Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0027913.1

Orthogroup ID

OG0010024

Physical Location & Seq

Genomic Coordinates Reverse (-)

5523 .. 14525

Gene Structure 9003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0027913.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2916 bp

atgatgacggtgcacggcgaggtgaggctgccccaggcggtggcgtctagggctcagtttggtgtggagtcttttaagcctgagccttcttcgctcagcttagtctccttcaagcctccggattctcatgaagtggatgaggatgcgcatttggctattgctcaccaaatgtacaagtccggtaactataaagaggccttggagcgtagcaatatcgtatatgataggaatccaattcgaactgataacctccttcttttgggtgcaatatattatcagctgcatgactttgatatgtgtattgccaaaaatgaagaagcccttcgaattgaaccacattttgctgagtgttatggcaacatggccaatgcttggaaggaaaaaggcaatagtgaccttgctatccgctactatttgattgccattgagcttcgacccaatttctgtgatgcatggtcaaacttagctagtgcgtacatgcggaaaggaaggcttgaagaggcagcccagtgctgtcgtcaggcgcttcagctgaatccccatttggttgacgcccatagcaaccttggtaatttaatgaaagcacgaggcttggtgcaagaagcatacagttgctacctcgaggctctacgtatacagccaaattttgctattgcttggtcaaatcttgctggccttttcatggagtctggtgatcttaatagagctctgcagtattataaggaggctgtgaaactcaaacctgcttttccggatgcgtatctcaaccttgggaatgtttataaggctttgggattgcctcaagaggcaattgtgtgttatcagcgtgccctgcagacaagacctaactatgccatggctttcggtaatctggccagtacgtattatgagcaaggtcaactggatttggcagtcttacattacaagcaagccattgcttgtgatccaagatttttggaggcttacaataatttgggtaatgctttgaaagacattggcagagtggacgaagcaattcaatgctacaatcaatgcctcactctacaacctaatcatccacaagcacttaccaacctcgggaatatttatatggaatggaacatggtagctgctgctgcttcttactataaggccacgttgactgtgacaactgggttgtctgctcctttcaataatcttgctataatttataaacaacagggaaattacgcagatgcaatctcttgctacaatgaggttcttcgcattgatcctttggcagctgatgggcttgtcaataggggcaacacttacaaggagattggtagagttagtgaggcaattcaggattacatacatgcaatatctgtccggccaactatggcagaagctcatgcaaacttggcttcagcttacaaggatagtggacatgtggaggctgctattaagagctacaaacaggcattacatcttcgaccggactttccagaggcaacttgtaatcttttacatacgttacagtgtgtgtgcagttgggaggaccgtgataaaatgttcactgaagttgaagggattatcaggaggcagatcaatatgtctctcttgcctagtgtgcagcctttccacgcaatagcatatcctattgatccaatgcttgcacttgatattagccgtaaatatgctgcacagtgctccataattgcatcccggtttggattgactgccttcaaccatcctgctccaattcccataaagtgtaatggtggattcgagagacttagagttggatatgtaagcagtgactttggtaatcacccattgtcacatcttatgggatctgtttttgggatgcacaataaggagaatgttgaggttttctgttatgccttgagtccaaatgatggaacggaatggagacagcgtacccagtctgaagcagagcactttgttgatgtctcatctatgacatcagatatgattgccaaaatgattaatgaggacaacatccagattttaattaatcttaatggttatacaaagggggcgagaaatgaaatatttgctatgcagcctgcacctgttcaggtttcatacatggggttccctgggaccactggggcaaattacattgattacttggtcactgatgagtttgtctcacctttgcgcttctcacatatttactctgagaagcttgttcatcttccacattgttactttgtgaatgactataagcagaaaaatctggatgtattggatccaaattgtcggcacaaaagatcagattatggtctcccagaggataaatttatatttgcaaccttcaatcagttgtacaaaatggatcctgaaatatttaatacttggtgcaatattcttaaacgtgtacccaacagtgcactctggctcctcagattcccagctgcaggcgaaatgagactccgtacatatgctgctgctcaaggagtgcaagcagaccagattatttttacagatgttgctatgaaaggtgaacatatcaggcgcagtgctttagcagatttgttccttgacacgcctttatgcaatgcacatacaaccggcacagatgttctatgggccggtttaccaatggtgacccttccccttgagaagatggccaccagggttgctggatctttgtgtctcgccactggactgggggaggagatgatagttagcagtatgaaagagtatgaagagaaggcagtatctttggcattgaatccctcaaagctccaggcgcttaccaacaaactcaaggcagtccgaatgacttgccctctgtttgacacaacacgttgggtgaggaatctggaaagggcttatttcaaaatgtggaatctgcattgctcaggccagcgtccccagcattttaaagttgctgagaatgatttggatttcccttatgatagatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006464 GO:0006486 GO:0006493 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0016740 GO:0016757 GO:0019538 GO:0034645 GO:0036211 GO:0043170 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0070085 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00514 ko04931 map00514 map04931

