AT3G04350

Vacuolar protein sorting-associated protein 62

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0010762
Physical Location & Seq
Reverse (-)
1153723 .. 1156876
3154 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G04350.1

Sequence Viewer

Length: 1704 bp
ATGTTTGGGTGTGATTGTTTTTACTGGAGCAGAGGAATCTCCGAGTTGGATTCGGAATCGTCCGAGCCAAAGCCCTTCTCACTTCCGGCTCCTCTTCCTAGTTGGCCGCAAGGTAAAGGTTTTGCCACAGGAAGAATTAGCCTAGGAGAAATAGAAGTGGTGAAAATCACCAAGTTCCATCGAGTTTGGAGCTCTGATTCATCACACGACAAATCAAAACGTGCTACATTTTACAGAGCCGATGACATTCCAGAAGGATTCCATTGCCTTGGTCACTATTGCCAGCCAACCGATCAGCCCTTGAGAGGTTATGTACTTGCAGCTCGGACTAGCAAAGCCGTCAATGCTGATGATTTCCCGCCCTTGAAAAAGCCTGTGAGTTATTCTTTAGTTTGGAGTGCAGATTCAGAGAAAAATGGTGGTGGTTATTTCTGGCTACCTAATCCTCCGGTTGGTTACAGAGCAATGGGAGTTATTGTAACCCATGAACCAGGTGAACCTGAAACAGAGGAGGTCAGATGTGTAAGAGAGGATCTTACAGAGAGTTGTGAAACCTCTGAGATGATACTTGAGGTGGGTTCTTCGAAGAAGTCGAACGGCTCTAGTTCTCCTTTTAGTGTATGGAGCACCCGACCTTGCGAGAGAGGGATGCTGTCACAAGGTGTCGCTGTTGGGTCATTCTTTTGCTGCACGTATGATCTGTCGTCTGAGAGGACGGTCCCTGATATCGGATGCTTAAAGAATCTTGATCCGACCTTACACGCGATGCCAAATCTCGACCAGGTCCATGCGGTTATCGAACACTTCGGACCAACAGTCTACTTCCACCCAGAAGAGGCTTACATGCCTTCATCTGTACAATGGTTCTTTAAGAATGGAGCTTTGTTGTACCGGTCAGGGAAATCAGAAGGTCAACCGATTAACTCCACGGGCTCGAACTTGCCTGCTGGAGGATGCAATGATATGGATTTCTGGATAGATCTTCCTGAAGACGAAGAAGCAAAGAGTAATCTCAAGAAAGGAAACCTTGAAAGCTCGGAGCTTTACGTTCATGTGAAACCAGCACTTGGTGGAACTTTCACCGACATCGTTATGTGGATTTTCTGCCCCTTTAATGGCCCAGCCACGCTCAAAATCGGCCTATTCACGTTACCTATGACCCGCATAGGAGAACATGTCGGTGATTGGGAACATTTCACTTTCCGCATATGTAATTTCTCTGGTGAGCTTTGGCAAATGTTCTTTTCTCAGCATAGTGGTGGTGGTTGGGTTGATGCATCAGATATTGAGTTTGTGAAAGATAACAAACCGGCTGTGTACTCATCTAAACACGGACATGCGAGTTTCCCTCATCCAGGAATGTACCTCCAAGGCTCGTCAAAGCTCGGGATTGGAGTCAGAAACGATGTTGCAAAAAGCAAGTACATTGTGGATTCAAGCCAAAGGTATGTGATAGTAGCAGCTGAGTATTTAGGTAAAGGAGCTGTGATAGAGCCGTGCTGGTTACAGTATATGAGAGAATGGGGTCCGACCATTGCATATGATTCAGGGTCTGAGATCAATAAGATCATGAATCTTCTTCCTTTGGTTGTTAGGTTCTCTATTGAGAACATTGTTGATTTGTTTCCCATTGCTCTTTATGGAGAAGAAGGTCCCACAGGGCCAAAGGAGAAAGATAACTGGGAAGGAGATGAGATGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps62

Protein Analysis

567

Amino Acids

63.01

Weight (kDa)

