, 1632, 1951, 2425, 2654, 2710
MflI	RGATCY	4 cut(s)	736, 1646, 2068, 2155
MhlI	GDGCHC	6 cut(s)	168, 541, 664, 1755, 2212, 2575
MlyI	GAGTC	4 cut(s)	527, 1149, 1711, 2286
MmeI	TCCRAC	2 cut(s)	1576, 2046
Mph1103I	ATGCAT	2 cut(s)	286, 1665
MroNI	GCCGGC	1 cut(s)	2079
MroXI	GAANNNNTTC	3 cut(s)	153, 846, 1152
MslI	CAYNNNNRTG	1 cut(s)	1330
MspA1I	CMGCKG	2 cut(s)	1094, 2234
MspI	CCGG	2 cut(s)	1183, 2080
MspR9I	CCNGG	3 cut(s)	353, 1917, 2455
MvaI	CCWGG	3 cut(s)	353, 1917, 2455
MwoI	GCNNNNNNNGC	3 cut(s)	947, 1214, 1423
NaeI	GCCGGC	1 cut(s)	2081
NgoMIV	GCCGGC	1 cut(s)	2079
NlaIV	GGNNCC	5 cut(s)	1913, 1921, 2070, 2157, 2219
NmuCI	GTSAC	6 cut(s)	1355, 1610, 1632, 1951, 2425, 2710
NsiI	ATGCAT	2 cut(s)	286, 1665
NspI	RCATGY	4 cut(s)	313, 1172, 1244, 2133
NspV	TTCGAA	2 cut(s)	157, 1285
PacI	TTAATTAA	1 cut(s)	1830
PaeI	GCATGC	1 cut(s)	2133
PciI	ACATGT	1 cut(s)	1240
PdiI	GCCGGC	1 cut(s)	2081
PdmI	GAANNNNTTC	3 cut(s)	153, 846, 1152
PfeI	GAWTC	5 cut(s)	67, 2226, 2554, 2641, 2671
PflMI	CCANNNNNTGG	1 cut(s)	1712
PleI	GAGTC	4 cut(s)	526, 1148, 1710, 2285
PpsI	GAGTC	4 cut(s)	526, 1148, 1710, 2285
Ppu21I	YACGTR	1 cut(s)	464
PscI	ACATGT	1 cut(s)	1240
PshBI	ATTAAT	2 cut(s)	1401, 1803
PsiI	TTATAA	4 cut(s)	615, 756, 960, 2043
Psp6I	CCWGG	3 cut(s)	351, 1915, 2453
PspEI	GGTNACC	1 cut(s)	2425
PspFI	CCCAGC	2 cut(s)	2230, 2631
PspGI	CCWGG	3 cut(s)	351, 1915, 2453
PspN4I	GGNNCC	5 cut(s)	1913, 1921, 2070, 2157, 2219
PspPI	GGNCC	1 cut(s)	1577
PstI	CTGCAG	2 cut(s)	546, 2239
PsuI	RGATCY	4 cut(s)	736, 1646, 2068, 2155
PvuII	CAGCTG	2 cut(s)	1094, 2234
RsaI	GTAC	5 cut(s)	5, 548, 1921, 2147, 2199
RsaNI	GTAC	5 cut(s)	4, 547, 1920, 2146, 2198
RseI	CAYNNNNRTG	1 cut(s)	1330
Sau96I	GGNCC	1 cut(s)	1577
ScaI	AGTACT	1 cut(s)	548
SchI	GAGTC	4 cut(s)	527, 1149, 1711, 2286
ScrFI	CCNGG	3 cut(s)	353, 1917, 2455
SduI	GDGCHC	6 cut(s)	168, 541, 664, 1755, 2212, 2575
SfaNI	GCATC	9 cut(s)	271, 373, 577, 766, 1036, 1288, 1523, 1650, 1743
SfcI	CTRYAG	3 cut(s)	542, 1264, 2235
SfuI	TTCGAA	2 cut(s)	157, 1285
SinI	GGWCC	1 cut(s)	1577
SmiMI	CAYNNNNRTG	1 cut(s)	1330
SmlI	CTYRAG	3 cut(s)	452, 1699, 2588
SmoI	CTYRAG	3 cut(s)	452, 1699, 2588
SnaBI	TACGTA	1 cut(s)	464
SphI	GCATGC	1 cut(s)	2133
SsiI	CCGC	6 cut(s)	313, 335, 1043, 2018, 2335, 2696
SspI	AATATT	3 cut(s)	916, 956, 2185
SspMI	CTAG	5 cut(s)	32, 300, 708, 1419, 1949
StyD4I	CCNGG	3 cut(s)	351, 1915, 2453
StyI	CCWWGG	3 cut(s)	601, 907, 1086
TaaI	ACNGT	6 cut(s)	342, 443, 976, 1332, 2207, 2472
TaiI	ACGT	2 cut(s)	466, 2197
TaqI	TCGA	6 cut(s)	157, 1245, 1285, 1941, 2464, 2619
TatI	WGTACW	3 cut(s)	3, 546, 2145
TauI	GCSGC	2 cut(s)	338, 2698
TfiI	GAWTC	5 cut(s)	67, 2226, 2554, 2641, 2671
TseFI	GTSAC	6 cut(s)	1355, 1610, 1632, 1951, 2425, 2710
Tsp45I	GTSAC	6 cut(s)	1355, 1610, 1632, 1951, 2425, 2710
TspGWI	ACGGA	5 cut(s)	1733, 1775, 2318, 2411, 2558
Van91I	CCANNNNNTGG	1 cut(s)	1712
VneI	GTGCAC	1 cut(s)	2208
VpaK11BI	GGWCC	1 cut(s)	1577
VspI	ATTAAT	2 cut(s)	1401, 1803
XagI	CCTNNNNNAGG	1 cut(s)	2740
XapI	RAATTY	3 cut(s)	700, 2117, 2163
XceI	RCATGY	4 cut(s)	313, 1172, 1244, 2133
XcmI	CCANNNNNNNNNTGG	2 cut(s)	395, 685
XmiI	GTMKAC	1 cut(s)	466
XmnI	GAANNNNTTC	3 cut(s)	153, 846, 1152
XspI	CTAG	5 cut(s)	32, 300, 708, 1419, 1949
ZrmI	AGTACT	1 cut(s)	548
Zsp2I	ATGCAT	2 cut(s)	286, 1665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.