Pfam Domains

Protein Families

Glyco_transf_41 TPR_1 TPR_11 TPR_2 TPR_8

Protein Analysis

971

Amino Acids

109.48

Weight (kDa)

6.25

Isoelectric Point (pI)

40.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010024)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04240 AT3G04240
fragaria_vesca	FvH4_6g01310 FvH4_6g01310 FvH4_6g01310
malus_domestica	MD04G1235300.v1.1 MD12G1253100.v1.1
prunus_persica	Prupe.6G355200_v2.0.a1 Prupe.6G355200_v2.0.a1
pyrus_communis	pycom04g20880 pycom12g23220
rosa_chinensis	RchiOBHm_Chr3g0448861
rosa_laevigata	RLG00000025870
rosa_multiflora	Rmu_sc0003116.1_g000022 Rmu_sc0027913.1_g000003
rosa_roxburghii	Rroxscaffold_6G00427070
rosa_rugosa	Rorug02G0616800
rosa_samantha	Rh3AG015100 Rh3CG013800 Rh3DG015400
rosa_wichuraiana	Rw3G001120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	720, 783, 1191
AbsI	CCTCGAGG	1 cut(s)	620
Acc16I	TGCGCA	1 cut(s)	147
Acc36I	ACCTGC	1 cut(s)	751
AccB7I	CCANNNNNTGG	3 cut(s)	40, 372, 1880
AccI	GTMKAC	1 cut(s)	634
AccIII	TCCGGA	2 cut(s)	118, 751
AciI	CCGC	3 cut(s)	38, 406, 481
AclWI	GGATC	9 cut(s)	938, 1244, 1619, 1822, 2231, 2244, 2318, 2331, 2641
AcoI	YGGCCR	4 cut(s)	363, 873, 1352, 2616
AcsI	RAATTY	2 cut(s)	643, 2285
AcuI	CTGAAG	4 cut(s)	512, 1371, 1560, 1932
AcyI	GRCGYC	2 cut(s)	44, 552
AfaI	GTAC	7 cut(s)	173, 476, 880, 1903, 2315, 2367, 2425
AfiI	CCNNNNNNNGG	7 cut(s)	40, 259, 372, 682, 1077, 1880, 2405
AflIII	ACRYGT	3 cut(s)	1408, 2362, 2795
AjnI	CCWGG	4 cut(s)	33, 2083, 2621, 2736
AjuI	GAANNNNNNNTTGG	2 cut(s)	527, 559
Alw21I	GWGCWC	5 cut(s)	15, 709, 1673, 1923, 2380
Alw26I	GTCTC	9 cut(s)	109, 1581, 1747, 1888, 1939, 2140, 2276, 2410, 2648
Alw44I	GTGCAC	2 cut(s)	11, 2376
AlwI	GGATC	9 cut(s)	938, 1244, 1619, 1822, 2231, 2244, 2318, 2331, 2641
Ama87I	CYCGRG	2 cut(s)	620, 1076
Aor13HI	TCCGGA	2 cut(s)	118, 751
AoxI	GGCC	9 cut(s)	195, 363, 673, 873, 1131, 1352, 2577, 2616, 2854
ApaLI	GTGCAC	2 cut(s)	11, 2376
ApoI	RAATTY	2 cut(s)	643, 2285
AseI	ATTAAT	2 cut(s)	1971, 1998
Asp700I	GAANNNNTTC	2 cut(s)	321, 1014
AspLEI	GCGC	5 cut(s)	148, 526, 2148, 2505, 2743