5.2

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Vps62 PF06101 23 - 565 5e-268 Vacuolar protein sorting-associated protein 62
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010762)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04350 AT3G04350
fragaria_vesca FvH4_6g01580
malus_domestica MD00G1149300.v1.1 MD04G1232300.v1.1 MD07G1000700.v1.1
prunus_persica Prupe.2G000800_v2.0.a1 Prupe.6G351900_v2.0.a1
pyrus_communis pycom04g20570 pycom12g23000
rosa_chinensis RchiOBHm_Chr3g0449321
rosa_laevigata RLG00000025839
rosa_multiflora Rmu_sc0017357.1_g000003
rosa_roxburghii Rroxscaffold_6G00427330
rosa_rugosa Rorug02G0619700
rosa_samantha Rh3AG017700 Rh3BG017800 Rh3CG016800
rosa_wichuraiana Rw3G001360 Rw3G001390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1067
AccI GTMKAC 1 cut(s) 819
AccII CGCG 1 cut(s) 764
AciI CCGC 5 cut(s) 107, 359, 791, 1162, 1204
AclWI GGATC 2 cut(s) 540, 743
AcoI YGGCCR 1 cut(s) 104
AcuI CTGAAG 1 cut(s) 1008
AdeI CACNNNGTG 2 cut(s) 662, 1070
AfaI GTAC 6 cut(s) 315, 858, 890, 1319, 1364, 1424
AfiI CCNNNNNNNGG 8 cut(s) 305, 452, 728, 835, 950, 1067, 1115, 1355
AflIII ACRYGT 1 cut(s) 1174
AgeI ACCGGT 1 cut(s) 891
AgsI TTSAA 3 cut(s) 367, 1031, 1437
AhdI GACNNNNNGTC 1 cut(s) 815
AjnI CCWGG 3 cut(s) 490, 780, 1354
AluBI AGCT 9 cut(s) 192, 323, 881, 1035, 1042, 1228, 1384, 1463, 1484
AluI AGCT 9 cut(s) 192, 323, 881, 1035, 1042, 1228, 1384, 1463, 1484
Alw21I GWGCWC 2 cut(s) 194, 629
AlwI GGATC 2 cut(s) 540, 743
AlwNI CAGNNNCTG 1 cut(s) 1553
Ama87I CYCGRG 1 cut(s) 1385
AoxI GGCC 4 cut(s) 104, 1117, 1138, 1661
ApeKI GCWGC 3 cut(s) 320, 687, 1460
AsiGI ACCGGT 1 cut(s) 891
AspA2I CCTAGG 1 cut(s) 142
AspS9I GGNCC 7 cut(s) 718, 784, 809, 1118, 1526, 1652, 1661
AsuHPI GGTGA 6 cut(s) 160, 172, 506, 1072, 1193, 1235
AsuII TTCGAA 1 cut(s) 584
AvaI CYCGRG 1 cut(s) 1385
AvaII GGWCC 5 cut(s) 718, 784, 809, 1526, 1652
AvrII CCTAGG 1 cut(s) 142
BanII GRGCYC 2 cut(s) 194, 935
BbsI GAAGAC 1 cut(s) 996
Bbv12I GWGCWC 2 cut(s) 194, 629
BbvI GCAGC 3 cut(s) 332, 674, 1472
BccI CCATC 1 cut(s) 186
BceAI ACGGC 3 cut(s) 323, 613, 1480
BciT130I CCWGG 3 cut(s) 492, 782, 1356
BfaI CTAG 4 cut(s) 99, 143, 330, 603
BglII AGATCT 1 cut(s) 979
BisI GCNGC 4 cut(s) 107, 321, 688, 1461
BlnI CCTAGG 1 cut(s) 142
BlsI GCNGC 4 cut(s) 108, 322, 689, 1462
Bme1390I CCNGG 3 cut(s) 492, 782, 1356
Bme18I GGWCC 5 cut(s) 718, 784, 809, 1526, 1652
BmeRI GACNNNNNGTC 1 cut(s) 815
BmeT110I CYCGRG 1 cut(s) 1385