AspS9I	GGNCC	3 cut(s)	1519, 2088, 2577
AsuC2I	CCSGG	1 cut(s)	1687
AsuHPI	GGTGA	8 cut(s)	34, 155, 704, 1784, 2130, 2501, 2605, 2815
AsuII	TTCGAA	2 cut(s)	238, 325
AvaI	CYCGRG	2 cut(s)	620, 1076
AvaII	GGWCC	2 cut(s)	1519, 2088
BaeGI	GKGCMC	3 cut(s)	15, 832, 2380
BalI	TGGCCA	3 cut(s)	365, 875, 2618
BamHI	GGATCC	2 cut(s)	2236, 2323
BanII	GRGCYC	2 cut(s)	55, 709
BauI	CACGAG	1 cut(s)	585
Bbv12I	GWGCWC	5 cut(s)	15, 709, 1673, 1923, 2380
BccI	CCATC	4 cut(s)	1259, 1719, 1874, 2608
BceAI	ACGGC	2 cut(s)	31, 1635
BcgI	CGANNNNNNTGC	2 cut(s)	2757, 2791
BciT130I	CCWGG	4 cut(s)	35, 2085, 2623, 2738
BcnI	CCSGG	1 cut(s)	1687
BcoDI	GTCTC	9 cut(s)	109, 1581, 1747, 1888, 1939, 2140, 2276, 2410, 2648
BfaI	CTAG	3 cut(s)	48, 468, 1587
BfmI	CTRYAG	3 cut(s)	710, 833, 2403
BfoI	RGCGCY	2 cut(s)	527, 2744
BfuAI	ACCTGC	1 cut(s)	751
BlpI	GCTNAGC	1 cut(s)	95
Bme1390I	CCNGG	5 cut(s)	35, 1687, 2085, 2623, 2738
Bme18I	GGWCC	2 cut(s)	1519, 2088
BmeT110I	CYCGRG	2 cut(s)	620, 1076
BmgT120I	GGNCC	3 cut(s)	1519, 2088, 2577
BmiI	GGNNCC	5 cut(s)	2081, 2089, 2238, 2325, 2387
BmrFI	CCNGG	5 cut(s)	35, 1687, 2085, 2623, 2738
BmrI	ACTGGG	5 cut(s)	502, 1161, 1900, 2103, 2666
BmsI	GCATC	6 cut(s)	133, 439, 745, 1204, 1691, 1818
BmuI	ACTGGG	5 cut(s)	502, 1161, 1900, 2103, 2666
BplI	GAGNNNNNCTC	2 cut(s)	2120, 2152
BpmI	CTGGAG	1 cut(s)	2720
Bpu10I	CCTNAGC	2 cut(s)	81, 2851
Bpu1102I	GCTNAGC	1 cut(s)	95
Bpu14I	TTCGAA	2 cut(s)	238, 325
BpuEI	CTTGAG	5 cut(s)	786, 1888, 2424, 2627, 2741
BpuMI	CCSGG	1 cut(s)	1687
BsaAI	YACGTR	2 cut(s)	632, 882
BsaBI	GATNNNNATC	2 cut(s)	228, 759
BsaHI	GRCGYC	2 cut(s)	44, 552
BsaI	GGTCTC	1 cut(s)	2276
BsaJI	CCNNGG	9 cut(s)	33, 198, 565, 769, 855, 1075, 2083, 2084, 2622
BsaWI	WCCGGW	4 cut(s)	118, 179, 751, 1456
BsaXI	ACNNNNNCTCC	4 cut(s)	1885, 1915, 2370, 2400
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 259, 372, 682, 1077, 1880, 2405
Bse118I	RCCGGY	2 cut(s)	2558, 2579
Bse1I	ACTGG	8 cut(s)	508, 876, 906, 1156, 1906, 2098, 2656, 2661
Bse3DI	GCAATG	3 cut(s)	933, 2551, 2845
Bse8I	GATNNNNATC	2 cut(s)	228, 759
BseAI	TCCGGA	2 cut(s)	118, 751
BseBI	CCWGG	4 cut(s)	35, 2085, 2623, 2738