BmgT120I GGNCC 7 cut(s) 718, 784, 809, 1118, 1526, 1652, 1661
BmiI GGNNCC 4 cut(s) 90, 720, 1527, 1654
BmrFI CCNGG 3 cut(s) 492, 782, 1356
BmrI ACTGGG 1 cut(s) 1690
BmsI GCATC 6 cut(s) 639, 722, 756, 944, 1264, 1286
BmuI ACTGGG 1 cut(s) 1690
BpiI GAAGAC 1 cut(s) 996
BplI GAGNNNNNCTC 2 cut(s) 1333, 1365
BpmI CTGGAG 2 cut(s) 46, 969
Bpu14I TTCGAA 1 cut(s) 584
BpuEI CTTGAG 3 cut(s) 322, 590, 998
BsaAI YACGTR 1 cut(s) 693
BsaJI CCNNGG 4 cut(s) 142, 268, 927, 1369
BsaWI WCCGGW 2 cut(s) 448, 891
BsaXI ACNNNNNCTCC 4 cut(s) 462, 492, 1161, 1191
Bsc4I CCNNNNNNNGG 8 cut(s) 305, 452, 728, 835, 950, 1067, 1115, 1355
Bse118I RCCGGY 2 cut(s) 891, 1309
Bse1I ACTGG 2 cut(s) 29, 1685
Bse3DI GCAATG 5 cut(s) 262, 471, 964, 1533, 1629
BseBI CCWGG 3 cut(s) 492, 782, 1356
BseDI CCNNGG 4 cut(s) 142, 268, 927, 1369
BseGI GGATG 4 cut(s) 654, 737, 959, 1351
BseLI CCNNNNNNNGG 8 cut(s) 305, 452, 728, 835, 950, 1067, 1115, 1355
BseMI GCAATG 5 cut(s) 262, 471, 964, 1533, 1629
BseMII CTCAG 5 cut(s) 549, 699, 1262, 1455, 1545
BseNI ACTGG 2 cut(s) 29, 1685
BseRI GAGGAG 2 cut(s) 81, 524
BseXI GCAGC 3 cut(s) 332, 674, 1472
BseYI CCCAGC 1 cut(s) 1120
BsgI GTGCAG 2 cut(s) 420, 673
Bsh1236I CGCG 1 cut(s) 764
BshFI GGCC 4 cut(s) 106, 1119, 1140, 1663
BshTI ACCGGT 1 cut(s) 891
BsiHKAI GWGCWC 2 cut(s) 194, 629
BsiHKCI CYCGRG 1 cut(s) 1385
BsiSI CCGG 4 cut(s) 86, 449, 892, 1310
BslFI GGGAC 2 cut(s) 704, 1638
BslI CCNNNNNNNGG 8 cut(s) 305, 452, 728, 835, 950, 1067, 1115, 1355
BsmFI GGGAC 2 cut(s) 704, 1638
BsnI GGCC 4 cut(s) 106, 1119, 1140, 1663
BsoBI CYCGRG 1 cut(s) 1385
Bsp119I TTCGAA 1 cut(s) 584
Bsp1286I GDGCHC 3 cut(s) 194, 629, 935
Bsp1407I TGTACA 1 cut(s) 856
Bsp143I GATC 7 cut(s) 292, 532, 697, 748, 979, 1557, 1566
BspACI CCGC 5 cut(s) 107, 359, 791, 1162, 1204
BspANI GGCC 4 cut(s) 106, 1119, 1140, 1663
BspCNI CTCAG 5 cut(s) 550, 700, 1261, 1456, 1546
BspFNI CGCG 1 cut(s) 764
BspHI TCATGA 1 cut(s) 1569
BspLI GGNNCC 4 cut(s) 90, 720, 1527, 1654
BspPI GGATC 2 cut(s) 540, 743
BspT104I TTCGAA 1 cut(s) 584
BsrDI GCAATG 5 cut(s) 262, 471, 964, 1533, 1629
BsrFI RCCGGY 2 cut(s) 891, 1309
BsrGI TGTACA 1 cut(s) 856
BsrI ACTGG 2 cut(s) 29, 1685
BssAI RCCGGY 2 cut(s) 891, 1309
BssECI CCNNGG 4 cut(s) 142, 268, 927, 1369
BssMI GATC 7 cut(s) 292, 532, 697, 748, 979, 1557, 1566
BssT1I CCWWGG 3 cut(s) 142, 268, 1369
Bst2UI CCWGG 3 cut(s) 492, 782, 1356
Bst4CI ACNGT 3 cut(s) 718, 817, 1509
Bst6I CTCTTC 2 cut(s) 99, 828
BstAUI TGTACA 1 cut(s) 856