BseDI	CCNNGG	9 cut(s)	33, 198, 565, 769, 855, 1075, 2083, 2084, 2622
BseGI	GGATG	9 cut(s)	142, 148, 760, 1054, 1682, 1711, 1833, 1983, 2233
BseJI	GATNNNNATC	2 cut(s)	228, 759
BseLI	CCNNNNNNNGG	7 cut(s)	40, 259, 372, 682, 1077, 1880, 2405
BseMI	GCAATG	3 cut(s)	933, 2551, 2845
BseMII	CTCAG	8 cut(s)	68, 72, 109, 336, 2157, 2404, 2865, 2874
BseNI	ACTGG	8 cut(s)	508, 876, 906, 1156, 1906, 2098, 2656, 2661
BseRI	GAGGAG	2 cut(s)	2378, 2678
BseSI	GKGCMC	3 cut(s)	15, 832, 2380
BseYI	CCCAGC	2 cut(s)	2398, 2865
BsgI	GTGCAG	4 cut(s)	1528, 1613, 1647, 2037
Bsh1285I	CGRYCG	1 cut(s)	1457
BshFI	GGCC	9 cut(s)	197, 365, 675, 875, 1133, 1354, 2579, 2618, 2856
BsiEI	CGRYCG	1 cut(s)	1457
BsiHKAI	GWGCWC	5 cut(s)	15, 709, 1673, 1923, 2380
BsiHKCI	CYCGRG	2 cut(s)	620, 1076
BsiSI	CCGG	8 cut(s)	119, 180, 752, 1351, 1457, 1687, 2559, 2580
BslFI	GGGAC	2 cut(s)	2101, 2847
BslI	CCNNNNNNNGG	7 cut(s)	40, 259, 372, 682, 1077, 1880, 2405
BsmAI	GTCTC	9 cut(s)	109, 1581, 1747, 1888, 1939, 2140, 2276, 2410, 2648
BsmFI	GGGAC	2 cut(s)	2101, 2847
BsnI	GGCC	9 cut(s)	197, 365, 675, 875, 1133, 1354, 2579, 2618, 2856
Bso31I	GGTCTC	1 cut(s)	2276
BsoBI	CYCGRG	2 cut(s)	620, 1076
Bsp119I	TTCGAA	2 cut(s)	238, 325
Bsp1286I	GDGCHC	7 cut(s)	15, 55, 709, 832, 1673, 1923, 2380
Bsp13I	TCCGGA	2 cut(s)	118, 751
Bsp1407I	TGTACA	2 cut(s)	171, 2313
Bsp1720I	GCTNAGC	1 cut(s)	95
Bsp19I	CCATGG	1 cut(s)	855
BspACI	CCGC	3 cut(s)	38, 406, 481
BspANI	GGCC	9 cut(s)	197, 365, 675, 875, 1133, 1354, 2579, 2618, 2856
BspCNI	CTCAG	8 cut(s)	67, 73, 108, 337, 2158, 2403, 2864, 2875
BspEI	TCCGGA	2 cut(s)	118, 751
BspHI	TCATGA	1 cut(s)	127
BspLI	GGNNCC	5 cut(s)	2081, 2089, 2238, 2325, 2387
BspMAI	CTGCAG	3 cut(s)	714, 837, 2407
BspMI	ACCTGC	1 cut(s)	751
BspPI	GGATC	9 cut(s)	938, 1244, 1619, 1822, 2231, 2244, 2318, 2331, 2641
BspT104I	TTCGAA	2 cut(s)	238, 325
BspTNI	GGTCTC	1 cut(s)	2276
BsrDI	GCAATG	3 cut(s)	933, 2551, 2845
BsrFI	RCCGGY	2 cut(s)	2558, 2579
BsrGI	TGTACA	2 cut(s)	171, 2313
BsrI	ACTGG	8 cut(s)	508, 876, 906, 1156, 1906, 2098, 2656, 2661
BssAI	RCCGGY	2 cut(s)	2558, 2579
BssECI	CCNNGG	9 cut(s)	33, 198, 565, 769, 855, 1075, 2083, 2084, 2622
BssNAI	GTATAC	1 cut(s)	635
BssNI	GRCGYC	2 cut(s)	44, 552
BssSI	CACGAG	1 cut(s)	585
BssT1I	CCWWGG	4 cut(s)	198, 565, 769, 855
Bst1107I	GTATAC	1 cut(s)	635
Bst2BI	CACGAG	1 cut(s)	585
Bst2UI	CCWGG	4 cut(s)	35, 2085, 2623, 2738
Bst4CI	ACNGT	7 cut(s)	10, 611, 1144, 1500, 1523, 1668, 2375
Bst6I	CTCTTC	2 cut(s)	492, 2691
BstACI	GRCGYC	2 cut(s)	44, 552
BstAUI	TGTACA	2 cut(s)	171, 2313
BstBAI	YACGTR	2 cut(s)	632, 882
BstBI	TTCGAA	2 cut(s)	238, 325
BstC8I	GCNNGC	8 cut(s)	673, 828, 930, 1635, 2052, 2407, 2451, 2858
BstDSI	CCRYGG	1 cut(s)	855
BstEII	GGTNACC	1 cut(s)	2593
BstF5I	GGATG	9 cut(s)	142, 148, 760, 1054, 1682, 1711, 1833, 1983, 2233
BstH2I	RGCGCY	2 cut(s)	527, 2744
BstHHI	GCGC	5 cut(s)	148, 526, 2148, 2505, 2743
BstMAI	GTCTC	9 cut(s)	109, 1581, 1747, 1888, 1939, 2140, 2276, 2410, 2648
BstMCI	CGRYCG	1 cut(s)	1457
BstMWI	GCNNNNNNNGC	9 cut(s)	50, 91, 152, 832, 1115, 1382, 1591, 2740, 2866
BstNI	CCWGG	4 cut(s)	35, 2085, 2623, 2738
BstNSI	RCATGY	3 cut(s)	481, 1340, 1412
BstPI	GGTNACC	1 cut(s)	2593
BstSCI	CCNGG	5 cut(s)	33, 1685, 2083, 2621, 2736
BstSFI	CTRYAG	3 cut(s)	710, 833, 2403
BstSLI	GKGCMC	3 cut(s)	15, 832, 2380
BstSNI	TACGTA	2 cut(s)	632, 882
BstX2I	RGATCY	4 cut(s)	1814, 2236, 2323, 2633
BstXI	CCANNNNNNTGG	1 cut(s)	2656
BstYI	RGATCY	4 cut(s)	1814, 2236, 2323, 2633
BstZ17I	GTATAC	1 cut(s)	635
BsuRI	GGCC	9 cut(s)	197, 365, 675, 875, 1133, 1354, 2579, 2618, 2856
BtgI	CCRYGG	1 cut(s)	855
BtsCI	GGATG	9 cut(s)	142, 148, 760, 1054, 1682, 1711, 1833, 1983, 2233
BtsI	GCAGTG	2 cut(s)	1783, 2512
BveI	ACCTGC	1 cut(s)	751
Cac8I	GCNNGC	8 cut(s)	673, 828, 930, 1635, 2052, 2407, 2451, 2858
CciI	TCATGA	1 cut(s)	127
CfoI	GCGC	5 cut(s)	148, 526, 2148, 2505, 2743
Cfr10I	RCCGGY	2 cut(s)	2558, 2579
Cfr13I	GGNCC	3 cut(s)	1519, 2088, 2577
CseI	GACGC	3 cut(s)	33, 560, 2849
Csp6I	GTAC	7 cut(s)	172, 475, 879, 1902, 2314, 2366, 2424
CspCI	CAANNNNNGTGG	4 cut(s)	1384, 1419, 2608, 2643
CviQI	GTAC	7 cut(s)	172, 475, 879, 1902, 2314, 2366, 2424
DraI	TTTAAA	1 cut(s)	2875
EaeI	YGGCCR	4 cut(s)	363, 873, 1352, 2616