BstBAI YACGTR 1 cut(s) 693
BstBI TTCGAA 1 cut(s) 584
BstC8I GCNNGC 2 cut(s) 284, 945
BstDEI CTNAG 5 cut(s) 558, 708, 1248, 1464, 1554
BstDSI CCRYGG 1 cut(s) 927
BstENI CCTNNNNNAGG 2 cut(s) 948, 1353
BstF5I GGATG 4 cut(s) 654, 737, 959, 1351
BstFNI CGCG 1 cut(s) 764
BstKTI GATC 7 cut(s) 295, 535, 700, 751, 982, 1560, 1569
BstMBI GATC 7 cut(s) 292, 532, 697, 748, 979, 1557, 1566
BstMWI GCNNNNNNNGC 1 cut(s) 344
BstNI CCWGG 3 cut(s) 492, 782, 1356
BstNSI RCATGY 3 cut(s) 847, 1178, 1340
BstSCI CCNGG 3 cut(s) 490, 780, 1354
BstUI CGCG 1 cut(s) 764
BstV1I GCAGC 3 cut(s) 332, 674, 1472
BstV2I GAAGAC 1 cut(s) 996
BstX2I RGATCY 2 cut(s) 532, 979
BstXI CCANNNNNNTGG 1 cut(s) 269
BstYI RGATCY 2 cut(s) 532, 979
BsuRI GGCC 4 cut(s) 106, 1119, 1140, 1663
BtgI CCRYGG 1 cut(s) 927
BtgZI GCGATG 1 cut(s) 779
BtsCI GGATG 4 cut(s) 654, 737, 959, 1351
Cac8I GCNNGC 2 cut(s) 284, 945
CaiI CAGNNNCTG 1 cut(s) 1553
CciI TCATGA 1 cut(s) 1569
Cfr10I RCCGGY 2 cut(s) 891, 1309
Cfr13I GGNCC 7 cut(s) 718, 784, 809, 1118, 1526, 1652, 1661
CsiI ACCWGGT 2 cut(s) 490, 780
Csp6I GTAC 6 cut(s) 314, 857, 889, 1318, 1363, 1423
CspAI ACCGGT 1 cut(s) 891
CviAII CATG 7 cut(s) 485, 788, 844, 1052, 1175, 1337, 1570
CviQI GTAC 6 cut(s) 314, 857, 889, 1318, 1363, 1423
DdeI CTNAG 5 cut(s) 558, 708, 1248, 1464, 1554
DpnI GATC 7 cut(s) 294, 534, 699, 750, 981, 1559, 1568
DpnII GATC 7 cut(s) 292, 532, 697, 748, 979, 1557, 1566
DraIII CACNNNGTG 2 cut(s) 662, 1070
DriI GACNNNNNGTC 1 cut(s) 815
EaeI YGGCCR 1 cut(s) 104
Eam1104I CTCTTC 2 cut(s) 99, 828
Eam1105I GACNNNNNGTC 1 cut(s) 815
EarI CTCTTC 2 cut(s) 99, 828
Ecl136II GAGCTC 1 cut(s) 192
Eco130I CCWWGG 3 cut(s) 142, 268, 1369
Eco24I GRGCYC 2 cut(s) 194, 935
Eco32I GATATC 1 cut(s) 727
Eco47I GGWCC 5 cut(s) 718, 784, 809, 1526, 1652
Eco53kI GAGCTC 1 cut(s) 192
Eco57I CTGAAG 1 cut(s) 1008
Eco88I CYCGRG 1 cut(s) 1385
EcoICRI GAGCTC 1 cut(s) 192
EcoNI CCTNNNNNAGG 2 cut(s) 948, 1353
EcoO109I RGGNCCY 1 cut(s) 1652
EcoRII CCWGG 3 cut(s) 490, 780, 1354
EcoRV GATATC 1 cut(s) 727
EcoT14I CCWWGG 3 cut(s) 142, 268, 1369
EcoT22I ATGCAT 1 cut(s) 1279
EcoT38I GRGCYC 2 cut(s) 194, 935
ErhI CCWWGG 3 cut(s) 142, 268, 1369
FaeI CATG 7 cut(s) 488, 791, 847, 1055, 1178, 1340, 1573
FalI AAGNNNNNCTT 2 cut(s) 1011, 1043
FaqI GGGAC 2 cut(s) 704, 1638
FatI CATG 7 cut(s) 484, 787, 843, 1051, 1174, 1336, 1569
FauI CCCGC 2 cut(s) 366, 1169
FauNDI CATATG 2 cut(s) 1208, 1540
FblI GTMKAC 1 cut(s) 819
Fnu4HI GCNGC 4 cut(s) 107, 321, 688, 1461