Eam1104I	CTCTTC	2 cut(s)	492, 2691
EarI	CTCTTC	2 cut(s)	492, 2691
Ecl136II	GAGCTC	1 cut(s)	707
Eco105I	TACGTA	2 cut(s)	632, 882
Eco130I	CCWWGG	4 cut(s)	198, 565, 769, 855
Eco147I	AGGCCT	1 cut(s)	197
Eco24I	GRGCYC	2 cut(s)	55, 709
Eco31I	GGTCTC	1 cut(s)	2276
Eco47I	GGWCC	2 cut(s)	1519, 2088
Eco53kI	GAGCTC	1 cut(s)	707
Eco57I	CTGAAG	4 cut(s)	512, 1371, 1560, 1932
Eco88I	CYCGRG	2 cut(s)	620, 1076
Eco91I	GGTNACC	1 cut(s)	2593
EcoICRI	GAGCTC	1 cut(s)	707
EcoO65I	GGTNACC	1 cut(s)	2593
EcoRII	CCWGG	4 cut(s)	33, 2083, 2621, 2736
EcoT14I	CCWWGG	4 cut(s)	198, 565, 769, 855
EcoT22I	ATGCAT	1 cut(s)	454
EcoT38I	GRGCYC	2 cut(s)	55, 709
ErhI	CCWWGG	4 cut(s)	198, 565, 769, 855
FalI	AAGNNNNNCTT	4 cut(s)	306, 338, 477, 509
FaqI	GGGAC	2 cut(s)	2101, 2847
FauNDI	CATATG	1 cut(s)	2428
FblI	GTMKAC	1 cut(s)	634
FokI	GGATG	9 cut(s)	149, 155, 767, 1041, 1669, 1698, 1840, 1970, 2240
FriOI	GRGCYC	2 cut(s)	55, 709
FspAI	RTGCGCAY	1 cut(s)	147
FspBI	CTAG	3 cut(s)	48, 468, 1587
FspI	TGCGCA	1 cut(s)	147
GlaI	GCGC	5 cut(s)	147, 525, 2147, 2504, 2742
GsaI	CCCAGC	2 cut(s)	2402, 2869
GsuI	CTGGAG	1 cut(s)	2720
HaeII	RGCGCY	2 cut(s)	527, 2744
HaeIII	GGCC	9 cut(s)	197, 365, 675, 875, 1133, 1354, 2579, 2618, 2856
HapII	CCGG	8 cut(s)	119, 180, 752, 1351, 1457, 1687, 2559, 2580
HgaI	GACGC	3 cut(s)	33, 560, 2849
HhaI	GCGC	5 cut(s)	148, 526, 2148, 2505, 2743
Hin1I	GRCGYC	2 cut(s)	44, 552
Hin6I	GCGC	5 cut(s)	146, 524, 2146, 2503, 2741
HinP1I	GCGC	5 cut(s)	146, 524, 2146, 2503, 2741
HincII	GTYRAC	3 cut(s)	550, 899, 1140
HindII	GTYRAC	3 cut(s)	550, 899, 1140
HindIII	AAGCTT	1 cut(s)	2171
HpaII	CCGG	8 cut(s)	119, 180, 752, 1351, 1457, 1687, 2559, 2580
HphI	GGTGA	8 cut(s)	34, 155, 704, 1784, 2130, 2501, 2605, 2815
Hpy188I	TCNGA	6 cut(s)	1912, 1951, 2167, 2263, 2393, 2768
HpyCH4III	ACNGT	7 cut(s)	10, 611, 1144, 1500, 1523, 1668, 2375
HpyCH4IV	ACGT	6 cut(s)	631, 881, 1136, 1493, 2362, 2797
HpyF10VI	GCNNNNNNNGC	9 cut(s)	50, 91, 152, 832, 1115, 1382, 1591, 2740, 2866
HpySE526I	ACGT	6 cut(s)	631, 881, 1136, 1493, 2362, 2797
Hsp92I	GRCGYC	2 cut(s)	44, 552
HspAI	GCGC	5 cut(s)	146, 524, 2146, 2503, 2741
Kpn2I	TCCGGA	2 cut(s)	118, 751
LmnI	GCTCC	6 cut(s)	202, 1168, 1676, 1723, 2391, 2739
LweI	GCATC	6 cut(s)	133, 439, 745, 1204, 1691, 1818
MaeI	CTAG	3 cut(s)	48, 468, 1587
MaeII	ACGT	6 cut(s)	631, 881, 1136, 1493, 2362, 2797
MaeIII	GTNAC	9 cut(s)	182, 392, 1144, 1494, 1778, 1800, 2119, 2192, 2593
MboII	GAAGA	8 cut(s)	81, 326, 509, 1232, 1442, 2174, 2623, 2708
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	4 cut(s)	1814, 2236, 2323, 2633
MhlI	GDGCHC	7 cut(s)	15, 55, 709, 832, 1673, 1923, 2380
MlsI	TGGCCA	3 cut(s)	365, 875, 2618
MluNI	TGGCCA	3 cut(s)	365, 875, 2618
MlyI	GAGTC	4 cut(s)	77, 695, 1879, 2412
MmeI	TCCRAC	1 cut(s)	1744
Mox20I	TGGCCA	3 cut(s)	365, 875, 2618
Mph1103I	ATGCAT	1 cut(s)	454
MroI	TCCGGA	2 cut(s)	118, 751
MroXI	GAANNNNTTC	2 cut(s)	321, 1014
MscI	TGGCCA	3 cut(s)	365, 875, 2618
Msp20I	TGGCCA	3 cut(s)	365, 875, 2618
MspA1I	CMGCKG	4 cut(s)	280, 532, 1262, 2402
MspI	CCGG	8 cut(s)	119, 180, 752, 1351, 1457, 1687, 2559, 2580
MspR9I	CCNGG	5 cut(s)	35, 1687, 2085, 2623, 2738
MunI	CAATTG	1 cut(s)	810
MvaI	CCWGG	4 cut(s)	35, 2085, 2623, 2738
MwoI	GCNNNNNNNGC	9 cut(s)	50, 91, 152, 832, 1115, 1382, 1591, 2740, 2866
NciI	CCSGG	1 cut(s)	1687
NcoI	CCATGG	1 cut(s)	855
NdeI	CATATG	1 cut(s)	2428
NlaIV	GGNNCC	5 cut(s)	2081, 2089, 2238, 2325, 2387
NmuCI	GTSAC	6 cut(s)	392, 1144, 1778, 1800, 2119, 2593
NsbI	TGCGCA	1 cut(s)	147
NsiI	ATGCAT	1 cut(s)	454
NspI	RCATGY	3 cut(s)	481, 1340, 1412
NspV	TTCGAA	2 cut(s)	238, 325
PacI	TTAATTAA	1 cut(s)	1998
PaeR7I	CTCGAG	1 cut(s)	620
PagI	TCATGA	1 cut(s)	127
PasI	CCCWGGG	1 cut(s)	2084
PceI	AGGCCT	1 cut(s)	197
PciI	ACATGT	1 cut(s)	1408
PdmI	GAANNNNTTC	2 cut(s)	321, 1014
PfeI	GAWTC	8 cut(s)	122, 229, 535, 1746, 2394, 2722, 2809, 2839
PflMI	CCANNNNNTGG	3 cut(s)	40, 372, 1880
PleI	GAGTC	4 cut(s)	76, 694, 1878, 2412
PpsI	GAGTC	4 cut(s)	76, 694, 1878, 2412
Ppu21I	YACGTR	2 cut(s)	632, 882
PscI	ACATGT	1 cut(s)	1408
PshBI	ATTAAT	2 cut(s)	1971, 1998
PsiI	TTATAA	3 cut(s)	720, 783, 1191
Psp124BI	GAGCTC	1 cut(s)	709
Psp6I	CCWGG	4 cut(s)	33, 2083, 2621, 2736
PspEI	GGTNACC	1 cut(s)	2593
PspFI	CCCAGC	2 cut(s)	2398, 2865