FokI GGATG 4 cut(s) 661, 744, 966, 1338
FriOI GRGCYC 2 cut(s) 194, 935
Fsp4HI GCNGC 4 cut(s) 107, 321, 688, 1461
FspBI CTAG 4 cut(s) 99, 143, 330, 603
GluI GCNGC 4 cut(s) 107, 321, 688, 1461
GsaI CCCAGC 1 cut(s) 1124
GsuI CTGGAG 2 cut(s) 46, 969
HaeIII GGCC 4 cut(s) 106, 1119, 1140, 1663
HapII CCGG 4 cut(s) 86, 449, 892, 1310
Hin1II CATG 7 cut(s) 488, 791, 847, 1055, 1178, 1340, 1573
HincII GTYRAC 1 cut(s) 914
HindII GTYRAC 1 cut(s) 914
HpaII CCGG 4 cut(s) 86, 449, 892, 1310
HphI GGTGA 6 cut(s) 160, 172, 506, 1072, 1193, 1235
Hpy166II GTNNAC 4 cut(s) 497, 820, 914, 1318
Hpy188III TCNNGA 8 cut(s) 251, 746, 776, 973, 986, 1015, 1387, 1570
Hpy8I GTNNAC 4 cut(s) 497, 820, 914, 1318
HpyAV CCTTC 6 cut(s) 85, 248, 858, 902, 1643, 1679
HpyCH4III ACNGT 3 cut(s) 718, 817, 1509
HpyCH4IV ACGT 4 cut(s) 220, 692, 1047, 1148
HpyCH4V TGCA 7 cut(s) 320, 401, 690, 957, 1277, 1412, 1538
HpyF10VI GCNNNNNNNGC 1 cut(s) 344
HpyF3I CTNAG 5 cut(s) 558, 708, 1248, 1464, 1554
HpySE526I ACGT 4 cut(s) 220, 692, 1047, 1148
Hsp92II CATG 7 cut(s) 488, 791, 847, 1055, 1178, 1340, 1573
Kzo9I GATC 7 cut(s) 292, 532, 697, 748, 979, 1557, 1566
LmnI GCTCC 7 cut(s) 27, 94, 189, 624, 878, 1039, 1481
Lsp1109I GCAGC 3 cut(s) 332, 674, 1472
LweI GCATC 6 cut(s) 639, 722, 756, 944, 1264, 1286
MabI ACCWGGT 2 cut(s) 490, 780
MaeI CTAG 4 cut(s) 99, 143, 330, 603
MaeII ACGT 4 cut(s) 220, 692, 1047, 1148
MaeIII GTNAC 6 cut(s) 272, 455, 478, 654, 1149, 1503
MalI GATC 7 cut(s) 294, 534, 699, 750, 981, 1559, 1568
MboI GATC 7 cut(s) 292, 532, 697, 748, 979, 1557, 1566
MflI RGATCY 2 cut(s) 532, 979
MhlI GDGCHC 3 cut(s) 194, 629, 935
MluCI AATT 2 cut(s) 135, 1213
MlyI GAGTC 1 cut(s) 1404
MmeI TCCRAC 3 cut(s) 27, 776, 1553
Mph1103I ATGCAT 1 cut(s) 1279
MseI TTAA 4 cut(s) 737, 870, 921, 1113
MslI CAYNNNNRTG 4 cut(s) 1091, 1179, 1257, 1335
MspA1I CMGCKG 1 cut(s) 1463
MspI CCGG 4 cut(s) 86, 449, 892, 1310
MspR9I CCNGG 3 cut(s) 492, 782, 1356
MvaI CCWGG 3 cut(s) 492, 782, 1356
MvnI CGCG 1 cut(s) 764
MwoI GCNNNNNNNGC 1 cut(s) 344
NdeI CATATG 2 cut(s) 1208, 1540
NdeII GATC 7 cut(s) 292, 532, 697, 748, 979, 1557, 1566
NlaIII CATG 7 cut(s) 488, 791, 847, 1055, 1178, 1340, 1573
NlaIV GGNNCC 4 cut(s) 90, 720, 1527, 1654
NmuCI GTSAC 2 cut(s) 272, 654
NsiI ATGCAT 1 cut(s) 1279
NspI RCATGY 3 cut(s) 847, 1178, 1340
NspV TTCGAA 1 cut(s) 584
PagI TCATGA 1 cut(s) 1569
PciI ACATGT 1 cut(s) 1174
PcsI WCGNNNNNNNCGW 1 cut(s) 590
PflFI GACNNNGTC 1 cut(s) 782
PflMI CCANNNNNTGG 1 cut(s) 1067
PfoI TCCNGGA 1 cut(s) 1354
PinAI ACCGGT 1 cut(s) 891
PkrI GCNGC 4 cut(s) 108, 322, 689, 1462
PleI GAGTC 1 cut(s) 1403
PpsI GAGTC 1 cut(s) 1403
Ppu21I YACGTR 1 cut(s) 693
PpuMI RGGWCCY 1 cut(s) 1652
PscI ACATGT 1 cut(s) 1174
Psp124BI GAGCTC 1 cut(s) 194
Psp5II RGGWCCY 1 cut(s) 1652
Psp6I CCWGG 3 cut(s) 490, 780, 1354
PspFI CCCAGC 1 cut(s) 1120
PspGI CCWGG 3 cut(s) 490, 780, 1354
PspN4I GGNNCC 4 cut(s) 90, 720, 1527, 1654
PspPI GGNCC 7 cut(s) 718, 784, 809, 1118, 1526, 1652, 1661
PspPPI RGGWCCY 1 cut(s) 1652
PstNI CAGNNNCTG 1 cut(s) 1553
PsuI RGATCY 2 cut(s) 532, 979
PsyI GACNNNGTC 1 cut(s) 782
PvuII CAGCTG 1 cut(s) 1463
RsaI GTAC 6 cut(s) 315, 858, 890, 1319, 1364, 1424
RsaNI GTAC 6 cut(s) 314, 857, 889, 1318, 1363, 1423
RseI CAYNNNNRTG 4 cut(s) 1091, 1179, 1257, 1335
SacI GAGCTC 1 cut(s) 194
SaqAI TTAA 4 cut(s) 737, 870, 921, 1113
SatI GCNGC 4 cut(s) 107, 321, 688, 1461
Sau3AI GATC 7 cut(s) 292, 532, 697, 748, 979, 1557, 1566
Sau96I GGNCC 7 cut(s) 718, 784, 809, 1118, 1526, 1652, 1661
SchI GAGTC 1 cut(s) 1404
ScrFI CCNGG 3 cut(s) 492, 782, 1356
SduI GDGCHC 3 cut(s) 194, 629, 935
SexAI ACCWGGT 2 cut(s) 490, 780
SfaNI GCATC 6 cut(s) 639, 722, 756, 944, 1264, 1286
SfuI TTCGAA 1 cut(s) 584
SinI GGWCC 5 cut(s) 718, 784, 809, 1526, 1652
SmiMI CAYNNNNRTG 4 cut(s) 1091, 1179, 1257, 1335
SmlI CTYRAG 3 cut(s) 301, 569, 1013
SmoI CTYRAG 3 cut(s) 301, 569, 1013
Sse9I AATT 2 cut(s) 135, 1213
SsiI CCGC 5 cut(s) 107, 359, 791, 1162, 1204
SspMI CTAG 4 cut(s) 99, 143, 330, 603
SstI GAGCTC 1 cut(s) 194
StyD4I CCNGG 3 cut(s) 490, 780, 1354
StyI CCWWGG 3 cut(s) 142, 268, 1369
TaaI ACNGT 3 cut(s) 718, 817, 1509
TaiI ACGT 4 cut(s) 223, 695, 1050, 1151
TaqI TCGA 6 cut(s) 181, 584, 593, 777, 798, 935
TasI AATT 2 cut(s) 135, 1213
TatI WGTACW 4 cut(s) 313, 856, 1317, 1422
TauI GCSGC 1 cut(s) 109
Tru1I TTAA 4 cut(s) 737, 870, 921, 1113
Tru9I TTAA 4 cut(s) 737, 870, 921, 1113
TseFI GTSAC 2 cut(s) 272, 654
TseI GCWGC 3 cut(s) 320, 687, 1460
Tsp45I GTSAC 2 cut(s) 272, 654
TspDTI ATGAA 5 cut(s) 189, 501, 840, 1040, 1586
TspGWI ACGGA 1 cut(s) 1347
Tth111I GACNNNGTC 1 cut(s) 782
Van91I CCANNNNNTGG 1 cut(s) 1067
VpaK11BI GGWCC 5 cut(s) 718, 784, 809, 1526, 1652
XagI CCTNNNNNAGG 2 cut(s) 948, 1353
XceI RCATGY 3 cut(s) 847, 1178, 1340
XmaJI CCTAGG 1 cut(s) 142
XmiI GTMKAC 1 cut(s) 819
XspI CTAG 4 cut(s) 99, 143, 330, 603
Zsp2I ATGCAT 1 cut(s) 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.