PspGI	CCWGG	4 cut(s)	33, 2083, 2621, 2736
PspN4I	GGNNCC	5 cut(s)	2081, 2089, 2238, 2325, 2387
PspPI	GGNCC	3 cut(s)	1519, 2088, 2577
PspXI	VCTCGAGB	1 cut(s)	620
PstI	CTGCAG	3 cut(s)	714, 837, 2407
PsuI	RGATCY	4 cut(s)	1814, 2236, 2323, 2633
PvuII	CAGCTG	4 cut(s)	280, 532, 1262, 2402
RsaI	GTAC	7 cut(s)	173, 476, 880, 1903, 2315, 2367, 2425
RsaNI	GTAC	7 cut(s)	172, 475, 879, 1902, 2314, 2366, 2424
SacI	GAGCTC	1 cut(s)	709
Sau96I	GGNCC	3 cut(s)	1519, 2088, 2577
SchI	GAGTC	4 cut(s)	77, 695, 1879, 2412
ScrFI	CCNGG	5 cut(s)	35, 1687, 2085, 2623, 2738
SduI	GDGCHC	7 cut(s)	15, 55, 709, 832, 1673, 1923, 2380
SfaNI	GCATC	6 cut(s)	133, 439, 745, 1204, 1691, 1818
SfcI	CTRYAG	3 cut(s)	710, 833, 2403
Sfr274I	CTCGAG	1 cut(s)	620
SfuI	TTCGAA	2 cut(s)	238, 325
SinI	GGWCC	2 cut(s)	1519, 2088
SlaI	CTCGAG	1 cut(s)	620
SmlI	CTYRAG	6 cut(s)	620, 801, 1867, 2439, 2606, 2756
SmoI	CTYRAG	6 cut(s)	620, 801, 1867, 2439, 2606, 2756
SnaBI	TACGTA	2 cut(s)	632, 882
SseBI	AGGCCT	1 cut(s)	197
SsiI	CCGC	3 cut(s)	38, 406, 481
SspI	AATATT	4 cut(s)	1084, 2037, 2334, 2353
SspMI	CTAG	3 cut(s)	48, 468, 1587
SstI	GAGCTC	1 cut(s)	709
StuI	AGGCCT	1 cut(s)	197
StyD4I	CCNGG	5 cut(s)	33, 1685, 2083, 2621, 2736
StyI	CCWWGG	4 cut(s)	198, 565, 769, 855
TaaI	ACNGT	7 cut(s)	10, 611, 1144, 1500, 1523, 1668, 2375
TaiI	ACGT	6 cut(s)	634, 884, 1139, 1496, 2365, 2800
TaqI	TCGA	6 cut(s)	238, 325, 433, 621, 1453, 1749
TatI	WGTACW	2 cut(s)	171, 2313
TfiI	GAWTC	8 cut(s)	122, 229, 535, 1746, 2394, 2722, 2809, 2839
TseFI	GTSAC	6 cut(s)	392, 1144, 1778, 1800, 2119, 2593
Tsp45I	GTSAC	6 cut(s)	392, 1144, 1778, 1800, 2119, 2593
TspGWI	ACGGA	2 cut(s)	1901, 2411
Van91I	CCANNNNNTGG	3 cut(s)	40, 372, 1880
VneI	GTGCAC	2 cut(s)	11, 2376
VpaK11BI	GGWCC	2 cut(s)	1519, 2088
VspI	ATTAAT	2 cut(s)	1971, 1998
XapI	RAATTY	2 cut(s)	643, 2285
XceI	RCATGY	3 cut(s)	481, 1340, 1412
XcmI	CCANNNNNNNNNTGG	1 cut(s)	563
XhoI	CTCGAG	1 cut(s)	620
XmiI	GTMKAC	1 cut(s)	634
XmnI	GAANNNNTTC	2 cut(s)	321, 1014
XspI	CTAG	3 cut(s)	48, 468, 1587
Zsp2I	ATGCAT	1 cut(s)	454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.